CmaCh04G000910 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G000910
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RNA-dependent RNA polymerase 1a
Location	Cma_Chr04 : 451848 .. 456720 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAAACGGTTCATATTAGTGGATTTCCTTCACATGCCACGGCAGATTCCGTGAAGAGTTTTCTGGAGCTTCGTACAGGTTTAGGAACTGTCTATGCCATTAAGGTTAGACCACCTAAAAGGGGAGGAAGTAGAGTATATGCTATTGTCCAATTCACTGGTGCTGCACAAGCTGAGTTGATCATTTCCTTAGCTAATCAACGCTTATGGTATGGATCCTCGTATCTTAAGGCTCGAGCGGCTGATGTCGACATTGTACCGAAGCCTAGGACATACGTGCATACCTTGGAAAACTTGACATTGTGCTTTGGCTGTCAGGTCTCCAGTGAAAAGTTTCATGTTCTATGGGAAGGAGATGTTGAGTTGGTGACTTTTGGAGTTGAAATGCGAAAAATGAACTTTCATCTGATTCATAATTTCGTTGAGTACAGGTTTCAGCTTTCCTATGAGAACATTTGGCAGATACAACTCCACCGTCTGCAACATCAGTCTATGAAATGTCTTCTGATTCAGGTTCTTGTCTCATGTTAATGTTGAAAAGCATTGTTATCCCTTTTAAACTTTAAAATTTTTTCCATCCTTGTTTAAGCATTGTTTCAATTATAAAAAGTATTGCTATTCTCTCTTAAAGTGGCTTGAATAATAGTAATTGTGAGATCCCACATCGGTTGGGAAGGAAAACGAAGCATTCTTTATAAGAGTGTGGAAACCTTTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGAAGTCCGAAAGGAAAAACCCAAAGAGGACAATATTTGTTAGAGGTGAGCTTGGGCTGTTACAAATGGTATCGGAGGCAAACACCGGGCAATGTGCCAGTGAGAAGACTGAGTCCCGAAGGGGGTGGACACGAGGCAGTGTGCCAGTAAAGAAGCTGGGCCCCAAAAGGGGTGGATTGGGGGATCCCACATCGATTGGAGAAGGGAACAAGTGCCAGCAAGGACGCTGGGCCCCGAAGGGGGTAGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACAAAACATTCTTTTCAAGGGGTAGAAATCTCACGCGTTTTAAAAACCTTGAGGAGAAGCCCGAAAAGGAAAACCCAAAAAAGACTGGCGGTGGGTTTGAGTGCTGTTACAACTTTCTCCTCGAAAAACGTGAAGATAGTTCTTAATATACCCCAAAAAAAAAAGAATGGAAGAAACAAACGATGACTTCCATGGCCATATATCTTACTAAATGTTGATACTAACAACACTGCTTTTGTTATGGTTGACCTTGAACTTTAGGTCTGTAATTTTGTCATTTTGACTGTTGAATGTAGTGGGTTCTGTCTTGATTATTACCATTATCTTAGATGCTGGTGTTCTTCATTTACAATATCTGCTGCTGGATTTTGATACAGTTCAAAATGATAATAGTTATGTTTTTCTCATCAGTTATATGGAGCCCCTCGGATATATAAAAAAGTTGCACCATCTAGTGGACAAATCTTTGATGATCCTCTTTTTAACTTCTTTAAAGAAGTACCTGATGATCAATGTGTTAGAACAGCTGATTTTACTCCATCATACTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCCAACTTTAGGCGACATTTTGCTTATTATGAAGAATTTGAAGATGAATTCAAACTGGTAGATGGAGGCAACGGTTTTTCTTGCTCCGACGATCTTGTTCCTGTGGTCGATTCTCATCCTAATGTTCTTCTGCCATATGAAATAATCTTTAAAGTAAATGTATTGGTTCAAAATGGTTGCATTCCAGGGCCATCACTCGATACTGGTTTCTATCGGTTGGTTGATCCGAGTCGAATAAGAGTTGAGTATGTAGAAAATGCATTAGAAAAACTGTTCCATTTGAAGGAATGCTGCTATGAGCCATCAAGCTTTCTTACTGAACAGTACAAGAAGTATGCAAAGCATCCTTCAAATTCTCCTGCTATAGCCTTGGATGCTGGATTGGTTTATGTCCGTAGGGTTCAAATAACACCTTGTAAGGTGTACTTCTGTGGTCCTGAAGTCAATGTTTCGAACCGGGTGTTGCGCCATTTTTCTCGAGATTTAGATAACTTTCTTCGTGTGTCTTTTGTTGATGAAGAGTGGGATAAAATGCGTTCAACGGATTTATTACCACGGATGGCTTCTTCGATCGAGAATGGTAAAACTGATATCTACAGGAGGATTCTCTCTGTTCTTAAAAATGGCATAGCCATTGGTGATAAAAAGTTTAAGTTTCTTGCATTCTCATCAAGTCAGCTAAGAGAGAATTCTTTGTGGATGTTTGCTTCCAGACCTGGCCTTGATGCAGCTGTTATTAGAGAGTGGATGGGTGATTTTCAACATATCAAGAATCCAGCAAAGTACGCTGCTAGATTGGGACAATCGTTCGGCTCATCGACGGAGACTCTTTCGGTTGCTAGGCATGAAAGGGAAATCATTCCTGACATAGAGGTTCAACATGGTGAAGTCAAGTATGTCTTTTCTGATGGAATTGGCAAAATATCAAGTGATTTTGCCAAAAGGGTTGCTTCAAAATGCGTGCTAGCGTTCACTCCGTCTGCTTTTCAGATTCGTTATGGTGGATATAAGGGTGTCGTTGCTGTTGATCCACGCTCGTCTGTAAAGTTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACGAAACTCGACGTCTTAGGCTATAGCAAATACCAACCATGCTTCCTGAATCGTCAGCTGATAACTCTTTTGTCGACTCTAGGCGTTAAAGATGAGGTTTTTGAGAAGAAACAAAGTGAAGCTTTAGAACAATTGGATGCCATATTAACAGATCCACTGAAGGCTCAAGAAGCCTTAGAGTTGATGTCTCCTGGAGAGAATACTAACATTCTCAAGGAGATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCTTATCTATCAATGATGTTACAGACTTTCCGGGAGTCGAAGTTGCTAGAATTACGAACCAAATCGAGAATCTTTATTCCGAATGGGCGAGCGATGATGGGATGTCTAGACGAGACTGGGACCTTGGAGTATGGACAGGTATTTGTACAAATCTCCAATGCTAGGCATAGACATATATCTGATACTTCTGCATTCGATATGAGCGGTTCGGAAGACCATTTAGTTATCGTGGGAAACGTAACTGTTGCGAAAAATCCCTGCCTGCACCCCGGCGATGTTCGTGTGCTAAACGCTGTAAATGTACCTCTGTTGTATCATATGGTTGACTGTGTAGTTTTTCCACAAAAAGGATCAAGGTTAGTACATTGACATATGCCGGTTCTTTCTTGATTTTGTTTTGAAGATTAACTAGATGCTGTACTTGTTAATATAGGCCTCATCCAAACGAATGCTCGGGTAGCGACTTGGACGGTGATATATACTTCGTCTGTTGGGACACTGAATTGATCCCACCTCGACAAATTCCGCCGATGGATTATACTCCTGCACCTCCCATTCAGTTAGATCGTGATGTCACAATCGAGGTATATCCACACAAGCACTGACTCGATCATGTTTCGTTTTTCAAACGTGTCGTTTTTTCAGTGTTTTATCTCAATTTCTAGAAGAGGAACCGTTCCTATATGTGTGGTTTTTGTACTAATTTAAAAGTACTGTTCTTTACAACAGGATGTTCAAGAATATTTTGTGAACTACATGGTTAATGATAGCCTTGGAATCATTGCCAATGCTCACACTGCGTTTGCAGATAAAGAGCCTTTCAAAGCAAGAAGTGCTCCTTGTATAGAGCTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCTGCTATAATACCTTCACATTTGAATGTCAAAGAGTTTCCCGACTTTATGGAGAAGCCTGACAGGCACTCGTATGAATCAAAGAACGTGATTGGAAAACTTTTCCGGGCAGTAAAGGGCATTGCACCAAATATAAGCTACATTAGGTCGTTTACTCGAGATGTAGCAATGCGGTGTTACGACTCCGATATGGAAGCTGAAGGCTTTGAAGATTACGTTGAAGATGCCATCTATCATAAAACTATATATGATTACAAGTTGGGGAATTTGCTTGATTATTACGGGATCAAGTCCGAGTCCGAGATATTTAGTGGCAATATTATGAGAATGTCGAAGTCTTTCACAAGGAGAAGAGACGCAGAAGCCATCAACTTGGCTGCAAGGTCTCTAAGAAAGGAGGCTAGGACATGGTTCAATACGAAAGAAAGCGGTCTGGATTCAGGCTCAGATGATTTATTTGCCAAAGCTTCGGCGTGGTACCATGTCACTTATCATCATTCGTATTGGGGCTCCTATAATGACGGAATGAAACGCGACCATTATTTGAGCTTCCCATGGTGTGTTTACCACAAACTGATGCAAGTCAAGGAGAATAATTTGAGGAAAAGAGAGAGAGCTTCAAGATTGGCGACTCTTGATAGATTCAGCCGTGTCTTAAATCTCGATGGACGTTGAAGAACACGATCGACACCAGTTGGTTTCCTGTTCTAGCTCCCTCTGATATATCTGATGGTCTTTATCTCTAGTTTTGTGAATATACTTGGCTTTGGCTTTGGCCCTTGTTTGCTACTCTTTTGAGAGCTTCTTAGTTTGCTTAGTCACCTTTTTCTTTACTATGTAATATCTACTCTATACATTGGGCAGTGTTCATGAAATCTGAAATCTTAGCCTACTTTTCTTAAACACAAGCTCGTCCCCGTGCCCGTCCTGTTGCAGGTATATGTATGACTTGTTCATATAATGGTTCGACGCAAGAAAGAAGCATAAATTTTTCTTCGAATGATCAGTAC

mRNA sequence

ATGGGGAAAACGGTTCATATTAGTGGATTTCCTTCACATGCCACGGCAGATTCCGTGAAGAGTTTTCTGGAGCTTCGTACAGGTTTAGGAACTGTCTATGCCATTAAGGTTAGACCACCTAAAAGGGGAGGAAGTAGAGTATATGCTATTGTCCAATTCACTGGTGCTGCACAAGCTGAGTTGATCATTTCCTTAGCTAATCAACGCTTATGGTATGGATCCTCGTATCTTAAGGCTCGAGCGGCTGATGTCGACATTGTACCGAAGCCTAGGACATACGTGCATACCTTGGAAAACTTGACATTGTGCTTTGGCTGTCAGGTCTCCAGTGAAAAGTTTCATGTTCTATGGGAAGGAGATGTTGAGTTGGTGACTTTTGGAGTTGAAATGCGAAAAATGAACTTTCATCTGATTCATAATTTCGTTGAGTACAGGTTTCAGCTTTCCTATGAGAACATTTGGCAGATACAACTCCACCGTCTGCAACATCAGTCTATGAAATGTCTTCTGATTCAGTTATATGGAGCCCCTCGGATATATAAAAAAGTTGCACCATCTAGTGGACAAATCTTTGATGATCCTCTTTTTAACTTCTTTAAAGAAGTACCTGATGATCAATGTGTTAGAACAGCTGATTTTACTCCATCATACTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCCAACTTTAGGCGACATTTTGCTTATTATGAAGAATTTGAAGATGAATTCAAACTGGTAGATGGAGGCAACGGTTTTTCTTGCTCCGACGATCTTGTTCCTGTGGTCGATTCTCATCCTAATGTTCTTCTGCCATATGAAATAATCTTTAAAGTAAATGTATTGGTTCAAAATGGTTGCATTCCAGGGCCATCACTCGATACTGGTTTCTATCGGTTGGTTGATCCGAGTCGAATAAGAGTTGAGTATGTAGAAAATGCATTAGAAAAACTGTTCCATTTGAAGGAATGCTGCTATGAGCCATCAAGCTTTCTTACTGAACAGTACAAGAAGTATGCAAAGCATCCTTCAAATTCTCCTGCTATAGCCTTGGATGCTGGATTGGTTTATGTCCGTAGGGTTCAAATAACACCTTGTAAGGTGTACTTCTGTGGTCCTGAAGTCAATGTTTCGAACCGGGTGTTGCGCCATTTTTCTCGAGATTTAGATAACTTTCTTCGTGTGTCTTTTGTTGATGAAGAGTGGGATAAAATGCGTTCAACGGATTTATTACCACGGATGGCTTCTTCGATCGAGAATGGTAAAACTGATATCTACAGGAGGATTCTCTCTGTTCTTAAAAATGGCATAGCCATTGGTGATAAAAAGTTTAAGTTTCTTGCATTCTCATCAAGTCAGCTAAGAGAGAATTCTTTGTGGATGTTTGCTTCCAGACCTGGCCTTGATGCAGCTGTTATTAGAGAGTGGATGGGTGATTTTCAACATATCAAGAATCCAGCAAAGTACGCTGCTAGATTGGGACAATCGTTCGGCTCATCGACGGAGACTCTTTCGGTTGCTAGGCATGAAAGGGAAATCATTCCTGACATAGAGGTTCAACATGGTGAAGTCAAGTATGTCTTTTCTGATGGAATTGGCAAAATATCAAGTGATTTTGCCAAAAGGGTTGCTTCAAAATGCGTGCTAGCGTTCACTCCGTCTGCTTTTCAGATTCGTTATGGTGGATATAAGGGTGTCGTTGCTGTTGATCCACGCTCGTCTGTAAAGTTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACGAAACTCGACGTCTTAGGCTATAGCAAATACCAACCATGCTTCCTGAATCGTCAGCTGATAACTCTTTTGTCGACTCTAGGCGTTAAAGATGAGGTTTTTGAGAAGAAACAAAGTGAAGCTTTAGAACAATTGGATGCCATATTAACAGATCCACTGAAGGCTCAAGAAGCCTTAGAGTTGATGTCTCCTGGAGAGAATACTAACATTCTCAAGGAGATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCTTATCTATCAATGATGTTACAGACTTTCCGGGAGTCGAAGTTGCTAGAATTACGAACCAAATCGAGAATCTTTATTCCGAATGGGCGAGCGATGATGGGATGTCTAGACGAGACTGGGACCTTGGAGTATGGACAGGTATTTGTACAAATCTCCAATGCTAGGCATAGACATATATCTGATACTTCTGCATTCGATATGAGCGGTTCGGAAGACCATTTAGTTATCGTGGGAAACGTAACTGTTGCGAAAAATCCCTGCCTGCACCCCGGCGATGTTCGTGTGCTAAACGCTGTAAATGTACCTCTGTTGTATCATATGGTTGACTGTGTAGTTTTTCCACAAAAAGGATCAAGGCCTCATCCAAACGAATGCTCGGGTAGCGACTTGGACGGTGATATATACTTCGTCTGTTGGGACACTGAATTGATCCCACCTCGACAAATTCCGCCGATGGATTATACTCCTGCACCTCCCATTCAGTTAGATCGTGATGTCACAATCGAGGATGTTCAAGAATATTTTGTGAACTACATGGTTAATGATAGCCTTGGAATCATTGCCAATGCTCACACTGCGTTTGCAGATAAAGAGCCTTTCAAAGCAAGAAGTGCTCCTTGTATAGAGCTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCTGCTATAATACCTTCACATTTGAATGTCAAAGAGTTTCCCGACTTTATGGAGAAGCCTGACAGGCACTCGTATGAATCAAAGAACGTGATTGGAAAACTTTTCCGGGCAGTAAAGGGCATTGCACCAAATATAAGCTACATTAGGTCGTTTACTCGAGATGTAGCAATGCGGTGTTACGACTCCGATATGGAAGCTGAAGGCTTTGAAGATTACGTTGAAGATGCCATCTATCATAAAACTATATATGATTACAAGTTGGGGAATTTGCTTGATTATTACGGGATCAAGTCCGAGTCCGAGATATTTAGTGGCAATATTATGAGAATGTCGAAGTCTTTCACAAGGAGAAGAGACGCAGAAGCCATCAACTTGGCTGCAAGGTCTCTAAGAAAGGAGGCTAGGACATGGTTCAATACGAAAGAAAGCGGTCTGGATTCAGGCTCAGATGATTTATTTGCCAAAGCTTCGGCGTGGTACCATGTCACTTATCATCATTCGTATTGGGGCTCCTATAATGACGGAATGAAACGCGACCATTATTTGAGCTTCCCATGGTGTGTTTACCACAAACTGATGCAAGTCAAGGAGAATAATTTGAGGAAAAGAGAGAGAGCTTCAAGATTGGCGACTCTTGATAGATTCAGCCGTGTCTTAAATCTCGATGGACGTTGAAGAACACGATCGACACCAGTTGGTTTCCTGTTCTAGCTCCCTCTGATATATCTGATGGTCTTTATCTCTAGTTTTGTGAATATACTTGGCTTTGGCTTTGGCCCTTGTTTGCTACTCTTTTGAGAGCTTCTTAGTTTGCTTAGTCACCTTTTTCTTTACTATGTAATATCTACTCTATACATTGGGCAGTGTTCATGAAATCTGAAATCTTAGCCTACTTTTCTTAAACACAAGCTCGTCCCCGTGCCCGTCCTGTTGCAGGTATATGTATGACTTGTTCATATAATGGTTCGACGCAAGAAAGAAGCATAAATTTTTCTTCGAATGATCAGTAC

Coding sequence (CDS)

ATGGGGAAAACGGTTCATATTAGTGGATTTCCTTCACATGCCACGGCAGATTCCGTGAAGAGTTTTCTGGAGCTTCGTACAGGTTTAGGAACTGTCTATGCCATTAAGGTTAGACCACCTAAAAGGGGAGGAAGTAGAGTATATGCTATTGTCCAATTCACTGGTGCTGCACAAGCTGAGTTGATCATTTCCTTAGCTAATCAACGCTTATGGTATGGATCCTCGTATCTTAAGGCTCGAGCGGCTGATGTCGACATTGTACCGAAGCCTAGGACATACGTGCATACCTTGGAAAACTTGACATTGTGCTTTGGCTGTCAGGTCTCCAGTGAAAAGTTTCATGTTCTATGGGAAGGAGATGTTGAGTTGGTGACTTTTGGAGTTGAAATGCGAAAAATGAACTTTCATCTGATTCATAATTTCGTTGAGTACAGGTTTCAGCTTTCCTATGAGAACATTTGGCAGATACAACTCCACCGTCTGCAACATCAGTCTATGAAATGTCTTCTGATTCAGTTATATGGAGCCCCTCGGATATATAAAAAAGTTGCACCATCTAGTGGACAAATCTTTGATGATCCTCTTTTTAACTTCTTTAAAGAAGTACCTGATGATCAATGTGTTAGAACAGCTGATTTTACTCCATCATACTCTATTGGACAATCTTCTTCTTTATGTTTGAAGCTACCTAATGGCCGTCAACTTCCCAACTTTAGGCGACATTTTGCTTATTATGAAGAATTTGAAGATGAATTCAAACTGGTAGATGGAGGCAACGGTTTTTCTTGCTCCGACGATCTTGTTCCTGTGGTCGATTCTCATCCTAATGTTCTTCTGCCATATGAAATAATCTTTAAAGTAAATGTATTGGTTCAAAATGGTTGCATTCCAGGGCCATCACTCGATACTGGTTTCTATCGGTTGGTTGATCCGAGTCGAATAAGAGTTGAGTATGTAGAAAATGCATTAGAAAAACTGTTCCATTTGAAGGAATGCTGCTATGAGCCATCAAGCTTTCTTACTGAACAGTACAAGAAGTATGCAAAGCATCCTTCAAATTCTCCTGCTATAGCCTTGGATGCTGGATTGGTTTATGTCCGTAGGGTTCAAATAACACCTTGTAAGGTGTACTTCTGTGGTCCTGAAGTCAATGTTTCGAACCGGGTGTTGCGCCATTTTTCTCGAGATTTAGATAACTTTCTTCGTGTGTCTTTTGTTGATGAAGAGTGGGATAAAATGCGTTCAACGGATTTATTACCACGGATGGCTTCTTCGATCGAGAATGGTAAAACTGATATCTACAGGAGGATTCTCTCTGTTCTTAAAAATGGCATAGCCATTGGTGATAAAAAGTTTAAGTTTCTTGCATTCTCATCAAGTCAGCTAAGAGAGAATTCTTTGTGGATGTTTGCTTCCAGACCTGGCCTTGATGCAGCTGTTATTAGAGAGTGGATGGGTGATTTTCAACATATCAAGAATCCAGCAAAGTACGCTGCTAGATTGGGACAATCGTTCGGCTCATCGACGGAGACTCTTTCGGTTGCTAGGCATGAAAGGGAAATCATTCCTGACATAGAGGTTCAACATGGTGAAGTCAAGTATGTCTTTTCTGATGGAATTGGCAAAATATCAAGTGATTTTGCCAAAAGGGTTGCTTCAAAATGCGTGCTAGCGTTCACTCCGTCTGCTTTTCAGATTCGTTATGGTGGATATAAGGGTGTCGTTGCTGTTGATCCACGCTCGTCTGTAAAGTTATCTCTGAGGAAGAGTATGTGCAAATTTGAATCAGACAACACGAAACTCGACGTCTTAGGCTATAGCAAATACCAACCATGCTTCCTGAATCGTCAGCTGATAACTCTTTTGTCGACTCTAGGCGTTAAAGATGAGGTTTTTGAGAAGAAACAAAGTGAAGCTTTAGAACAATTGGATGCCATATTAACAGATCCACTGAAGGCTCAAGAAGCCTTAGAGTTGATGTCTCCTGGAGAGAATACTAACATTCTCAAGGAGATGCTCAAATGTGGCTATAAACCAGATGTTGAGCCTTATCTATCAATGATGTTACAGACTTTCCGGGAGTCGAAGTTGCTAGAATTACGAACCAAATCGAGAATCTTTATTCCGAATGGGCGAGCGATGATGGGATGTCTAGACGAGACTGGGACCTTGGAGTATGGACAGGTATTTGTACAAATCTCCAATGCTAGGCATAGACATATATCTGATACTTCTGCATTCGATATGAGCGGTTCGGAAGACCATTTAGTTATCGTGGGAAACGTAACTGTTGCGAAAAATCCCTGCCTGCACCCCGGCGATGTTCGTGTGCTAAACGCTGTAAATGTACCTCTGTTGTATCATATGGTTGACTGTGTAGTTTTTCCACAAAAAGGATCAAGGCCTCATCCAAACGAATGCTCGGGTAGCGACTTGGACGGTGATATATACTTCGTCTGTTGGGACACTGAATTGATCCCACCTCGACAAATTCCGCCGATGGATTATACTCCTGCACCTCCCATTCAGTTAGATCGTGATGTCACAATCGAGGATGTTCAAGAATATTTTGTGAACTACATGGTTAATGATAGCCTTGGAATCATTGCCAATGCTCACACTGCGTTTGCAGATAAAGAGCCTTTCAAAGCAAGAAGTGCTCCTTGTATAGAGCTTGCAAAGCTATTCTCCATTGCTGTGGACTTCCCAAAAACTGGAGTACCTGCTATAATACCTTCACATTTGAATGTCAAAGAGTTTCCCGACTTTATGGAGAAGCCTGACAGGCACTCGTATGAATCAAAGAACGTGATTGGAAAACTTTTCCGGGCAGTAAAGGGCATTGCACCAAATATAAGCTACATTAGGTCGTTTACTCGAGATGTAGCAATGCGGTGTTACGACTCCGATATGGAAGCTGAAGGCTTTGAAGATTACGTTGAAGATGCCATCTATCATAAAACTATATATGATTACAAGTTGGGGAATTTGCTTGATTATTACGGGATCAAGTCCGAGTCCGAGATATTTAGTGGCAATATTATGAGAATGTCGAAGTCTTTCACAAGGAGAAGAGACGCAGAAGCCATCAACTTGGCTGCAAGGTCTCTAAGAAAGGAGGCTAGGACATGGTTCAATACGAAAGAAAGCGGTCTGGATTCAGGCTCAGATGATTTATTTGCCAAAGCTTCGGCGTGGTACCATGTCACTTATCATCATTCGTATTGGGGCTCCTATAATGACGGAATGAAACGCGACCATTATTTGAGCTTCCCATGGTGTGTTTACCACAAACTGATGCAAGTCAAGGAGAATAATTTGAGGAAAAGAGAGAGAGCTTCAAGATTGGCGACTCTTGATAGATTCAGCCGTGTCTTAAATCTCGATGGACGTTGA

Protein sequence

MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIYKKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRRHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGIGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR

Homology

[Close]

BLAST of CmaCh04G000910 vs. Swiss-Prot
Match: RDR1_ARATH (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1)

HSP 1 Score: 1396.3 bits (3613), Expect = 0.0e+00
Identity = 707/1129 (62.62%), Postives = 848/1129 (75.11%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+ + GFP+  +A+ VK FLE  TG GTVYAIKVR PK+GG RVYAIVQFT      
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LII+ A +RL+YG SYLKA   + DIVPKPR  +HT+  L + FGCQVS++KF  LW   
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
               V+FG+ MRK++F       +YR +LSYENIWQI LH  Q +S K L+IQ+ GAP+I+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            +K       +F   + +F+ +  D+Q +RT DFT S  IGQS++ CL+LP    +P+FR 
Sbjct: 181  EKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCS-DDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGP 300
            +FA Y E      L++ G+ +S + + LVPVVD  P   LP+EI+FK+N LVQN C+ GP
Sbjct: 241  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300

Query: 301  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKY---AKHPSNSPA 360
            +LD  FYRL++  +     +++ LEKLFHL ECCYEP+ +L ++YKK+    K P  SP 
Sbjct: 301  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPL-SPT 360

Query: 361  IALDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRST 420
            I+LD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+S+ ++NFLRVSFVDE+ +K+RS 
Sbjct: 361  ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 420

Query: 421  DLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGL 480
            DL PR ++     +T +Y RI SVL++GI IGDKKF+FLAFSSSQLRENS WMFA    +
Sbjct: 421  DLSPRSSTQ---RRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRI 480

Query: 481  DAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVF 540
             AA IR WMGDF HI+N AKYAARLGQSF SS ETL+V   E E+IPD+E+     +YVF
Sbjct: 481  TAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVF 540

Query: 541  SDGIGKISSDFAKRVASKCVLA-FTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFE 600
            SDGIGKIS++FA++VA KC L  F+PSAFQIRYGGYKGVVAVDP SS KLSLRKSM KFE
Sbjct: 541  SDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFE 600

Query: 601  SDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQE 660
            S+NTKLDVL +SKYQPC++NRQLITLLSTLGV D VFEKKQ E +++LDAILT PL+A E
Sbjct: 601  SENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHE 660

Query: 661  ALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMM 720
            AL LM+PGENTNILK ++ CGYKPD EP+LSMMLQ FR SKLLELRTK+RIFI  GR+MM
Sbjct: 661  ALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMM 720

Query: 721  GCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDV 780
            GCLDET TLEYGQV VQ S             D        +I G V VAKNPCLHPGDV
Sbjct: 721  GCLDETRTLEYGQVVVQYS-------------DPMRPGRRFIITGPVVVAKNPCLHPGDV 780

Query: 781  RVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMD 840
            RVL AVNVP L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR   PMD
Sbjct: 781  RVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMD 840

Query: 841  YTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKL 900
            YTP P   LD DVTIE+V+EYF NY+VNDSLGIIANAHTAFADKEP KA S PCIELAK 
Sbjct: 841  YTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKK 900

Query: 901  FSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYI 960
            FS AVDFPKTGV A+IP HL VKE+PDFMEKPD+ +YESKNVIGKLFR VK  AP +  I
Sbjct: 901  FSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISI 960

Query: 961  RSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIM 1020
            +SFT DVA + YD DME +GFE+YV++A Y K  YD+KLGNL+DYYGIK+E+EI SG IM
Sbjct: 961  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1020

Query: 1021 RMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSY 1080
            RMSKSFT+RRDAE+I  A R+LRKE  + FN  E       ++  AKASAWYHVTYH SY
Sbjct: 1021 RMSKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWYHVTYHSSY 1080

Query: 1081 WGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSR 1125
            WG YN+G+ RDH+LSF WCVY KL+++K+ NL +R+R   L  LD   R
Sbjct: 1081 WGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQETLERLDHVLR 1105

[Close]

BLAST of CmaCh04G000910 vs. Swiss-Prot
Match: RDR1_ORYSJ (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 PE=2 SV=2)

HSP 1 Score: 961.1 bits (2483), Expect = 1.1e-278
Identity = 482/748 (64.44%), Postives = 588/748 (78.61%), Query Frame = 1


Query: 376  VYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLLPRMASSIENGKTDIYR 435
            VYF GPE+NVSNRV+R+FS D++NFLR+SFVDE+ +K+R+TDL PR AS  +  +T +Y+
Sbjct: 9    VYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASGHDANRTALYK 68

Query: 436  RILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAVIREWMGDFQHIKNPA 495
            R+LSVL +GI IG K F+FLAFSSSQLR+NS WMFASR GL A+ IR WMGDF++I+N A
Sbjct: 69   RVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNIRNVA 128

Query: 496  KYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGIGKISSDFAKRVASKC 555
            KYAARLGQSF SSTETL V ++E E I DI+      ++VFSDGIGKISS FA  VA KC
Sbjct: 129  KYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEVAMKC 188

Query: 556  VLA-FTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNTKLDVLGYSKYQPCFL 615
             L  F PSAFQIRYGGYKGVVAVDP S  KLSLRKSM KF+SDN  +DVL YSKYQP FL
Sbjct: 189  NLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQPGFL 248

Query: 616  NRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALELMSPGENTNILKEMLK 675
            NRQLITLLSTLGV+D VFE+KQ EA+ QL+ ++TDP  A EA+ELM  GE TN +KE+L 
Sbjct: 249  NRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVKELLL 308

Query: 676  CGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLDETGTLEYGQVFVQIS 735
            CGY+PD EPYLSM+LQTFR SKLLEL+TKSRI IP GRAMMGCLDET TL+YGQVF++ +
Sbjct: 309  CGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVFIRAT 368

Query: 736  NARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLNAVNVPLLYHMVDCVV 795
            +     ++D          D   + G V +AKNPCLHPGD+R+L+AV+VP+L+HM +CVV
Sbjct: 369  SG----VNDN---------DRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHHMFNCVV 428

Query: 796  FPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPAPPIQLDRDVTIEDVQ 855
            FPQ+G RPHPNECSGSDLDGDIYFV WD  LIPPR + PMDYTPAP   LD DVTIE+V+
Sbjct: 429  FPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDVTIEEVE 488

Query: 856  EYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIAVDFPKTGVPAIIPSH 915
            EYF NY+VN+SLG+IANAH  FADKE  KA S+PCIELAKLFSIAVDFPKTGVPA+IP  
Sbjct: 489  EYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVPALIPPE 548

Query: 916  LNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFTRDVAMRCYDSDMEAE 975
            L+VKE+PDFMEK D+ +YESK VIGKL+R +K   P   +I+ FTR+VA R YD+DM  +
Sbjct: 549  LHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTP---HIKHFTREVARRSYDTDMIVD 608

Query: 976  GFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSKSFTRRRDAEAINLAA 1035
            G+EDY+ +A+  K  YD+KLGNL+D+YGIKSE+EI SG I++M+K+FT++ DA+AI LA 
Sbjct: 609  GYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMAKNFTKKSDADAIRLAV 668

Query: 1036 RSLRKEARTWFNTKESGLDS---GSDDLFAKASAWYHVTYHHSYWGSYNDGMKRDHYLSF 1095
            RSLRKEAR+ F+  E  LD    G D   AKASAWYHVTYH  +WG YN+G +R H++SF
Sbjct: 669  RSLRKEARSRFS--EMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEGYERPHFISF 728

Query: 1096 PWCVYHKLMQVKENNLRKRERASRLATL 1120
            PWC+Y KL+++K+     R+    L +L
Sbjct: 729  PWCIYEKLLRIKQRRKFVRKMQPELFSL 735

[Close]

BLAST of CmaCh04G000910 vs. Swiss-Prot
Match: RDR2_ARATH (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana GN=RDR2 PE=1 SV=1)

HSP 1 Score: 763.1 bits (1969), Expect = 4.4e-219
Identity = 452/1144 (39.51%), Postives = 668/1144 (58.39%), Query Frame = 1


Query: 4    TVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGG--SRVYAIVQFTGA---AQ 63
            TV IS  P    AD +  FLEL  G  TV+A+++ P  R     R +A VQFT     ++
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEI-PTTRDNWKPRDFARVQFTTLEVKSR 70

Query: 64   AELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEK-FHVLW 123
            A+L+ S    +L + +  L+   A  DI+P+P      L+++ L  G   S EK F  L 
Sbjct: 71   AQLLSS--QSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALE 130

Query: 124  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMK--CLLIQLYG 183
            + D        E R++ F +  +   Y+ ++ +E+I +     +   + +    L++L  
Sbjct: 131  KWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKY 190

Query: 184  APRIYKKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQL 243
             P+++K+V       F    + F KE  D   +RT DF+ S SIG S+  CL++ NG  +
Sbjct: 191  GPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 250

Query: 244  PNFRRHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVL-LPYEIIFKVNVLVQNG 303
             +      YY E       VDG   F+ +  +VP++++    L  PYEI+F++N LV   
Sbjct: 251  LDIFSGLPYYREDTLSLTYVDGKT-FASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQ 310

Query: 304  CIP-GPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSN 363
             I    + D    +++    +    V   L+KL      CY+P  F+  Q +   K   +
Sbjct: 311  KISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKH 370

Query: 364  SPAIAL----DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEE 423
            SPA A     +  ++  +R  +TP K+Y  GPE+  +N V+++F+  + +F+RV+FV+E+
Sbjct: 371  SPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEED 430

Query: 424  WDKMRSTDLLPRMASS--IENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSL 483
            W K+ +  L         ++  +T+IY R+LS+L  GI +G K+F+FLAFS+SQLR NS+
Sbjct: 431  WSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSV 490

Query: 484  WMFASRPGLDAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEV 543
            WMFAS   + A  IREWMG F+ I++ +K AAR+GQ F +S +TL V   + E IPDIEV
Sbjct: 491  WMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEV 550

Query: 544  QHGEVKYVFSDGIGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSL 603
                  Y FSDGIGKIS  FAK+VA KC L+  PSAFQIRYGGYKGV+AVD  S  KLSL
Sbjct: 551  TTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSL 610

Query: 604  RKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAIL 663
            R SM KF+S+N  L+V  +++  PCFLNR++I LLSTLG++D +FE  Q+  L  L  +L
Sbjct: 611  RDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNML 670

Query: 664  TDPLKAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIF 723
             D   A   L+ +S   + N+L +ML  GY P  EPYLSMML+   ES+L EL+++ RI 
Sbjct: 671  EDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRIL 730

Query: 724  IPNGRAMMGCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKN 783
            +P GR ++GC+DE G LEYGQV+V+++  +    S   ++     E+  V++G V V KN
Sbjct: 731  VPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKN 790

Query: 784  PCLHPGDVRVLNAVNVPLLYH--MVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTEL 843
            PCLHPGD+RVL+A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD ++
Sbjct: 791  PCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKI 850

Query: 844  IPPRQIPPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKAR 903
            IP    PPMDY  + P  +D DVT+E++ ++FV+YM++D+LG+I+ AH   AD++P KAR
Sbjct: 851  IPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKAR 910

Query: 904  SAPCIELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAV 963
            S  C+ELA L S AVDF KTG PA +P  L  +EFPDF+E+ ++ +Y S++V GKL+RAV
Sbjct: 911  SQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAV 970

Query: 964  KGIAPNISYIRSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKS 1023
            K    +++  +          YD  +E  GFE ++E A  H+ +Y  KL +L+ YYG  +
Sbjct: 971  KS---SLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAAN 1030

Query: 1024 ESEIFSGNI----MRMSKSFTRRRD-AEAINLAARSLRKEARTWFNTKESGLDSGSDDLF 1083
            E EI +G +    M +++   R  D  + I L+ + L KEA  WF        S  D+  
Sbjct: 1031 EEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFE------KSCEDEQQ 1090

Query: 1084 AK--ASAWYHVTYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKR---ERASR 1120
             K  ASAWY+VTY+       N   ++  +LSFPW V   L+ +K  N +++   E+ S 
Sbjct: 1091 KKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVEEKTSG 1133

[Close]

BLAST of CmaCh04G000910 vs. Swiss-Prot
Match: RDR2_ORYSJ (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 PE=2 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 3.1e-217
Identity = 437/1133 (38.57%), Postives = 649/1133 (57.28%), Query Frame = 1


Query: 4    TVHISGFPSHATADSVKSFLELRTGL-GTVYAIKVRPPKRGG-SRVYAIVQFTGAAQAEL 63
            ++ +S  P  A A  + +F +    + G  +A ++    RG  SR +  VQF  AA A  
Sbjct: 11   SLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAAA 70

Query: 64   IISLANQ-RL-WYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVL--W 123
               LA+  RL  +  + L    + VD++P+            L  G +V+   F     W
Sbjct: 71   AAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADAW 130

Query: 124  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAP 183
            +G    V  G   R+++ +L H+   Y+ ++ +E++       L    M  +L+QL  AP
Sbjct: 131  DGVRAEVIPG--KRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTLD--GMGAILLQLNYAP 190

Query: 184  RIYKKVA-PSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLP 243
            RI+  ++ P+    F D  F+  KE      VR  DFTP+YS G+ S+L LKL     + 
Sbjct: 191  RIHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVS 250

Query: 244  NFRRHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCI 303
            +  +   +     +    ++  +G   S ++VP+V    +  +PYE++F++N L+  G I
Sbjct: 251  DILKSLPFSGNLGE--LTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKI 310

Query: 304  PGPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQ-YKKYAKHP---S 363
                ++   ++ +    + V+      EK+  L+  CY P  F+ ++ Y     H    S
Sbjct: 311  VAKHVNADLFKALQ--ELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLS 370

Query: 364  NSPAIALDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDK 423
            N      +  L+   RV ITP K++  GPE  V+N V++H S    +F+RV+FVDE+W K
Sbjct: 371  NEGEGEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSK 430

Query: 424  MRSTDLLPRMASSIENG--KTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMF 483
            + S  +  R+     +   KT +Y RILS+LK G +IG K F+FLAFS+SQLR NS+WMF
Sbjct: 431  LSSNAISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMF 490

Query: 484  ASRPGLDAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHG 543
            AS   L+A  IR WMG F++I++ +K AAR+GQ F SS +T  V R + E+IPDIE+   
Sbjct: 491  ASNASLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTD 550

Query: 544  EVKYVFSDGIGKISSDFAKRVASKCVLAFT--PSAFQIRYGGYKGVVAVDPRSSVKLSLR 603
              KY+FSDGIGKIS  FAKRVA    L  T  PSAFQIRYGGYKGV+A+DP SS+ LSLR
Sbjct: 551  GSKYIFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLR 610

Query: 604  KSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILT 663
             SM KFES++  L++  +SK QPC++NR++I+LLSTLG++DE+F   Q + + + + +LT
Sbjct: 611  PSMKKFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLT 670

Query: 664  DPLKAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFI 723
            +   A   L  +   E    +K +L+ GY+P  EPYLSM+L+  +E++L ++RT+ +I +
Sbjct: 671  NKEVALSVLGKLGGSETKTAVKMLLQ-GYEPSSEPYLSMILKAHQENRLTDIRTRCKIHV 730

Query: 724  PNGRAMMGCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNP 783
            P GR ++GCLDETG LEYGQV+++I+           ++  +       +VG V + KNP
Sbjct: 731  PKGRVLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNP 790

Query: 784  CLHPGDVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPP 843
            CLHPGD+RVL A+  P L  MVDC+VFPQ+G RPHPNECSG DLDGD+YF+ WD +LIP 
Sbjct: 791  CLHPGDIRVLEAIYDPDLVGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPE 850

Query: 844  RQIPPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAP 903
            +   PMDYT   P  +D  VT+E++Q++FV+YM+NDSLG I+ AH   AD+ P KARS  
Sbjct: 851  KVDTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPE 910

Query: 904  CIELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGI 963
            C++LA L S+AVDF KTG PA +P  L  +E+PDFME+ ++  Y S  V+GKL+R+  G 
Sbjct: 911  CLQLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGH 970

Query: 964  APNISYIRSFTRDVAM--RCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSE 1023
                    + +   A     YD D+E  G +++++ A  +  +Y+ KL  L++YY  + E
Sbjct: 971  MEKSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELE 1030

Query: 1024 SEIFSGNIMRMSKSFTRRRD-------AEAINLAARSLRKEARTWFNTKESGLDSGSDDL 1083
             EI +GNI   +K    +RD        + I  A  +L +EAR W  +         +D 
Sbjct: 1031 DEILTGNI--RNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRK-----EEDA 1090

Query: 1084 FAKASAWYHVTYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRER 1113
               ASAWY VTYH        D  +   + SFPW     L+ +K ++  +R R
Sbjct: 1091 SRMASAWYRVTYH-------PDRRRGKRFWSFPWIACDNLLAIKASSQLRRRR 1120

[Close]

BLAST of CmaCh04G000910 vs. Swiss-Prot
Match: SHL2_ORYSJ (Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SHL2 PE=2 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 2.9e-162
Identity = 377/1000 (37.70%), Postives = 545/1000 (54.50%), Query Frame = 1


Query: 143  EYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIYKKVAPSSGQIFDDPL-FNFFKE 202
            + + +    ++ +++L+RL       LL++L  AP ++ + A      F +P+ F+   +
Sbjct: 214  DVKLEFPVRDVLEVRLYRLDCS----LLLRLAAAPLVHYRTADDD---FHEPVPFDLLDD 273

Query: 203  VPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRRHFAYYEEFEDEFKLVDGG--- 262
              DD  +RT D TPS +IG+     +   + R  P   R   Y  E         GG   
Sbjct: 274  --DDPWIRTTDITPSGAIGRCGVYRISF-SARFWPKMDRALDYMRERRVAIVDCGGGWGP 333

Query: 263  -NGFSCSDDLV---PVVD-----SHPNVLLPYEIIFKVNVLVQNGCIPGPSLDTGFYRLV 322
              G +  D+L    P+ D      H   L  + ++F VN LV  G I    L   F+ L+
Sbjct: 334  RRGLTVRDELEFGEPMQDVFFCLQHAEGL-KFPLLFMVNALVHKGIINQHQLTPEFFSLL 393

Query: 323  DPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIALDAGLVYVRRV 382
              S   V     AL   +  K   ++    L +   + A++P    +   D     VRR+
Sbjct: 394  GRSEENVNVA--ALRDFWGDKFPVFDACGRLKKALNRVARNPKLLCSKVGDDH-AEVRRL 453

Query: 383  QITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDL-------LPRM 442
             ITP + Y   PEV  SNRVLRH+    D FLRV+F+DE    + +  L       +  +
Sbjct: 454  VITPTRAYCLPPEVERSNRVLRHYHEVADRFLRVTFMDEGMQVLNNNVLNSFTAPIVKDL 513

Query: 443  ASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAAVIR 502
             S+    KT +Y+R+  +L  G  +  +K+ FLAFSS+QLR+ S W FA         IR
Sbjct: 514  MSNFFQQKTTVYKRVRMLLTEGFHMCGRKYSFLAFSSNQLRDKSAWFFAEDRKTTVEAIR 573

Query: 503  EWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDGIGK 562
            +WMG F   KN AK+AAR+GQ F S+  T+++   E +   D +V H E  Y+FSDGIGK
Sbjct: 574  KWMGRFTS-KNVAKHAARMGQCFSSTYATVTMRPDEVDESFD-DVVHNE--YIFSDGIGK 633

Query: 563  ISSDFAKRVASKCVLAFTP-SAFQIRYGGYKGVVAV--DPRSSVKLSLRKSMCKFESDNT 622
            I+ D A  VA +  L   P SA+QIR+ G+KGV+AV        +L LR SM KFES++ 
Sbjct: 634  ITPDLALEVAERLQLTDNPPSAYQIRFAGFKGVIAVWQGHGDGTRLFLRPSMRKFESNHL 693

Query: 623  KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 682
             L+V+ ++K+QP FLNRQ+I LLS+L V D +F + Q   L  L+ IL+D   A E L  
Sbjct: 694  VLEVVSWTKFQPGFLNRQIIILLSSLNVPDSIFWQMQETMLSNLNNILSDRDVAFEVLTT 753

Query: 683  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 742
             S  ++ N    ML  G++P  EP+L  ML   R ++L +L  K+RIF+P GR +MGCLD
Sbjct: 754  -SCADDGNTAALMLSAGFEPRTEPHLKAMLLAIRSAQLQDLLEKARIFVPKGRWLMGCLD 813

Query: 743  ETGTLEYGQVFVQ--ISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRV 802
            E G LE GQ F++  + +     +   S F  S  ++  VI+G V +AKNPCLHPGDVR+
Sbjct: 814  ELGVLEQGQCFIRATVPSLNSYFVKHGSRFS-STDKNTEVILGTVVIAKNPCLHPGDVRI 873

Query: 803  LNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPP--RQIPPMD 862
            L AV+VP L+H+VDC+VFPQKG RPH NE SGSDLDGD+YFV WD +LIPP  +   PMD
Sbjct: 874  LEAVDVPELHHLVDCLVFPQKGERPHANEASGSDLDGDLYFVTWDEKLIPPGKKSWNPMD 933

Query: 863  YTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKL 922
            Y+P    QL R V+  D+ ++F+  M++++LG I NAH   AD   + A    CI LA+L
Sbjct: 934  YSPPEAKQLPRQVSQHDIIDFFLKNMISENLGRICNAHVVHADLSEYGAMDEKCIHLAEL 993

Query: 923  FSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYI 982
             + AVDFPKTG  AI+P HL  K +PDFM K D  SY+S+ ++G+L+R+++  A N   +
Sbjct: 994  AATAVDFPKTGKLAIMPPHLKPKVYPDFMGKEDGQSYKSEKILGRLYRSIQE-ASNGDVV 1053

Query: 983  RSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIM 1042
                       YD D+E  G  D++  A   K  YD +L  LL  Y +++E+E+ +G+I 
Sbjct: 1054 SQEVCTPNDLPYDIDLEVPGASDFLASAWQCKCSYDAQLSALLSQYRVRTEAELVTGHIT 1113

Query: 1043 RMSKSFTRRRD--AEAINLAARSLRKEARTWFNTKESGLDSGSDD-----LFAKASAWYH 1102
             + K+ ++++    + +  A  +LRKE ++ F +  S      DD        KASAWY 
Sbjct: 1114 FLVKNSSKKQGDIKDRLKTAYSALRKEFKSTFESIASDQCEIGDDEKNLLYEMKASAWYQ 1173

Query: 1103 VTYHHSYWGSYN-----DGMKRDHYLSFPWCVYHKLMQVK 1104
            VTYH  +          DG +    LSF W     L ++K
Sbjct: 1174 VTYHPKWVEKSRGILGPDGEEIPASLSFAWIPVDYLARIK 1192

[Close]

BLAST of CmaCh04G000910 vs. TrEMBL
Match: A0A0S1YD00_CUCME (RNA-dependent RNA polymerase 1a OS=Cucumis melo GN=RDR1a PE=2 SV=1)

HSP 1 Score: 1914.4 bits (4958), Expect = 0.0e+00
Identity = 941/1131 (83.20%), Postives = 1021/1131 (90.27%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+HISGFPSH TAD+VK+FLE  TG GTVYAIKVRPPKRGG R+YAIVQFT A QAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LI+SLANQRLWYGSSYLKAR+ +VDIVPKP+TY++TL++L LCFGCQVSSEKF VLWEG+
Sbjct: 61   LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYTLKDLLLCFGCQVSSEKFRVLWEGN 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
            V+LVTFG+ MRKMNFHL +N VEYR +LSYENIWQIQLH  Q QSMK LLIQLYGAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            KKVAPSSGQIFD+P+ NFF EVPDDQ VRT DFT S SIGQSSSLCLKLPNG +LP F++
Sbjct: 181  KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +FAYYEEFE EF+L+D G  FS   DL P+VDS P+VL PYEIIFK+N LVQ+GCIP   
Sbjct: 241  NFAYYEEFEHEFRLIDEGASFSFCRDLAPIVDSRPHVL-PYEIIFKINALVQHGCIPWSL 300

Query: 301  LDTGFYRLVDPS-RIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360
            LDT FYRLV+    IR+E+VE+ALEKLFHLKEC Y+PS+FLTEQ+++Y++HP NSP I+L
Sbjct: 301  LDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420
            D GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFS+ +DNFLRVSFVDEEWDKMRSTDLL
Sbjct: 361  DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480
            PRM+S  E+ KTDIYRRILSVLKNGI IGDK F+FLAFSSSQLR+NSLWMFAS P +DAA
Sbjct: 421  PRMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAA 480

Query: 481  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540
             IR WMGDF+HIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIEVQHGEVKYVFSDG
Sbjct: 481  YIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDG 540

Query: 541  IGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
            IGKISS FAK VA+KC     PSAFQIRYGGYKGVVAVDP S++KLSLRKSMCKFESDN 
Sbjct: 541  IGKISSKFAKEVATKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNI 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
            KLDVLG+SKYQPCFLNRQLITLLSTLGV+DE+FEKKQSEA+EQLDAILTDPLKAQEALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
            MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
            ET TLEYGQVFVQIS  RHR++S++ AF+ SG E  LVI G VTVAKNPCLHPGDVRVL 
Sbjct: 721  ETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPR+I PMDYTPA
Sbjct: 781  AVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRRITPMDYTPA 840

Query: 841  PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
             PI+LDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAK FSIA
Sbjct: 841  LPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSIA 900

Query: 901  VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
            VDFPKTGVPAIIPSHL VKEFPDFMEKPDR SYESKNVIGKLFRAVK IAP +S+I+ FT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPFT 960

Query: 961  RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
            RDVA RCYD DME EGFEDYVEDA YHK+ YD KLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
            SFTRRRDAEAINLA RSLRKEARTWFN +E G DS SDDLFAKASAWY+VTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGYY 1080

Query: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDG 1131
            N+GMKRD+YLSFPWC+Y KLMQ+KENNLRKRERA+RLAT DRF  VLNL G
Sbjct: 1081 NEGMKRDYYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGYVLNLGG 1128

[Close]

BLAST of CmaCh04G000910 vs. TrEMBL
Match: E9NWK6_CUCSA (RNA-dependent RNA polymerase 1a OS=Cucumis sativus GN=RDR1a PE=2 SV=1)

HSP 1 Score: 1909.0 bits (4944), Expect = 0.0e+00
Identity = 935/1131 (82.67%), Postives = 1016/1131 (89.83%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+HISGFPSH TAD+VK+FLE  TG GTVYAIKVRPPKRGG R+YAIVQFT A QAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LIISLANQRLWYGSSYLKARA +VDIVPKPRTY++TLE L LCFGCQVS+EKF VLWEG+
Sbjct: 61   LIISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGN 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
            V+LVTFG+ MRKMNFHL +  VEYR +LSYE IWQIQLH  + QSMK LLIQL GAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            KKVAP+SGQIFD+PL NFFKE  DDQ VRT DFT S SIGQSSSLCLKLPNGRQLP F++
Sbjct: 181  KKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQ 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +FAYYEEFE EF+L+D    FS   DL P+VDS  +VL PY+I+FK+N LVQ GCIP P 
Sbjct: 241  NFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVL-PYKILFKINALVQYGCIPWPL 300

Query: 301  LDTGFYRLVDPS-RIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360
            LD  FYRLV+     R+E+VE+ALEKLFHLKEC Y+PS+FLTEQY+KY++HP NSP I+L
Sbjct: 301  LDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVISL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420
            D GLVYVRRVQITPCKV+FCGPEVNVSNRVLRHFS+ +DNFLRVSFVDEEWDKMRSTDLL
Sbjct: 361  DDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480
            PRM+S  E+GKTDIYRRILSVLKNGI IGDK F+FLAFSSSQLR+NSLWMFAS P +DAA
Sbjct: 421  PRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAA 480

Query: 481  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540
             IR WMGDF+HIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIEVQ GE+KYVFSDG
Sbjct: 481  YIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSDG 540

Query: 541  IGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
            IGKISS FAK VA+KC     PSAFQIRYGGYKGVVAVDP S++KLSLRKSMCKFESDNT
Sbjct: 541  IGKISSKFAKEVAAKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNT 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
            KLDVLG+SKYQPCFLNRQLITL+STLGV+DE+FEKKQSEA+EQLDAILTDPLKAQEALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
            MSPGENTNILKEMLKCGY+PDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
            ET TLEYGQVFVQIS+ RHR++S++ AF+  G E HLVI GNVTVAKNPCLHPGDVRVL 
Sbjct: 721  ETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP RQIPPMDYTPA
Sbjct: 781  AVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPA 840

Query: 841  PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
            PP +LDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFS+A
Sbjct: 841  PPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFSVA 900

Query: 901  VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
            VDFPKTGVPAIIPSHL VKEFPDFMEKPDR SYES  VIGKLFRAVK IAP +S+IRSFT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFT 960

Query: 961  RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
            RDVA RCYD DME EGFEDYVEDA YHK+ YDYKLGNLLDYYGIKSE+E+ SG+IMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
            SFTRRRDAEAINLA RSLRKEARTWFN +E G DS SDDLFAKASAWY+VTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGCY 1080

Query: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDG 1131
            N+GMKRDHYLSFPWCVY KLMQ+KENNLR+RERA+RLA+ DRF  VLNL G
Sbjct: 1081 NEGMKRDHYLSFPWCVYDKLMQIKENNLRRRERAARLASFDRFGHVLNLGG 1129

[Close]

BLAST of CmaCh04G000910 vs. TrEMBL
Match: B9HJH7_POPTR (RNA-directed RNA Polymerase family protein OS=Populus trichocarpa GN=POPTR_0008s13550g PE=4 SV=1)

HSP 1 Score: 1580.1 bits (4090), Expect = 0.0e+00
Identity = 777/1133 (68.58%), Postives = 919/1133 (81.11%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            M KTV +SGFPS  TA +V+ FLE  TG GTV A+K+R  + GG+R YAIVQFT    AE
Sbjct: 1    MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
             IISLAN RLWYG SYL AR  D DI+P+PR+++HT+E++TL FG Q S EKF  +W G+
Sbjct: 61   QIISLANPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGN 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
               V FG+ MRK++F L HN  EY+  L +ENIWQI+LHR + Q++K LLIQLYGAPRIY
Sbjct: 121  NVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            ++  PSS  +F+DPL N+F++VPD+Q VRT DFTPS  IG SSSLCL+LPN  QLPNF  
Sbjct: 181  ERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNE 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +F YY+E E  F L + G  FS + DLVP+V     V LPY I+F+VN+LVQNGC+ G  
Sbjct: 241  NFFYYKENEGTFVL-ESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSM 300

Query: 301  LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKY--AKHPSNSPAIA 360
            LD  FYRLVDP+R+ V  +E ALEKL+HLKECCYEPS +  EQYKKY  + +P  SP ++
Sbjct: 301  LDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDL 420
            LDAGLVYV +VQITPCKV+FCGPEVNVSNRVLR +  D+DNFLRVSFVDEE +K+ STD+
Sbjct: 361  LDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDV 420

Query: 421  LPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDA 480
             PR +S  E  +T IY RILS L+NGI IGDKKF+FLAFSSSQLRENS WMFASR GL A
Sbjct: 421  SPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTA 480

Query: 481  AVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSD 540
            A IR WMG F  I+N A+YAARLGQSFGSSTETLSV+ HE EIIPDIEV  G  +Y+FSD
Sbjct: 481  ADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSD 540

Query: 541  GIGKISSDFAKRVASKC-VLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESD 600
            GIGKIS++FA++VA KC    FTPSAFQIRY GYKGVVAVDP SS KLSLR+SM K+ES+
Sbjct: 541  GIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESE 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEAL 660
            NTKLDVL +SKYQPCFLNRQLITLLSTLGV D  FE+KQ EA++QLDA+LTDPL+AQEAL
Sbjct: 601  NTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEAL 660

Query: 661  ELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEML CGY+PD EP+LSMMLQTFR SKLLELRTK+RIFIPNGR+MMGC
Sbjct: 661  ELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGC 720

Query: 721  LDETGTLEYGQVFVQISNARHRHISDTS-AFDMSGSEDHLVIVGNVTVAKNPCLHPGDVR 780
            LDET TLE+GQVFV+ S +R R++ D+S  F   G     +I G+V VAKNPCLHPGD+R
Sbjct: 721  LDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLR 780

Query: 781  VLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDY 840
            +L AV+VP L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP +QI PMDY
Sbjct: 781  ILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDY 840

Query: 841  TPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLF 900
            TP PP+QLD DVTIE+V+EYF NY+VNDSLG+IANAHTA ADKE  KA S PC+ELA+ F
Sbjct: 841  TPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKF 900

Query: 901  SIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIR 960
            SIAVDFPKTGVPA IPS+L  +E+PDFMEKPD+ SYES+NVIGKLFR VK IAP  S IR
Sbjct: 901  SIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIR 960

Query: 961  SFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMR 1020
            SFT DVA +CYD DME +GFEDY++DA Y+K+ YDYKLGNL++YYGIK+E+E+ SG+ M+
Sbjct: 961  SFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMK 1020

Query: 1021 MSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYW 1080
            MSKSFT++RDAEAI +A RSL+KEAR+WFN K SGLDS +DD+ AKASAWYHVTYHH+YW
Sbjct: 1021 MSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYW 1080

Query: 1081 GSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDR-FSRVLNL 1129
            G YN+GM RDH+LSFPWCVY KL+Q+K  N  +  R+  L +++R FSR L+L
Sbjct: 1081 GCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLHL 1132

[Close]

BLAST of CmaCh04G000910 vs. TrEMBL
Match: A0A061EGF4_THECC (RNA-dependent RNA polymerase 1 isoform 1 OS=Theobroma cacao GN=TCM_011292 PE=4 SV=1)

HSP 1 Score: 1541.2 bits (3989), Expect = 0.0e+00
Identity = 775/1132 (68.46%), Postives = 911/1132 (80.48%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+ +S FPS+  A+ VK+FLEL TG  TVYA+K+R  K GG R YAIVQFT +  AE
Sbjct: 1    MGKTIQVSRFPSNVHAEEVKTFLELYTGKETVYALKIRQQKNGG-RAYAIVQFTKSTDAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LII L NQRL+YGSSYLKAR  + DIVPKPRT++HT+E +TL FGCQVS+EKF+VLWE  
Sbjct: 61   LIIRLTNQRLYYGSSYLKAREMENDIVPKPRTFLHTMEGVTLHFGCQVSNEKFYVLWEEV 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
               V FG+ MRK+ F L H+ VEYR  L YENIWQI+LHR ++Q+ K LLIQL+GAPRIY
Sbjct: 121  DVTVNFGMGMRKLQFLLSHHCVEYRLDLFYENIWQIELHRPRNQTSKYLLIQLFGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            +K   SSG +F++PL N+F +VPDDQ VRT DFT S  IGQSS LCL+LP   QLPNFR 
Sbjct: 181  EKDVRSSGLVFENPLLNYFMDVPDDQWVRTTDFTQSSCIGQSSVLCLELPYYLQLPNFRE 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +FAYY+E E +F L + G+ +S + +LVP+V     + LPYEI+FK+N+LVQNGCIPGP+
Sbjct: 241  NFAYYKESEGKFVL-ESGSSYSRNLNLVPIVGPSLGIDLPYEILFKINLLVQNGCIPGPA 300

Query: 301  LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSN--SPAIA 360
            LD  FYRLV+P RI   Y+++ALEKL++LKECC+EPS +L EQYK Y     N  SP I+
Sbjct: 301  LDANFYRLVNPCRIDKVYIDHALEKLYYLKECCFEPSKWLLEQYKGYIASKKNPGSPVIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDL 420
            LD GLV VRRVQITP +VYFCGPE+NVSNRVLRHF  D+DNFLR++FVDEE +K+ STDL
Sbjct: 361  LDDGLVNVRRVQITPSRVYFCGPEINVSNRVLRHFHDDIDNFLRITFVDEELEKIHSTDL 420

Query: 421  LPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDA 480
            L R      N  T+IY RILS LKNGI IGDK+F+FLAFSSSQLRENS WMFASR GL A
Sbjct: 421  LTR------NRITEIYGRILSTLKNGIVIGDKQFEFLAFSSSQLRENSAWMFASREGLTA 480

Query: 481  AVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSD 540
            A IR WMG+F  I+N AKYAARLGQSF SSTETLSVA+ E EII D+E++   + YVFSD
Sbjct: 481  ADIRTWMGEFSKIRNVAKYAARLGQSFSSSTETLSVAKDEIEIIDDVEIKRDGINYVFSD 540

Query: 541  GIGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESD 600
            GIGKIS+ FAK+VA+KC L   TPSAFQIR GG+KGVVAVDP SS KLSLR SM K+ES+
Sbjct: 541  GIGKISAKFAKKVAAKCRLNGRTPSAFQIRIGGFKGVVAVDPTSSKKLSLRGSMSKYESE 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEAL 660
            NTKLDVL +SKYQPCFLNRQLITLLSTLGV D  FE+KQ E ++QL+AILTDPLKAQEAL
Sbjct: 601  NTKLDVLAWSKYQPCFLNRQLITLLSTLGVPDHAFEEKQREVVDQLNAILTDPLKAQEAL 660

Query: 661  ELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEML CGY+PD EP+LSMMLQTFR SKLLELRTKSRIF+ NGR+MMGC
Sbjct: 661  ELMSPGENTNILKEMLLCGYEPDAEPFLSMMLQTFRASKLLELRTKSRIFVANGRSMMGC 720

Query: 721  LDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRV 780
            LDET TL+YGQVFVQ+S +R              SE   ++ G V VAKNPCLHPGDVRV
Sbjct: 721  LDETRTLDYGQVFVQVSGSR--------------SEQRFIVQGKVVVAKNPCLHPGDVRV 780

Query: 781  LNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYT 840
            L AVNVP L+HMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIP +QIPPMDY+
Sbjct: 781  LTAVNVPDLHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPSKQIPPMDYS 840

Query: 841  PAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFS 900
            PAP   L+ +VTIE+V+EYF NY+VNDSLGIIANAHT FAD+EP KA S+ C  LAKLFS
Sbjct: 841  PAPTKPLEHEVTIEEVEEYFTNYIVNDSLGIIANAHTVFADREPRKAMSSECKWLAKLFS 900

Query: 901  IAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRS 960
            IAVDFPKTGVPA IP  L VKE+PDFMEKPD+ +Y+S NVIGKLFR VK +APN  +IRS
Sbjct: 901  IAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPTYQSYNVIGKLFREVKDLAPNECFIRS 960

Query: 961  FTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRM 1020
             TR+   R YD DME +G+EDYV+DA YHK+ YDYKLGNL++YYGIK+E+EI SG IM+M
Sbjct: 961  LTRERLERFYDPDMEVDGYEDYVDDAFYHKSNYDYKLGNLMEYYGIKTEAEILSGGIMKM 1020

Query: 1021 SKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWG 1080
            S+SFT++RDAEAI +A RSLRKEAR+WFN K +GLDS +DDL+AKASAWYHVTYH SYWG
Sbjct: 1021 SRSFTKQRDAEAIGVAVRSLRKEARSWFNEKGNGLDSEADDLYAKASAWYHVTYHPSYWG 1080

Query: 1081 SYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDR-FSRVLNL 1129
             YN+GM R+H+LSFPWCVY KL+ +K+    +R   SRL++L+  F+R L L
Sbjct: 1081 LYNEGMNRNHFLSFPWCVYDKLILIKKKVTSRRN--SRLSSLESLFARGLRL 1108

[Close]

BLAST of CmaCh04G000910 vs. TrEMBL
Match: W9RFK1_9ROSA (RNA-dependent RNA polymerase 1 OS=Morus notabilis GN=L484_006779 PE=4 SV=1)

HSP 1 Score: 1530.4 bits (3961), Expect = 0.0e+00
Identity = 763/1134 (67.28%), Postives = 907/1134 (79.98%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+ +SGFPSH +A+SVK FLE  TG GTVYAIK+RP K GGSR YAIVQF     AE
Sbjct: 1    MGKTIQLSGFPSHVSAESVKEFLEGHTGRGTVYAIKIRPTKNGGSRSYAIVQFMTVETAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LII LAN RLWYG SYL AR  + DIVPKPR  +++L+N+TL FGCQ+S EKF  LW   
Sbjct: 61   LIIRLANPRLWYGRSYLLARVMERDIVPKPRATLYSLQNVTLHFGCQISKEKFSFLWRVG 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
               V FG+ +R++NF+L +  VEYR QL YEN+WQI+LHR + Q+ K LLIQL GAPR+Y
Sbjct: 121  NVSVDFGLGLRRLNFYLTYGPVEYRLQLLYENVWQIELHRPRGQTAKYLLIQLLGAPRVY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            +K    S  I ++PLFN+FK+ PDDQ VR  DFT S  IG SS+L L+LP G  LP+ R 
Sbjct: 181  EKEVRISFDILENPLFNYFKDTPDDQWVRATDFTESCCIGHSSALYLELPYGVDLPDLRE 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +F YY+E E+ F +++ G+ FS + DLVP+V     + LP+E +FK+N+L+QNGC+ GP+
Sbjct: 241  NFVYYKESEERF-ILESGSSFSRNLDLVPIVGPPSGINLPFETVFKINMLLQNGCLSGPT 300

Query: 301  LDTGFYRLVDPSRIR-VEYVENALEKLFHLKECCYEPSSFLTEQYKKY--AKHPSNSPAI 360
            LD  FYRLVDP RIR V+ +  ALEKLF+LKEC YEP+++L EQY+KY  A  P   PAI
Sbjct: 301  LDVDFYRLVDPQRIRNVDCINYALEKLFNLKECPYEPAAWLNEQYRKYLTAPRPPKPPAI 360

Query: 361  ALDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTD 420
            ALD+GLVYVRRVQ+TP KVYFCGPE+NVSNRVLR +   +D FLRVSFVDEE +K+ STD
Sbjct: 361  ALDSGLVYVRRVQVTPSKVYFCGPEINVSNRVLREYIDYIDYFLRVSFVDEELEKLFSTD 420

Query: 421  LLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLD 480
            L PR +++ E+ +T IYRRILSVL+NGI IGD+KF+FLAFSSSQLR+NSLWMFA+  G  
Sbjct: 421  LSPRTSNANEDRRTGIYRRILSVLRNGIEIGDRKFEFLAFSSSQLRDNSLWMFAAVDGHS 480

Query: 481  AAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFS 540
            A  IR+W+GDF+ I+N AKYAARLGQSFGSSTETL+V   E E+I DIE++ G VKYVFS
Sbjct: 481  ADTIRQWIGDFRSIRNVAKYAARLGQSFGSSTETLTVDESETEVISDIEIERGAVKYVFS 540

Query: 541  DGIGKISSDFAKRVASKCVLA-FTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFES 600
            DGIGKISS FAKRVA KC L    PSAFQIRY GYKGVVAVDP SS KLSLRKSM K+ES
Sbjct: 541  DGIGKISSTFAKRVAKKCGLKDCVPSAFQIRYCGYKGVVAVDPTSSTKLSLRKSMWKYES 600

Query: 601  DNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEA 660
            +  KLDVL YSK Q C+LNRQLITLLSTLGV D VFEKKQ EA++QL+AIL DPL+A+EA
Sbjct: 601  ELHKLDVLAYSKLQHCYLNRQLITLLSTLGVGDRVFEKKQREAVQQLNAILNDPLRAREA 660

Query: 661  LELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMG 720
            L+LMS GE TNILKE+L CGY+P+ EP+LSMMLQ FR SKL ELRTK+RI IP+GRAMMG
Sbjct: 661  LDLMSAGETTNILKELLSCGYQPNAEPFLSMMLQAFRASKLQELRTKTRISIPDGRAMMG 720

Query: 721  CLDETGTLEYGQVFVQISNARHR-HISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDV 780
            CLDE  TLEYG+VFVQ S   HR    D+     +GS  + ++VG V VAKNPCLHPGDV
Sbjct: 721  CLDEMRTLEYGEVFVQFSGITHRPFFEDSFMLGGTGSGQNYIVVGRVVVAKNPCLHPGDV 780

Query: 781  RVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMD 840
            RVL AVNVP L+HMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIP +Q  PMD
Sbjct: 781  RVLRAVNVPALHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDDELIPQKQFEPMD 840

Query: 841  YTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKL 900
            Y+PAP  +LD DV IE+VQEYF NY+VNDSLGIIANAHTAFADKEP KA S  CIELA+L
Sbjct: 841  YSPAPTTRLDHDVRIEEVQEYFTNYIVNDSLGIIANAHTAFADKEPSKAMSPSCIELARL 900

Query: 901  FSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYI 960
            FSIAVDFPKTGVPA+IP  L VKE+PDFMEK ++ +YES+NVIGKLFR VK IAPN+  +
Sbjct: 901  FSIAVDFPKTGVPAVIPQELYVKEYPDFMEKLNKPTYESQNVIGKLFREVKDIAPNVGSL 960

Query: 961  RSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIM 1020
              FT++VA R YD DME +GFEDY++DA Y+K+ YDYKLGNLLDYYGIKSE+EI  G+IM
Sbjct: 961  HFFTKEVASRSYDPDMEYDGFEDYIDDAFYYKSNYDYKLGNLLDYYGIKSEAEIIGGSIM 1020

Query: 1021 RMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSY 1080
            RMSKSFT+RRDAE+IN+A R+LRKEARTWFN K S LDS +DD++AKASAWY+VTYHHSY
Sbjct: 1021 RMSKSFTKRRDAESINMAVRALRKEARTWFNEKGSSLDSAADDVYAKASAWYYVTYHHSY 1080

Query: 1081 WGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDR-FSRVLNL 1129
            WG YN+GM RDHYLSFPWCVY KL+Q+K +    R R+ ++++L+R F R L+L
Sbjct: 1081 WGCYNEGMNRDHYLSFPWCVYDKLVQIKRSKASVR-RSLQMSSLERAFDRRLHL 1132

[Close]

BLAST of CmaCh04G000910 vs. TAIR10
Match: AT1G14790.1 (AT1G14790.1 RNA-dependent RNA polymerase 1)

HSP 1 Score: 1396.3 bits (3613), Expect = 0.0e+00
Identity = 707/1129 (62.62%), Postives = 848/1129 (75.11%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+ + GFP+  +A+ VK FLE  TG GTVYAIKVR PK+GG RVYAIVQFT      
Sbjct: 1    MGKTIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKVRQPKKGGPRVYAIVQFTSERHTR 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LII+ A +RL+YG SYLKA   + DIVPKPR  +HT+  L + FGCQVS++KF  LW   
Sbjct: 61   LIITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQ 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
               V+FG+ MRK++F       +YR +LSYENIWQI LH  Q +S K L+IQ+ GAP+I+
Sbjct: 121  DVCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIF 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            +K       +F   + +F+ +  D+Q +RT DFT S  IGQS++ CL+LP    +P+FR 
Sbjct: 181  EKEDQPINLLFG--IMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCS-DDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGP 300
            +FA Y E      L++ G+ +S + + LVPVVD  P   LP+EI+FK+N LVQN C+ GP
Sbjct: 241  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 300

Query: 301  SLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKY---AKHPSNSPA 360
            +LD  FYRL++  +     +++ LEKLFHL ECCYEP+ +L ++YKK+    K P  SP 
Sbjct: 301  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGKLPL-SPT 360

Query: 361  IALDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRST 420
            I+LD GLVY+ RVQ+TP +VYF GPEVNVSNRVLRH+S+ ++NFLRVSFVDE+ +K+RS 
Sbjct: 361  ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 420

Query: 421  DLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGL 480
            DL PR ++     +T +Y RI SVL++GI IGDKKF+FLAFSSSQLRENS WMFA    +
Sbjct: 421  DLSPRSSTQ---RRTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAPIDRI 480

Query: 481  DAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVF 540
             AA IR WMGDF HI+N AKYAARLGQSF SS ETL+V   E E+IPD+E+     +YVF
Sbjct: 481  TAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGTRYVF 540

Query: 541  SDGIGKISSDFAKRVASKCVLA-FTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFE 600
            SDGIGKIS++FA++VA KC L  F+PSAFQIRYGGYKGVVAVDP SS KLSLRKSM KFE
Sbjct: 541  SDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSMSKFE 600

Query: 601  SDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQE 660
            S+NTKLDVL +SKYQPC++NRQLITLLSTLGV D VFEKKQ E +++LDAILT PL+A E
Sbjct: 601  SENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPLEAHE 660

Query: 661  ALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMM 720
            AL LM+PGENTNILK ++ CGYKPD EP+LSMMLQ FR SKLLELRTK+RIFI  GR+MM
Sbjct: 661  ALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGGRSMM 720

Query: 721  GCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDV 780
            GCLDET TLEYGQV VQ S             D        +I G V VAKNPCLHPGDV
Sbjct: 721  GCLDETRTLEYGQVVVQYS-------------DPMRPGRRFIITGPVVVAKNPCLHPGDV 780

Query: 781  RVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMD 840
            RVL AVNVP L HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD EL+PPR   PMD
Sbjct: 781  RVLQAVNVPALNHMVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPRTSEPMD 840

Query: 841  YTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKL 900
            YTP P   LD DVTIE+V+EYF NY+VNDSLGIIANAHTAFADKEP KA S PCIELAK 
Sbjct: 841  YTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPCIELAKK 900

Query: 901  FSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYI 960
            FS AVDFPKTGV A+IP HL VKE+PDFMEKPD+ +YESKNVIGKLFR VK  AP +  I
Sbjct: 901  FSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERAPPLISI 960

Query: 961  RSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIM 1020
            +SFT DVA + YD DME +GFE+YV++A Y K  YD+KLGNL+DYYGIK+E+EI SG IM
Sbjct: 961  KSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEILSGGIM 1020

Query: 1021 RMSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSY 1080
            RMSKSFT+RRDAE+I  A R+LRKE  + FN  E       ++  AKASAWYHVTYH SY
Sbjct: 1021 RMSKSFTKRRDAESIGRAVRALRKETLSLFNASEE-----EENESAKASAWYHVTYHSSY 1080

Query: 1081 WGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSR 1125
            WG YN+G+ RDH+LSF WCVY KL+++K+ NL +R+R   L  LD   R
Sbjct: 1081 WGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQRQETLERLDHVLR 1105

[Close]

BLAST of CmaCh04G000910 vs. TAIR10
Match: AT4G11130.1 (AT4G11130.1 RNA-dependent RNA polymerase 2)

HSP 1 Score: 763.1 bits (1969), Expect = 2.5e-220
Identity = 452/1144 (39.51%), Postives = 668/1144 (58.39%), Query Frame = 1


Query: 4    TVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGG--SRVYAIVQFTGA---AQ 63
            TV IS  P    AD +  FLEL  G  TV+A+++ P  R     R +A VQFT     ++
Sbjct: 11   TVKISNVPQTIVADELLRFLELHLGEDTVFALEI-PTTRDNWKPRDFARVQFTTLEVKSR 70

Query: 64   AELIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEK-FHVLW 123
            A+L+ S    +L + +  L+   A  DI+P+P      L+++ L  G   S EK F  L 
Sbjct: 71   AQLLSS--QSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALE 130

Query: 124  EGDVELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMK--CLLIQLYG 183
            + D        E R++ F +  +   Y+ ++ +E+I +     +   + +    L++L  
Sbjct: 131  KWDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKY 190

Query: 184  APRIYKKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQL 243
             P+++K+V       F    + F KE  D   +RT DF+ S SIG S+  CL++ NG  +
Sbjct: 191  GPKVFKRVTVHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 250

Query: 244  PNFRRHFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVL-LPYEIIFKVNVLVQNG 303
             +      YY E       VDG   F+ +  +VP++++    L  PYEI+F++N LV   
Sbjct: 251  LDIFSGLPYYREDTLSLTYVDGKT-FASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQ 310

Query: 304  CIP-GPSLDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSN 363
             I    + D    +++    +    V   L+KL      CY+P  F+  Q +   K   +
Sbjct: 311  KISLFAASDMELIKILRGMSLETALV--ILKKLHQQSSICYDPVFFVKTQMQSVVKKMKH 370

Query: 364  SPAIAL----DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEE 423
            SPA A     +  ++  +R  +TP K+Y  GPE+  +N V+++F+  + +F+RV+FV+E+
Sbjct: 371  SPASAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEED 430

Query: 424  WDKMRSTDLLPRMASS--IENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSL 483
            W K+ +  L         ++  +T+IY R+LS+L  GI +G K+F+FLAFS+SQLR NS+
Sbjct: 431  WSKLPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSV 490

Query: 484  WMFASRPGLDAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEV 543
            WMFAS   + A  IREWMG F+ I++ +K AAR+GQ F +S +TL V   + E IPDIEV
Sbjct: 491  WMFASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEV 550

Query: 544  QHGEVKYVFSDGIGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSL 603
                  Y FSDGIGKIS  FAK+VA KC L+  PSAFQIRYGGYKGV+AVD  S  KLSL
Sbjct: 551  TTDGADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSL 610

Query: 604  RKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAIL 663
            R SM KF+S+N  L+V  +++  PCFLNR++I LLSTLG++D +FE  Q+  L  L  +L
Sbjct: 611  RDSMLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNML 670

Query: 664  TDPLKAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIF 723
             D   A   L+ +S   + N+L +ML  GY P  EPYLSMML+   ES+L EL+++ RI 
Sbjct: 671  EDRDAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRIL 730

Query: 724  IPNGRAMMGCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKN 783
            +P GR ++GC+DE G LEYGQV+V+++  +    S   ++     E+  V++G V V KN
Sbjct: 731  VPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKN 790

Query: 784  PCLHPGDVRVLNAVNVPLLYH--MVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTEL 843
            PCLHPGD+RVL+A+          +DC++FPQKG RPHPNECSG DLDGD +FV WD ++
Sbjct: 791  PCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKI 850

Query: 844  IPPRQIPPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKAR 903
            IP    PPMDY  + P  +D DVT+E++ ++FV+YM++D+LG+I+ AH   AD++P KAR
Sbjct: 851  IPSEMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKAR 910

Query: 904  SAPCIELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAV 963
            S  C+ELA L S AVDF KTG PA +P  L  +EFPDF+E+ ++ +Y S++V GKL+RAV
Sbjct: 911  SQKCLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAV 970

Query: 964  KGIAPNISYIRSFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKS 1023
            K    +++  +          YD  +E  GFE ++E A  H+ +Y  KL +L+ YYG  +
Sbjct: 971  KS---SLAQRKPEAESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAAN 1030

Query: 1024 ESEIFSGNI----MRMSKSFTRRRD-AEAINLAARSLRKEARTWFNTKESGLDSGSDDLF 1083
            E EI +G +    M +++   R  D  + I L+ + L KEA  WF        S  D+  
Sbjct: 1031 EEEILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFE------KSCEDEQQ 1090

Query: 1084 AK--ASAWYHVTYHHSYWGSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKR---ERASR 1120
             K  ASAWY+VTY+       N   ++  +LSFPW V   L+ +K  N +++   E+ S 
Sbjct: 1091 KKKLASAWYYVTYNP------NHRDEKLTFLSFPWIVGDVLLDIKAENAQRQSVEEKTSG 1133

[Close]

BLAST of CmaCh04G000910 vs. TAIR10
Match: AT3G49500.1 (AT3G49500.1 RNA-dependent RNA polymerase 6)

HSP 1 Score: 573.2 bits (1476), Expect = 3.6e-163
Identity = 384/1024 (37.50%), Postives = 550/1024 (53.71%), Query Frame = 1


Query: 143  EYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIYKKVAPSS------GQIFDDPLF 202
            +Y+ +L   +I  ++ ++  H  +  L++QL  +PR++ + A         G + DD   
Sbjct: 192  DYKLELLVRDIQTVRQYKTLHGFV--LILQLASSPRVWYRTADDDIYDTVPGDLLDD--- 251

Query: 203  NFFKEVPDDQCVRTADFTPSYSIGQSSS--LCLKLPNGRQLPNFRRHFAYYEEFEDEFKL 262
                   DD  +RT DFT   +IG+  S  + +      +L     +F      E+  + 
Sbjct: 252  -------DDPWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRW 311

Query: 263  VDGGNGFSCSDDLVPVVDS----HPNVLLPYEIIFKVNVLVQNGCIPGPSLDTGFYRLVD 322
                    C  +  PV D     H    + +EI+F VN ++  G      L   F+ L  
Sbjct: 312  PPRIRNEPCFGE--PVSDHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDL-- 371

Query: 323  PSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYA-------KHPSNSPAIALDAGL 382
               +R +  +  +  L HL  C Y+   F  + YK+         K+P    +      +
Sbjct: 372  ---LRNQPKDVNIASLKHL--CTYKRPVF--DAYKRLKLVQEWIQKNPKLLGSHEQSEDI 431

Query: 383  VYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDL----- 442
              +RR+ ITP + Y   PEV +SNRVLR +    + FLRV+F+DE    + S  L     
Sbjct: 432  SEIRRLVITPTRAYCLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVA 491

Query: 443  --LPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGL 502
              +  + SS  + KT +++R+ S+L +G  +  +K+ FLAFS++QLR+ S W FA     
Sbjct: 492  PIVKDLTSSSFSQKTYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKT 551

Query: 503  DAAVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREI-IPDIEVQHGEVKYV 562
              + I+ WMG F+  KN AK AAR+G  F S+  T+ V  HE +  +PDIE ++G   YV
Sbjct: 552  RVSDIKTWMGKFKD-KNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIE-RNG---YV 611

Query: 563  FSDGIGKISSDFAKRVASKCVLA--FTPSAFQIRYGGYKGVVAVDPRSS--VKLSLRKSM 622
            FSDGIG I+ D A  V  K  L   ++P A+QIRY G+KGVVA  P  S  ++L+LR SM
Sbjct: 612  FSDGIGTITPDLADEVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSM 671

Query: 623  CKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPL 682
             KF S +T L++  ++++QP FLNRQ+ITLLS LGV DE+F   Q   L +L+ IL D  
Sbjct: 672  KKFFSKHTILEICSWTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTD 731

Query: 683  KAQEALELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNG 742
             A E L   S  E  N    ML  G+KP  EP+L  ML + R ++L  LR KSRIF+ +G
Sbjct: 732  VAFEVLTA-SCAEQGNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSG 791

Query: 743  RAMMGCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSE------DHLVIVGNVTVA 802
            R +MGCLDE G LE+GQ F+Q+S       S  + F   GS       D  V+ G V +A
Sbjct: 792  RWLMGCLDEAGILEHGQCFIQVSKP-----SIENCFSKHGSRFKETKTDLEVVKGYVAIA 851

Query: 803  KNPCLHPGDVRVLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTEL 862
            KNPCLHPGDVR+L AV+VP L+HM DC++FPQKG RPH NE SGSDLDGD+YFV WD +L
Sbjct: 852  KNPCLHPGDVRILEAVDVPQLHHMYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKL 911

Query: 863  IPP--RQIPPMDYTPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFK 922
            IPP  +  P M Y  A    L R V  +D+ ++F   + N+ LG I NAH   AD+  + 
Sbjct: 912  IPPNRKSYPAMHYDAAEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYG 971

Query: 923  ARSAPCIELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFR 982
            A    C+ LA+L + AVDFPKTG    +P HL  K +PDFM K D  +Y+S  ++G+L+R
Sbjct: 972  AMDEECLLLAELAATAVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYR 1031

Query: 983  AVKGIAPNISYIRS-FTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYG 1042
             VK +    +   S  + D +   YD+ +E  GFED + +A  HK +YD +L  LL  Y 
Sbjct: 1032 RVKEVYDEDAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYK 1091

Query: 1043 IKSESEIFSGNIMRMSKSFTRRRD--AEAINLAARSLRKEARTWFNTKESGLDSGSDD-- 1102
            ++ E EI +G+I  M K  ++++    E +  +  SL+KE R  F       ++ S++  
Sbjct: 1092 VQKEEEIVTGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEK 1151

Query: 1103 ---LFAKASAWYHVTYHHSYWG---SYNDGMKRDH--YLSFPWCVYHKLMQVKENNLRKR 1115
                  KASAWYHVTYH  +        D  +  H   LSF W     L ++K   +R R
Sbjct: 1152 NILYEKKASAWYHVTYHPEWVKKSLELQDPDESSHAAMLSFAWIAADYLARIK---IRSR 1178

[Close]

BLAST of CmaCh04G000910 vs. TAIR10
Match: AT2G19930.1 (AT2G19930.1 RNA-dependent RNA polymerase family protein)

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-26
Identity = 160/640 (25.00%), Postives = 256/640 (40.00%), Query Frame = 1


Query: 398 DNFLRVSFVDEEWDKMRSTDLLPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAF 457
           DN L V F D +  K  ST  +            D Y     + KNGI IG ++++F  F
Sbjct: 242 DNVLTVKFADVQ--KSSSTYSI------------DHYFTYKGIAKNGIMIGLRRYQFFVF 301

Query: 458 SSSQLRENSLWMFASRPGLDAAVIREWMGDFQHIKNP----------------------- 517
                 E    +   +  +    IR     F  ++NP                       
Sbjct: 302 KDGGKEEKKKDLSTKK--VKCYFIRTDSTAFYDMQNPYILTGKSIYEARMHFMHVHRAPT 361

Query: 518 -AKYAARLGQSFGSSTETLSVARH--EREIIPDIEVQHGEVKYVF---------SDGIGK 577
            A Y AR      S T+TL V       + I DI     + K V          SDG G 
Sbjct: 362 LANYMARFSLIL-SKTKTLEVDMTGITFDQIDDIHCHDQDGKDVLDKNKKPCIHSDGTGY 421

Query: 578 ISSDFAKRVA-----SKCVLAFT---------PSAFQIR--YGGY--KGVVAVDPR---- 637
           IS D A+         KC+ + +         P   Q R  Y GY  KG   ++ +    
Sbjct: 422 ISEDLARMCPLNIFKGKCLRSESIQEACYQDPPLLIQFRMFYDGYAVKGTFLLNKKLCPR 481

Query: 638 ------SSVKLSLRKSMCKFESDNTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEK 697
                 S +K+S   S+  F + N    V   +  +   L++ L+ LLS  G+ +E F  
Sbjct: 482 TVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKRTKLSKNLVALLSYGGIPNEFFLD 541

Query: 698 KQSEALEQLDAILTDPLKAQEALELMSPGENTNILKEMLKCGY---KPDVEPYLSMMLQT 757
                LE+  +I  +   A  A       ++ N   +M+  G    +P ++ YLS++L+T
Sbjct: 542 ILLNTLEESKSIFYNKRAALNAALNYGEMDDQNAA-QMILVGIPLDEPHLKNYLSILLKT 601

Query: 758 FRESKLLELRTKSRIFIPNGRAMMGCLDETGTLEYGQVFVQISNARHRHISDTSAFDMSG 817
            +     +L+   ++ +     +MG +D TG L+  +V V + + +              
Sbjct: 602 EKN----DLKA-GKLPVTESYYLMGTVDPTGALKEDEVCVILESGQ-------------- 661

Query: 818 SEDHLVIVGNVTVAKNPCLHPGDVRVLNAVNVPLLYHMVD----CVVFPQKGSRPHPNEC 877
                 I G V V +NP LH GD+ +L A  V  L   V      V FPQKG R   +E 
Sbjct: 662 ------ISGEVLVYRNPGLHFGDIHILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEI 721

Query: 878 SGSDLDGDIYFVCWDTELI---PPRQIPPMDYTP-------APPIQLDRDVTIEDVQEYF 937
           +G D DGD+YF+  + EL+    P + P +  TP         P QL  +   E++ E F
Sbjct: 722 AGGDFDGDMYFISRNPELLENFKPSE-PWVSLTPPSKSNSGRAPSQLSPEELEEELFEMF 781

Query: 938 V--NYMVNDSLGIIANAHTAFADK---------EPFKARSAPCIELAKLFSIAVDFPKTG 947
           +   +  ++ +GI A++     D+         E         +EL  ++  A+D PK G
Sbjct: 782 LTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKG 835

[Close]

BLAST of CmaCh04G000910 vs. TAIR10
Match: AT2G19910.1 (AT2G19910.1 RNA-dependent RNA polymerase family protein)

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-24
Identity = 108/419 (25.78%), Postives = 177/419 (42.24%), Query Frame = 1


Query: 564 FQIRYGGY--KGVVAVDPRSSVK-LSLRKSMCKFESDNTKLDVLGYSKYQ---------P 623
           F+I Y GY  KG    + +   + + +R SM K   D T  ++  ++  +          
Sbjct: 455 FRIFYNGYAVKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRK 514

Query: 624 CFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALELMSPGENTNILKE 683
             L+R L+ LLS  GV ++ F       LE+   I      A +A       + T    +
Sbjct: 515 ARLSRNLVALLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINYGDDQYT---AD 574

Query: 684 MLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLDETGTLEYGQVFV 743
           M+  G   D EPYL   L    +++   L+   R  I     +MG +D TG L+  ++ V
Sbjct: 575 MILVGIPLD-EPYLKDRLSYLLKTERNALKA-GRFPIDESYYIMGTVDPTGELKENEICV 634

Query: 744 QISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLNAVNVPLLYHMVD 803
            + + +                    I G+V V +NP LH GD+ VL A  V  L   V 
Sbjct: 635 ILHSGQ--------------------ISGDVLVYRNPGLHFGDIHVLKATYVKALEDYVG 694

Query: 804 ----CVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP---------PRQIPPMDYTP 863
                V FPQKG R   +E +G D DGD+YF+  + +L+              P   Y  
Sbjct: 695 NAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKLLEHFKPSEPWVSSSKPSKIYCG 754

Query: 864 APPIQLDRDVTIEDVQEYFVN--YMVNDSLGIIANAHTAFAD----------KEPFKARS 923
             P +L  +   E++ + F+   +   D +G+ A+      D          KE ++ R 
Sbjct: 755 RKPSELSEEELEEELFKMFLKARFCKRDVIGMAADCWLGIMDPFLTLGDESAKEKYE-RK 814

Query: 924 APCIELAKLFSIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAV 946
              ++L  ++  A+D PK G    +P  L +K FP +ME+  +  + S +++G +F  V
Sbjct: 815 KNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTV 847

[Close]

BLAST of CmaCh04G000910 vs. NCBI nr
Match: gi|948561981|gb|ALM88236.1| (RNA-dependent RNA polymerase 1a [Cucumis melo])

HSP 1 Score: 1914.4 bits (4958), Expect = 0.0e+00
Identity = 941/1131 (83.20%), Postives = 1021/1131 (90.27%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+HISGFPSH TAD+VK+FLE  TG GTVYAIKVRPPKRGG R+YAIVQFT A QAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LI+SLANQRLWYGSSYLKAR+ +VDIVPKP+TY++TL++L LCFGCQVSSEKF VLWEG+
Sbjct: 61   LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYTLKDLLLCFGCQVSSEKFRVLWEGN 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
            V+LVTFG+ MRKMNFHL +N VEYR +LSYENIWQIQLH  Q QSMK LLIQLYGAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            KKVAPSSGQIFD+P+ NFF EVPDDQ VRT DFT S SIGQSSSLCLKLPNG +LP F++
Sbjct: 181  KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +FAYYEEFE EF+L+D G  FS   DL P+VDS P+VL PYEIIFK+N LVQ+GCIP   
Sbjct: 241  NFAYYEEFEHEFRLIDEGASFSFCRDLAPIVDSRPHVL-PYEIIFKINALVQHGCIPWSL 300

Query: 301  LDTGFYRLVDPS-RIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360
            LDT FYRLV+    IR+E+VE+ALEKLFHLKEC Y+PS+FLTEQ+++Y++HP NSP I+L
Sbjct: 301  LDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420
            D GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFS+ +DNFLRVSFVDEEWDKMRSTDLL
Sbjct: 361  DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480
            PRM+S  E+ KTDIYRRILSVLKNGI IGDK F+FLAFSSSQLR+NSLWMFAS P +DAA
Sbjct: 421  PRMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAA 480

Query: 481  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540
             IR WMGDF+HIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIEVQHGEVKYVFSDG
Sbjct: 481  YIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDG 540

Query: 541  IGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
            IGKISS FAK VA+KC     PSAFQIRYGGYKGVVAVDP S++KLSLRKSMCKFESDN 
Sbjct: 541  IGKISSKFAKEVATKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNI 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
            KLDVLG+SKYQPCFLNRQLITLLSTLGV+DE+FEKKQSEA+EQLDAILTDPLKAQEALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
            MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
            ET TLEYGQVFVQIS  RHR++S++ AF+ SG E  LVI G VTVAKNPCLHPGDVRVL 
Sbjct: 721  ETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPR+I PMDYTPA
Sbjct: 781  AVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRRITPMDYTPA 840

Query: 841  PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
             PI+LDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAK FSIA
Sbjct: 841  LPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSIA 900

Query: 901  VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
            VDFPKTGVPAIIPSHL VKEFPDFMEKPDR SYESKNVIGKLFRAVK IAP +S+I+ FT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPFT 960

Query: 961  RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
            RDVA RCYD DME EGFEDYVEDA YHK+ YD KLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
            SFTRRRDAEAINLA RSLRKEARTWFN +E G DS SDDLFAKASAWY+VTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGYY 1080

Query: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDG 1131
            N+GMKRD+YLSFPWC+Y KLMQ+KENNLRKRERA+RLAT DRF  VLNL G
Sbjct: 1081 NEGMKRDYYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGYVLNLGG 1128

[Close]

BLAST of CmaCh04G000910 vs. NCBI nr
Match: gi|659130594|ref|XP_008465250.1| (PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo])

HSP 1 Score: 1914.0 bits (4957), Expect = 0.0e+00
Identity = 941/1132 (83.13%), Postives = 1019/1132 (90.02%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+HISGFPSH TAD+VK+FLE  TG GTVYAIKVRPPKRGG R+YAIVQFT A QAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LI+SLANQRLWYGSSYLKAR+ +VDIVPKP+TY++ L++L LCFGCQVSSEKF VLWEG+
Sbjct: 61   LIVSLANQRLWYGSSYLKARSTEVDIVPKPKTYMYMLKDLLLCFGCQVSSEKFRVLWEGN 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
            V+LVTFG+ MRKMNFHL +N VEYR +LSYENIWQIQLH  Q QSMK LLIQLYGAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYNSVEYRLELSYENIWQIQLHSPQCQSMKYLLIQLYGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            KKVAPSSGQIFD+P+ NFF EVPDDQ VRT DFT S SIGQSSSLCLKLPNG +LP F++
Sbjct: 181  KKVAPSSGQIFDNPILNFFMEVPDDQWVRTTDFTSSCSIGQSSSLCLKLPNGLELPTFKQ 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +FAYYEEFE EF+L+D    FS   DL P+VDS P+VL PYEIIFK+N LVQ+GCIP   
Sbjct: 241  NFAYYEEFEHEFRLIDEDASFSFCRDLAPIVDSRPHVL-PYEIIFKINALVQHGCIPWSL 300

Query: 301  LDTGFYRLVDPS-RIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360
            LDT FYRLV+    IR+E+VE+ALEKLFHLKEC Y+PS+FLTEQ+++Y++HP NSP I+L
Sbjct: 301  LDTSFYRLVERIITIRIEFVEHALEKLFHLKECNYDPSNFLTEQFRRYSRHPPNSPVISL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420
            D GLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFS+ +DNFLRVSFVDEEWDKMRSTDLL
Sbjct: 361  DDGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSKYIDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480
            PRM+S  E+ KTDIYRRILSVLKNGI IGDK F+FLAFSSSQLR+NSLWMFAS P +DAA
Sbjct: 421  PRMSSKSEDSKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAA 480

Query: 481  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540
             IR WMGDF+HIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIEVQHGEVKYVFSDG
Sbjct: 481  YIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQHGEVKYVFSDG 540

Query: 541  IGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
            IGKISS FAK VA+KC     PSAFQIRYGGYKGVVAVDP S++KLSLRKSMCKFESDN 
Sbjct: 541  IGKISSKFAKEVATKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNI 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
            KLDVLG+SKYQPCFLNRQLITLLSTLGV+DE+FEKKQSEA+EQLDAILTDPLKAQEALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLLSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
            MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
            ET TLEYGQVFVQIS  RHR++S++ AF+ SG E  LVI G VTVAKNPCLHPGDVRVL 
Sbjct: 721  ETMTLEYGQVFVQISGGRHRNLSESFAFN-SGQEHCLVIEGKVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVNVP LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQI PMDYTPA
Sbjct: 781  AVNVPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQITPMDYTPA 840

Query: 841  PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
             PI+LDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKEPFKARS+PC+ELAK FSIA
Sbjct: 841  LPIELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSSPCVELAKQFSIA 900

Query: 901  VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
            VDFPKTGVPAIIPSHL VKEFPDFMEKPDR SYESKNVIGKLFRAVK IAP +S+I+ FT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESKNVIGKLFRAVKDIAPTLSHIQPFT 960

Query: 961  RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
            RDVA RCYD DME EGFEDY EDA YHK+ YD KLGNLLDYYGIKSE+EI SG+IMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYFEDAFYHKSNYDDKLGNLLDYYGIKSEAEILSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
            SFTRRRDAEAINLA RSLRKEARTWFN +E G DS SDDLFAKASAWY+VTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGCY 1080

Query: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDGR 1132
            N+GMKRDHYLSFPWC+Y KLMQ+KENNLRKRERA+RLAT DRF  VLNL GR
Sbjct: 1081 NEGMKRDHYLSFPWCIYDKLMQIKENNLRKRERAARLATFDRFGHVLNLGGR 1129

[Close]

BLAST of CmaCh04G000910 vs. NCBI nr
Match: gi|525507304|ref|NP_001267692.1| (RNA-dependent RNA polymerase 1-like [Cucumis sativus])

HSP 1 Score: 1909.0 bits (4944), Expect = 0.0e+00
Identity = 935/1131 (82.67%), Postives = 1016/1131 (89.83%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MGKT+HISGFPSH TAD+VK+FLE  TG GTVYAIKVRPPKRGG R+YAIVQFT A QAE
Sbjct: 1    MGKTIHISGFPSHVTADAVKNFLEGHTGPGTVYAIKVRPPKRGGGRLYAIVQFTSATQAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
            LIISLANQRLWYGSSYLKARA +VDIVPKPRTY++TLE L LCFGCQVS+EKF VLWEG+
Sbjct: 61   LIISLANQRLWYGSSYLKARATEVDIVPKPRTYMYTLEELLLCFGCQVSTEKFRVLWEGN 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
            V+LVTFG+ MRKMNFHL +  VEYR +LSYE IWQIQLH  + QSMK LLIQL GAPRIY
Sbjct: 121  VDLVTFGIGMRKMNFHLKYKSVEYRLELSYEIIWQIQLHCPRDQSMKYLLIQLSGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            KKVAP+SGQIFD+PL NFFKE  DDQ VRT DFT S SIGQSSSLCLKLPNGRQLP F++
Sbjct: 181  KKVAPNSGQIFDNPLLNFFKEASDDQWVRTTDFTSSCSIGQSSSLCLKLPNGRQLPPFKQ 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +FAYYEEFE EF+L+D    FS   DL P+VDS  +VL PY+I+FK+N LVQ GCIP P 
Sbjct: 241  NFAYYEEFEHEFRLIDEDANFSFCRDLAPIVDSRSHVL-PYKILFKINALVQYGCIPWPL 300

Query: 301  LDTGFYRLVDPS-RIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKYAKHPSNSPAIAL 360
            LD  FYRLV+     R+E+VE+ALEKLFHLKEC Y+PS+FLTEQY+KY++HP NSP I+L
Sbjct: 301  LDASFYRLVERIITTRIEFVEHALEKLFHLKECNYDPSNFLTEQYRKYSRHPPNSPVISL 360

Query: 361  DAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDLL 420
            D GLVYVRRVQITPCKV+FCGPEVNVSNRVLRHFS+ +DNFLRVSFVDEEWDKMRSTDLL
Sbjct: 361  DDGLVYVRRVQITPCKVFFCGPEVNVSNRVLRHFSQYIDNFLRVSFVDEEWDKMRSTDLL 420

Query: 421  PRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDAA 480
            PRM+S  E+GKTDIYRRILSVLKNGI IGDK F+FLAFSSSQLR+NSLWMFAS P +DAA
Sbjct: 421  PRMSSKSEDGKTDIYRRILSVLKNGIVIGDKTFQFLAFSSSQLRDNSLWMFASGPDIDAA 480

Query: 481  VIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSDG 540
             IR WMGDF+HIKNPAKYAARLGQSFGSSTE LSVA +EREIIPDIEVQ GE+KYVFSDG
Sbjct: 481  YIRAWMGDFRHIKNPAKYAARLGQSFGSSTEALSVASNEREIIPDIEVQQGEIKYVFSDG 540

Query: 541  IGKISSDFAKRVASKCVLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESDNT 600
            IGKISS FAK VA+KC     PSAFQIRYGGYKGVVAVDP S++KLSLRKSMCKFESDNT
Sbjct: 541  IGKISSKFAKEVAAKCGFQAVPSAFQIRYGGYKGVVAVDPYSTIKLSLRKSMCKFESDNT 600

Query: 601  KLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEALEL 660
            KLDVLG+SKYQPCFLNRQLITL+STLGV+DE+FEKKQSEA+EQLDAILTDPLKAQEALEL
Sbjct: 601  KLDVLGHSKYQPCFLNRQLITLMSTLGVRDEIFEKKQSEAVEQLDAILTDPLKAQEALEL 660

Query: 661  MSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGCLD 720
            MSPGENTNILKEMLKCGY+PDVEPYLSMMLQTFR SKLLELRTKSRIFIPNGRAMMGCLD
Sbjct: 661  MSPGENTNILKEMLKCGYQPDVEPYLSMMLQTFRASKLLELRTKSRIFIPNGRAMMGCLD 720

Query: 721  ETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRVLN 780
            ET TLEYGQVFVQIS+ RHR++S++ AF+  G E HLVI GNVTVAKNPCLHPGDVRVL 
Sbjct: 721  ETRTLEYGQVFVQISSGRHRNLSESFAFNRIGREHHLVIEGNVTVAKNPCLHPGDVRVLK 780

Query: 781  AVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYTPA 840
            AVN+P LYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIP RQIPPMDYTPA
Sbjct: 781  AVNIPGLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPSRQIPPMDYTPA 840

Query: 841  PPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFSIA 900
            PP +LDRDVT ED+QEYFVNYMVNDSLGIIANAHTAFADKE FKARS+PC+ELAKLFS+A
Sbjct: 841  PPNELDRDVTTEDIQEYFVNYMVNDSLGIIANAHTAFADKELFKARSSPCLELAKLFSVA 900

Query: 901  VDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRSFT 960
            VDFPKTGVPAIIPSHL VKEFPDFMEKPDR SYES  VIGKLFRAVK IAP +S+IRSFT
Sbjct: 901  VDFPKTGVPAIIPSHLYVKEFPDFMEKPDRPSYESNKVIGKLFRAVKDIAPTLSHIRSFT 960

Query: 961  RDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRMSK 1020
            RDVA RCYD DME EGFEDYVEDA YHK+ YDYKLGNLLDYYGIKSE+E+ SG+IMRMSK
Sbjct: 961  RDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSK 1020

Query: 1021 SFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWGSY 1080
            SFTRRRDAEAINLA RSLRKEARTWFN +E G DS SDDLFAKASAWY+VTYHHSYWG Y
Sbjct: 1021 SFTRRRDAEAINLAVRSLRKEARTWFNARE-GADSNSDDLFAKASAWYYVTYHHSYWGCY 1080

Query: 1081 NDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLDG 1131
            N+GMKRDHYLSFPWCVY KLMQ+KENNLR+RERA+RLA+ DRF  VLNL G
Sbjct: 1081 NEGMKRDHYLSFPWCVYDKLMQIKENNLRRRERAARLASFDRFGHVLNLGG 1129

[Close]

BLAST of CmaCh04G000910 vs. NCBI nr
Match: gi|1009154798|ref|XP_015895367.1| (PREDICTED: RNA-dependent RNA polymerase 1 [Ziziphus jujuba])

HSP 1 Score: 1628.2 bits (4215), Expect = 0.0e+00
Identity = 796/1132 (70.32%), Postives = 936/1132 (82.69%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            MG+T+ +SGFPS  +A+ VK FLE  TG GTVYAIK+R  K GG R YAIVQFT    AE
Sbjct: 1    MGRTIQVSGFPSSVSAELVKKFLENLTGEGTVYAIKLRKFKNGG-RYYAIVQFTSTRDAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
             IISLA  RLWYG+SYL AR+ D DIV KPRTY+H+LEN+TL FGCQ+S EKF VLW+ +
Sbjct: 61   FIISLAGARLWYGTSYLTARSMDTDIVAKPRTYLHSLENITLHFGCQISKEKFSVLWKRE 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
               V FG+ +R+++FH ++ +VEY+ QLSYENIWQI+LHR   Q++K LLIQLYGAPRIY
Sbjct: 121  NVSVDFGIGLRRLHFHFMYQYVEYKLQLSYENIWQIELHRPLGQTVKYLLIQLYGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            +K  PSSG +++DP+FNFFK+ PDDQ VR  DFTPS  IGQSS+LCL+LP+G +LPNF+ 
Sbjct: 181  EKDVPSSGDVYEDPIFNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFKE 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +FAYY+E E  F L + G  FSC+  LVP+V    +V LPY+IIFK+N L+Q GC+ GPS
Sbjct: 241  NFAYYKESEGRFSL-ETGFPFSCNLYLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPS 300

Query: 301  LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKY--AKHPSNSPAIA 360
            LD  FYRLVDP RI V  +E+AL+KL++LKECCYEPS++L EQY+KY  +K P  SP I+
Sbjct: 301  LDAAFYRLVDPRRINVACIEHALDKLYNLKECCYEPSTWLNEQYRKYFKSKRPPKSPMIS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDL 420
            LDAGLVYVRRVQITPCKVYF GPE+NVSNRVLRH+   +DNFLRVSFVDEE DKM STDL
Sbjct: 361  LDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRVSFVDEELDKMYSTDL 420

Query: 421  LPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDA 480
             PR +++    KT +Y+R+LSVL++GI IG+KKF+FLAFSSSQLR+NS WMFA   G+ A
Sbjct: 421  SPRNSAT----KTGLYKRVLSVLRDGIIIGNKKFEFLAFSSSQLRDNSTWMFAPSDGITA 480

Query: 481  AVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSD 540
            A IREWMGDF+ I+N AKYAARLGQSFGSSTETLSV+RHE E IPDIEV +G VKY FSD
Sbjct: 481  ADIREWMGDFRQIRNVAKYAARLGQSFGSSTETLSVSRHEVEKIPDIEVVYGGVKYAFSD 540

Query: 541  GIGKISSDFAKRVASKCVL-AFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESD 600
            GIGKISS+FA++VASKC     TPSAFQIRYGGYKGVVAVDP SS KLSLRKSMCK+ESD
Sbjct: 541  GIGKISSEFARKVASKCGCNGVTPSAFQIRYGGYKGVVAVDPTSSFKLSLRKSMCKYESD 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEAL 660
            N KLDVL YSK+QPCFLNRQLI+LLSTLGV+D+VF KKQS+A++QLDAILTDPL+AQEAL
Sbjct: 601  NIKLDVLAYSKFQPCFLNRQLISLLSTLGVEDQVFLKKQSKAVQQLDAILTDPLRAQEAL 660

Query: 661  ELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGC 720
            +LMSPGENTN+LKE+L CGYKPD EPYLSMMLQTFR SKLLELRTKSRIFIP+GRAMMGC
Sbjct: 661  DLMSPGENTNVLKELLMCGYKPDTEPYLSMMLQTFRASKLLELRTKSRIFIPDGRAMMGC 720

Query: 721  LDETGTLEYGQVFVQISNARHRHISDTSAFDMSGSEDHLVIVGNVTVAKNPCLHPGDVRV 780
            LDET TLEYGQVFVQ S +R+R   D+     +G++   ++ G+V VAKNPCLHPGDVRV
Sbjct: 721  LDETRTLEYGQVFVQFSGSRYRQFGDSPMLGGNGTKQRFIVTGSVVVAKNPCLHPGDVRV 780

Query: 781  LNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDYT 840
            L AVNV  L+HMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWD ELIP  QI PMDYT
Sbjct: 781  LRAVNVSELHHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDPELIPCHQIEPMDYT 840

Query: 841  PAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLFS 900
            PAP +  D DVTIE+VQEYF NY+VNDSLGIIANAHT FADKE  KA S+PC+ELA+LFS
Sbjct: 841  PAPSMLKDDDVTIEEVQEYFANYIVNDSLGIIANAHTVFADKEYGKAMSSPCVELARLFS 900

Query: 901  IAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIRS 960
            IAVDFPKTG+PA+IP HL+VKE+PDFMEKPD+ +YES+NVIGKLFR VK IAPN S IRS
Sbjct: 901  IAVDFPKTGIPAVIPPHLHVKEYPDFMEKPDKQTYESQNVIGKLFREVKDIAPNTSSIRS 960

Query: 961  FTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMRM 1020
            FT +VA + YD DME +GFEDY++DA Y+K  YDYKLGNLLDYYGIK+E+EI SG+I+RM
Sbjct: 961  FTSEVARKSYDPDMEVDGFEDYLDDAYYYKNSYDYKLGNLLDYYGIKTEAEILSGSILRM 1020

Query: 1021 SKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYWG 1080
            SKSFT+RRDAE+IN+A R+LRKEAR WFN K SG D  SDDL+AKASAWYHVTYH SYWG
Sbjct: 1021 SKSFTKRRDAESINMAVRALRKEARNWFNEKRSGGDFESDDLYAKASAWYHVTYHPSYWG 1080

Query: 1081 SYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDRFSRVLNLD 1130
            SYN+GM RDHYLSF WCVY +L+++KE+   +R      +  + F   L L+
Sbjct: 1081 SYNEGMNRDHYLSFAWCVYDRLVEIKEDKASRRRHLQLSSLEEHFCYGLRLN 1126

[Close]

BLAST of CmaCh04G000910 vs. NCBI nr
Match: gi|224099571|ref|XP_002311536.1| (RNA-directed RNA Polymerase family protein [Populus trichocarpa])

HSP 1 Score: 1580.1 bits (4090), Expect = 0.0e+00
Identity = 777/1133 (68.58%), Postives = 919/1133 (81.11%), Query Frame = 1


Query: 1    MGKTVHISGFPSHATADSVKSFLELRTGLGTVYAIKVRPPKRGGSRVYAIVQFTGAAQAE 60
            M KTV +SGFPS  TA +V+ FLE  TG GTV A+K+R  + GG+R YAIVQFT    AE
Sbjct: 1    MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAE 60

Query: 61   LIISLANQRLWYGSSYLKARAADVDIVPKPRTYVHTLENLTLCFGCQVSSEKFHVLWEGD 120
             IISLAN RLWYG SYL AR  D DI+P+PR+++HT+E++TL FG Q S EKF  +W G+
Sbjct: 61   QIISLANPRLWYGHSYLNARPMDRDIIPQPRSFLHTMESVTLHFGYQTSKEKFSAVWSGN 120

Query: 121  VELVTFGVEMRKMNFHLIHNFVEYRFQLSYENIWQIQLHRLQHQSMKCLLIQLYGAPRIY 180
               V FG+ MRK++F L HN  EY+  L +ENIWQI+LHR + Q++K LLIQLYGAPRIY
Sbjct: 121  NVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPRIY 180

Query: 181  KKVAPSSGQIFDDPLFNFFKEVPDDQCVRTADFTPSYSIGQSSSLCLKLPNGRQLPNFRR 240
            ++  PSS  +F+DPL N+F++VPD+Q VRT DFTPS  IG SSSLCL+LPN  QLPNF  
Sbjct: 181  ERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNFNE 240

Query: 241  HFAYYEEFEDEFKLVDGGNGFSCSDDLVPVVDSHPNVLLPYEIIFKVNVLVQNGCIPGPS 300
            +F YY+E E  F L + G  FS + DLVP+V     V LPY I+F+VN+LVQNGC+ G  
Sbjct: 241  NFFYYKENEGTFVL-ESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGSM 300

Query: 301  LDTGFYRLVDPSRIRVEYVENALEKLFHLKECCYEPSSFLTEQYKKY--AKHPSNSPAIA 360
            LD  FYRLVDP+R+ V  +E ALEKL+HLKECCYEPS +  EQYKKY  + +P  SP ++
Sbjct: 301  LDDIFYRLVDPNRMPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPVLS 360

Query: 361  LDAGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHFSRDLDNFLRVSFVDEEWDKMRSTDL 420
            LDAGLVYV +VQITPCKV+FCGPEVNVSNRVLR +  D+DNFLRVSFVDEE +K+ STD+
Sbjct: 361  LDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHSTDV 420

Query: 421  LPRMASSIENGKTDIYRRILSVLKNGIAIGDKKFKFLAFSSSQLRENSLWMFASRPGLDA 480
             PR +S  E  +T IY RILS L+NGI IGDKKF+FLAFSSSQLRENS WMFASR GL A
Sbjct: 421  SPRTSSRNELRRTAIYNRILSTLQNGIVIGDKKFEFLAFSSSQLRENSCWMFASRLGLTA 480

Query: 481  AVIREWMGDFQHIKNPAKYAARLGQSFGSSTETLSVARHEREIIPDIEVQHGEVKYVFSD 540
            A IR WMG F  I+N A+YAARLGQSFGSSTETLSV+ HE EIIPDIEV  G  +Y+FSD
Sbjct: 481  ADIRAWMGSFHKIRNVARYAARLGQSFGSSTETLSVSSHEIEIIPDIEVSRGGTRYLFSD 540

Query: 541  GIGKISSDFAKRVASKC-VLAFTPSAFQIRYGGYKGVVAVDPRSSVKLSLRKSMCKFESD 600
            GIGKIS++FA++VA KC    FTPSAFQIRY GYKGVVAVDP SS KLSLR+SM K+ES+
Sbjct: 541  GIGKISAEFARKVAIKCGCKGFTPSAFQIRYAGYKGVVAVDPTSSKKLSLRRSMFKYESE 600

Query: 601  NTKLDVLGYSKYQPCFLNRQLITLLSTLGVKDEVFEKKQSEALEQLDAILTDPLKAQEAL 660
            NTKLDVL +SKYQPCFLNRQLITLLSTLGV D  FE+KQ EA++QLDA+LTDPL+AQEAL
Sbjct: 601  NTKLDVLAHSKYQPCFLNRQLITLLSTLGVPDHHFERKQREAVDQLDAMLTDPLRAQEAL 660

Query: 661  ELMSPGENTNILKEMLKCGYKPDVEPYLSMMLQTFRESKLLELRTKSRIFIPNGRAMMGC 720
            ELMSPGENTNILKEML CGY+PD EP+LSMMLQTFR SKLLELRTK+RIFIPNGR+MMGC
Sbjct: 661  ELMSPGENTNILKEMLLCGYQPDAEPFLSMMLQTFRASKLLELRTKTRIFIPNGRSMMGC 720

Query: 721  LDETGTLEYGQVFVQISNARHRHISDTS-AFDMSGSEDHLVIVGNVTVAKNPCLHPGDVR 780
            LDET TLE+GQVFV+ S +R R++ D+S  F   G     +I G+V VAKNPCLHPGD+R
Sbjct: 721  LDETRTLEHGQVFVKFSGSRFRNLYDSSDMFSERGRGQCYLIKGSVVVAKNPCLHPGDLR 780

Query: 781  VLNAVNVPLLYHMVDCVVFPQKGSRPHPNECSGSDLDGDIYFVCWDTELIPPRQIPPMDY 840
            +L AV+VP L+HMVDCVVFPQKG RPHPNECSGSDLDGDIYFVCWD ELIP +QI PMDY
Sbjct: 781  ILKAVDVPALHHMVDCVVFPQKGPRPHPNECSGSDLDGDIYFVCWDPELIPSQQISPMDY 840

Query: 841  TPAPPIQLDRDVTIEDVQEYFVNYMVNDSLGIIANAHTAFADKEPFKARSAPCIELAKLF 900
            TP PP+QLD DVTIE+V+EYF NY+VNDSLG+IANAHTA ADKE  KA S PC+ELA+ F
Sbjct: 841  TPEPPLQLDHDVTIEEVEEYFTNYIVNDSLGVIANAHTAHADKESLKAMSEPCVELARKF 900

Query: 901  SIAVDFPKTGVPAIIPSHLNVKEFPDFMEKPDRHSYESKNVIGKLFRAVKGIAPNISYIR 960
            SIAVDFPKTGVPA IPS+L  +E+PDFMEKPD+ SYES+NVIGKLFR VK IAP  S IR
Sbjct: 901  SIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRTSSIR 960

Query: 961  SFTRDVAMRCYDSDMEAEGFEDYVEDAIYHKTIYDYKLGNLLDYYGIKSESEIFSGNIMR 1020
            SFT DVA +CYD DME +GFEDY++DA Y+K+ YDYKLGNL++YYGIK+E+E+ SG+ M+
Sbjct: 961  SFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSGSFMK 1020

Query: 1021 MSKSFTRRRDAEAINLAARSLRKEARTWFNTKESGLDSGSDDLFAKASAWYHVTYHHSYW 1080
            MSKSFT++RDAEAI +A RSL+KEAR+WFN K SGLDS +DD+ AKASAWYHVTYHH+YW
Sbjct: 1021 MSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYHHNYW 1080

Query: 1081 GSYNDGMKRDHYLSFPWCVYHKLMQVKENNLRKRERASRLATLDR-FSRVLNL 1129
            G YN+GM RDH+LSFPWCVY KL+Q+K  N  +  R+  L +++R FSR L+L
Sbjct: 1081 GCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRRSLILPSVERQFSRGLHL 1132

The following BLAST results are available for this feature:

BLAST of CmaCh04G000910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RDR1_ARATH	0.0e+00	62.62	RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana GN=RDR1 PE=2 SV=1	[more]
RDR1_ORYSJ	1.1e-278	64.44	Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica GN=RDR1 ...	[more]
RDR2_ARATH	4.4e-219	39.51	RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana GN=RDR2 PE=1 SV=1	[more]
RDR2_ORYSJ	3.1e-217	38.57	Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica GN=RDR2 ...	[more]
SHL2_ORYSJ	2.9e-162	37.70	Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica GN=SH...	[more]

BLAST of CmaCh04G000910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S1YD00_CUCME	0.0e+00	83.20	RNA-dependent RNA polymerase 1a OS=Cucumis melo GN=RDR1a PE=2 SV=1	[more]
E9NWK6_CUCSA	0.0e+00	82.67	RNA-dependent RNA polymerase 1a OS=Cucumis sativus GN=RDR1a PE=2 SV=1	[more]
B9HJH7_POPTR	0.0e+00	68.58	RNA-directed RNA Polymerase family protein OS=Populus trichocarpa GN=POPTR_0008s...	[more]
A0A061EGF4_THECC	0.0e+00	68.46	RNA-dependent RNA polymerase 1 isoform 1 OS=Theobroma cacao GN=TCM_011292 PE=4 S...	[more]
W9RFK1_9ROSA	0.0e+00	67.28	RNA-dependent RNA polymerase 1 OS=Morus notabilis GN=L484_006779 PE=4 SV=1	[more]

BLAST of CmaCh04G000910 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14790.1	0.0e+00	62.62	RNA-dependent RNA polymerase 1	[more]
AT4G11130.1	2.5e-220	39.51	RNA-dependent RNA polymerase 2	[more]
AT3G49500.1	3.6e-163	37.50	RNA-dependent RNA polymerase 6	[more]
AT2G19930.1	1.9e-26	25.00	RNA-dependent RNA polymerase family protein	[more]
AT2G19910.1	1.0e-24	25.78	RNA-dependent RNA polymerase family protein	[more]

BLAST of CmaCh04G000910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|948561981\|gb\|ALM88236.1\|	0.0e+00	83.20	RNA-dependent RNA polymerase 1a [Cucumis melo]	[more]
gi\|659130594\|ref\|XP_008465250.1\|	0.0e+00	83.13	PREDICTED: RNA-dependent RNA polymerase 1 [Cucumis melo]	[more]
gi\|525507304\|ref\|NP_001267692.1\|	0.0e+00	82.67	RNA-dependent RNA polymerase 1-like [Cucumis sativus]	[more]
gi\|1009154798\|ref\|XP_015895367.1\|	0.0e+00	70.32	PREDICTED: RNA-dependent RNA polymerase 1 [Ziziphus jujuba]	[more]
gi\|224099571\|ref\|XP_002311536.1\|	0.0e+00	68.58	RNA-directed RNA Polymerase family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR007855	RNA-dep_RNA_pol_euk-typ
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003968	RNA-directed RNA polymerase activity
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0010025	wax biosynthetic process
biological_process	GO:0001172	transcription, RNA-templated
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0009615	response to virus
biological_process	GO:0009617	response to bacterium
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0060148	positive regulation of posttranscriptional gene silencing
biological_process	GO:0031348	negative regulation of defense response
cellular_component	GO:0031379	RNA-directed RNA polymerase complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003968	RNA-directed RNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G000910.1	CmaCh04G000910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 4..80 score: 1.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 3..84 score:
IPR007855	RNA-dependent RNA polymerase, eukaryotic-type	PANTHER	PTHR23079	RNA-DEPENDENT RNA POLYMERASE	coord: 17..1121 score:
IPR007855	RNA-dependent RNA polymerase, eukaryotic-type	PFAM	PF05183	RdRP	coord: 371..945 score: 4.8E
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 3..74 score: 8.
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 2..86 score: 2.1
None	No IPR available	PANTHER	PTHR23079:SF9	RNA-DEPENDENT RNA POLYMERASE 1	coord: 17..1121 score:

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G000910	Wax gourd	cmawgoB0890
CmaCh04G000910	Cucurbita maxima (Rimu)	cmacmaB531
CmaCh04G000910	Cucumber (Gy14) v1	cgycmaB0401
CmaCh04G000910	Cucumber (Gy14) v1	cgycmaB0493
CmaCh04G000910	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G000910	Cucurbita moschata (Rifu)	cmacmoB730
CmaCh04G000910	Wild cucumber (PI 183967)	cmacpiB740
CmaCh04G000910	Wild cucumber (PI 183967)	cmacpiB757
CmaCh04G000910	Cucumber (Chinese Long) v2	cmacuB747
CmaCh04G000910	Watermelon (Charleston Gray)	cmawcgB674
CmaCh04G000910	Watermelon (97103) v1	cmawmB684
CmaCh04G000910	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G000910	Cucurbita pepo (Zucchini)	cmacpeB722
CmaCh04G000910	Bottle gourd (USVL1VR-Ls)	cmalsiB671
CmaCh04G000910	Cucumber (Gy14) v2	cgybcmaB660
CmaCh04G000910	Cucumber (Gy14) v2	cgybcmaB674
CmaCh04G000910	Melon (DHL92) v3.6.1	cmamedB743
CmaCh04G000910	Silver-seed gourd	carcmaB0949
CmaCh04G000910	Cucumber (Chinese Long) v3	cmacucB0883
CmaCh04G000910	Cucumber (Chinese Long) v3	cmacucB0873
CmaCh04G000910	Cucumber (Chinese Long) v3	cmacucB0894
CmaCh04G000910	Watermelon (97103) v2	cmawmbB781