CmaCh04G009400 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G009400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Albumin seed storage protein
Location	Cma_Chr04 : 4840990 .. 4841852 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGCCCTCTTCACCACCATAATCTTCATACTCAACGTTAACAATGGCCAGACACCCATTTTCCCTCCTCCTCCTCCTCTCCCTCTTCCTCCTCGCCGCCTCCGCCCTCCGCTTCCACGATGACAACCAAAATCCTTGGCTGCAGAGGTGCCGCCAACAGGTTCTTTGAACACAAGCTCTTATCTCAAAAAATTTCTATATTCTCTAAATTAAAGTCCATTAACCTGATAATGGAGGTAATATTTTCTAATTAAAGACTTCATAATGGAGATAATAAATATATTTATTGATTATATAAATGTATGATCAATCTCTAAATTAGAATGAGCAGATGTGGGACTTTGGTCCCATAATTATATTTACAATTTTGTTGAAATGATACAGGTTAGGGGGGAGCGGCTCCGCCACTGCGAGCAGCTGCTGATGAGGCCGCGCCGCGTCCGCCAGCTTTTAATGGCTGAAGAAGAAGAAGATGCAGTGGAGCACCTGGAGGAGTGCTGCCAGCAGCTACGGGGAATGGACGACGCGTGCCGGTGCGAAGGGCTGCGGCAGATCGTGCAGCGACGTAGACAGCAAGGGAGAATGCAAGGGATCGACGTTGGGCAAATGCTGGAGAGAGCTACGAACTTGCCGTCAGTCTGTAGGCTCAGCCAACGCCGCTGCGAACTCCGCTCCTCCCGGTGGTAGAATGGTAGAATGAGAAAGAAAATGAGAGCCCATTGAGGTGAAAAACTGAAAAATGGAGTAATAATCAATAAAATGTGACAGCTCCTCGTCTTAGTGGGAGATGTGTACTACTGTTTAAAGTAACGTCCCTTGCCGTTTTTTCTTTTTTTCTTTTTCTTTTTGTGGAATAAAATGTCG

mRNA sequence

CCGCCCTCTTCACCACCATAATCTTCATACTCAACGTTAACAATGGCCAGACACCCATTTTCCCTCCTCCTCCTCCTCTCCCTCTTCCTCCTCGCCGCCTCCGCCCTCCGCTTCCACGATGACAACCAAAATCCTTGGCTGCAGAGGTGCCGCCAACAGGTTAGGGGGGAGCGGCTCCGCCACTGCGAGCAGCTGCTGATGAGGCCGCGCCGCGTCCGCCAGCTTTTAATGGCTGAAGAAGAAGAAGATGCAGTGGAGCACCTGGAGGAGTGCTGCCAGCAGCTACGGGGAATGGACGACGCGTGCCGGTGCGAAGGGCTGCGGCAGATCGTGCAGCGACGTAGACAGCAAGGGAGAATGCAAGGGATCGACGTTGGGCAAATGCTGGAGAGAGCTACGAACTTGCCGTCAGTCTGTAGGCTCAGCCAACGCCGCTGCGAACTCCGCTCCTCCCGGTGGTAGAATGGTAGAATGAGAAAGAAAATGAGAGCCCATTGAGGTGAAAAACTGAAAAATGGAGTAATAATCAATAAAATGTGACAGCTCCTCGTCTTAGTGGGAGATGTGTACTACTGTTTAAAGTAACGTCCCTTGCCGTTTTTTCTTTTTTTCTTTTTCTTTTTGTGGAATAAAATGTCG

Coding sequence (CDS)

ATGGCCAGACACCCATTTTCCCTCCTCCTCCTCCTCTCCCTCTTCCTCCTCGCCGCCTCCGCCCTCCGCTTCCACGATGACAACCAAAATCCTTGGCTGCAGAGGTGCCGCCAACAGGTTAGGGGGGAGCGGCTCCGCCACTGCGAGCAGCTGCTGATGAGGCCGCGCCGCGTCCGCCAGCTTTTAATGGCTGAAGAAGAAGAAGATGCAGTGGAGCACCTGGAGGAGTGCTGCCAGCAGCTACGGGGAATGGACGACGCGTGCCGGTGCGAAGGGCTGCGGCAGATCGTGCAGCGACGTAGACAGCAAGGGAGAATGCAAGGGATCGACGTTGGGCAAATGCTGGAGAGAGCTACGAACTTGCCGTCAGTCTGTAGGCTCAGCCAACGCCGCTGCGAACTCCGCTCCTCCCGGTGGTAG

Protein sequence

MARHPFSLLLLLSLFLLAASALRFHDDNQNPWLQRCRQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCELRSSRW

Homology

[Close]

BLAST of CmaCh04G009400 vs. Swiss-Prot
Match: 2SS2_BEREX (2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa GN=BE2S2 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-12
Identity = 42/108 (38.89%), Postives = 66/108 (61.11%), Query Frame = 1


Query: 34  QRCRQQV-RGERLRHCEQLLMRP------RRVRQLLMAEEEEDAVEHLEECCQQLRGMDD 93
           Q+CR+Q+ R ++L HC   L +       +  R L   EE      HL+ECC+QL  MD+
Sbjct: 45  QQCREQMERQQQLNHCRMYLRQQMEESPYQNPRPLRRGEEP-----HLDECCEQLERMDE 104

Query: 94  ACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCEL 135
            CRCEGLR +++R+R++  +QG  + +++ +A NL S C LS +RC +
Sbjct: 105 MCRCEGLRMMLRRQREEMELQGEQMQRIMRKAENLLSRCNLSPQRCPM 147

[Close]

BLAST of CmaCh04G009400 vs. Swiss-Prot
Match: 2SS1_BEREX (2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa GN=BE2S1 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 46/138 (33.33%), Postives = 75/138 (54.35%), Query Frame = 1


Query: 7   SLLLLLSL-----FLLAASALRFHDDNQNPWLQRCRQQV-RGERLRHCEQLLMRPRRVRQ 66
           +LL+L++L     F    +     ++NQ    + CR+Q+ R + L HC ++ MR +    
Sbjct: 10  ALLVLMALGHATAFRATVTTTVVEEENQ----EECREQMQRQQMLSHC-RMYMRQQMEES 69

Query: 67  LLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQG-RMQGIDVGQMLERAT 126
                       H+ ECC+QL GMD++CRCEGLR ++ R +Q+  + +G  + +M+  A 
Sbjct: 70  PYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMMRMQQEEMQPRGEQMRRMMRLAE 129

Query: 127 NLPSVCRLSQRRCELRSS 138
           N+PS C LS  RC +  S
Sbjct: 130 NIPSRCNLSPMRCPMGGS 142

[Close]

BLAST of CmaCh04G009400 vs. Swiss-Prot
Match: 2SS_CUCMA (2S albumin OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 45/137 (32.85%), Postives = 74/137 (54.01%), Query Frame = 1


Query: 7   SLLLLLSLFLLAASALRFH--------DDNQNPWLQRCRQQVRGERLRHCEQLLMRPRRV 66
           S++ L ++ LL A A  +         ++N+    +RCRQ    E LR CEQ L +  R 
Sbjct: 6   SIIALFAVALLVADAYAYRTTITTVEVEENRQGREERCRQMSAREELRSCEQYLRQQSRD 65

Query: 67  RQLLMAEEEEDAVE--HLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLE 126
              +   E     E    +ECC++L+ +D+ CRC+ L +I +  ++Q R  G +  QML+
Sbjct: 66  VLQMRGIENPWRREGGSFDECCRELKNVDEECRCDMLEEIAREEQRQAR--GQEGRQMLQ 125

Query: 127 RATNLPSVCRLSQRRCE 134
           +A NLPS+C +  +RC+
Sbjct: 126 KARNLPSMCGIRPQRCD 140

[Close]

BLAST of CmaCh04G009400 vs. Swiss-Prot
Match: 2SS_RICCO (2S albumin OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 4.1e-10
Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = 1


Query: 30  NPWLQRCRQQVRGER-LRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGMDDAC 89
           NP  Q CR Q++ ++ LR C++ + +    +    ++ +E +   L  CC  L+ M   C
Sbjct: 156 NPSQQGCRGQIQEQQNLRQCQEYIKQQVSGQGPRRSDNQERS---LRGCCDHLKQMQSQC 215

Query: 90  RCEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRC 133
           RCEGLRQ +++++ QG++QG DV +    A NLPS+C +S   C
Sbjct: 216 RCEGLRQAIEQQQSQGQLQGQDVFEAFRTAANLPSMCGVSPTEC 256

[Close]

BLAST of CmaCh04G009400 vs. Swiss-Prot
Match: 2SS5_HELAN (2S seed storage protein OS=Helianthus annuus GN=HAG5 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.0e-08
Identity = 35/123 (28.46%), Postives = 64/123 (52.03%), Query Frame = 1


Query: 26  DDNQNPWLQRCRQQVRGERLRHCEQLLMR----PRRVRQLLMAEEEEDAVEHLEECCQQL 85
           D+N     ++  Q+++G+RL  C   L +    PR      M  ++E   + L++CCQ+L
Sbjct: 31  DENPISGQRQVSQRIQGQRLNQCRMFLQQGQNIPREFDNPQMGRQQE---QQLQQCCQEL 90

Query: 86  RGMDDACRCEGLRQIVQRRRQQGRMQ----------GIDVGQMLERATNLPSVCRLSQRR 135
           + ++  C+CE ++Q+ +  +QQ + Q               Q+ ++A  LP+VC L  RR
Sbjct: 91  QNIEGQCQCEAVKQVFREAQQQVQQQQGRQLVPFRGSQQTQQLKQKAQILPNVCNLQSRR 150

[Close]

BLAST of CmaCh04G009400 vs. TrEMBL
Match: A0A0A0L7P7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G078820 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.2e-50
Identity = 110/142 (77.46%), Postives = 125/142 (88.03%), Query Frame = 1


Query: 1   MARHPFSLLLLLSLFL--LAASALRFHDDNQN--PWLQRCRQQVR-GERLRHCEQLLMRP 60
           M+  P   +LLLSLFL  +AAS  +F DDNQ+  PWLQRCRQQ+R GERLRHCE+LL +P
Sbjct: 1   MSTKPLVSILLLSLFLFAVAASDHQFDDDNQSQRPWLQRCRQQIRSGERLRHCERLLTQP 60

Query: 61  RRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQML 120
           RR R LL AEEEEDAVEHLEECCQQL+GMDDACRCEGLRQIVQRRRQQG++QG+DVGQML
Sbjct: 61  RRFRLLLAAEEEEDAVEHLEECCQQLKGMDDACRCEGLRQIVQRRRQQGQLQGVDVGQML 120

Query: 121 ERATNLPSVCRLSQRRCELRSS 138
           ERATNLPSVCRLS+RRC+LRS+
Sbjct: 121 ERATNLPSVCRLSRRRCDLRST 142

[Close]

BLAST of CmaCh04G009400 vs. TrEMBL
Match: A0A059BVJ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03431 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.3e-15
Identity = 43/101 (42.57%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 34  QRCRQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGL 93
           Q+CRQ++  ++L  CEQ + + R          EE     L++CCQQLR +D  CRCEGL
Sbjct: 49  QQCRQRILRQQLHKCEQFITQGRH---------EEGGQGSLQQCCQQLRQIDQQCRCEGL 108

Query: 94  RQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCEL 135
           +QIVQ ++QQG++QG ++ +++++A NLP++CRL  +RC++
Sbjct: 109 KQIVQEQQQQGQLQGQELREVVQKAQNLPNMCRLGPQRCDI 140

[Close]

BLAST of CmaCh04G009400 vs. TrEMBL
Match: Q8VX62_SESIN (Precursor of thiamin-binding protein OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-13
Identity = 46/133 (34.59%), Postives = 76/133 (57.14%), Query Frame = 1


Query: 1   MARHPFSLLLLLSLFLLAASALRFHDDNQNPWLQRCRQQVRGERLRHCEQLLMRPRRVRQ 60
           MAR    ++L+  + +L A+A      N     QRCRQQ+  +RL  C + L+   R   
Sbjct: 1   MARFSACMVLIALIIVLLAAATTAEIVNPGRESQRCRQQIERQRLSSCREYLIDSSRPVM 60

Query: 61  LLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERATN 120
           +    +     E    CC++L  +D+ CRC+ ++Q+VQ+ RQ G +QG ++ +ML+ A +
Sbjct: 61  MEGGNQGRSWREEFPRCCEELERIDEQCRCQAVQQVVQQERQGGELQGRELQEMLQTAQS 120

Query: 121 LPSVCRLSQRRCE 134
           LPS+CR+S R C+
Sbjct: 121 LPSLCRISPRYCQ 133

[Close]

BLAST of CmaCh04G009400 vs. TrEMBL
Match: P93198_9ROSI (Albumin seed storage protein (Fragment) OS=Juglans regia PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-13
Identity = 51/139 (36.69%), Postives = 84/139 (60.43%), Query Frame = 1


Query: 9   LLLLSLFLLAASALR-------FHDDNQNPWL--QRCRQQV-RGERLRHCEQLLMRPRRV 68
           LL+  LF+  A+A R         +D  NP    + CR+Q+ R + L HC+  L +  R 
Sbjct: 3   LLVALLFVANAAAFRTTITTMEIDEDIDNPRRRGEGCREQIQRQQNLNHCQYYLRQQSRS 62

Query: 69  RQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQMLERA 128
                  +E++  +H  +CCQQL  MD+ C+CEGLRQ+V+R++QQ  ++G ++ +M++ A
Sbjct: 63  G----GYDEDNQRQHFRQCCQQLSQMDEQCQCEGLRQVVRRQQQQQGLRGEEMEEMVQSA 122

Query: 129 TNLPSVCRLSQRRCELRSS 138
            +LP+ C +S +RCE+R S
Sbjct: 123 RDLPNECGISSQRCEIRRS 137

[Close]

BLAST of CmaCh04G009400 vs. TrEMBL
Match: K4CP49_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-13
Identity = 47/115 (40.87%), Postives = 70/115 (60.87%), Query Frame = 1


Query: 26  DDNQNPWLQRCRQQVR-GERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGM 85
           +D  NP  Q C+QQ +  ++LR C+Q L      RQ     E++     +++CC QL  +
Sbjct: 33  EDALNPQTQSCQQQFQQAQQLRSCQQFL------RQRSQQYEDQQIPRDVQQCCNQLEQI 92

Query: 86  DDA-CRCEGLRQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCELRSSR 139
            D  CRCEGL ++VQ+  Q G++QG    QML+ A NLP +CRLS +RCE+++ R
Sbjct: 93  QDPQCRCEGLMKVVQQEEQTGKVQGRQRQQMLQTAENLPGLCRLSPQRCEIQTVR 141

[Close]

BLAST of CmaCh04G009400 vs. NCBI nr
Match: gi|659126944|ref|XP_008463441.1| (PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 2.8e-51
Identity = 111/142 (78.17%), Postives = 125/142 (88.03%), Query Frame = 1


Query: 1   MARHPFSLLLLLSLFLLAASAL--RFHDDNQN--PWLQRCRQQVRG-ERLRHCEQLLMRP 60
           M+  P   +LLLSLFLLA +A   +F D+NQ   PWLQRCRQQ+RG ERLRHCE+LL RP
Sbjct: 34  MSTKPLVSILLLSLFLLAVAASDHQFDDENQRQRPWLQRCRQQIRGGERLRHCERLLTRP 93

Query: 61  RRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQML 120
           RR RQLL AEEEEDAVEHLEECCQQLRGMDDACRCEGLRQI+QRRRQQG++QG+DVGQML
Sbjct: 94  RRFRQLLAAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIIQRRRQQGQLQGMDVGQML 153

Query: 121 ERATNLPSVCRLSQRRCELRSS 138
           ERATNLPSVCRLS+RRC+LRS+
Sbjct: 154 ERATNLPSVCRLSRRRCDLRST 175

[Close]

BLAST of CmaCh04G009400 vs. NCBI nr
Match: gi|700201018|gb|KGN56151.1| (hypothetical protein Csa_3G078820 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 3.1e-50
Identity = 110/142 (77.46%), Postives = 125/142 (88.03%), Query Frame = 1


Query: 1   MARHPFSLLLLLSLFL--LAASALRFHDDNQN--PWLQRCRQQVR-GERLRHCEQLLMRP 60
           M+  P   +LLLSLFL  +AAS  +F DDNQ+  PWLQRCRQQ+R GERLRHCE+LL +P
Sbjct: 1   MSTKPLVSILLLSLFLFAVAASDHQFDDDNQSQRPWLQRCRQQIRSGERLRHCERLLTQP 60

Query: 61  RRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGLRQIVQRRRQQGRMQGIDVGQML 120
           RR R LL AEEEEDAVEHLEECCQQL+GMDDACRCEGLRQIVQRRRQQG++QG+DVGQML
Sbjct: 61  RRFRLLLAAEEEEDAVEHLEECCQQLKGMDDACRCEGLRQIVQRRRQQGQLQGVDVGQML 120

Query: 121 ERATNLPSVCRLSQRRCELRSS 138
           ERATNLPSVCRLS+RRC+LRS+
Sbjct: 121 ERATNLPSVCRLSRRRCDLRST 142

[Close]

BLAST of CmaCh04G009400 vs. NCBI nr
Match: gi|702387119|ref|XP_010064931.1| (PREDICTED: 2S albumin [Eucalyptus grandis])

HSP 1 Score: 93.6 bits (231), Expect = 2.9e-16
Identity = 43/101 (42.57%), Postives = 74/101 (73.27%), Query Frame = 1


Query: 34  QRCRQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGL 93
           Q+CRQ++  ++L  CEQ + + R +  +++   EE     L++CCQQLR +D  CRCEGL
Sbjct: 49  QQCRQRILRQQLHKCEQFITQGRGL--IVLPRHEEGGQGSLQQCCQQLRQIDQQCRCEGL 108

Query: 94  RQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCEL 135
           +QIVQ ++QQG++QG ++ +++++A NLP++CRL  +RC++
Sbjct: 109 KQIVQEQQQQGQLQGQELREVVQKAQNLPNMCRLGPQRCDI 147

[Close]

BLAST of CmaCh04G009400 vs. NCBI nr
Match: gi|629104668|gb|KCW70137.1| (hypothetical protein EUGRSUZ_F03431 [Eucalyptus grandis])

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-15
Identity = 43/101 (42.57%), Postives = 70/101 (69.31%), Query Frame = 1


Query: 34  QRCRQQVRGERLRHCEQLLMRPRRVRQLLMAEEEEDAVEHLEECCQQLRGMDDACRCEGL 93
           Q+CRQ++  ++L  CEQ + + R          EE     L++CCQQLR +D  CRCEGL
Sbjct: 49  QQCRQRILRQQLHKCEQFITQGRH---------EEGGQGSLQQCCQQLRQIDQQCRCEGL 108

Query: 94  RQIVQRRRQQGRMQGIDVGQMLERATNLPSVCRLSQRRCEL 135
           +QIVQ ++QQG++QG ++ +++++A NLP++CRL  +RC++
Sbjct: 109 KQIVQEQQQQGQLQGQELREVVQKAQNLPNMCRLGPQRCDI 140

[Close]

BLAST of CmaCh04G009400 vs. NCBI nr
Match: gi|698561748|ref|XP_009772214.1| (PREDICTED: 2S sulfur-rich seed storage protein 2-like [Nicotiana sylvestris])

HSP 1 Score: 90.1 bits (222), Expect = 3.2e-15
Identity = 54/141 (38.30%), Postives = 90/141 (63.83%), Query Frame = 1


Query: 7   SLLLLLSLFLLAAS---ALRFHDDNQNPWLQRCRQQVR-GERLRHCEQLLMRPRRVRQLL 66
           SL +L     +++S   ++   ++ +N   +RC+QQ++  ++LR C+Q L      RQ  
Sbjct: 11  SLAILFMAITVSSSRTISITVSEEVENQQSRRCQQQIQQAQQLRSCQQYL------RQRS 70

Query: 67  MAEEEEDAVEH---LEECCQQLRGMDDA-CRCEGLRQIVQRRRQQGRMQGIDVGQMLERA 126
            + EEE+A +    ++ CCQQL+ + D  CRCEGLRQ+VQ+ +Q+G +QG +  QML+ A
Sbjct: 71  QSSEEEEADQSRGDIQRCCQQLQQIQDPQCRCEGLRQVVQQEQQRGELQGRERQQMLQTA 130

Query: 127 TNLPSVCRLSQRRCELRSSRW 140
            NLP +CR+S +RCE+++  W
Sbjct: 131 QNLPGLCRVSPQRCEIQTRSW 145

The following BLAST results are available for this feature:

BLAST of CmaCh04G009400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
2SS2_BEREX	3.4e-12	38.89	2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa GN=BE2S2 PE=3 SV=1	[more]
2SS1_BEREX	1.4e-10	33.33	2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa GN=BE2S1 PE=1 SV=2	[more]
2SS_CUCMA	2.4e-10	32.85	2S albumin OS=Cucurbita maxima PE=1 SV=1	[more]
2SS_RICCO	4.1e-10	35.58	2S albumin OS=Ricinus communis PE=1 SV=2	[more]
2SS5_HELAN	5.0e-08	28.46	2S seed storage protein OS=Helianthus annuus GN=HAG5 PE=1 SV=1	[more]

BLAST of CmaCh04G009400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7P7_CUCSA	2.2e-50	77.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G078820 PE=4 SV=1	[more]
A0A059BVJ1_EUCGR	2.3e-15	42.57	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F03431 PE=4 SV=1	[more]
Q8VX62_SESIN	1.2e-13	34.59	Precursor of thiamin-binding protein OS=Sesamum indicum PE=2 SV=1	[more]
P93198_9ROSI	2.8e-13	36.69	Albumin seed storage protein (Fragment) OS=Juglans regia PE=2 SV=1	[more]
K4CP49_SOLLC	3.6e-13	40.87	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of CmaCh04G009400 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh04G009400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659126944\|ref\|XP_008463441.1\|	2.8e-51	78.17	PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo]	[more]
gi\|700201018\|gb\|KGN56151.1\|	3.1e-50	77.46	hypothetical protein Csa_3G078820 [Cucumis sativus]	[more]
gi\|702387119\|ref\|XP_010064931.1\|	2.9e-16	42.57	PREDICTED: 2S albumin [Eucalyptus grandis]	[more]
gi\|629104668\|gb\|KCW70137.1\|	3.2e-15	42.57	hypothetical protein EUGRSUZ_F03431 [Eucalyptus grandis]	[more]
gi\|698561748\|ref\|XP_009772214.1\|	3.2e-15	38.30	PREDICTED: 2S sulfur-rich seed storage protein 2-like [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000617	Napin
IPR016140	Bifunc_inhib/LTP/seed_store

Vocabulary: **Molecular Function**
Term	Definition
GO:0045735	nutrient reservoir activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0045735	nutrient reservoir activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G009400.1	CmaCh04G009400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000617	Napin/ Bra allergen	PRINTS	PR00496	NAPIN	coord: 111..125 score: 5.2E-5coord: 34..55 score: 5.2E-5coord: 76..93 score: 5.2E-5coord: 93..106 score: 5.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 48..131 score: 1.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 48..132 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 11..132 score: 6.43
None	No IPR available	unknown	Coil	Coil	coord: 64..84 scor
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 71..135 score: 1.3
None	No IPR available	PANTHER	PTHR35496	FAMILY NOT NAMED	coord: 1..139 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G009400	Cla005282	Watermelon (97103) v1	cmawmB659
CmaCh04G009400	Csa3G078820	Cucumber (Chinese Long) v2	cmacuB702
CmaCh04G009400	ClCG10G005660	Watermelon (Charleston Gray)	cmawcgB614
CmaCh04G009400	CSPI03G05350	Wild cucumber (PI 183967)	cmacpiB710
CmaCh04G009400	CmoCh04G010100	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G009400	Lsi05G006230	Bottle gourd (USVL1VR-Ls)	cmalsiB691
CmaCh04G009400	MELO3C032238.2	Melon (DHL92) v3.6.1	cmamedB780
CmaCh04G009400	CsaV3_3G005360	Cucumber (Chinese Long) v3	cmacucB0837
CmaCh04G009400	Cla97C10G189880	Watermelon (97103) v2	cmawmbB718
CmaCh04G009400	Bhi11G000515	Wax gourd	cmawgoB0821
CmaCh04G009400	CsGy3G005430	Cucumber (Gy14) v2	cgybcmaB416
CmaCh04G009400	Carg00053	Silver-seed gourd	carcmaB0948

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G009400	Silver-seed gourd	carcmaB1100
CmaCh04G009400	Cucurbita maxima (Rimu)	cmacmaB350
CmaCh04G009400	Cucumber (Gy14) v1	cgycmaB0081
CmaCh04G009400	Cucurbita moschata (Rifu)	cmacmoB700
CmaCh04G009400	Cucurbita moschata (Rifu)	cmacmoB704
CmaCh04G009400	Melon (DHL92) v3.5.1	cmameB693
CmaCh04G009400	Cucurbita pepo (Zucchini)	cmacpeB692
CmaCh04G009400	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G009400	Bottle gourd (USVL1VR-Ls)	cmalsiB685
CmaCh04G009400	Bottle gourd (USVL1VR-Ls)	cmalsiB689