CmaCh04G000140 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh04G000140
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionZinc finger protein 4
LocationCma_Chr04 : 67207 .. 67944 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATCACCAAAGTTGAATTTGGAATGGGAAGAAGATTCAGAAGTGAGCACCCGAGCTGCTTCTGACATGGCTGTACCTGAAGCAACCCCTAATCCCTCGAAGGACAGTAGTAGTACCTCCTGCCTCACCAACTCGATAAAAGGTAATACCAATCAAGGTTTGGTTTCTGTTGACTTGACACTTCATTTCAACCCAAATGATGTCGACGCAAATGGTAGTGGTGAGACTAGTAGTGAAGCAGTTGGCCATGTTTCTGGCCCAACAAACCCCAGGATGTTCTCTTGCAATTACTGTCGACGTAAATTCTTCAGCTCTCAGGCCTTGGGTGGCCACCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGGATGAGTATGTTCTCTAATAGATATACTAGCTTGGCTTCACTTCCACTTCATGGTTCTGCATATCGGTCGCTCGAGATCGAAGCTCATGCTGCAGTGCACCATAAAATCTTACCTGCACAACGGCCATTTATTGCTAGAAATGGAGTCACGTTTGATGAAGGGTACATTGGAATGCCATTTTTTATGGAAGATGAGGATGTTGCTCCATTTTGGCCTGGGAGTTTCCGACGAGTAAACGAGAGATCTACTGGTTCTATGCCTCGGGAAGTATCTCAAGTTCCAAGTCCAAAATCTGGTACGAGCATGGCACCGCCGAAAATGAGTTGTTCGCCCGATCTTACTTTAAGACTCTAA

mRNA sequence

ATGCAATCACCAAAGTTGAATTTGGAATGGGAAGAAGATTCAGAAGTGAGCACCCGAGCTGCTTCTGACATGGCTGTACCTGAAGCAACCCCTAATCCCTCGAAGGACAGTAGTAGTACCTCCTGCCTCACCAACTCGATAAAAGGTAATACCAATCAAGGTTTGGTTTCTGTTGACTTGACACTTCATTTCAACCCAAATGATGTCGACGCAAATGGTAGTGGTGAGACTAGTAGTGAAGCAGTTGGCCATGTTTCTGGCCCAACAAACCCCAGGATGTTCTCTTGCAATTACTGTCGACGTAAATTCTTCAGCTCTCAGGCCTTGGGTGGCCACCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGGATGAGTATGTTCTCTAATAGATATACTAGCTTGGCTTCACTTCCACTTCATGGTTCTGCATATCGGTCGCTCGAGATCGAAGCTCATGCTGCAGTGCACCATAAAATCTTACCTGCACAACGGCCATTTATTGCTAGAAATGGAGTCACGTTTGATGAAGGGTACATTGGAATGCCATTTTTTATGGAAGATGAGGATGTTGCTCCATTTTGGCCTGGGAGTTTCCGACGAGTAAACGAGAGATCTACTGGTTCTATGCCTCGGGAAGTATCTCAAGTTCCAAGTCCAAAATCTGGTACGAGCATGGCACCGCCGAAAATGAGTTGTTCGCCCGATCTTACTTTAAGACTCTAA

Coding sequence (CDS)

ATGCAATCACCAAAGTTGAATTTGGAATGGGAAGAAGATTCAGAAGTGAGCACCCGAGCTGCTTCTGACATGGCTGTACCTGAAGCAACCCCTAATCCCTCGAAGGACAGTAGTAGTACCTCCTGCCTCACCAACTCGATAAAAGGTAATACCAATCAAGGTTTGGTTTCTGTTGACTTGACACTTCATTTCAACCCAAATGATGTCGACGCAAATGGTAGTGGTGAGACTAGTAGTGAAGCAGTTGGCCATGTTTCTGGCCCAACAAACCCCAGGATGTTCTCTTGCAATTACTGTCGACGTAAATTCTTCAGCTCTCAGGCCTTGGGTGGCCACCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGGATGAGTATGTTCTCTAATAGATATACTAGCTTGGCTTCACTTCCACTTCATGGTTCTGCATATCGGTCGCTCGAGATCGAAGCTCATGCTGCAGTGCACCATAAAATCTTACCTGCACAACGGCCATTTATTGCTAGAAATGGAGTCACGTTTGATGAAGGGTACATTGGAATGCCATTTTTTATGGAAGATGAGGATGTTGCTCCATTTTGGCCTGGGAGTTTCCGACGAGTAAACGAGAGATCTACTGGTTCTATGCCTCGGGAAGTATCTCAAGTTCCAAGTCCAAAATCTGGTACGAGCATGGCACCGCCGAAAATGAGTTGTTCGCCCGATCTTACTTTAAGACTCTAA

Protein sequence

MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFDEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMSCSPDLTLRL
Homology
[Close]
BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 98/267 (36.70%), Postives = 138/267 (51.69%), Query Frame = 1 

Query: 4   PKLNLEWEEDS-EVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDLTL 63
           P L+LE E  S   S++ AS+++       P   + S S   N+   N N  L S  LTL
Sbjct: 3   PILDLEIEASSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNN---NNNLDLESSSLTL 62

Query: 64  HFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTM 123
             +     +N   +   +         + R+FSCNYC+RKF+SSQALGGHQNAHKRERT+
Sbjct: 63  PLSSTSESSNPEQQQQQQP------SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 122

Query: 124 AKRAMRMSM---FSNRYTS-----------LASLPLHGS------AYRSLEIEAHAAVHH 183
           AKRAMRM +   F  R +S           L+ LPLHGS      ++R+L I AH++ H 
Sbjct: 123 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHD 182

Query: 184 KILPAQRP-FIARNGVTFDEGYIG--MPFFMEDEDVAPFWPGSFRR-VNERSTGSMPREV 243
             +  Q P  + RN   F++GY G  +PF++ED++    WPGSFR+  N  +  +    +
Sbjct: 183 VSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVEAGNDNL 242

Query: 244 SQVPSPKSGTSMAPPKMSCSPDLTLRL 246
            +          A    S  PDLTL+L
Sbjct: 243 GERKMDFLDVKQAMDMESSLPDLTLKL 260

[Close]
BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-24
Identity = 94/234 (40.17%), Postives = 122/234 (52.14%), Query Frame = 1 

Query: 34  SKDSSSTSCLTNSIKGNTNQGL-------VSVDLTLHFNPNDVDANGSGETSSEAVGHVS 93
           S D+S  +  +   + ++NQ L       VS+DL L    ND   + +  T  EA     
Sbjct: 4   SDDASRETPASRGGEASSNQDLSKPESNHVSLDLKL----NDTFNDDTKSTKCEA----- 63

Query: 94  GPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMS-MFSNR---YTSLASL 153
              NPR+FSCNYCRRKF+SSQALGGHQNAHKRERTMAKRAM M  MF +    YT  +S 
Sbjct: 64  ---NPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS- 123

Query: 154 PLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFDEGYIG--MPFFMEDEDVAP--F 213
                   SL ++AH+ + H  L   +P ++R      +GY G  +P F + +D     F
Sbjct: 124 --------SLGMQAHSGLLHHTLSQPQPLVSR---FHHQGYFGNTVPLFFDYDDGGSDFF 183

Query: 214 WPGSFRRVNERSTGSMPREVSQVPSPKSGTSM-------APPKMSCSPDLTLRL 246
           WPGSFR+V E +       V  V S +SG  +            S  PDLTLRL
Sbjct: 184 WPGSFRQVVEEAEA----PVVVVASTESGLDLNSVAANGGVDNNSSKPDLTLRL 209

[Close]
BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.7e-17
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1 

Query: 74  SGETSSEAVGHVSGP----TNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAM-- 133
           S +TSS +  H         +PR+FSCNYC+RKF+SSQALGGHQNAHKRERT+AKR    
Sbjct: 44  SFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYY 103

Query: 134 RMSMFS-------------NRYTSLASLPLHGSAYR--SLEIEAHAAVH 162
           +M++ S             +R+ S+ASLPLHGS     +L I+AH+ +H
Sbjct: 104 KMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIH 152

[Close]
BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-16
Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 1 

Query: 52  NQGLVSVDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGG 111
           NQ +   +  +H + ++++     + ++  V   +  T  ++FSCNYC+R F+SSQALGG
Sbjct: 19  NQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGG 78

Query: 112 HQNAHKRERTMAKRAMRM----SMFSNRYTSLASLPLHG--SAYRSLEIEAHAAVH 162
           HQNAHKRERT+AKR  RM    S F + Y   + LP HG  + +RSL I+AH+  H
Sbjct: 79  HQNAHKRERTLAKRGQRMAASASAFGHPY-GFSPLPFHGQYNNHRSLGIQAHSISH 133

[Close]
BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 1 

Query: 58  VDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHK 117
           ++L L   P+ + ++ S  T+S      S    PR+FSCNYC+RKF+SSQALGGHQNAHK
Sbjct: 21  LNLELVLEPSSMSSSSSSSTNSS-----SCLEQPRVFSCNYCQRKFYSSQALGGHQNAHK 80

Query: 118 RERTMAKRAMRMSMFSNRYTSLASLPLHG 147
            ERT+AK++  +   SN   S    P  G
Sbjct: 81  LERTLAKKSRELFRSSNTVDSDQPYPFSG 104

[Close]
BLAST of CmaCh04G000140 vs. TrEMBL
Match: A0A0A0KMD6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G255670 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.5e-88
Identity = 175/246 (71.14%), Postives = 196/246 (79.67%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S++A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 1   MGSPMFNLECEKDSEMSSKAFSDTA---------KDSGTTSCLTNSIKANHDQGLVSLDL 60

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN ND+DA GSGETSS+ VGH+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 61  TLHFNSNDIDAKGSGETSSDVVGHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 120

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 121 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 180

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMS-CSP 240
           +GYIGM +F+E++DV PFWPGSFRRVN     S  RE S++PS  S T MAP   S  SP
Sbjct: 181 QGYIGMQYFVEEDDVGPFWPGSFRRVNGEFIDSTAREASEIPSLNSDTRMAPSTTSTSSP 237

Query: 241 DLTLRL 246
           DLTLRL
Sbjct: 241 DLTLRL 237

[Close]
BLAST of CmaCh04G000140 vs. TrEMBL
Match: F6HFB1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06200 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 145/248 (58.47%), Postives = 189/248 (76.21%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTS-CLTNSIKGNTNQGLVSVD 60
           M+ P  N+E E++SEVS++ AS++++ E + +PSKDS++TS CLTN IK   +QG VS+D
Sbjct: 1   MEPPNYNVESEDESEVSSQVASNVSIQETSSDPSKDSTTTSSCLTNLIKLQPDQGSVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           LTL FNPND    G GE+SS+AV      T P++FSCNYCRRKFFSSQALGGHQNAHKRE
Sbjct: 61  LTLCFNPNDTKLKGMGESSSDAVAQAPVATAPKVFSCNYCRRKFFSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RT+AKRAMRM MF++RYTSL+SLPLHGSA+RSL IEAH+++H +++P +RP   R G  F
Sbjct: 121 RTLAKRAMRMGMFADRYTSLSSLPLHGSAFRSLGIEAHSSLHQRMVPLERP-DTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM--SC 240
           ++GY G+P F+EDE+   FWPGSFR++ ER  GS   E++Q P+  +   MAPP    S 
Sbjct: 181 EQGYYGLPVFIEDEEAELFWPGSFRQIGERVGGSAIPELAQGPN-INFVPMAPPPTTDSS 240

Query: 241 SPDLTLRL 246
           SPDLTL+L
Sbjct: 241 SPDLTLKL 246

[Close]
BLAST of CmaCh04G000140 vs. TrEMBL
Match: B9HJJ4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13730g PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-69
Identity = 141/247 (57.09%), Postives = 184/247 (74.49%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSS-TSCLTNSIKGNTNQGLVSVD 60
           M SPK   ++E D EVS++ AS+++V E +P+PSKDS++ +S LT+ +K   N   VS+D
Sbjct: 1   MISPKSKSDFENDLEVSSQVASNISVHELSPDPSKDSTTPSSYLTDLVKHQENSVPVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           L+LHFN ++++  G+GETS E   H    T PR+FSCNYCRRKF+SSQALGGHQNAHKRE
Sbjct: 61  LSLHFNSSEIELKGTGETSIEVAAHTPATTIPRVFSCNYCRRKFYSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RTMAKRAMRM MFS+RYT+LASLPL+GSA+RSL I+AHAA+H  I+ +Q P + R G  F
Sbjct: 121 RTMAKRAMRMGMFSDRYTNLASLPLNGSAFRSLGIKAHAAMHQSIIQSQTPPVTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM-SCS 240
           ++GY GMP FMED+DV P+WPGSFRRV E   G+   E++Q P+        PP+  S +
Sbjct: 181 EQGYYGMPMFMEDDDVGPYWPGSFRRVGEAVGGNSGLELAQSPNMNFEARAPPPRTDSSA 240

Query: 241 PDLTLRL 246
           PDLTL+L
Sbjct: 241 PDLTLKL 247

[Close]
BLAST of CmaCh04G000140 vs. TrEMBL
Match: A0A061E8M6_THECC (Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 146/251 (58.17%), Postives = 178/251 (70.92%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSST-SCLTNSIKGNTNQGLVSVD 60
           M  P   LE E DSE S++ AS+++  EATP+ SKDS++T SCLTN IK     G VS+D
Sbjct: 1   MTPPNPGLESENDSEASSQVASNISAQEATPDASKDSTTTASCLTNPIKAQPETGSVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           LTLHF   D    G+G+T SE   H    T PR+FSCNYCRRKF+SSQALGGHQNAHKRE
Sbjct: 61  LTLHFRATDAVMKGTGDTRSEIATHSLSATIPRVFSCNYCRRKFYSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RTMAKRAMRM +FS+RYTSLASLPLHGS +RSL I+AH+A+H  I+ +QRP   R G  F
Sbjct: 121 RTMAKRAMRMGIFSDRYTSLASLPLHGSTFRSLGIKAHSAMHQGIISSQRPIDTRAGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSM----APPKM 240
           D+GY GMP FMED+DV  FWPGSFR+VNE  +G++  E +   +  S        +PP+ 
Sbjct: 181 DQGYFGMPMFMEDDDVDLFWPGSFRQVNEGVSGNLALEFAPNSTQSSNMGFVAMASPPRT 240

Query: 241 -SCSPDLTLRL 246
            S SPDLTL+L
Sbjct: 241 DSSSPDLTLKL 251

[Close]
BLAST of CmaCh04G000140 vs. TrEMBL
Match: V4UB17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.8e-68
Identity = 146/248 (58.87%), Postives = 180/248 (72.58%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M  P  NLE E DSEVS+  AS+++  EA+P PSKD++S SCLTN IK N + G +S+DL
Sbjct: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKDTNS-SCLTNVIKLNPDPGPLSLDL 60

Query: 61  TLHFNPNDVDA-NGSGETSSE-AVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKR 120
           TLHF  ND+D   G+GETS E A       T PR+FSCNYCRRKF+SSQALGGHQNAHKR
Sbjct: 61  TLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKR 120

Query: 121 ERTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVT 180
           ERTMAKRAMRM +FS+RYTSLASLPLHGSA+RSL I+AHAA+H  ++P QRP   R G  
Sbjct: 121 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGAR 180

Query: 181 FDEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM-SC 240
           F++GY  MP FMED+D+  FWPGSFR+V+E   G+   + +Q  +        PP+  S 
Sbjct: 181 FEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDSS 240

Query: 241 SPDLTLRL 246
           +PDLTL+L
Sbjct: 241 APDLTLKL 247

[Close]
BLAST of CmaCh04G000140 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 98/267 (36.70%), Postives = 138/267 (51.69%), Query Frame = 1 

Query: 4   PKLNLEWEEDS-EVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDLTL 63
           P L+LE E  S   S++ AS+++       P   + S S   N+   N N  L S  LTL
Sbjct: 3   PILDLEIEASSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNN---NNNLDLESSSLTL 62

Query: 64  HFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTM 123
             +     +N   +   +         + R+FSCNYC+RKF+SSQALGGHQNAHKRERT+
Sbjct: 63  PLSSTSESSNPEQQQQQQP------SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 122

Query: 124 AKRAMRMSM---FSNRYTS-----------LASLPLHGS------AYRSLEIEAHAAVHH 183
           AKRAMRM +   F  R +S           L+ LPLHGS      ++R+L I AH++ H 
Sbjct: 123 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHD 182

Query: 184 KILPAQRP-FIARNGVTFDEGYIG--MPFFMEDEDVAPFWPGSFRR-VNERSTGSMPREV 243
             +  Q P  + RN   F++GY G  +PF++ED++    WPGSFR+  N  +  +    +
Sbjct: 183 VSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVEAGNDNL 242

Query: 244 SQVPSPKSGTSMAPPKMSCSPDLTLRL 246
            +          A    S  PDLTL+L
Sbjct: 243 GERKMDFLDVKQAMDMESSLPDLTLKL 260

[Close]
BLAST of CmaCh04G000140 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-25
Identity = 94/234 (40.17%), Postives = 122/234 (52.14%), Query Frame = 1 

Query: 34  SKDSSSTSCLTNSIKGNTNQGL-------VSVDLTLHFNPNDVDANGSGETSSEAVGHVS 93
           S D+S  +  +   + ++NQ L       VS+DL L    ND   + +  T  EA     
Sbjct: 4   SDDASRETPASRGGEASSNQDLSKPESNHVSLDLKL----NDTFNDDTKSTKCEA----- 63

Query: 94  GPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMS-MFSNR---YTSLASL 153
              NPR+FSCNYCRRKF+SSQALGGHQNAHKRERTMAKRAM M  MF +    YT  +S 
Sbjct: 64  ---NPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS- 123

Query: 154 PLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFDEGYIG--MPFFMEDEDVAP--F 213
                   SL ++AH+ + H  L   +P ++R      +GY G  +P F + +D     F
Sbjct: 124 --------SLGMQAHSGLLHHTLSQPQPLVSR---FHHQGYFGNTVPLFFDYDDGGSDFF 183

Query: 214 WPGSFRRVNERSTGSMPREVSQVPSPKSGTSM-------APPKMSCSPDLTLRL 246
           WPGSFR+V E +       V  V S +SG  +            S  PDLTLRL
Sbjct: 184 WPGSFRQVVEEAEA----PVVVVASTESGLDLNSVAANGGVDNNSSKPDLTLRL 209

[Close]
BLAST of CmaCh04G000140 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-18
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1 

Query: 74  SGETSSEAVGHVSGP----TNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAM-- 133
           S +TSS +  H         +PR+FSCNYC+RKF+SSQALGGHQNAHKRERT+AKR    
Sbjct: 44  SFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYY 103

Query: 134 RMSMFS-------------NRYTSLASLPLHGSAYR--SLEIEAHAAVH 162
           +M++ S             +R+ S+ASLPLHGS     +L I+AH+ +H
Sbjct: 104 KMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIH 152

[Close]
BLAST of CmaCh04G000140 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-17
Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 1 

Query: 52  NQGLVSVDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGG 111
           NQ +   +  +H + ++++     + ++  V   +  T  ++FSCNYC+R F+SSQALGG
Sbjct: 19  NQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGG 78

Query: 112 HQNAHKRERTMAKRAMRM----SMFSNRYTSLASLPLHG--SAYRSLEIEAHAAVH 162
           HQNAHKRERT+AKR  RM    S F + Y   + LP HG  + +RSL I+AH+  H
Sbjct: 79  HQNAHKRERTLAKRGQRMAASASAFGHPY-GFSPLPFHGQYNNHRSLGIQAHSISH 133

[Close]
BLAST of CmaCh04G000140 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 1 

Query: 86  SGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRM---SMFSNRYTSLASL 145
           S  T  ++FSCNYC+R F+SSQALGGHQNAHKRERT+AKR  RM   + F + Y   A +
Sbjct: 96  STSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPY-GFAPV 155

Query: 146 PLHGS-AYRSLEIEAHAAVH 162
           P HG  + R+L I+AH+  H
Sbjct: 156 PFHGQYSNRTLGIQAHSMSH 174

[Close]
BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|659114013|ref|XP_008456866.1| (PREDICTED: zinc finger protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88
Identity = 172/245 (70.20%), Postives = 195/245 (79.59%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S +A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 46  MGSPMFNLECEKDSEMSGKAFSDTA---------KDSGTTSCLTNSIKANPDQGLVSLDL 105

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN N++D+ GSGETSS+ V H+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 106 TLHFNSNNIDSKGSGETSSDVVAHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 165

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 166 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 225

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMSCSPD 240
           +GYIG+P+F+E++DV PFWPGSFRRVN    GS P+E S+ PSP S   M P   S SPD
Sbjct: 226 QGYIGVPYFVEEDDVGPFWPGSFRRVNGEFIGSKPQEESETPSPNSDMRMPPSTTSTSPD 281

Query: 241 LTLRL 246
           LTLRL
Sbjct: 286 LTLRL 281

[Close]
BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|659114015|ref|XP_008456867.1| (PREDICTED: zinc finger protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88
Identity = 172/245 (70.20%), Postives = 195/245 (79.59%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S +A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 1   MGSPMFNLECEKDSEMSGKAFSDTA---------KDSGTTSCLTNSIKANPDQGLVSLDL 60

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN N++D+ GSGETSS+ V H+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 61  TLHFNSNNIDSKGSGETSSDVVAHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 120

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 121 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 180

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMSCSPD 240
           +GYIG+P+F+E++DV PFWPGSFRRVN    GS P+E S+ PSP S   M P   S SPD
Sbjct: 181 QGYIGVPYFVEEDDVGPFWPGSFRRVNGEFIGSKPQEESETPSPNSDMRMPPSTTSTSPD 236

Query: 241 LTLRL 246
           LTLRL
Sbjct: 241 LTLRL 236

[Close]
BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|449445314|ref|XP_004140418.1| (PREDICTED: zinc finger protein 4-like [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 5.1e-88
Identity = 175/246 (71.14%), Postives = 196/246 (79.67%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S++A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 1   MGSPMFNLECEKDSEMSSKAFSDTA---------KDSGTTSCLTNSIKANHDQGLVSLDL 60

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN ND+DA GSGETSS+ VGH+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 61  TLHFNSNDIDAKGSGETSSDVVGHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 120

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 121 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 180

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMS-CSP 240
           +GYIGM +F+E++DV PFWPGSFRRVN     S  RE S++PS  S T MAP   S  SP
Sbjct: 181 QGYIGMQYFVEEDDVGPFWPGSFRRVNGEFIDSTAREASEIPSLNSDTRMAPSTTSTSSP 237

Query: 241 DLTLRL 246
           DLTLRL
Sbjct: 241 DLTLRL 237

[Close]
BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|225424442|ref|XP_002285121.1| (PREDICTED: zinc finger protein 4-like [Vitis vinifera])

HSP 1 Score: 271.2 bits (692), Expect = 1.8e-69
Identity = 145/248 (58.47%), Postives = 189/248 (76.21%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTS-CLTNSIKGNTNQGLVSVD 60
           M+ P  N+E E++SEVS++ AS++++ E + +PSKDS++TS CLTN IK   +QG VS+D
Sbjct: 1   MEPPNYNVESEDESEVSSQVASNVSIQETSSDPSKDSTTTSSCLTNLIKLQPDQGSVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           LTL FNPND    G GE+SS+AV      T P++FSCNYCRRKFFSSQALGGHQNAHKRE
Sbjct: 61  LTLCFNPNDTKLKGMGESSSDAVAQAPVATAPKVFSCNYCRRKFFSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RT+AKRAMRM MF++RYTSL+SLPLHGSA+RSL IEAH+++H +++P +RP   R G  F
Sbjct: 121 RTLAKRAMRMGMFADRYTSLSSLPLHGSAFRSLGIEAHSSLHQRMVPLERP-DTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM--SC 240
           ++GY G+P F+EDE+   FWPGSFR++ ER  GS   E++Q P+  +   MAPP    S 
Sbjct: 181 EQGYYGLPVFIEDEEAELFWPGSFRQIGERVGGSAIPELAQGPN-INFVPMAPPPTTDSS 240

Query: 241 SPDLTLRL 246
           SPDLTL+L
Sbjct: 241 SPDLTLKL 246

[Close]
BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|224099591|ref|XP_002311543.1| (hypothetical protein POPTR_0008s13730g [Populus trichocarpa])

HSP 1 Score: 270.4 bits (690), Expect = 3.1e-69
Identity = 141/247 (57.09%), Postives = 184/247 (74.49%), Query Frame = 1 

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSS-TSCLTNSIKGNTNQGLVSVD 60
           M SPK   ++E D EVS++ AS+++V E +P+PSKDS++ +S LT+ +K   N   VS+D
Sbjct: 1   MISPKSKSDFENDLEVSSQVASNISVHELSPDPSKDSTTPSSYLTDLVKHQENSVPVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           L+LHFN ++++  G+GETS E   H    T PR+FSCNYCRRKF+SSQALGGHQNAHKRE
Sbjct: 61  LSLHFNSSEIELKGTGETSIEVAAHTPATTIPRVFSCNYCRRKFYSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RTMAKRAMRM MFS+RYT+LASLPL+GSA+RSL I+AHAA+H  I+ +Q P + R G  F
Sbjct: 121 RTMAKRAMRMGMFSDRYTNLASLPLNGSAFRSLGIKAHAAMHQSIIQSQTPPVTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM-SCS 240
           ++GY GMP FMED+DV P+WPGSFRRV E   G+   E++Q P+        PP+  S +
Sbjct: 181 EQGYYGMPMFMEDDDVGPYWPGSFRRVGEAVGGNSGLELAQSPNMNFEARAPPPRTDSSA 240

Query: 241 PDLTLRL 246
           PDLTL+L
Sbjct: 241 PDLTLKL 247

The following BLAST results are available for this feature:
BLAST of CmaCh04G000140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP4_ARATH1.9e-2636.70Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
ZFP7_ARATH6.7e-2440.17Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP1_ARATH4.7e-1748.62Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP3_ARATH6.8e-1642.24Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP2_ARATH2.0e-1246.07Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
BLAST of CmaCh04G000140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMD6_CUCSA3.5e-8871.14Uncharacterized protein OS=Cucumis sativus GN=Csa_5G255670 PE=4 SV=1[more]
F6HFB1_VITVI1.3e-6958.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06200 PE=4 SV=... [more]
B9HJJ4_POPTR2.2e-6957.09Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13730g PE=4 SV=1[more]
A0A061E8M6_THECC1.1e-6858.17Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1[more]
V4UB17_9ROSI1.8e-6858.87Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1[more]
BLAST of CmaCh04G000140 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66140.11.1e-2736.70 zinc finger protein 4[more]
AT1G24625.13.8e-2540.17 zinc finger protein 7[more]
AT1G80730.12.6e-1848.62 zinc-finger protein 1[more]
AT5G25160.13.8e-1742.24 zinc finger protein 3[more]
AT5G10970.11.2e-1555.00 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of CmaCh04G000140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114013|ref|XP_008456866.1|1.3e-8870.20PREDICTED: zinc finger protein 4-like isoform X1 [Cucumis melo][more]
gi|659114015|ref|XP_008456867.1|1.3e-8870.20PREDICTED: zinc finger protein 4-like isoform X2 [Cucumis melo][more]
gi|449445314|ref|XP_004140418.1|5.1e-8871.14PREDICTED: zinc finger protein 4-like [Cucumis sativus][more]
gi|225424442|ref|XP_002285121.1|1.8e-6958.47PREDICTED: zinc finger protein 4-like [Vitis vinifera][more]
gi|224099591|ref|XP_002311543.1|3.1e-6957.09hypothetical protein POPTR_0008s13730g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G000140.1CmaCh04G000140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 96..116
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 94..121
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 89..122
score: 9.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh04G000140MELO3C020054Melon (DHL92) v3.5.1cmameB664
CmaCh04G000140ClCG11G001020Watermelon (Charleston Gray)cmawcgB626
CmaCh04G000140CmoCh04G000140Cucurbita moschata (Rifu)cmacmoB728
CmaCh04G000140Lsi11G000080Bottle gourd (USVL1VR-Ls)cmalsiB634
CmaCh04G000140Cp4.1LG01g06500Cucurbita pepo (Zucchini)cmacpeB720
CmaCh04G000140MELO3C020054.2Melon (DHL92) v3.6.1cmamedB735
CmaCh04G000140Cla97C11G207390Watermelon (97103) v2cmawmbB730
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G000140Cucumber (Chinese Long) v3cmacucB0876
CmaCh04G000140Wax gourdcmawgoB0899
CmaCh04G000140Cucurbita maxima (Rimu)cmacmaB531
CmaCh04G000140Cucurbita moschata (Rifu)cmacmoB730
CmaCh04G000140Wild cucumber (PI 183967)cmacpiB751
CmaCh04G000140Wild cucumber (PI 183967)cmacpiB772
CmaCh04G000140Watermelon (97103) v1cmawmB743
CmaCh04G000140Cucurbita pepo (Zucchini)cmacpeB722
CmaCh04G000140Cucumber (Gy14) v2cgybcmaB664
CmaCh04G000140Silver-seed gourdcarcmaB0949