CmaCh04G000590 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh04G000590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	NHL domain-containing protein
Location	Cma_Chr04 : 285094 .. 287952 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATGTGTCGTCCGAAATTCACAGCGTGGAAGGCAGAATGGGAAGTGATTTTTATATGTGGGAGGGAGGCTTGGGATGGAAAAGTCCAGAAGATTCTAAAGAGAAAAATATCTGTGAACGAGAAGGAGAGAAAGTGTTCCAGAAATTTCTAATGGAGAAGGAGAACAATGACGTGGCCGTTTGCTTTCCCAGTTTTAGATATTTTGGGGTGACATGTCGCTCCATGGTAGATTATTAATTTTTTATTACCAAATAAAAAGCTTCGTGGGGACCACTCGACAATAATAAATTATTCAGTAAGTCCTGTGGTTGGTCGCATTTATATCGAGTATTATTGTGCAGCTGACGTTGAACAATCGATGCCAAGCCTAATCTTTAAAAAATCAATTGTGAAATAAAATTATTTTAATTCAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAGAAACTGCTAGCTTGTTGAAGCGACACAACACAAACCCTCCCAATAAAATTAAATTCTCTCAATGACTCCCATGGCGCCGATTAAACCCTCTGCAATTTTCTTTTTCTTCTTCTTCTTTCAATTGTTTCTCTCGCTAACCCTAGCTCGAAAGCCGAAAGCCCTATCAAATCGATTTCCGATCCCCAAATCTCTATCAGGAGGACCTCGTATGGGACTCATCAGCGCAACATTTCATCGTCGGCTCACTCCACCACCGCACTCTCGTCTCCGTCTCCGACGCTGGCGTCGCTGAAAACTTAATCAACGATCCGACCTCCCCGAAAACGTCTCGATCTTAGGCCTCGCCATCGATTCCATCAACAACCGCCTCCTCGCCGCAGTCCACGCCGTCGCTCCCCTCCCGGAGTTCAACGCCCTCGCCGCCTACGACCTCCGATCCCTCCGCCGCATCTCCCTTACACTTCTCCCTCCTCCAACTCCAATCGTTGCCCCGTCGCGAACGGCATTGCAGTTGTCTTCAAGGGAAACGCCTTCGTCACAAACTCCGCCGAAAACTTCATCTGGAAGGTCGAAAAACACGGATCAGCCTCGATCTTCTCAAAATCAGCGAGTTGCAGTTTCCATCCAATAACCGCTAATGAAGTCTACTCCTCGTCGGGGTTAAACGGCGCCGTTTACGTCAGCAAAGGATACCTTCTGGTGGTGCAATCGAACACCGGAAAGATGTACAGAGTCGACGCTGACGACGGGACGGCGAGGCTGGTACTATTGAACGAAGATCTGAAGGGGGCGGACGGGATAGCGATGAGGAGAGACGGCGTGGTTTTGGTGGTGAGTTACAGAAAGCTGTGGTTCCTGAAGAGTCGGGACTGAGAGTTGGGGGGAGGGGGTGGGTTATGACGGAATTGACCTCGATGAAGAGAAGTTTGCTACTGCGGTGGCTGTGGGAGGTGAGGGGAGAGTGTATGTGTTGAATGGGTATGTGAATGAGGGGCTAAATGGTAATTTGGGATTGAGGAAATGAGGTCTTCAAAAGAGAGTGAAGAAGAGAGGGTTTGGATATATGTGTTGGTTGGGTTCGGTTTGGTTTATTTCTTGTTTTGGAGATTTCGGATGAAACAGCTCATTGGGAATATGGATAAGAAGACTTCTTCACCATTCCCTTTCTTCTTAGCTTTTCATTTATCTAATCATCAATAACACACTTCATTTTTTGAAGCTCCAGGTTGAGTAGGTCCTGGATTCTGAATTGTCCCGGATTCCCGAATTCAGAATATGCCCTCCGAATTCATTCTCGACTGATCCGCCATGGTAATCTAATAGATACTTTAACATAACATACATCTATGAAGTCTTTCAAAACAGATAAAGAAATTTAGTCACGATGTAGTGTTTTTGTTTATTCCTGCCCAACCTTAACATACATGTCTTCTAAATTACAATGCAGCATAATAGCAATGGTGATAAATAATTATGGCAATTACAGAACCTGGACAATGCATTCAGATCATTCCTACTACCTGTGAAGTGAGTACAACACCGACCCATCCCAAAGCCAGCAACACCTTTATTGTCCCTTCTCCACATCAAATTCATGCTTCTCCCGGCCCCAACTTTCTGCTTCCCATCAACTCAGGATTTCTGCACATTGAGTTCTCTCTTTTGCTACATCATTTTTTCGTCTTGTTTTCAGTTTCTGAAACAGCTTTCGAGAGACACTCTTGGTTGACTGATGGACACGAAGAATTATCACTTGCTTCAACATGCACAGCTGAACGGCAGCTCATGTTCTTTGAAGTGTTTGGTGCTTCACTTGTGGAGACTTGA

mRNA sequence

ATGGAGAAATGTGTCGTCCGAAATTCACAGCGTGGAAGGCAGAATGGGAAGCCTCGCCATCGATTCCATCAACAACCGCCTCCTCGCCGCAGTCCACGCCGTCGCTCCCCTCCCGGAGTTCAACGCCCTCGCCGCCTACGACCTCCGATCCCTCCGCCGCATCTCCCTTACACTTCTCCCTCCTCCAACTCCAATCGTTGCCCCGTCGCGAACGGCATTGCAGTTGTCTTCAAGGGAAACGCCTTCGTCACAAACTCCGCCGAAAACTTCATCTGGAAGGTCGAAAAACACGGATCAGCCTCGATCTTCTCAAAATCAGCGAGTTGCAGTTTCCATCCAATAACCGCTAATGAAGTCTACTCCTCGTCGGGGTTAAACGGCGCCGTTTACGTCAGCAAAGGATACCTTCTGGTGGTGCAATCGAACACCGGAAAGATGTACAGAGTCGACGCTGACGACGGGACGGCGAGGCTGGTACTATTGAACGAAGATCTGAAGGGGGCGGACGGGATAGCGATGAGGAGAGACGGCGTGGTTTTGGTGGTGAGTTACAGAAAGCTGTGCTCCAGGTTGAGTAGGTCCTGGATTCTGAATTGTCCCGGATTCCCGAATTCAGAATATGCCCTCCGAATTCATTCTCGACTGATCCGCCATGAACCTGGACAATGCATTCAGATCATTCCTACTACCTGTGAAGTGAGTACAACACCGACCCATCCCAAAGCCAGCAACACCTTTATTGTCCCTTCTCCACATCAAATTCATGCTTCTCCCGGCCCCAACTTTCTGCTTCCCATCAACTCAGGATTTCTGCACATTGAGTTCTCTCTTTTGCTACATCATTTTTTCGTCTTGTTTTCAGTTTCTGAAACAGCTTTCGAGAGACACTCTTGGTTGACTGATGGACACGAAGAATTATCACTTGCTTCAACATGCACAGCTGAACGGCAGCTCATGTTCTTTGAAGTGTTTGGTGCTTCACTTGTGGAGACTTGA

Coding sequence (CDS)

ATGGAGAAATGTGTCGTCCGAAATTCACAGCGTGGAAGGCAGAATGGGAAGCCTCGCCATCGATTCCATCAACAACCGCCTCCTCGCCGCAGTCCACGCCGTCGCTCCCCTCCCGGAGTTCAACGCCCTCGCCGCCTACGACCTCCGATCCCTCCGCCGCATCTCCCTTACACTTCTCCCTCCTCCAACTCCAATCGTTGCCCCGTCGCGAACGGCATTGCAGTTGTCTTCAAGGGAAACGCCTTCGTCACAAACTCCGCCGAAAACTTCATCTGGAAGGTCGAAAAACACGGATCAGCCTCGATCTTCTCAAAATCAGCGAGTTGCAGTTTCCATCCAATAACCGCTAATGAAGTCTACTCCTCGTCGGGGTTAAACGGCGCCGTTTACGTCAGCAAAGGATACCTTCTGGTGGTGCAATCGAACACCGGAAAGATGTACAGAGTCGACGCTGACGACGGGACGGCGAGGCTGGTACTATTGAACGAAGATCTGAAGGGGGCGGACGGGATAGCGATGAGGAGAGACGGCGTGGTTTTGGTGGTGAGTTACAGAAAGCTGTGCTCCAGGTTGAGTAGGTCCTGGATTCTGAATTGTCCCGGATTCCCGAATTCAGAATATGCCCTCCGAATTCATTCTCGACTGATCCGCCATGAACCTGGACAATGCATTCAGATCATTCCTACTACCTGTGAAGTGAGTACAACACCGACCCATCCCAAAGCCAGCAACACCTTTATTGTCCCTTCTCCACATCAAATTCATGCTTCTCCCGGCCCCAACTTTCTGCTTCCCATCAACTCAGGATTTCTGCACATTGAGTTCTCTCTTTTGCTACATCATTTTTTCGTCTTGTTTTCAGTTTCTGAAACAGCTTTCGAGAGACACTCTTGGTTGACTGATGGACACGAAGAATTATCACTTGCTTCAACATGCACAGCTGAACGGCAGCTCATGTTCTTTGAAGTGTTTGGTGCTTCACTTGTGGAGACTTGA

Protein sequence

MEKCVVRNSQRGRQNGKPRHRFHQQPPPRRSPRRRSPPGVQRPRRLRPPIPPPHLPYTSPSSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITANEVYSSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRRDGVVLVVSYRKLCSRLSRSWILNCPGFPNSEYALRIHSRLIRHEPGQCIQIIPTTCEVSTTPTHPKASNTFIVPSPHQIHASPGPNFLLPINSGFLHIEFSLLLHHFFVLFSVSETAFERHSWLTDGHEELSLASTCTAERQLMFFEVFGASLVET

Homology

[Close]

BLAST of CmaCh04G000590 vs. TrEMBL
Match: V7ATY6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G073100g PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37
Identity = 90/164 (54.88%), Postives = 111/164 (67.68%), Query Frame = 1


Query: 69  VANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITANEVYSSSGLNGA 128
           +AN +A  FKGNA+VTNS  N+IWKV + G ASI S SA  + HP+   E +SS GLNG 
Sbjct: 149 IANDVAADFKGNAYVTNSVGNYIWKVNEKGEASILSNSARFTEHPVIIEEKFSSCGLNGV 208

Query: 129 VYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRRDGVVLVVSYRKL- 188
           VY SKGYLLVVQ+NTGKM++VDADDG ARLVLLNEDL GADG+A+R DGVVLVVS R++ 
Sbjct: 209 VYNSKGYLLVVQTNTGKMFKVDADDGVARLVLLNEDLVGADGVALRNDGVVLVVSLRRVW 268

Query: 189 CSRLSRSWI---------LNCPGFPNS------EYALRIHSRLI 217
             + +  W          L+  GFP S      E A  +H R++
Sbjct: 269 LLKSNDGWSQGVVFDKIDLDDEGFPTSIVVRERERAYVLHGRMM 312

[Close]

BLAST of CmaCh04G000590 vs. TrEMBL
Match: A0A151UBT5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_021027 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36
Identity = 81/127 (63.78%), Postives = 99/127 (77.95%), Query Frame = 1


Query: 61  SSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITANEVY 120
           ++   R P+AN +A  F GNA+VTN+A N+IWKV  +G A IFSKSA  + H +  + VY
Sbjct: 133 AAGDERRPIANDVAADFGGNAYVTNAAGNYIWKVNNNGEAWIFSKSARFTEHAVVGDTVY 192

Query: 121 SSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRRDGVVL 180
           S  GLNG V+VSKGYLLVVQSNTGKM++VDA+DG+AR VLLNEDL GAD +A+R DGVVL
Sbjct: 193 SVCGLNGIVHVSKGYLLVVQSNTGKMFKVDAEDGSAREVLLNEDLMGADDVALRGDGVVL 252

Query: 181 VVSYRKL 188
           VVSY KL
Sbjct: 253 VVSYNKL 259

[Close]

BLAST of CmaCh04G000590 vs. TrEMBL
Match: B9MTT6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s11230g PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 1.0e-34
Identity = 81/130 (62.31%), Postives = 96/130 (73.85%), Query Frame = 1


Query: 58  TSPSSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITAN 117
           ++PS    R P+AN +A  FKGNA+VTNS  NFIWKV   G ASIFS S   +  P+  +
Sbjct: 128 STPSDEDGRSPMANAVAFDFKGNAYVTNSEGNFIWKVSPEGEASIFSTSPVFTQFPVDRD 187

Query: 118 EVYSSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRRDG 177
              SS GLNG  YVSKGYLLVVQ+NTGK+++VDADDGTAR VLL+EDL   DGIA+R DG
Sbjct: 188 SPLSSFGLNGIAYVSKGYLLVVQTNTGKLFKVDADDGTARNVLLSEDLPEGDGIAIRGDG 247

Query: 178 VVLVVSYRKL 188
           VVLVVS +KL
Sbjct: 248 VVLVVSNKKL 257

[Close]

BLAST of CmaCh04G000590 vs. TrEMBL
Match: A0A0L9UHP1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g240900 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 1


Query: 55  LPYTSPSSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPI 114
           LPY           VAN +AV FKGNA+VTNS  N+IWKV + G A I S SA  + HP+
Sbjct: 134 LPYAEEGDEKRA--VANDVAVDFKGNAYVTNSGGNYIWKVSEKGEAWILSNSARFTEHPM 193

Query: 115 TANEVYSSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMR 174
              E +SS G+NG VY  KGYLLVVQSNTGKM++VDADDG A+LVLLNEDL GADG+ +R
Sbjct: 194 IIGEKFSSCGINGLVYNGKGYLLVVQSNTGKMFKVDADDGVAKLVLLNEDLVGADGVVLR 253

Query: 175 RDGVVLVVSYRKL 188
            DGVVLVVS +++
Sbjct: 254 NDGVVLVVSSKRV 264

[Close]

BLAST of CmaCh04G000590 vs. TrEMBL
Match: A0A0S3RBC9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G054400 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 1


Query: 55  LPYTSPSSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPI 114
           LPY           VAN +AV FKGNA+VTNS  N+IWKV + G A I S SA  + HP+
Sbjct: 134 LPYAEEGDEKRA--VANDVAVDFKGNAYVTNSGGNYIWKVSEKGEAWILSNSARFTEHPM 193

Query: 115 TANEVYSSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMR 174
              E +SS G+NG VY  KGYLLVVQSNTGKM++VDADDG A+LVLLNEDL GADG+ +R
Sbjct: 194 IIGEKFSSCGINGLVYNGKGYLLVVQSNTGKMFKVDADDGVAKLVLLNEDLVGADGVVLR 253

Query: 175 RDGVVLVVSYRKL 188
            DGVVLVVS +++
Sbjct: 254 NDGVVLVVSSKRV 264

[Close]

BLAST of CmaCh04G000590 vs. TAIR10
Match: AT2G01410.1 (AT2G01410.1 NHL domain-containing protein)

HSP 1 Score: 145.6 bits (366), Expect = 5.5e-35
Identity = 84/150 (56.00%), Postives = 104/150 (69.33%), Query Frame = 1


Query: 69  VANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITANE--VYSSSGLN 128
           VAN +AV FKGNA+VTNSA+NFIWKV++ G+ASIFSKS   +  P+ A+    +   GLN
Sbjct: 156 VANDVAVDFKGNAYVTNSAKNFIWKVDRDGAASIFSKSPLFNSQPVAADADASFRDCGLN 215

Query: 129 GAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIA-MRRDGVVLVVSYR 188
           G VY+SKGYLLVVQSNTGK+++VD D G ARLVLLN DL  ADG+   RRDG V+VVS +
Sbjct: 216 GIVYISKGYLLVVQSNTGKVFKVDEDSGNARLVLLNGDLIAADGMTRRRRDGTVMVVSQK 275

Query: 189 KLCSRLSR-SWI---------LNCPGFPNS 206
           KL    S+ SW          L+  GFP +
Sbjct: 276 KLWLLKSQDSWSEGVVYDEIDLDIEGFPTA 305

[Close]

BLAST of CmaCh04G000590 vs. NCBI nr
Match: gi|659109577|ref|XP_008454779.1| (PREDICTED: uncharacterized protein LOC103495097 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 4.8e-49
Identity = 107/132 (81.06%), Postives = 118/132 (89.39%), Query Frame = 1


Query: 56  PYTSPSSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPIT 115
           P  S  ++S+R PVAN +AV FKGNAF+TNSA NFIWKV+K GSASIFSKSAS S +P T
Sbjct: 128 PLFSDGTSSHR-PVANAVAVDFKGNAFITNSAGNFIWKVDKDGSASIFSKSASYSSYPAT 187

Query: 116 ANEVYSSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRR 175
            NEVYSSSGLNGAVYVSKGYLLVVQSNTGKMY+VDADDGTARLVLLN++LKGADGIA R+
Sbjct: 188 PNEVYSSSGLNGAVYVSKGYLLVVQSNTGKMYKVDADDGTARLVLLNKELKGADGIAARK 247

Query: 176 DGVVLVVSYRKL 188
           DGVVLVVSYRKL
Sbjct: 248 DGVVLVVSYRKL 258

[Close]

BLAST of CmaCh04G000590 vs. NCBI nr
Match: gi|449445350|ref|XP_004140436.1| (PREDICTED: uncharacterized protein LOC101209037 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 9.1e-48
Identity = 104/132 (78.79%), Postives = 116/132 (87.88%), Query Frame = 1


Query: 56  PYTSPSSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPIT 115
           P  S  ++ +R PVAN +AV FKGNAF+TNS  NFIWKV+K GSASIFSKSAS S +P T
Sbjct: 127 PLPSDGTSGHR-PVANAVAVDFKGNAFITNSGGNFIWKVDKDGSASIFSKSASYSSYPAT 186

Query: 116 ANEVYSSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRR 175
            NEVYSSSGLNGAVYVSKGYLLVVQSNTGKM++VDADDGTARLVLLN++LKGADGIA R+
Sbjct: 187 PNEVYSSSGLNGAVYVSKGYLLVVQSNTGKMFKVDADDGTARLVLLNKELKGADGIAARK 246

Query: 176 DGVVLVVSYRKL 188
           DGVVLVVSYRKL
Sbjct: 247 DGVVLVVSYRKL 257

[Close]

BLAST of CmaCh04G000590 vs. NCBI nr
Match: gi|593269198|ref|XP_007136776.1| (hypothetical protein PHAVU_009G073100g [Phaseolus vulgaris])

HSP 1 Score: 163.3 bits (412), Expect = 7.2e-37
Identity = 90/164 (54.88%), Postives = 111/164 (67.68%), Query Frame = 1


Query: 69  VANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITANEVYSSSGLNGA 128
           +AN +A  FKGNA+VTNS  N+IWKV + G ASI S SA  + HP+   E +SS GLNG 
Sbjct: 149 IANDVAADFKGNAYVTNSVGNYIWKVNEKGEASILSNSARFTEHPVIIEEKFSSCGLNGV 208

Query: 129 VYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRRDGVVLVVSYRKL- 188
           VY SKGYLLVVQ+NTGKM++VDADDG ARLVLLNEDL GADG+A+R DGVVLVVS R++ 
Sbjct: 209 VYNSKGYLLVVQTNTGKMFKVDADDGVARLVLLNEDLVGADGVALRNDGVVLVVSLRRVW 268

Query: 189 CSRLSRSWI---------LNCPGFPNS------EYALRIHSRLI 217
             + +  W          L+  GFP S      E A  +H R++
Sbjct: 269 LLKSNDGWSQGVVFDKIDLDDEGFPTSIVVRERERAYVLHGRMM 312

[Close]

BLAST of CmaCh04G000590 vs. NCBI nr
Match: gi|950969347|ref|XP_014499805.1| (PREDICTED: uncharacterized protein LOC106760882 [Vigna radiata var. radiata])

HSP 1 Score: 161.0 bits (406), Expect = 3.6e-36
Identity = 80/119 (67.23%), Postives = 95/119 (79.83%), Query Frame = 1


Query: 69  VANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITANEVYSSSGLNGA 128
           VAN +AV FKGNA+VTNS  N+IWKV + G A IFS SA  + HP+   E +SS GLNG 
Sbjct: 146 VANDVAVDFKGNAYVTNSGGNYIWKVSEKGEAGIFSNSARFTEHPVIIEERFSSCGLNGL 205

Query: 129 VYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRRDGVVLVVSYRKL 188
           VY  KGYLLVVQ+NTGKM++VDADDG ARLVLLNEDL GADG+A+R DGVVLVVS +++
Sbjct: 206 VYNGKGYLLVVQTNTGKMFKVDADDGVARLVLLNEDLVGADGVALRNDGVVLVVSLKRV 264

[Close]

BLAST of CmaCh04G000590 vs. NCBI nr
Match: gi|1012365591|gb|KYP76773.1| (hypothetical protein KK1_021027 [Cajanus cajan])

HSP 1 Score: 161.0 bits (406), Expect = 3.6e-36
Identity = 81/127 (63.78%), Postives = 99/127 (77.95%), Query Frame = 1


Query: 61  SSNSNRCPVANGIAVVFKGNAFVTNSAENFIWKVEKHGSASIFSKSASCSFHPITANEVY 120
           ++   R P+AN +A  F GNA+VTN+A N+IWKV  +G A IFSKSA  + H +  + VY
Sbjct: 133 AAGDERRPIANDVAADFGGNAYVTNAAGNYIWKVNNNGEAWIFSKSARFTEHAVVGDTVY 192

Query: 121 SSSGLNGAVYVSKGYLLVVQSNTGKMYRVDADDGTARLVLLNEDLKGADGIAMRRDGVVL 180
           S  GLNG V+VSKGYLLVVQSNTGKM++VDA+DG+AR VLLNEDL GAD +A+R DGVVL
Sbjct: 193 SVCGLNGIVHVSKGYLLVVQSNTGKMFKVDAEDGSAREVLLNEDLMGADDVALRGDGVVL 252

Query: 181 VVSYRKL 188
           VVSY KL
Sbjct: 253 VVSYNKL 259

The following BLAST results are available for this feature:

BLAST of CmaCh04G000590 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh04G000590 vs. TrEMBL


Match Name	E-value	Identity	Description
V7ATY6_PHAVU	5.0e-37	54.88	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G073100g PE=4 SV=1	[more]
A0A151UBT5_CAJCA	2.5e-36	63.78	Uncharacterized protein OS=Cajanus cajan GN=KK1_021027 PE=4 SV=1	[more]
B9MTT6_POPTR	1.0e-34	62.31	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s11230g PE=4 SV=1	[more]
A0A0L9UHP1_PHAAN	1.4e-34	60.15	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g240900 PE=4 SV=1	[more]
A0A0S3RBC9_PHAAN	1.4e-34	60.15	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G054400 PE=...	[more]

BLAST of CmaCh04G000590 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01410.1	5.5e-35	56.00	NHL domain-containing protein	[more]

BLAST of CmaCh04G000590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109577\|ref\|XP_008454779.1\|	4.8e-49	81.06	PREDICTED: uncharacterized protein LOC103495097 [Cucumis melo]	[more]
gi\|449445350\|ref\|XP_004140436.1\|	9.1e-48	78.79	PREDICTED: uncharacterized protein LOC101209037 [Cucumis sativus]	[more]
gi\|593269198\|ref\|XP_007136776.1\|	7.2e-37	54.88	hypothetical protein PHAVU_009G073100g [Phaseolus vulgaris]	[more]
gi\|950969347\|ref\|XP_014499805.1\|	3.6e-36	67.23	PREDICTED: uncharacterized protein LOC106760882 [Vigna radiata var. radiata]	[more]
gi\|1012365591\|gb\|KYP76773.1\|	3.6e-36	63.78	hypothetical protein KK1_021027 [Cajanus cajan]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011042	6-blade_b-propeller_TolB-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G000590.1	CmaCh04G000590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	G3DSA:2.120.10.30		coord: 220..258 score: 7.5E-11coord: 70..184 score: 7.5
None	No IPR available	PANTHER	PTHR31460	FAMILY NOT NAMED	coord: 68..187 score: 1.6
None	No IPR available	PANTHER	PTHR31460:SF3	SUBFAMILY NOT NAMED	coord: 68..187 score: 1.6
None	No IPR available	unknown	SSF101898	NHL repeat	coord: 70..184 score: 4.97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh04G000590	CsaUNG019180	Cucumber (Chinese Long) v2	cmacuB707
CmaCh04G000590	MELO3C018333	Melon (DHL92) v3.5.1	cmameB659
CmaCh04G000590	ClCG07G006240	Watermelon (Charleston Gray)	cmawcgB674
CmaCh04G000590	CSPI04G27840	Wild cucumber (PI 183967)	cmacpiB720
CmaCh04G000590	CmoCh04G010800	Cucurbita moschata (Rifu)	cmacmoB730
CmaCh04G000590	Lsi04G011340	Bottle gourd (USVL1VR-Ls)	cmalsiB680
CmaCh04G000590	Cp4.1LG01g07610	Cucurbita pepo (Zucchini)	cmacpeB722
CmaCh04G000590	Cp4.1LG01g06370	Cucurbita pepo (Zucchini)	cmacpeB720
CmaCh04G000590	MELO3C018333.2	Melon (DHL92) v3.6.1	cmamedB746
CmaCh04G000590	CsaV3_5G013550	Cucumber (Chinese Long) v3	cmacucB0893
CmaCh04G000590	Cla97C07G134210	Watermelon (97103) v2	cmawmbB781
CmaCh04G000590	Bhi07G000285	Wax gourd	cmawgoB0890
CmaCh04G000590	CsGy5G010190	Cucumber (Gy14) v2	cgybcmaB681
CmaCh04G000590	Carg22005	Silver-seed gourd	carcmaB0242

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh04G000590	CmaCh04G010020	Cucurbita maxima (Rimu)	cmacmaB531

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh04G000590	Melon (DHL92) v3.6.1	cmamedB732
CmaCh04G000590	Silver-seed gourd	carcmaB0949
CmaCh04G000590	Watermelon (97103) v2	cmawmbB709
CmaCh04G000590	Wax gourd	cmawgoB0830
CmaCh04G000590	Cucurbita maxima (Rimu)	cmacmaB539
CmaCh04G000590	Cucurbita moschata (Rifu)	cmacmoB728
CmaCh04G000590	Melon (DHL92) v3.5.1	cmameB639
CmaCh04G000590	Melon (DHL92) v3.5.1	cmameB648
CmaCh04G000590	Watermelon (Charleston Gray)	cmawcgB636
CmaCh04G000590	Watermelon (97103) v1	cmawmB697
CmaCh04G000590	Watermelon (97103) v1	cmawmB713