CmaCh04G010760 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTGAAGAAATATTTTCAGGTAACCTTCTCTTGCATTCAAAGTTAGAACTAGAAGTCTGAGTAACTTTGTTCTAAGCCAAATGGCAAAACGAATACACCGTTATCATTTTTGCAGGCAGTCGTAACGGAGGAAGACGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTTGCATATTGTTAAACTCAAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCAAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCTGCTCACAATTGCACAATGATGGCTATAGCATTGATCGGTGCGCACCCCGCGTATGTGCCTCACATCCCCAATTCTATACGCACTTCTTAACGAATATCTCAATCGTCAACTGATATAGGAACGATATTGTGCAGATATGATCTAGGGCAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCAGTGATCAACTTGCGGAGATTATTTGCTAACAAGGGTTCAACGTTTATGGAATTGCAGAAGCAGAACGTCGAGAAAGCTCCGTCGAAGAAAAAGCTTACGATCGACACGATATTCTGATTCGTTTTCTTACATTCTTTAGTTATTTCCATGTATGTAAAGTTGGTCATGATGTCAATTCTTTTCTCCTCTCATATAAATCTTGCAAGCTTCAGTAAGATTCTGTGTAGAATGCAATTATATTAGCTATAATTTTTGTTTGTCATGAGGCTGTGAGAAGCGTTCTCTTAAGCTAAACTGGATGCTCGTTTTGGAGAACTTGGATATCTCGAGCGCTTAAGTCAAAGATTGCCGCTCAACAGG ATGAGTTTGAAGAAATATTTTCAGGCAGTCGTAACGGAGGAAGACGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTTGCATATTGTTAAACTCAAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCAAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCTGCTCACAATTGCACAATGATGGCTATAGCATTGATCGGTGCGCACCCCGCATATGATCTAGGGCAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCAGTGATCAACTTGCGGAGATTATTTGCTAACAAGGGTTCAACGTTTATGGAATTGCAGAAGCAGAACGTCGAGAAAGCTCCGTCGAAGAAAAAGCTTACGATCGACACGATATTCTGATTCGTTTTCTTACATTCTTTAGTTATTTCCATGTATGTAAAGTTGGTCATGATGTCAATTCTTTTCTCCTCTCATATAAATCTTGCAAGCTTCAGTAAGATTCTGTGTAGAATGCAATTATATTAGCTATAATTTTTGTTTGTCATGAGGCTGTGAGAAGCGTTCTCTTAAGCTAAACTGGATGCTCGTTTTGGAGAACTTGGATATCTCGAGCGCTTAAGTCAAAGATTGCCGCTCAACAGG ATGAGTTTGAAGAAATATTTTCAGGCAGTCGTAACGGAGGAAGACGGTATGGAGTCGATGGCTCATAGGTTTCTATCTGCTGCTGTGAAGGTAACGTCCGATTTGCATATTGTTAAACTCAAATATAATGGGAACCAAAAGCAGCATAGTTTTCATCGTTGCATTGGCGACGTTCATGAATGCGTATACCTATTGCAGCTGGATCAAAAGCCTTCCAAGTGTGTGGTGTTCGAGGATGATCCTCGAGGCATAACCGCTGCTCACAATTGCACAATGATGGCTATAGCATTGATCGGTGCGCACCCCGCATATGATCTAGGGCAGGCTGATCTTGCAGTTGCTAGCTTCAACGAGCTTTCAGTGATCAACTTGCGGAGATTATTTGCTAACAAGGGTTCAACGTTTATGGAATTGCAGAAGCAGAACGTCGAGAAAGCTCCGTCGAAGAAAAAGCTTACGATCGACACGATATTCTGA MSLKKYFQAVVTEEDGMESMAHRFLSAAVKVTSDLHIVKLKYNGNQKQHSFHRCIGDVHECVYLLQLDQKPSKCVVFEDDPRGITAAHNCTMMAIALIGAHPAYDLGQADLAVASFNELSVINLRRLFANKGSTFMELQKQNVEKAPSKKKLTIDTIF
BLAST of CmaCh04G010760 vs. TrEMBL
Match: A0A0A0KSI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218870 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 5.3e-45 Identity = 104/158 (65.82%), Postives = 114/158 (72.15%), Query Frame = 1
BLAST of CmaCh04G010760 vs. TrEMBL
Match: A0A0D3G3P7_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 6.9e-45 Identity = 96/158 (60.76%), Postives = 120/158 (75.95%), Query Frame = 1
BLAST of CmaCh04G010760 vs. TrEMBL
Match: A0A0D3G3P8_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 6.9e-45 Identity = 96/158 (60.76%), Postives = 120/158 (75.95%), Query Frame = 1
BLAST of CmaCh04G010760 vs. TrEMBL
Match: W9QLW0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012308 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 3.4e-44 Identity = 102/156 (65.38%), Postives = 112/156 (71.79%), Query Frame = 1
BLAST of CmaCh04G010760 vs. TrEMBL
Match: A0A151U963_CAJCA (Phosphorylated carbohydrates phosphatase TM_1254 OS=Cajanus cajan GN=KK1_020019 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.2e-43 Identity = 98/158 (62.03%), Postives = 112/158 (70.89%), Query Frame = 1
BLAST of CmaCh04G010760 vs. TAIR10
Match: AT3G10970.1 (AT3G10970.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 169.5 bits (428), Expect = 1.7e-42 Identity = 94/158 (59.49%), Postives = 108/158 (68.35%), Query Frame = 1
BLAST of CmaCh04G010760 vs. TAIR10
Match: AT4G11570.1 (AT4G11570.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-10 Identity = 33/91 (36.26%), Postives = 55/91 (60.44%), Query Frame = 1
BLAST of CmaCh04G010760 vs. NCBI nr
Match: gi|449457419|ref|XP_004146446.1| (PREDICTED: pseudouridine-5'-phosphatase [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 7.6e-45 Identity = 104/158 (65.82%), Postives = 114/158 (72.15%), Query Frame = 1
BLAST of CmaCh04G010760 vs. NCBI nr
Match: gi|700195544|gb|KGN50721.1| (hypothetical protein Csa_5G218870 [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 7.6e-45 Identity = 104/158 (65.82%), Postives = 114/158 (72.15%), Query Frame = 1
BLAST of CmaCh04G010760 vs. NCBI nr
Match: gi|659114142|ref|XP_008456924.1| (PREDICTED: uncharacterized protein LOC103496727 [Cucumis melo]) HSP 1 Score: 188.7 bits (478), Expect = 7.6e-45 Identity = 104/158 (65.82%), Postives = 114/158 (72.15%), Query Frame = 1
BLAST of CmaCh04G010760 vs. NCBI nr
Match: gi|1021467490|ref|XP_016182619.1| (PREDICTED: uncharacterized protein LOC107624677 isoform X1 [Arachis ipaensis]) HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44 Identity = 101/158 (63.92%), Postives = 112/158 (70.89%), Query Frame = 1
BLAST of CmaCh04G010760 vs. NCBI nr
Match: gi|1021467492|ref|XP_016182620.1| (PREDICTED: uncharacterized protein LOC107624677 isoform X2 [Arachis ipaensis]) HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44 Identity = 101/158 (63.92%), Postives = 112/158 (70.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |