CmaCh04G009560 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G009560
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Description1-acyl-sn-glycerol-3-phosphate acyltransferase
LocationCma_Chr04 : 4904371 .. 4906970 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAATTGATACTTTCTGGCTGCAAAGCCCTGGGGGCGATCTTCATTATTCTGTAAGTCCTATTCTTCTTTCTGCCGTAGATTCCAATTTTTTAATAGCATAAATCAGTGTAGTAGGAGATGCAGAGGATAATACGTTTGGCATAAGCGATTGCCTTGCATTTGATTTATATCATTTTACTTCTTATTTGGTTGTTGATGTGAAATGACATTGTCTGCTCTTCTTAAGTCTGGTTTTTCCCTTTAAAATAATATATACACTAATATCGGTTGTTTTCATCGTTGTTATTTGCTTGTTAAACCTTTGAACCATTTATTGTGTTGTAGCATCGGTATGAAGCCACCGTTTAGGTTGTTTTGAGGTCTCCTTGTAATCCTAGAAATGATTGTTTAGGTTTACTACGGTCAGTGACAATTTTTTTTATAGGAAACATGAAACCATTCATTGATCTAGGCAGTAGATACAAAAGTAAGTCCGCTCTGAGATAGTTACAAGAAAGGCCTCCATTGAGACGAGAGTCCATAAGCCTTAATTACAGAAAGGAGATAAAATACTCCAAGATAAAGCTAGATAATTAGACTAAAGGAAGGAGTGTGTGGCAAAGCTTCATGCTTGTGTAAATGCTGAAAGTCCTTTTTCACCCGGTCTAATAGCAATGAACTCGGAATGATACTAGAAAAAATGATTCAAAGAATCTTGATAGTAGTTCCATGAACAATTCTCTGTAGAATCTGATGAAATAGGGTGAATTGAGATGAACAATTCTCCGTGGAATCTGATGAAATAAGGTGAATTGAGAGATGAACAATTCCCTGTGGAACTTGATGAAATAGGGTAAATTGAGATGGTATTTTGTAAACACGTAATTATCTTGAATATATTAACTATTTCTTTATTTTCCGATCGCCTAGGAGGGACAAAAGAAACATATGGTTCTTTTTTCAACAATTTTTTATTTTTAGAGAACCTCTCAATAGGATTCGAATCCATAGGGCGCACACAAAGTCGAATATATCTACAATATAAATATTAGTTTTGTTTAAGTTTTTAGGTTCTTGAATTATTTATCTAAATTGAATGTCTTAGGAACTTCTTCCGTTCCCTTAAAGGGGTGATCCGCACATGATCTTATAAAATTATTTATAGCATTTTTCTTTTGATGCATTTTGAATTGTCAAATTTTGATTTTCTTAGTAACGGCTCCCATCTATATATTTAAATTTGTGAACATATCTCTTTAATTATTGTAATTTATTTGAATGCATCTATTTGTACCAATATATATATATATTCAGATCTAAAAAGTATGATATGATATGATAATTGAAATGTTAAAGTTGAGATGATGAGGAAGGCTCAATTCAAAGCATGAACAAAAGAAAATACAAATCCTACTTAAATATAGAGAATTAAAAATAATTGAATTCAATATCAAGAGTTTAAAATAATTTAGGTCAAGGGAAAATAAACAAAAAAATAAAATAGGTGAACCAATCGTTCTTGCTAGTTATATGAATGCCACGCGGACAGTGTAGATTAAAAAAGCTGGCCTACCAGAGAAGTTTCCAGATCCCACATTTTTTCAATGGAGATCTCCTGCATCTAATTAATTTATTTGTTTTTTCTTTCATTTTGCTATTATTTTCAATCCAATGTATGAGTAAATTCCAGTAGGTGGGGGAAAATGAGAAATCAAACATTATTATAAACTAGCTCAATAATTTCATTTAATAAATTTGACGGTAGGGGTGTGCAGAAATCGAGGCTCATCAAGCTAAGCTAATTGGTTTAATTCATATAGATCAATGATACGATGTTATTCACTTTGAACACAATTTTTTTAGACTGTTTAAGCGGGATGAAATTTAGTGTAAAATTGAAGAATGTGGGAAAAAAAAATTATGAGGAAAGGAAAATGATGAGAGAGAAAGAGAATGAGACATTCAAGTCAAAACATGTACAAGTCTTAACTACATTTCACAAATGGTCACTCATTCTTATCTATTTTTCTCTGTTTTCAATATTTGACAAAAAAAAATGAAATTTTAAATTTAAGAAAAGAACCATTTTTTATTACGAAGTTTCTTAGAATAAGGAAAGGAAAAGAAAGTTCTTCAAAAGCACTCCCAACTGGTAAGTAAAGTGCTTAAAAGTGCTGTTTGGTGAAAGGGAATGAGTTTCTCAATGAACTAACAATTTGTTGGTTCTTTTTTTAAGTAATCACTCTGAGTTTGGTGTTCTTCACTGTACAATTCATCCAGATAACAATCTGATATCATCCAAAGCTGCAGGGGGTATTGGCATAAACAAGATGGAGATGGAGAATCTTGGAGGTTCTTGTTTGAGGAGTACAAGGTTAGAGAGGTGGTTCGCTACAAGATATGAGCCAAATAAGAAAGAAGCCCCAAAATGTTCAGTTGATGAACAGATATCAAAAAAGGAGAAGGGTGATGATATATATGTGGATGATAATGGGTGGAGTTCTGTTCTGATATCATGTTTCAGAATTATCACCTGCTTTCTCACAATGATGGTTACTACTTTGTTTTGGGCTGATTATGCTTCTGCTCCTGCCATGGCCTTACCACAGGAATAG

mRNA sequence

ATGGAAAAATTGATACTTTCTGGCTGCAAAGCCCTGGGGGCGATCTTCATTATTCTCATCGGTATGAAGCCACCGTTTAGTGTAAAATTGAAGAATGTGGGAAAAAAAAATTATGAGGAAAGGAAAATGATGAGAGAGAAAGAGAATGAGACATTCAAGTCAAAACATAATAAGGAAAGGAAAAGAAAGTTCTTCAAAAGCACTCCCAACTGTAATCACTCTGAGTTTGGTGTTCTTCACTGTACAATTCATCCAGATAACAATCTGATATCATCCAAAGCTGCAGGGGGTATTGGCATAAACAAGATGGAGATGGAGAATCTTGGAGGTTCTTGTTTGAGGAGTACAAGGTTAGAGAGGTGGTTCGCTACAAGATATGAGCCAAATAAGAAAGAAGCCCCAAAATGTTCAGTTGATGAACAGATATCAAAAAAGGAGAAGGGTGATGATATATATGTGGATGATAATGGGTGGAGTTCTGTTCTGATATCATGTTTCAGAATTATCACCTGCTTTCTCACAATGATGGTTACTACTTTGTTTTGGGCTGATTATGCTTCTGCTCCTGCCATGGCCTTACCACAGGAATAG

Coding sequence (CDS)

ATGGAAAAATTGATACTTTCTGGCTGCAAAGCCCTGGGGGCGATCTTCATTATTCTCATCGGTATGAAGCCACCGTTTAGTGTAAAATTGAAGAATGTGGGAAAAAAAAATTATGAGGAAAGGAAAATGATGAGAGAGAAAGAGAATGAGACATTCAAGTCAAAACATAATAAGGAAAGGAAAAGAAAGTTCTTCAAAAGCACTCCCAACTGTAATCACTCTGAGTTTGGTGTTCTTCACTGTACAATTCATCCAGATAACAATCTGATATCATCCAAAGCTGCAGGGGGTATTGGCATAAACAAGATGGAGATGGAGAATCTTGGAGGTTCTTGTTTGAGGAGTACAAGGTTAGAGAGGTGGTTCGCTACAAGATATGAGCCAAATAAGAAAGAAGCCCCAAAATGTTCAGTTGATGAACAGATATCAAAAAAGGAGAAGGGTGATGATATATATGTGGATGATAATGGGTGGAGTTCTGTTCTGATATCATGTTTCAGAATTATCACCTGCTTTCTCACAATGATGGTTACTACTTTGTTTTGGGCTGATTATGCTTCTGCTCCTGCCATGGCCTTACCACAGGAATAG

Protein sequence

MEKLILSGCKALGAIFIILIGMKPPFSVKLKNVGKKNYEERKMMREKENETFKSKHNKERKRKFFKSTPNCNHSEFGVLHCTIHPDNNLISSKAAGGIGINKMEMENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLISCFRIITCFLTMMVTTLFWADYASAPAMALPQE
BLAST of CmaCh04G009560 vs. TrEMBL
Match: A0A0A0L6B4_CUCSA (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_3G077660 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-21
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 1

Query: 105 MENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLIS 164
           MEN G + LRS RLE +F T  EPNK+E PK SVDEQI K+EK  DIY+DDNGWSSVLIS
Sbjct: 1   MENFGAASLRSRRLESYFNTSSEPNKREVPKYSVDEQIPKREK-TDIYLDDNGWSSVLIS 60

Query: 165 CFRIITCFLTMMVTTLFWA 184
           CFR + CFLTMMVTT  WA
Sbjct: 61  CFRTVFCFLTMMVTTFVWA 78

BLAST of CmaCh04G009560 vs. TrEMBL
Match: A0A067KSK2_JATCU (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Jatropha curcas GN=JCGZ_00879 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 1

Query: 105 MENLG-GSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLI 164
           MEN G GS +R+ RLE +  T   PN K+ PK SV E++ ++ K D +YVDD+GW   LI
Sbjct: 1   MENTGSGSFMRNRRLESFLTTNSIPNVKKNPKESVREEVEQRHKSD-VYVDDDGWVPALI 60

Query: 165 SCFRIITCFLTMMVTTLFWA 184
           SC RI+ CF++MMVTT  WA
Sbjct: 61  SCVRIVVCFVSMMVTTFIWA 79

BLAST of CmaCh04G009560 vs. TrEMBL
Match: B9I0E6_POPTR (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Populus trichocarpa GN=POPTR_0011s14220g PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12
Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 1

Query: 109 GGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLISCFRI 168
           GGS +R+ RLE +  T   PN K+ PK  V E++ K  K D +YV+D+GW S LISC RI
Sbjct: 6   GGSFMRNRRLESFLDTNSTPNGKQTPKILVREEVVKSPKSD-VYVEDDGWISALISCVRI 65

Query: 169 ITCFLTMMVTTLFWA 184
           + CFL+MMVTT  W+
Sbjct: 66  VVCFLSMMVTTFIWS 79

BLAST of CmaCh04G009560 vs. TrEMBL
Match: A0A061F6P9_THECC (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Theobroma cacao GN=TCM_030900 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-10
Identity = 40/80 (50.00%), Postives = 49/80 (61.25%), Query Frame = 1

Query: 105 MENLG-GSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLI 164
           ME+ G GS LR+ RL  +  T  +PN +E  K S      +  K DD +VDD+GW   LI
Sbjct: 1   MESSGSGSFLRNRRLGSFLDTNSDPNVRETQKVSSKGGARQSPKTDDAFVDDDGWICSLI 60

Query: 165 SCFRIITCFLTMMVTTLFWA 184
           SC RI+ CFLTMMVTT  WA
Sbjct: 61  SCVRIVACFLTMMVTTFIWA 80

BLAST of CmaCh04G009560 vs. TrEMBL
Match: A0A0B0MTT9_GOSAR (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Gossypium arboreum GN=F383_29995 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-09
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1

Query: 105 MEN-LGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGD-DIYVDDNGWSSVL 164
           MEN   GS LR+ RLE +  T+  PN +E  K    + I+++     D +VDD+GW   L
Sbjct: 1   MENSASGSFLRNRRLESFLETKSGPNVRETQKIPSKQVITRQRPNKTDAFVDDDGWIPTL 60

Query: 165 ISCFRIITCFLTMMVTTLFWA 184
           ISC RI+TCFL MMVTT  WA
Sbjct: 61  ISCVRIVTCFLAMMVTTFIWA 81

BLAST of CmaCh04G009560 vs. NCBI nr
Match: gi|449470469|ref|XP_004152939.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 2.5e-21
Identity = 56/79 (70.89%), Postives = 62/79 (78.48%), Query Frame = 1

Query: 105 MENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLIS 164
           MEN G + LRS RLE +F T  EPNK+E PK SVDEQI K+EK  DIY+DDNGWSSVLIS
Sbjct: 1   MENFGAASLRSRRLESYFNTSSEPNKREVPKYSVDEQIPKREK-TDIYLDDNGWSSVLIS 60

Query: 165 CFRIITCFLTMMVTTLFWA 184
           CFR + CFLTMMVTT  WA
Sbjct: 61  CFRTVFCFLTMMVTTFVWA 78

BLAST of CmaCh04G009560 vs. NCBI nr
Match: gi|659126898|ref|XP_008463419.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucumis melo])

HSP 1 Score: 107.1 bits (266), Expect = 3.6e-20
Identity = 55/79 (69.62%), Postives = 60/79 (75.95%), Query Frame = 1

Query: 105 MENLGGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLIS 164
           MEN G + LRS RLE +  T  EP K+E PK SVDEQI K EK  DIYVDDNGWSSVL+S
Sbjct: 1   MENFGAASLRSRRLESYINTSSEPIKREVPKYSVDEQIPKSEK-TDIYVDDNGWSSVLVS 60

Query: 165 CFRIITCFLTMMVTTLFWA 184
           CFRI+ CFLTMMVTT  WA
Sbjct: 61  CFRIVFCFLTMMVTTFVWA 78

BLAST of CmaCh04G009560 vs. NCBI nr
Match: gi|743860180|ref|XP_011030791.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Populus euphratica])

HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12
Identity = 40/75 (53.33%), Postives = 52/75 (69.33%), Query Frame = 1

Query: 109 GGSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLISCFRI 168
           GGS +R+ RLE +F T   PN K+ P   V E++ K  K D +YV+D+GW SVLISC RI
Sbjct: 6   GGSFMRNRRLESFFDTNSTPNGKQTPNIWVREEVVKSPKSD-VYVEDDGWISVLISCVRI 65

Query: 169 ITCFLTMMVTTLFWA 184
           + CFL+MMVTT  W+
Sbjct: 66  VVCFLSMMVTTFIWS 79

BLAST of CmaCh04G009560 vs. NCBI nr
Match: gi|802588299|ref|XP_012070810.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatropha curcas])

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 1

Query: 105 MENLG-GSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLI 164
           MEN G GS +R+ RLE +  T   PN K+ PK SV E++ ++ K D +YVDD+GW   LI
Sbjct: 1   MENTGSGSFMRNRRLESFLTTNSIPNVKKNPKESVREEVEQRHKSD-VYVDDDGWVPALI 60

Query: 165 SCFRIITCFLTMMVTTLFWA 184
           SC RI+ CF++MMVTT  WA
Sbjct: 61  SCVRIVVCFVSMMVTTFIWA 79

BLAST of CmaCh04G009560 vs. NCBI nr
Match: gi|802588307|ref|XP_012070815.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X2 [Jatropha curcas])

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12
Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 1

Query: 105 MENLG-GSCLRSTRLERWFATRYEPNKKEAPKCSVDEQISKKEKGDDIYVDDNGWSSVLI 164
           MEN G GS +R+ RLE +  T   PN K+ PK SV E++ ++ K D +YVDD+GW   LI
Sbjct: 1   MENTGSGSFMRNRRLESFLTTNSIPNVKKNPKESVREEVEQRHKSD-VYVDDDGWVPALI 60

Query: 165 SCFRIITCFLTMMVTTLFWA 184
           SC RI+ CF++MMVTT  WA
Sbjct: 61  SCVRIVVCFVSMMVTTFIWA 79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L6B4_CUCSA1.7e-2170.891-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_3G07766... [more]
A0A067KSK2_JATCU1.5e-1252.501-acyl-sn-glycerol-3-phosphate acyltransferase OS=Jatropha curcas GN=JCGZ_00879 ... [more]
B9I0E6_POPTR3.3e-1252.001-acyl-sn-glycerol-3-phosphate acyltransferase OS=Populus trichocarpa GN=POPTR_0... [more]
A0A061F6P9_THECC4.0e-1050.001-acyl-sn-glycerol-3-phosphate acyltransferase OS=Theobroma cacao GN=TCM_030900 ... [more]
A0A0B0MTT9_GOSAR2.0e-0948.151-acyl-sn-glycerol-3-phosphate acyltransferase OS=Gossypium arboreum GN=F383_299... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|449470469|ref|XP_004152939.1|2.5e-2170.89PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucumis sativus][more]
gi|659126898|ref|XP_008463419.1|3.6e-2069.62PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Cucumis melo][more]
gi|743860180|ref|XP_011030791.1|1.6e-1253.33PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like [Populus euphrati... [more]
gi|802588299|ref|XP_012070810.1|2.1e-1252.50PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X1 [Jatro... [more]
gi|802588307|ref|XP_012070815.1|2.1e-1252.50PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase-like isoform X2 [Jatro... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0043484 regulation of RNA splicing
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0005730 nucleolus
molecular_function GO:0016746 transferase activity, transferring acyl groups
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004386 helicase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G009560.1CmaCh04G009560.1mRNA