CmaCh04G007270 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAACACAACTACAAAACTTGGACTGTTAGCATCTTCATGAACCAATCCCAATCTCCTTATAAACTGACAAATCTATGAGATTGTATAGTGGTAAAAGCCTCCTTATGATCTTAGCTTCTTCTGTTCTTGCTCTATTCTCACTCGAGTTCTTCACAATCCTGAACTAAACATGAAGGTGATTCATTATATTCACTTCTTCTCATAACATTTCTAAATTTTTCTATGTTTTTATTGGCAATTTTGGGTCATTTTCAAGAACCCTAAACAGTTTGTACTTAGAACAGCAGATAATAATGGTATAATAATTGGTTTGTTCTTATATTTTGATGCAGAAAATAGTGGTGAGAGTGGATGTACCTGATGAAAGAGCAAAGCAGAAGGCTATGAAAGCAGTTTCCTGCCTTTCAGGTACTAAGTTTCATCCTCCTCAAACTAATTTAATTAAAAAAACAAAAAACAAAATGGTTATTCAACTAAATTTTAATACATCAAAATATTATAAGTGTGACGGTCTAACCACACCGCTAACAAATATTGTCATTTTTAAAATTTTTCCATCTAGATTTCTCTCAAGGCTTTAATCCCCAATTGATGTGGGATCTCACAATTCACCTATCTTCCGAGTCCAGCGTTCTCGCTGACACTCTTTTCTTTCTCCTGTCGATATGAGACTGCCCAATCCACTTCTTTTAAAGCCCAACGTCTTTACTGGCACACTGACTTAGTGCCCACTCCCATTCGGGGCTCAATCTCCTTATTGGCACATTGGCCGGTGTCTGGTTCTGATACTATTTTTAACAGGCTAAGCCCACCACAGACAGATTTTCACACCTTTATAAAAAAATGTTTCGTTCTCCTCACCAACCGATGTGTGATCTCACGACAAGTGTGTTATAAGTTTGTGGGTGATGTTGAGGATGCAGGGATAAACTCCATAACCATGGAGATGAAAGACAGGAAGATGATCGTCGTGGGGACAGTAGACCCAGTGGAAGTAGTGGAGAAGCTGAGAAAGCTTTGGTTTGCAGAGATTCTCACAGTTGGACCTCCAAAAGAAGTGGAAATCAAAAAACCACTAATTACTTGCATTGGGTATCCCTGTTATTGTTGTAATCAGCCCCCCACCTTCTATTACAAGCAAGAGGAAATCCCAAATGGTTGTGTTCTCTGTTGA TGAACACAACTACAAAACTTGGACTGTTAGCATCTTCATGAACCAATCCCAATCTCCTTATAAACTGACAAATCTATGAGATTGTATAGTGGTAAAAGCCTCCTTATGATCTTAGCTTCTTCTGTTCTTGCTCTATTCTCACTCGAGTTCTTCACAATCCTGAACTAAACATGAAGAAAATAGTGGTGAGAGTGGATGTACCTGATGAAAGAGCAAAGCAGAAGGCTATGAAAGCAGTTTCCTGCCTTTCAGACAGGAAGATGATCGTCGTGGGGACAGTAGACCCAGTGGAAGTAGTGGAGAAGCTGAGAAAGCTTTGGTTTGCAGAGATTCTCACAGTTGGACCTCCAAAAGAAGTGGAAATCAAAAAACCACTAATTACTTGCATTGGGTATCCCTGTTATTGTTGTAATCAGCCCCCCACCTTCTATTACAAGCAAGAGGAAATCCCAAATGGTTGTGTTCTCTGTTGA ATGAAGAAAATAGTGGTGAGAGTGGATGTACCTGATGAAAGAGCAAAGCAGAAGGCTATGAAAGCAGTTTCCTGCCTTTCAGACAGGAAGATGATCGTCGTGGGGACAGTAGACCCAGTGGAAGTAGTGGAGAAGCTGAGAAAGCTTTGGTTTGCAGAGATTCTCACAGTTGGACCTCCAAAAGAAGTGGAAATCAAAAAACCACTAATTACTTGCATTGGGTATCCCTGTTATTGTTGTAATCAGCCCCCCACCTTCTATTACAAGCAAGAGGAAATCCCAAATGGTTGTGTTCTCTGTTGA MKKIVVRVDVPDERAKQKAMKAVSCLSDRKMIVVGTVDPVEVVEKLRKLWFAEILTVGPPKEVEIKKPLITCIGYPCYCCNQPPTFYYKQEEIPNGCVLC
BLAST of CmaCh04G007270 vs. TrEMBL
Match: A0A0A0KY75_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G049110 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.4e-19 Identity = 59/111 (53.15%), Postives = 72/111 (64.86%), Query Frame = 1
BLAST of CmaCh04G007270 vs. TrEMBL
Match: A0A0D2QU41_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G155200 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-15 Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 1
BLAST of CmaCh04G007270 vs. TrEMBL
Match: A0A072TW71_MEDTR (Heavy metal transport/detoxification superfamily protein OS=Medicago truncatula GN=MTR_8g098915 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 3.1e-14 Identity = 57/131 (43.51%), Postives = 72/131 (54.96%), Query Frame = 1
BLAST of CmaCh04G007270 vs. TrEMBL
Match: V4VJ77_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022806mg PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.8e-14 Identity = 57/136 (41.91%), Postives = 72/136 (52.94%), Query Frame = 1
BLAST of CmaCh04G007270 vs. TrEMBL
Match: A0A0S3QXG8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G049200 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 8.9e-14 Identity = 58/137 (42.34%), Postives = 71/137 (51.82%), Query Frame = 1
BLAST of CmaCh04G007270 vs. TAIR10
Match: AT1G01490.1 (AT1G01490.1 Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 70.5 bits (171), Expect = 6.8e-13 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 1
BLAST of CmaCh04G007270 vs. TAIR10
Match: AT5G52740.1 (AT5G52740.1 Copper transport protein family) HSP 1 Score: 59.7 bits (143), Expect = 1.2e-09 Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 1
BLAST of CmaCh04G007270 vs. NCBI nr
Match: gi|778697516|ref|XP_011654340.1| (PREDICTED: putative late blight resistance protein homolog R1B-17 [Cucumis sativus]) HSP 1 Score: 102.8 bits (255), Expect = 3.5e-19 Identity = 59/111 (53.15%), Postives = 72/111 (64.86%), Query Frame = 1
BLAST of CmaCh04G007270 vs. NCBI nr
Match: gi|659102209|ref|XP_008452009.1| (PREDICTED: putative late blight resistance protein homolog R1B-17 [Cucumis melo]) HSP 1 Score: 100.9 bits (250), Expect = 1.3e-18 Identity = 61/112 (54.46%), Postives = 74/112 (66.07%), Query Frame = 1
BLAST of CmaCh04G007270 vs. NCBI nr
Match: gi|763753203|gb|KJB20591.1| (hypothetical protein B456_003G155200 [Gossypium raimondii]) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-15 Identity = 49/120 (40.83%), Postives = 69/120 (57.50%), Query Frame = 1
BLAST of CmaCh04G007270 vs. NCBI nr
Match: gi|922338233|ref|XP_013447106.1| (heavy metal transport/detoxification superfamily protein [Medicago truncatula]) HSP 1 Score: 85.9 bits (211), Expect = 4.4e-14 Identity = 57/131 (43.51%), Postives = 72/131 (54.96%), Query Frame = 1
BLAST of CmaCh04G007270 vs. NCBI nr
Match: gi|567893972|ref|XP_006439474.1| (hypothetical protein CICLE_v10022806mg [Citrus clementina]) HSP 1 Score: 84.7 bits (208), Expect = 9.8e-14 Identity = 57/136 (41.91%), Postives = 72/136 (52.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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