CmaCh04G007830 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G007830
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSuccinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like protein
LocationCma_Chr04 : 3992403 .. 3993811 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACTCTGATTCCATAGAGACAATTGAATTGGAAAATCTTTTGATAAATGCCTGCATTACCATTCCCTCTGCGGAAGCCAGGAAAGAGAGCAGAGGAGCACATGCTCGTGAAGATTTTACAGTTAGTTTTATTTTCTTCTATTGATAGTAACACTTTCCTCCAACTTTATTTCTGTAACTTTGTTATACTCTGGTTATGCAGAAAAGAGATGATGAGAACTGGATGAAGCACACGTTGGGGTAACTCTCGTGTCTGACACTGTAAAAGAACAAGATTATCCTGTTTTTAATTAATAAGACGCTTCTTATTCTTAGTCTGTCACCTTTTCACGTCTTTGGGCTCTCGGTCCATGATCACCCCCTAGCTCAACTAGATTAAACGAAATCAATCTCAACAACTTACTAGTGCGCCTATGACTTCAATCAATTAACATCTTCTGTATTTTTGATAATGTGGTTGATTTTGCAGATTCTGGGAGAATGAGAAGGTCAGACTGGACTATAGGCCAGTGCACATGAACACATTGGACGATGAGGTCGGATCATTCCCTCCTCAGGCCCGTGTATACTGATCATCAAAGACTCTGGTAGTTTATTTACAATAATAGATGAAAGAAGACTGCAATAAATCACTGTAGGCAAGCCATGTGGACGGTAATTATTTAATGTTTGGTGGTATCTGCAATTTTAAGCAGATCGTTTTTATTTTTACAAGAAAATCATGTCATCAAGCTCATGCATAAATTCAATCCGCATACAAAATATGCCTTGTCTTTATAGTTTTCTGCCTTTTTCATTGGCATGGCCTACCACATGATATTACCGATTTGAAAGGAGATGGACGTTTATAAGCTACAAGCATGAATCATTCAAGTAGGAGATGTCACGGTTTTTTACTCAATAAATTGCTTGAGGTAACTTTTCCGTCTCTAGTAACTTCTTTTTTTCTATGAACTATTTCATAATTGGCAACTGCATAGTTACAAATATACGAATGAGATCTTAGTTGGTTTGGAAGTATCAATCGATCCGAGTCATTAGTCGTAGTCACATGTGCCCCAACCACACCAATACCACTGTTTCTGAATAAAGTTGGATTTATCATATCTGCCAAGTTGGGGAGTCTGTATATCATCTTTTTCTTCCGCTACAATGATGAGAAAAATTTTCAATTGATTGAATTGAATGCATTTAGGAGTGGGGAAAAACGTGAGTGGTGTGTATTTGATCTTCTGTAGTGACAGTTTCTCCCACTTTGGCCTTATATTTTACTACTAAATTCCAACAAAGTAGTTGCTTCTTCTGTAGCATTTCCATTTCAGATTTGACCTGAAATACCAATCCTACAACATTAATGCTTATAATTCAATCTCAACCATTCATTGACATGAGTTGTAGATATTATTT

mRNA sequence

ATGAACTCTGATTCCATAGAGACAATTGAATTGGAAAATCTTTTGATAAATGCCTGCATTACCATTCCCTCTGCGGAAGCCAGGAAAGAGAGCAGAGGAGCACATGCTCGTGAAGATTTTACAAAAAGAGATGATGAGAACTGGATGAAGCACACGTTGGGATTCTGGGAGAATGAGAAGGTCAGACTGGACTATAGGCCAGTGCACATGAACACATTGGACGATGAGGTCGGATCATTCCCTCCTCAGGCCCGTGTATACTGATCATCAAAGACTCTGGTAGTTTATTTACAATAATAGATGAAAGAAGACTGCAATAAATCACTGTAGGCAAGCCATGTGGACGGAGATGGACGTTTATAAGCTACAAGCATGAATCATTCAAGTAGGAGATGTCACGGTTTTTTACTCAATAAATTGCTTGAGGTAACTTTTCCGTCTCTAGTAACTTCTTTTTTTCTATGAACTATTTCATAATTGGCAACTGCATAGTTACAAATATACGAATGAGATCTTAGTTGGTTTGGAAGTATCAATCGATCCGAGTCATTAGTCGTAGTCACATGTGCCCCAACCACACCAATACCACTGTTTCTGAATAAAGTTGGATTTATCATATCTGCCAAGTTGGGGAGTCTGTATATCATCTTTTTCTTCCGCTACAATGATGAGAAAAATTTTCAATTGATTGAATTGAATGCATTTAGGAGTGGGGAAAAACGTGAGTGGTGTGTATTTGATCTTCTGTAGTGACAGTTTCTCCCACTTTGGCCTTATATTTTACTACTAAATTCCAACAAAGTAGTTGCTTCTTCTGTAGCATTTCCATTTCAGATTTGACCTGAAATACCAATCCTACAACATTAATGCTTATAATTCAATCTCAACCATTCATTGACATGAGTTGTAGATATTATTT

Coding sequence (CDS)

ATGAACTCTGATTCCATAGAGACAATTGAATTGGAAAATCTTTTGATAAATGCCTGCATTACCATTCCCTCTGCGGAAGCCAGGAAAGAGAGCAGAGGAGCACATGCTCGTGAAGATTTTACAAAAAGAGATGATGAGAACTGGATGAAGCACACGTTGGGATTCTGGGAGAATGAGAAGGTCAGACTGGACTATAGGCCAGTGCACATGAACACATTGGACGATGAGGTCGGATCATTCCCTCCTCAGGCCCGTGTATACTGA

Protein sequence

MNSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
Homology
[Close]
BLAST of CmaCh04G007830 vs. Swiss-Prot
Match: SDHA_ORYSJ (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.2e-38
Identity = 76/86 (88.37%), Postives = 80/86 (93.02%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDE WMKH+LG+WENEKV
Sbjct: 545 NSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEQWMKHSLGYWENEKV 604

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RL YRPVHMNTLD EV SFPP+ARVY
Sbjct: 605 RLAYRPVHMNTLDSEVESFPPKARVY 630

[Close]
BLAST of CmaCh04G007830 vs. Swiss-Prot
Match: SDHA1_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.7e-36
Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IET+ELENLLINA IT+ SAEARKESRGAHAREDFTKR+D  WMKHTLG+WE+EKV
Sbjct: 549 NSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEKV 608

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHM+TLDDE+ +FPP+ARVY
Sbjct: 609 RLDYRPVHMDTLDDEIDTFPPKARVY 634

[Close]
BLAST of CmaCh04G007830 vs. Swiss-Prot
Match: SDHA2_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH1-2 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.4e-35
Identity = 69/86 (80.23%), Postives = 77/86 (89.53%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IET+ELENLL+NACIT+ SAEARKESRGAHAREDFTKRDD NWMKHTLG+WE   V
Sbjct: 547 NSDLIETMELENLLVNACITMHSAEARKESRGAHAREDFTKRDDANWMKHTLGYWEEGNV 606

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           +L+YRPVHM TLDDEV +FPP+ RVY
Sbjct: 607 KLEYRPVHMKTLDDEVDTFPPKPRVY 632

[Close]
BLAST of CmaCh04G007830 vs. Swiss-Prot
Match: SDHA_RICCN (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN=sdhA PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-21
Identity = 53/87 (60.92%), Postives = 64/87 (73.56%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTL-GFWENEK 61
           NSD +E +EL+NLL  A +T+ SA ARKESRGAHARED+  R+DE+WMKHTL    E  K
Sbjct: 510 NSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDEDWMKHTLSSIDEAGK 569

Query: 62  VRLDYRPVHMNTLDDEVGSFPPQARVY 88
           V LDY+PV + TL DEV + PP  RVY
Sbjct: 570 VVLDYKPVTLTTLTDEVTAVPPVKRVY 596

[Close]
BLAST of CmaCh04G007830 vs. Swiss-Prot
Match: SDHA_RICBR (Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369-C) GN=sdhA PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.2e-21
Identity = 52/87 (59.77%), Postives = 64/87 (73.56%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTL-GFWENEK 61
           NSD +E +EL+NLL  A +T+ SA ARKESRGAHARED+  R+D+ WM+HTL G  E  K
Sbjct: 510 NSDLVEALELDNLLDQALVTVYSAAARKESRGAHAREDYPDRNDKEWMQHTLSGVDEAGK 569

Query: 62  VRLDYRPVHMNTLDDEVGSFPPQARVY 88
           V LDY+PV + TL DEV + PP  RVY
Sbjct: 570 VVLDYKPVTLTTLSDEVKAIPPAKRVY 596

[Close]
BLAST of CmaCh04G007830 vs. TrEMBL
Match: A0A0D2NUX6_GOSRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Gossypium raimondii GN=B456_003G015500 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-39
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKV
Sbjct: 545 NSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 604

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDE+ SFPP+ARVY
Sbjct: 605 RLDYRPVHMNTLDDEIESFPPKARVY 630

[Close]
BLAST of CmaCh04G007830 vs. TrEMBL
Match: A0A061DFR8_THECC (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Theobroma cacao GN=TCM_000401 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-39
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKV
Sbjct: 546 NSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 605

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDE+ SFPP+ARVY
Sbjct: 606 RLDYRPVHMNTLDDEIESFPPKARVY 631

[Close]
BLAST of CmaCh04G007830 vs. TrEMBL
Match: A0A0B0MGU4_GOSAR (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Gossypium arboreum GN=F383_13720 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 5.3e-39
Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IE+IELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV
Sbjct: 536 NSDLIESIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 595

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDEV SFPP+ARVY
Sbjct: 596 RLDYRPVHMNTLDDEVESFPPKARVY 621

[Close]
BLAST of CmaCh04G007830 vs. TrEMBL
Match: A0A068U1I2_COFCA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Coffea canephora GN=GSCOC_T00037240001 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 7.0e-39
Identity = 78/86 (90.70%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IET+ELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKV
Sbjct: 547 NSDLIETVELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 606

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDE+ SFPP+ARVY
Sbjct: 607 RLDYRPVHMNTLDDEIESFPPKARVY 632

[Close]
BLAST of CmaCh04G007830 vs. TrEMBL
Match: A0A0A0KUM6_CUCSA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucumis sativus GN=Csa_4G038700 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-38
Identity = 78/86 (90.70%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           N+D IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV
Sbjct: 550 NTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 609

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDE+ +FPP+ARVY
Sbjct: 610 RLDYRPVHMNTLDDEIETFPPKARVY 635

[Close]
BLAST of CmaCh04G007830 vs. TAIR10
Match: AT5G66760.1 (AT5G66760.1 succinate dehydrogenase 1-1)

HSP 1 Score: 152.1 bits (383), Expect = 1.5e-37
Identity = 71/86 (82.56%), Postives = 80/86 (93.02%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IET+ELENLLINA IT+ SAEARKESRGAHAREDFTKR+D  WMKHTLG+WE+EKV
Sbjct: 549 NSDLIETLELENLLINASITMHSAEARKESRGAHAREDFTKREDGEWMKHTLGYWEDEKV 608

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHM+TLDDE+ +FPP+ARVY
Sbjct: 609 RLDYRPVHMDTLDDEIDTFPPKARVY 634

[Close]
BLAST of CmaCh04G007830 vs. TAIR10
Match: AT2G18450.1 (AT2G18450.1 succinate dehydrogenase 1-2)

HSP 1 Score: 149.8 bits (377), Expect = 7.6e-37
Identity = 69/86 (80.23%), Postives = 77/86 (89.53%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IET+ELENLL+NACIT+ SAEARKESRGAHAREDFTKRDD NWMKHTLG+WE   V
Sbjct: 547 NSDLIETMELENLLVNACITMHSAEARKESRGAHAREDFTKRDDANWMKHTLGYWEEGNV 606

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           +L+YRPVHM TLDDEV +FPP+ RVY
Sbjct: 607 KLEYRPVHMKTLDDEVDTFPPKPRVY 632

[Close]
BLAST of CmaCh04G007830 vs. NCBI nr
Match: gi|747102851|ref|XP_011099603.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 168.3 bits (425), Expect = 5.9e-39
Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKV
Sbjct: 543 NSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 602

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDEV SFPP+ARVY
Sbjct: 603 RLDYRPVHMNTLDDEVESFPPKARVY 628

[Close]
BLAST of CmaCh04G007830 vs. NCBI nr
Match: gi|728808214|gb|KHF98130.1| (Succinate dehydrogenase [ubiquinone])

HSP 1 Score: 167.9 bits (424), Expect = 7.7e-39
Identity = 80/86 (93.02%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IE+IELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV
Sbjct: 536 NSDLIESIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 595

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDEV SFPP+ARVY
Sbjct: 596 RLDYRPVHMNTLDDEVESFPPKARVY 621

[Close]
BLAST of CmaCh04G007830 vs. NCBI nr
Match: gi|590703727|ref|XP_007046957.1| (Succinate dehydrogenase 1-1 isoform 1 [Theobroma cacao])

HSP 1 Score: 167.9 bits (424), Expect = 7.7e-39
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKV
Sbjct: 546 NSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 605

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDE+ SFPP+ARVY
Sbjct: 606 RLDYRPVHMNTLDDEIESFPPKARVY 631

[Close]
BLAST of CmaCh04G007830 vs. NCBI nr
Match: gi|823139176|ref|XP_012469440.1| (PREDICTED: succinate dehydrogenase [ubiquinone])

HSP 1 Score: 167.9 bits (424), Expect = 7.7e-39
Identity = 79/86 (91.86%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKV
Sbjct: 545 NSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 604

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDE+ SFPP+ARVY
Sbjct: 605 RLDYRPVHMNTLDDEIESFPPKARVY 630

[Close]
BLAST of CmaCh04G007830 vs. NCBI nr
Match: gi|661895030|emb|CDP02029.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 167.5 bits (423), Expect = 1.0e-38
Identity = 78/86 (90.70%), Postives = 83/86 (96.51%), Query Frame = 1 

Query: 2   NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKV 61
           NSD IET+ELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKV
Sbjct: 547 NSDLIETVELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWENEKV 606

Query: 62  RLDYRPVHMNTLDDEVGSFPPQARVY 88
           RLDYRPVHMNTLDDE+ SFPP+ARVY
Sbjct: 607 RLDYRPVHMNTLDDEIESFPPKARVY 632

The following BLAST results are available for this feature:
BLAST of CmaCh04G007830 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SDHA_ORYSJ2.2e-3888.37Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryz... [more]
SDHA1_ARATH2.7e-3682.56Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Ar... [more]
SDHA2_ARATH1.4e-3580.23Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Ar... [more]
SDHA_RICCN2.5e-2160.92Succinate dehydrogenase flavoprotein subunit OS=Rickettsia conorii (strain ATCC ... [more]
SDHA_RICBR3.2e-2159.77Succinate dehydrogenase flavoprotein subunit OS=Rickettsia bellii (strain RML369... [more]
BLAST of CmaCh04G007830 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2NUX6_GOSRA5.3e-3991.86Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Goss... [more]
A0A061DFR8_THECC5.3e-3991.86Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Theo... [more]
A0A0B0MGU4_GOSAR5.3e-3993.02Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Goss... [more]
A0A068U1I2_COFCA7.0e-3990.70Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Coff... [more]
A0A0A0KUM6_CUCSA1.2e-3890.70Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucu... [more]
BLAST of CmaCh04G007830 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66760.11.5e-3782.56 succinate dehydrogenase 1-1[more]
AT2G18450.17.6e-3780.23 succinate dehydrogenase 1-2[more]
BLAST of CmaCh04G007830 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|747102851|ref|XP_011099603.1|5.9e-3993.02PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|728808214|gb|KHF98130.1|7.7e-3993.02Succinate dehydrogenase [ubiquinone][more]
gi|590703727|ref|XP_007046957.1|7.7e-3991.86Succinate dehydrogenase 1-1 isoform 1 [Theobroma cacao][more]
gi|823139176|ref|XP_012469440.1|7.7e-3991.86PREDICTED: succinate dehydrogenase [ubiquinone][more]
gi|661895030|emb|CDP02029.1|1.0e-3890.70unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015939Fum_Rdtase/Succ_DH_flav-like_C
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:0006119 oxidative phosphorylation
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005618 cell wall
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function GO:0005524 ATP binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0008177 succinate dehydrogenase (ubiquinone) activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G007830.1CmaCh04G007830.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015939Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalGENE3DG3DSA:1.20.58.100coord: 1..35
score: 1.2
IPR015939Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalPFAMPF02910Succ_DH_flav_Ccoord: 1..87
score: 7.9
IPR015939Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminalunknownSSF46977Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domaincoord: 2..87
score: 7.98
NoneNo IPR availableGENE3DG3DSA:4.10.80.40coord: 36..87
score: 2.0
NoneNo IPR availablePANTHERPTHR11632SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNITcoord: 1..82
score: 2.4
NoneNo IPR availablePANTHERPTHR11632:SF54SUBFAMILY NOT NAMEDcoord: 1..82
score: 2.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G007830Cla014517Watermelon (97103) v1cmawmB677
CmaCh04G007830ClCG07G009160Watermelon (Charleston Gray)cmawcgB668
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G007830Cucurbita maxima (Rimu)cmacmaB350
CmaCh04G007830Cucurbita maxima (Rimu)cmacmaB546
CmaCh04G007830Cucumber (Gy14) v1cgycmaB0596
CmaCh04G007830Cucurbita moschata (Rifu)cmacmoB700
CmaCh04G007830Cucurbita moschata (Rifu)cmacmoB727
CmaCh04G007830Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G007830Wild cucumber (PI 183967)cmacpiB721
CmaCh04G007830Wild cucumber (PI 183967)cmacpiB785
CmaCh04G007830Cucumber (Chinese Long) v2cmacuB713
CmaCh04G007830Melon (DHL92) v3.5.1cmameB694
CmaCh04G007830Melon (DHL92) v3.5.1cmameB710
CmaCh04G007830Watermelon (Charleston Gray)cmawcgB639
CmaCh04G007830Watermelon (97103) v1cmawmB715
CmaCh04G007830Cucurbita pepo (Zucchini)cmacpeB714
CmaCh04G007830Cucurbita pepo (Zucchini)cmacpeB702
CmaCh04G007830Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G007830Cucurbita pepo (Zucchini)cmacpeB741
CmaCh04G007830Bottle gourd (USVL1VR-Ls)cmalsiB698
CmaCh04G007830Cucumber (Gy14) v2cgybcmaB547
CmaCh04G007830Melon (DHL92) v3.6.1cmamedB782
CmaCh04G007830Silver-seed gourdcarcmaB1288
CmaCh04G007830Silver-seed gourdcarcmaB1414
CmaCh04G007830Cucumber (Chinese Long) v3cmacucB0847
CmaCh04G007830Watermelon (97103) v2cmawmbB712
CmaCh04G007830Watermelon (97103) v2cmawmbB774
CmaCh04G007830Wax gourdcmawgoB0846