CmaCh04G007820 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCTAATAGGCTTGGTGCAAATTCGCTTTTGGACATTGTTGTCTTTGGACGAGCTTGTGCAAATAGGGTGGCAGAGATCAGTAGTCCAGGCAAGATGCTTAATTTTTAACTCGAAAAAGGAAGGATGAACCCACAACCCAATCCAACCAATAATTATAAGAAAGAAAAATTCAGTTACGTCAAAAAATTCTCTCTGGGCAGTTTGCAGGCGCAAGGCAAAATCCGTTGGAAAAAGATGCTGGTGAGAAGACAATTGCATGGCTAGACAAACTAAGGAACTCAAATGGTTCACTGCCCACCTCAAAGATTCGGTTAAACATGCAACGAATTATGCAAAACAATGCCTGCTGTTTTCCGAACACAGGAGACCTTGGAAGAAGGTATTAGCCAAACTGAAAAGAGACTTAGATTAAAACTTCTAGACTATCTGCAACTCTGCCTCAATTTTTTTTTTCACCTCTTTTATTGTCTTCTGCTTCTTTAGGGTGCAAATTAATTGA ATGGTGCTAATAGGCTTGGTGCAAATTCGCTTTTGGACATTGTTGTCTTTGGACGAGCTTGTGCAAATAGGGTGGCAGAGATCAGTAGTCCAGTTTGCAGGCGCAAGGCAAAATCCGTTGGAAAAAGATGCTGGTGAGAAGACAATTGCATGGCTAGACAAACTAAGGAACTCAAATGGTTCACTGCCCACCTCAAAGATTCGGTTAAACATGCAACGAATTATGCAAAACAATGCCTGCTGTTTTCCGAACACAGGAGACCTTGGAAGAAGGGTGCAAATTAATTGA ATGGTGCTAATAGGCTTGGTGCAAATTCGCTTTTGGACATTGTTGTCTTTGGACGAGCTTGTGCAAATAGGGTGGCAGAGATCAGTAGTCCAGTTTGCAGGCGCAAGGCAAAATCCGTTGGAAAAAGATGCTGGTGAGAAGACAATTGCATGGCTAGACAAACTAAGGAACTCAAATGGTTCACTGCCCACCTCAAAGATTCGGTTAAACATGCAACGAATTATGCAAAACAATGCCTGCTGTTTTCCGAACACAGGAGACCTTGGAAGAAGGGTGCAAATTAATTGA MVLIGLVQIRFWTLLSLDELVQIGWQRSVVQFAGARQNPLEKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNACCFPNTGDLGRRVQIN
BLAST of CmaCh04G007820 vs. Swiss-Prot
Match: SDHA1_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 4.0e-17 Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 1
BLAST of CmaCh04G007820 vs. Swiss-Prot
Match: SDHA_ORYSJ (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16 Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 1
BLAST of CmaCh04G007820 vs. Swiss-Prot
Match: SDHA2_ARATH (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana GN=SDH1-2 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 4.5e-16 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1
BLAST of CmaCh04G007820 vs. Swiss-Prot
Match: SDHA_DANRE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Danio rerio GN=sdha PE=2 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 1.0e-07 Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 1
BLAST of CmaCh04G007820 vs. Swiss-Prot
Match: SDHX_YEAST (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL045W PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 2.5e-06 Identity = 28/60 (46.67%), Postives = 36/60 (60.00%), Query Frame = 1
BLAST of CmaCh04G007820 vs. TrEMBL
Match: A0A151SEJ0_CAJCA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cajanus cajan GN=KK1_024853 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-16 Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 1
BLAST of CmaCh04G007820 vs. TrEMBL
Match: A0A022QQF4_ERYGU (Succinate dehydrogenase (quinone) (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a0028802mg PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.1e-16 Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1
BLAST of CmaCh04G007820 vs. TrEMBL
Match: M0TDM1_MUSAM (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Musa acuminata subsp. malaccensis PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 5.3e-16 Identity = 43/49 (87.76%), Postives = 45/49 (91.84%), Query Frame = 1
BLAST of CmaCh04G007820 vs. TrEMBL
Match: I1JCQ7_SOYBN (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Glycine max GN=GLYMA_02G057400 PE=3 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 5.3e-16 Identity = 45/55 (81.82%), Postives = 47/55 (85.45%), Query Frame = 1
BLAST of CmaCh04G007820 vs. TrEMBL
Match: N1R435_AEGTA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Aegilops tauschii GN=F775_29983 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 6.9e-16 Identity = 45/65 (69.23%), Postives = 50/65 (76.92%), Query Frame = 1
BLAST of CmaCh04G007820 vs. TAIR10
Match: AT5G66760.1 (AT5G66760.1 succinate dehydrogenase 1-1) HSP 1 Score: 88.6 bits (218), Expect = 2.3e-18 Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 1
BLAST of CmaCh04G007820 vs. TAIR10
Match: AT2G18450.1 (AT2G18450.1 succinate dehydrogenase 1-2) HSP 1 Score: 85.1 bits (209), Expect = 2.5e-17 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1
BLAST of CmaCh04G007820 vs. NCBI nr
Match: gi|694392199|ref|XP_009371587.1| (PREDICTED: succinate dehydrogenase [ubiquinone]) HSP 1 Score: 93.6 bits (231), Expect = 2.0e-16 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of CmaCh04G007820 vs. NCBI nr
Match: gi|1012342029|gb|KYP53226.1| (hypothetical protein KK1_024853 [Cajanus cajan]) HSP 1 Score: 93.6 bits (231), Expect = 2.0e-16 Identity = 45/54 (83.33%), Postives = 47/54 (87.04%), Query Frame = 1
BLAST of CmaCh04G007820 vs. NCBI nr
Match: gi|658017866|ref|XP_008344291.1| (PREDICTED: succinate dehydrogenase [ubiquinone]) HSP 1 Score: 93.6 bits (231), Expect = 2.0e-16 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of CmaCh04G007820 vs. NCBI nr
Match: gi|657948591|ref|XP_008338495.1| (PREDICTED: succinate dehydrogenase [ubiquinone]) HSP 1 Score: 93.6 bits (231), Expect = 2.0e-16 Identity = 46/61 (75.41%), Postives = 49/61 (80.33%), Query Frame = 1
BLAST of CmaCh04G007820 vs. NCBI nr
Match: gi|659107561|ref|XP_008453738.1| (PREDICTED: succinate dehydrogenase [ubiquinone]) HSP 1 Score: 92.8 bits (229), Expect = 3.4e-16 Identity = 44/49 (89.80%), Postives = 46/49 (93.88%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |