CmaCh04G000140 (gene) Cucurbita maxima (Rimu)

NameCmaCh04G000140
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionZinc finger protein 4
LocationCma_Chr04 : 67207 .. 67944 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATCACCAAAGTTGAATTTGGAATGGGAAGAAGATTCAGAAGTGAGCACCCGAGCTGCTTCTGACATGGCTGTACCTGAAGCAACCCCTAATCCCTCGAAGGACAGTAGTAGTACCTCCTGCCTCACCAACTCGATAAAAGGTAATACCAATCAAGGTTTGGTTTCTGTTGACTTGACACTTCATTTCAACCCAAATGATGTCGACGCAAATGGTAGTGGTGAGACTAGTAGTGAAGCAGTTGGCCATGTTTCTGGCCCAACAAACCCCAGGATGTTCTCTTGCAATTACTGTCGACGTAAATTCTTCAGCTCTCAGGCCTTGGGTGGCCACCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGGATGAGTATGTTCTCTAATAGATATACTAGCTTGGCTTCACTTCCACTTCATGGTTCTGCATATCGGTCGCTCGAGATCGAAGCTCATGCTGCAGTGCACCATAAAATCTTACCTGCACAACGGCCATTTATTGCTAGAAATGGAGTCACGTTTGATGAAGGGTACATTGGAATGCCATTTTTTATGGAAGATGAGGATGTTGCTCCATTTTGGCCTGGGAGTTTCCGACGAGTAAACGAGAGATCTACTGGTTCTATGCCTCGGGAAGTATCTCAAGTTCCAAGTCCAAAATCTGGTACGAGCATGGCACCGCCGAAAATGAGTTGTTCGCCCGATCTTACTTTAAGACTCTAA

mRNA sequence

ATGCAATCACCAAAGTTGAATTTGGAATGGGAAGAAGATTCAGAAGTGAGCACCCGAGCTGCTTCTGACATGGCTGTACCTGAAGCAACCCCTAATCCCTCGAAGGACAGTAGTAGTACCTCCTGCCTCACCAACTCGATAAAAGGTAATACCAATCAAGGTTTGGTTTCTGTTGACTTGACACTTCATTTCAACCCAAATGATGTCGACGCAAATGGTAGTGGTGAGACTAGTAGTGAAGCAGTTGGCCATGTTTCTGGCCCAACAAACCCCAGGATGTTCTCTTGCAATTACTGTCGACGTAAATTCTTCAGCTCTCAGGCCTTGGGTGGCCACCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGGATGAGTATGTTCTCTAATAGATATACTAGCTTGGCTTCACTTCCACTTCATGGTTCTGCATATCGGTCGCTCGAGATCGAAGCTCATGCTGCAGTGCACCATAAAATCTTACCTGCACAACGGCCATTTATTGCTAGAAATGGAGTCACGTTTGATGAAGGGTACATTGGAATGCCATTTTTTATGGAAGATGAGGATGTTGCTCCATTTTGGCCTGGGAGTTTCCGACGAGTAAACGAGAGATCTACTGGTTCTATGCCTCGGGAAGTATCTCAAGTTCCAAGTCCAAAATCTGGTACGAGCATGGCACCGCCGAAAATGAGTTGTTCGCCCGATCTTACTTTAAGACTCTAA

Coding sequence (CDS)

ATGCAATCACCAAAGTTGAATTTGGAATGGGAAGAAGATTCAGAAGTGAGCACCCGAGCTGCTTCTGACATGGCTGTACCTGAAGCAACCCCTAATCCCTCGAAGGACAGTAGTAGTACCTCCTGCCTCACCAACTCGATAAAAGGTAATACCAATCAAGGTTTGGTTTCTGTTGACTTGACACTTCATTTCAACCCAAATGATGTCGACGCAAATGGTAGTGGTGAGACTAGTAGTGAAGCAGTTGGCCATGTTTCTGGCCCAACAAACCCCAGGATGTTCTCTTGCAATTACTGTCGACGTAAATTCTTCAGCTCTCAGGCCTTGGGTGGCCACCAGAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGAGCGATGCGGATGAGTATGTTCTCTAATAGATATACTAGCTTGGCTTCACTTCCACTTCATGGTTCTGCATATCGGTCGCTCGAGATCGAAGCTCATGCTGCAGTGCACCATAAAATCTTACCTGCACAACGGCCATTTATTGCTAGAAATGGAGTCACGTTTGATGAAGGGTACATTGGAATGCCATTTTTTATGGAAGATGAGGATGTTGCTCCATTTTGGCCTGGGAGTTTCCGACGAGTAAACGAGAGATCTACTGGTTCTATGCCTCGGGAAGTATCTCAAGTTCCAAGTCCAAAATCTGGTACGAGCATGGCACCGCCGAAAATGAGTTGTTCGCCCGATCTTACTTTAAGACTCTAA

Protein sequence

MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFDEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMSCSPDLTLRL
BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-26
Identity = 98/267 (36.70%), Postives = 138/267 (51.69%), Query Frame = 1

Query: 4   PKLNLEWEEDS-EVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDLTL 63
           P L+LE E  S   S++ AS+++       P   + S S   N+   N N  L S  LTL
Sbjct: 3   PILDLEIEASSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNN---NNNLDLESSSLTL 62

Query: 64  HFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTM 123
             +     +N   +   +         + R+FSCNYC+RKF+SSQALGGHQNAHKRERT+
Sbjct: 63  PLSSTSESSNPEQQQQQQP------SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 122

Query: 124 AKRAMRMSM---FSNRYTS-----------LASLPLHGS------AYRSLEIEAHAAVHH 183
           AKRAMRM +   F  R +S           L+ LPLHGS      ++R+L I AH++ H 
Sbjct: 123 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHD 182

Query: 184 KILPAQRP-FIARNGVTFDEGYIG--MPFFMEDEDVAPFWPGSFRR-VNERSTGSMPREV 243
             +  Q P  + RN   F++GY G  +PF++ED++    WPGSFR+  N  +  +    +
Sbjct: 183 VSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVEAGNDNL 242

Query: 244 SQVPSPKSGTSMAPPKMSCSPDLTLRL 246
            +          A    S  PDLTL+L
Sbjct: 243 GERKMDFLDVKQAMDMESSLPDLTLKL 260

BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.7e-24
Identity = 94/234 (40.17%), Postives = 122/234 (52.14%), Query Frame = 1

Query: 34  SKDSSSTSCLTNSIKGNTNQGL-------VSVDLTLHFNPNDVDANGSGETSSEAVGHVS 93
           S D+S  +  +   + ++NQ L       VS+DL L    ND   + +  T  EA     
Sbjct: 4   SDDASRETPASRGGEASSNQDLSKPESNHVSLDLKL----NDTFNDDTKSTKCEA----- 63

Query: 94  GPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMS-MFSNR---YTSLASL 153
              NPR+FSCNYCRRKF+SSQALGGHQNAHKRERTMAKRAM M  MF +    YT  +S 
Sbjct: 64  ---NPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS- 123

Query: 154 PLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFDEGYIG--MPFFMEDEDVAP--F 213
                   SL ++AH+ + H  L   +P ++R      +GY G  +P F + +D     F
Sbjct: 124 --------SLGMQAHSGLLHHTLSQPQPLVSR---FHHQGYFGNTVPLFFDYDDGGSDFF 183

Query: 214 WPGSFRRVNERSTGSMPREVSQVPSPKSGTSM-------APPKMSCSPDLTLRL 246
           WPGSFR+V E +       V  V S +SG  +            S  PDLTLRL
Sbjct: 184 WPGSFRQVVEEAEA----PVVVVASTESGLDLNSVAANGGVDNNSSKPDLTLRL 209

BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.7e-17
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1

Query: 74  SGETSSEAVGHVSGP----TNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAM-- 133
           S +TSS +  H         +PR+FSCNYC+RKF+SSQALGGHQNAHKRERT+AKR    
Sbjct: 44  SFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYY 103

Query: 134 RMSMFS-------------NRYTSLASLPLHGSAYR--SLEIEAHAAVH 162
           +M++ S             +R+ S+ASLPLHGS     +L I+AH+ +H
Sbjct: 104 KMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIH 152

BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 6.8e-16
Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 1

Query: 52  NQGLVSVDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGG 111
           NQ +   +  +H + ++++     + ++  V   +  T  ++FSCNYC+R F+SSQALGG
Sbjct: 19  NQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGG 78

Query: 112 HQNAHKRERTMAKRAMRM----SMFSNRYTSLASLPLHG--SAYRSLEIEAHAAVH 162
           HQNAHKRERT+AKR  RM    S F + Y   + LP HG  + +RSL I+AH+  H
Sbjct: 79  HQNAHKRERTLAKRGQRMAASASAFGHPY-GFSPLPFHGQYNNHRSLGIQAHSISH 133

BLAST of CmaCh04G000140 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.0e-12
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 1

Query: 58  VDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHK 117
           ++L L   P+ + ++ S  T+S      S    PR+FSCNYC+RKF+SSQALGGHQNAHK
Sbjct: 21  LNLELVLEPSSMSSSSSSSTNSS-----SCLEQPRVFSCNYCQRKFYSSQALGGHQNAHK 80

Query: 118 RERTMAKRAMRMSMFSNRYTSLASLPLHG 147
            ERT+AK++  +   SN   S    P  G
Sbjct: 81  LERTLAKKSRELFRSSNTVDSDQPYPFSG 104

BLAST of CmaCh04G000140 vs. TrEMBL
Match: A0A0A0KMD6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G255670 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 3.5e-88
Identity = 175/246 (71.14%), Postives = 196/246 (79.67%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S++A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 1   MGSPMFNLECEKDSEMSSKAFSDTA---------KDSGTTSCLTNSIKANHDQGLVSLDL 60

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN ND+DA GSGETSS+ VGH+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 61  TLHFNSNDIDAKGSGETSSDVVGHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 120

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 121 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 180

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMS-CSP 240
           +GYIGM +F+E++DV PFWPGSFRRVN     S  RE S++PS  S T MAP   S  SP
Sbjct: 181 QGYIGMQYFVEEDDVGPFWPGSFRRVNGEFIDSTAREASEIPSLNSDTRMAPSTTSTSSP 237

Query: 241 DLTLRL 246
           DLTLRL
Sbjct: 241 DLTLRL 237

BLAST of CmaCh04G000140 vs. TrEMBL
Match: F6HFB1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06200 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-69
Identity = 145/248 (58.47%), Postives = 189/248 (76.21%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTS-CLTNSIKGNTNQGLVSVD 60
           M+ P  N+E E++SEVS++ AS++++ E + +PSKDS++TS CLTN IK   +QG VS+D
Sbjct: 1   MEPPNYNVESEDESEVSSQVASNVSIQETSSDPSKDSTTTSSCLTNLIKLQPDQGSVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           LTL FNPND    G GE+SS+AV      T P++FSCNYCRRKFFSSQALGGHQNAHKRE
Sbjct: 61  LTLCFNPNDTKLKGMGESSSDAVAQAPVATAPKVFSCNYCRRKFFSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RT+AKRAMRM MF++RYTSL+SLPLHGSA+RSL IEAH+++H +++P +RP   R G  F
Sbjct: 121 RTLAKRAMRMGMFADRYTSLSSLPLHGSAFRSLGIEAHSSLHQRMVPLERP-DTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM--SC 240
           ++GY G+P F+EDE+   FWPGSFR++ ER  GS   E++Q P+  +   MAPP    S 
Sbjct: 181 EQGYYGLPVFIEDEEAELFWPGSFRQIGERVGGSAIPELAQGPN-INFVPMAPPPTTDSS 240

Query: 241 SPDLTLRL 246
           SPDLTL+L
Sbjct: 241 SPDLTLKL 246

BLAST of CmaCh04G000140 vs. TrEMBL
Match: B9HJJ4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13730g PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-69
Identity = 141/247 (57.09%), Postives = 184/247 (74.49%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSS-TSCLTNSIKGNTNQGLVSVD 60
           M SPK   ++E D EVS++ AS+++V E +P+PSKDS++ +S LT+ +K   N   VS+D
Sbjct: 1   MISPKSKSDFENDLEVSSQVASNISVHELSPDPSKDSTTPSSYLTDLVKHQENSVPVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           L+LHFN ++++  G+GETS E   H    T PR+FSCNYCRRKF+SSQALGGHQNAHKRE
Sbjct: 61  LSLHFNSSEIELKGTGETSIEVAAHTPATTIPRVFSCNYCRRKFYSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RTMAKRAMRM MFS+RYT+LASLPL+GSA+RSL I+AHAA+H  I+ +Q P + R G  F
Sbjct: 121 RTMAKRAMRMGMFSDRYTNLASLPLNGSAFRSLGIKAHAAMHQSIIQSQTPPVTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM-SCS 240
           ++GY GMP FMED+DV P+WPGSFRRV E   G+   E++Q P+        PP+  S +
Sbjct: 181 EQGYYGMPMFMEDDDVGPYWPGSFRRVGEAVGGNSGLELAQSPNMNFEARAPPPRTDSSA 240

Query: 241 PDLTLRL 246
           PDLTL+L
Sbjct: 241 PDLTLKL 247

BLAST of CmaCh04G000140 vs. TrEMBL
Match: A0A061E8M6_THECC (Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.1e-68
Identity = 146/251 (58.17%), Postives = 178/251 (70.92%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSST-SCLTNSIKGNTNQGLVSVD 60
           M  P   LE E DSE S++ AS+++  EATP+ SKDS++T SCLTN IK     G VS+D
Sbjct: 1   MTPPNPGLESENDSEASSQVASNISAQEATPDASKDSTTTASCLTNPIKAQPETGSVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           LTLHF   D    G+G+T SE   H    T PR+FSCNYCRRKF+SSQALGGHQNAHKRE
Sbjct: 61  LTLHFRATDAVMKGTGDTRSEIATHSLSATIPRVFSCNYCRRKFYSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RTMAKRAMRM +FS+RYTSLASLPLHGS +RSL I+AH+A+H  I+ +QRP   R G  F
Sbjct: 121 RTMAKRAMRMGIFSDRYTSLASLPLHGSTFRSLGIKAHSAMHQGIISSQRPIDTRAGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSM----APPKM 240
           D+GY GMP FMED+DV  FWPGSFR+VNE  +G++  E +   +  S        +PP+ 
Sbjct: 181 DQGYFGMPMFMEDDDVDLFWPGSFRQVNEGVSGNLALEFAPNSTQSSNMGFVAMASPPRT 240

Query: 241 -SCSPDLTLRL 246
            S SPDLTL+L
Sbjct: 241 DSSSPDLTLKL 251

BLAST of CmaCh04G000140 vs. TrEMBL
Match: V4UB17_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.8e-68
Identity = 146/248 (58.87%), Postives = 180/248 (72.58%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M  P  NLE E DSEVS+  AS+++  EA+P PSKD++S SCLTN IK N + G +S+DL
Sbjct: 1   MLPPNSNLELENDSEVSSHVASNISAKEASPGPSKDTNS-SCLTNVIKLNPDPGPLSLDL 60

Query: 61  TLHFNPNDVDA-NGSGETSSE-AVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKR 120
           TLHF  ND+D   G+GETS E A       T PR+FSCNYCRRKF+SSQALGGHQNAHKR
Sbjct: 61  TLHFKSNDIDRLKGTGETSGEVAAAQTPAATVPRVFSCNYCRRKFYSSQALGGHQNAHKR 120

Query: 121 ERTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVT 180
           ERTMAKRAMRM +FS+RYTSLASLPLHGSA+RSL I+AHAA+H  ++P QRP   R G  
Sbjct: 121 ERTMAKRAMRMGIFSDRYTSLASLPLHGSAFRSLGIKAHAAMHQGVVPPQRPPDMRGGAR 180

Query: 181 FDEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM-SC 240
           F++GY  MP FMED+D+  FWPGSFR+V+E   G+   + +Q  +        PP+  S 
Sbjct: 181 FEQGYFAMPMFMEDDDIDLFWPGSFRQVSEAVRGNPTLDFAQGSNGNFAAMPPPPRTDSS 240

Query: 241 SPDLTLRL 246
           +PDLTL+L
Sbjct: 241 APDLTLKL 247

BLAST of CmaCh04G000140 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 98/267 (36.70%), Postives = 138/267 (51.69%), Query Frame = 1

Query: 4   PKLNLEWEEDS-EVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDLTL 63
           P L+LE E  S   S++ AS+++       P   + S S   N+   N N  L S  LTL
Sbjct: 3   PILDLEIEASSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNN---NNNLDLESSSLTL 62

Query: 64  HFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTM 123
             +     +N   +   +         + R+FSCNYC+RKF+SSQALGGHQNAHKRERT+
Sbjct: 63  PLSSTSESSNPEQQQQQQP------SVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTL 122

Query: 124 AKRAMRMSM---FSNRYTS-----------LASLPLHGS------AYRSLEIEAHAAVHH 183
           AKRAMRM +   F  R +S           L+ LPLHGS      ++R+L I AH++ H 
Sbjct: 123 AKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAHD 182

Query: 184 KILPAQRP-FIARNGVTFDEGYIG--MPFFMEDEDVAPFWPGSFRR-VNERSTGSMPREV 243
             +  Q P  + RN   F++GY G  +PF++ED++    WPGSFR+  N  +  +    +
Sbjct: 183 VSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLWPGSFRQATNAVAVEAGNDNL 242

Query: 244 SQVPSPKSGTSMAPPKMSCSPDLTLRL 246
            +          A    S  PDLTL+L
Sbjct: 243 GERKMDFLDVKQAMDMESSLPDLTLKL 260

BLAST of CmaCh04G000140 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 112.5 bits (280), Expect = 3.8e-25
Identity = 94/234 (40.17%), Postives = 122/234 (52.14%), Query Frame = 1

Query: 34  SKDSSSTSCLTNSIKGNTNQGL-------VSVDLTLHFNPNDVDANGSGETSSEAVGHVS 93
           S D+S  +  +   + ++NQ L       VS+DL L    ND   + +  T  EA     
Sbjct: 4   SDDASRETPASRGGEASSNQDLSKPESNHVSLDLKL----NDTFNDDTKSTKCEA----- 63

Query: 94  GPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMS-MFSNR---YTSLASL 153
              NPR+FSCNYCRRKF+SSQALGGHQNAHKRERTMAKRAM M  MF +    YT  +S 
Sbjct: 64  ---NPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHHRPYTYTSS- 123

Query: 154 PLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFDEGYIG--MPFFMEDEDVAP--F 213
                   SL ++AH+ + H  L   +P ++R      +GY G  +P F + +D     F
Sbjct: 124 --------SLGMQAHSGLLHHTLSQPQPLVSR---FHHQGYFGNTVPLFFDYDDGGSDFF 183

Query: 214 WPGSFRRVNERSTGSMPREVSQVPSPKSGTSM-------APPKMSCSPDLTLRL 246
           WPGSFR+V E +       V  V S +SG  +            S  PDLTLRL
Sbjct: 184 WPGSFRQVVEEAEA----PVVVVASTESGLDLNSVAANGGVDNNSSKPDLTLRL 209

BLAST of CmaCh04G000140 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-18
Identity = 53/109 (48.62%), Postives = 70/109 (64.22%), Query Frame = 1

Query: 74  SGETSSEAVGHVSGP----TNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAM-- 133
           S +TSS +  H         +PR+FSCNYC+RKF+SSQALGGHQNAHKRERT+AKR    
Sbjct: 44  SFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYY 103

Query: 134 RMSMFS-------------NRYTSLASLPLHGSAYR--SLEIEAHAAVH 162
           +M++ S             +R+ S+ASLPLHGS     +L I+AH+ +H
Sbjct: 104 KMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIH 152

BLAST of CmaCh04G000140 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-17
Identity = 49/116 (42.24%), Postives = 72/116 (62.07%), Query Frame = 1

Query: 52  NQGLVSVDLTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGG 111
           NQ +   +  +H + ++++     + ++  V   +  T  ++FSCNYC+R F+SSQALGG
Sbjct: 19  NQSIEDEERDVHNSSHELNLIDCIDDTTSIVNESTTSTEQKLFSCNYCQRTFYSSQALGG 78

Query: 112 HQNAHKRERTMAKRAMRM----SMFSNRYTSLASLPLHG--SAYRSLEIEAHAAVH 162
           HQNAHKRERT+AKR  RM    S F + Y   + LP HG  + +RSL I+AH+  H
Sbjct: 79  HQNAHKRERTLAKRGQRMAASASAFGHPY-GFSPLPFHGQYNNHRSLGIQAHSISH 133

BLAST of CmaCh04G000140 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 1

Query: 86  SGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRM---SMFSNRYTSLASL 145
           S  T  ++FSCNYC+R F+SSQALGGHQNAHKRERT+AKR  RM   + F + Y   A +
Sbjct: 96  STSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPY-GFAPV 155

Query: 146 PLHGS-AYRSLEIEAHAAVH 162
           P HG  + R+L I+AH+  H
Sbjct: 156 PFHGQYSNRTLGIQAHSMSH 174

BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|659114013|ref|XP_008456866.1| (PREDICTED: zinc finger protein 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88
Identity = 172/245 (70.20%), Postives = 195/245 (79.59%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S +A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 46  MGSPMFNLECEKDSEMSGKAFSDTA---------KDSGTTSCLTNSIKANPDQGLVSLDL 105

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN N++D+ GSGETSS+ V H+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 106 TLHFNSNNIDSKGSGETSSDVVAHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 165

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 166 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 225

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMSCSPD 240
           +GYIG+P+F+E++DV PFWPGSFRRVN    GS P+E S+ PSP S   M P   S SPD
Sbjct: 226 QGYIGVPYFVEEDDVGPFWPGSFRRVNGEFIGSKPQEESETPSPNSDMRMPPSTTSTSPD 281

Query: 241 LTLRL 246
           LTLRL
Sbjct: 286 LTLRL 281

BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|659114015|ref|XP_008456867.1| (PREDICTED: zinc finger protein 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 1.3e-88
Identity = 172/245 (70.20%), Postives = 195/245 (79.59%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S +A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 1   MGSPMFNLECEKDSEMSGKAFSDTA---------KDSGTTSCLTNSIKANPDQGLVSLDL 60

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN N++D+ GSGETSS+ V H+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 61  TLHFNSNNIDSKGSGETSSDVVAHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 120

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 121 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 180

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMSCSPD 240
           +GYIG+P+F+E++DV PFWPGSFRRVN    GS P+E S+ PSP S   M P   S SPD
Sbjct: 181 QGYIGVPYFVEEDDVGPFWPGSFRRVNGEFIGSKPQEESETPSPNSDMRMPPSTTSTSPD 236

Query: 241 LTLRL 246
           LTLRL
Sbjct: 241 LTLRL 236

BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|449445314|ref|XP_004140418.1| (PREDICTED: zinc finger protein 4-like [Cucumis sativus])

HSP 1 Score: 332.8 bits (852), Expect = 5.1e-88
Identity = 175/246 (71.14%), Postives = 196/246 (79.67%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTSCLTNSIKGNTNQGLVSVDL 60
           M SP  NLE E+DSE+S++A SD A         KDS +TSCLTNSIK N +QGLVS+DL
Sbjct: 1   MGSPMFNLECEKDSEMSSKAFSDTA---------KDSGTTSCLTNSIKANHDQGLVSLDL 60

Query: 61  TLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRER 120
           TLHFN ND+DA GSGETSS+ VGH+SGPT+ R+FSCNYC+RKFFSSQALGGHQNAHKRER
Sbjct: 61  TLHFNSNDIDAKGSGETSSDVVGHISGPTSLRIFSCNYCQRKFFSSQALGGHQNAHKRER 120

Query: 121 TMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTFD 180
           TMAKRAMRM MFSNRYTSLASLPLHGSAYRSL IEAHAAVH KILP +RPF AR G   D
Sbjct: 121 TMAKRAMRMGMFSNRYTSLASLPLHGSAYRSLGIEAHAAVHRKILPGERPFSARPGAMID 180

Query: 181 EGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKMS-CSP 240
           +GYIGM +F+E++DV PFWPGSFRRVN     S  RE S++PS  S T MAP   S  SP
Sbjct: 181 QGYIGMQYFVEEDDVGPFWPGSFRRVNGEFIDSTAREASEIPSLNSDTRMAPSTTSTSSP 237

Query: 241 DLTLRL 246
           DLTLRL
Sbjct: 241 DLTLRL 237

BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|225424442|ref|XP_002285121.1| (PREDICTED: zinc finger protein 4-like [Vitis vinifera])

HSP 1 Score: 271.2 bits (692), Expect = 1.8e-69
Identity = 145/248 (58.47%), Postives = 189/248 (76.21%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSSTS-CLTNSIKGNTNQGLVSVD 60
           M+ P  N+E E++SEVS++ AS++++ E + +PSKDS++TS CLTN IK   +QG VS+D
Sbjct: 1   MEPPNYNVESEDESEVSSQVASNVSIQETSSDPSKDSTTTSSCLTNLIKLQPDQGSVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           LTL FNPND    G GE+SS+AV      T P++FSCNYCRRKFFSSQALGGHQNAHKRE
Sbjct: 61  LTLCFNPNDTKLKGMGESSSDAVAQAPVATAPKVFSCNYCRRKFFSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RT+AKRAMRM MF++RYTSL+SLPLHGSA+RSL IEAH+++H +++P +RP   R G  F
Sbjct: 121 RTLAKRAMRMGMFADRYTSLSSLPLHGSAFRSLGIEAHSSLHQRMVPLERP-DTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM--SC 240
           ++GY G+P F+EDE+   FWPGSFR++ ER  GS   E++Q P+  +   MAPP    S 
Sbjct: 181 EQGYYGLPVFIEDEEAELFWPGSFRQIGERVGGSAIPELAQGPN-INFVPMAPPPTTDSS 240

Query: 241 SPDLTLRL 246
           SPDLTL+L
Sbjct: 241 SPDLTLKL 246

BLAST of CmaCh04G000140 vs. NCBI nr
Match: gi|224099591|ref|XP_002311543.1| (hypothetical protein POPTR_0008s13730g [Populus trichocarpa])

HSP 1 Score: 270.4 bits (690), Expect = 3.1e-69
Identity = 141/247 (57.09%), Postives = 184/247 (74.49%), Query Frame = 1

Query: 1   MQSPKLNLEWEEDSEVSTRAASDMAVPEATPNPSKDSSS-TSCLTNSIKGNTNQGLVSVD 60
           M SPK   ++E D EVS++ AS+++V E +P+PSKDS++ +S LT+ +K   N   VS+D
Sbjct: 1   MISPKSKSDFENDLEVSSQVASNISVHELSPDPSKDSTTPSSYLTDLVKHQENSVPVSLD 60

Query: 61  LTLHFNPNDVDANGSGETSSEAVGHVSGPTNPRMFSCNYCRRKFFSSQALGGHQNAHKRE 120
           L+LHFN ++++  G+GETS E   H    T PR+FSCNYCRRKF+SSQALGGHQNAHKRE
Sbjct: 61  LSLHFNSSEIELKGTGETSIEVAAHTPATTIPRVFSCNYCRRKFYSSQALGGHQNAHKRE 120

Query: 121 RTMAKRAMRMSMFSNRYTSLASLPLHGSAYRSLEIEAHAAVHHKILPAQRPFIARNGVTF 180
           RTMAKRAMRM MFS+RYT+LASLPL+GSA+RSL I+AHAA+H  I+ +Q P + R G  F
Sbjct: 121 RTMAKRAMRMGMFSDRYTNLASLPLNGSAFRSLGIKAHAAMHQSIIQSQTPPVTRGGARF 180

Query: 181 DEGYIGMPFFMEDEDVAPFWPGSFRRVNERSTGSMPREVSQVPSPKSGTSMAPPKM-SCS 240
           ++GY GMP FMED+DV P+WPGSFRRV E   G+   E++Q P+        PP+  S +
Sbjct: 181 EQGYYGMPMFMEDDDVGPYWPGSFRRVGEAVGGNSGLELAQSPNMNFEARAPPPRTDSSA 240

Query: 241 PDLTLRL 246
           PDLTL+L
Sbjct: 241 PDLTLKL 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ZFP4_ARATH1.9e-2636.70Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
ZFP7_ARATH6.7e-2440.17Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP1_ARATH4.7e-1748.62Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP3_ARATH6.8e-1642.24Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
ZFP2_ARATH2.0e-1246.07Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KMD6_CUCSA3.5e-8871.14Uncharacterized protein OS=Cucumis sativus GN=Csa_5G255670 PE=4 SV=1[more]
F6HFB1_VITVI1.3e-6958.47Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06200 PE=4 SV=... [more]
B9HJJ4_POPTR2.2e-6957.09Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s13730g PE=4 SV=1[more]
A0A061E8M6_THECC1.1e-6858.17Zinc finger protein 4 OS=Theobroma cacao GN=TCM_011244 PE=4 SV=1[more]
V4UB17_9ROSI1.8e-6858.87Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016402mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G66140.11.1e-2736.70 zinc finger protein 4[more]
AT1G24625.13.8e-2540.17 zinc finger protein 7[more]
AT1G80730.12.6e-1848.62 zinc-finger protein 1[more]
AT5G25160.13.8e-1742.24 zinc finger protein 3[more]
AT5G10970.11.2e-1555.00 C2H2 and C2HC zinc fingers superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659114013|ref|XP_008456866.1|1.3e-8870.20PREDICTED: zinc finger protein 4-like isoform X1 [Cucumis melo][more]
gi|659114015|ref|XP_008456867.1|1.3e-8870.20PREDICTED: zinc finger protein 4-like isoform X2 [Cucumis melo][more]
gi|449445314|ref|XP_004140418.1|5.1e-8871.14PREDICTED: zinc finger protein 4-like [Cucumis sativus][more]
gi|225424442|ref|XP_002285121.1|1.8e-6958.47PREDICTED: zinc finger protein 4-like [Vitis vinifera][more]
gi|224099591|ref|XP_002311543.1|3.1e-6957.09hypothetical protein POPTR_0008s13730g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G000140.1CmaCh04G000140.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 96..116
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 94..121
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 89..122
score: 9.9

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh04G000140Cucumber (Gy14) v2cgybcmaB664
CmaCh04G000140Silver-seed gourdcarcmaB0949
CmaCh04G000140Cucumber (Chinese Long) v3cmacucB0876
CmaCh04G000140Wax gourdcmawgoB0899
CmaCh04G000140Cucurbita maxima (Rimu)cmacmaB531
CmaCh04G000140Cucurbita moschata (Rifu)cmacmoB730
CmaCh04G000140Wild cucumber (PI 183967)cmacpiB751
CmaCh04G000140Wild cucumber (PI 183967)cmacpiB772
CmaCh04G000140Watermelon (97103) v1cmawmB743
CmaCh04G000140Cucurbita pepo (Zucchini)cmacpeB722