CmaCh04G000110 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAACAATGTGTTTTGAAAAGGCTGAAGATGCTTATTGGGAAAGAAGATCCAAGGCCTCTGGTCTTAGAGCTTTTGCAGAACAGATCCACAATGCAAAGCCTGTGGAAGCAAAGGCAATCCTTAGAGAAGCAGCTGAAATATTTGAAGCAATTGGGAAGGCTGATACTGCTGCCCAATGCTTTTTCGATATAGGGGAGTTTGAAAGGGGAGGTAAGTACAATTCCTTGTTTTCTTTGTTTCCTGTATTGGGTTTAAACCTGTTTGTTTGATGTCCTTCCAAGTTTCATCTACTCCTGTAATACGAGCAAAGCAGAGTGTTTATTGCTTTTTTTCTCCTTGCTGGAGATGTTGGTCAGAATATTTGGTTTTAGAATTCAATCTTTGATGATGTCCTTTCCCTTTCCCCCTATGTTTTCGTAATGATTGTTTTAGGGATATAAGTAGTAATTAGAACGTTGTGAAATGTGATTCCTGCAGGGGCAATTTTTGAGGAGAAATGTGGGCAGCTAGAGAGCAGGAGAGTGTTTTCTTCTAGCAAAGTGCTACAACCGTGCTGCTGATTTATTTGCCAGGGCAAATTGTTGTTCTGCGTGCTTGAATACTTGCTCTAAAGGAAAATTGTTTGACGTTGGTTTGCATTACATTTTATCCTGGAAACAAGATGCCGGACTCGAACACCATGCATCCAGAAGTAAGGAAATAGAGGACCTTGAACAAGAATTCGTACAAAAATGTGCTCTTCATTTTCACAACTGCGGGGACAGTAGATCCATGATGAAATCTGTTAAAAGTTTTCGATCCGTAGATTTGATGCGTAACTTCTTGAAGTCCTTGAATTGCCTCGATGAGCTTCTTGTGTTGGAAGAAGAGCTGGGAAATTTTTTGGAAGCTGTAAAGATTGCAGAGTCAAAAGCTGATCTGGTTCATGTGGCTGATCTTCATGGCAAGGCAGGAAATTTTAGTGAGGCATCCACGCTTCTTGTACGCTACGTCCTTGCCAACTCTCTTTGGTCACCAGGAAGCAAAGGATGGCCCTTGAAAAATTTTGAAGGAAAGAAGGATCTTTTGAAAAAGGCCAGGTTTTTAGCGGAAAATGACTCTAACGAATTATACGACTGCATTTGTATAGAGGCTGATATTTTGTCTGATGAAAATGGAAACATGGGAGCTCTGACAGGATGTCTAACTGCTTCTAGGAACCACGACAGTGTTCGTGGAGAAATGATATGTGTTAGAAAGATTCTGGATGCCCATATGCATTTGAACAAATCAAAATACACTTGGGAAGGTGAATTGGTTTCTGATCTGACCAAGCATCCAGAAGAAATGGTTTCAAAGAATCAGGTGTCCGTTGAAACTTTGGTTTACTTTTGGCATTGCTGGAAGGATAGAATTTTGAATGTTCTCGAGAGTCTTAGGTGTGTTGGTGTGAATGATGCGGACCCTTACGGCGAGTTCTGTTTAAATTTCTTTGGTGTTTGGAGACTGAACAACAGACACGTATTGCTCAACTCTGATGCTGATTGGGCCAAAAAAGTTGATGAAAGGTTCGTTCATAGGAACGGTAAATCGGTGTCCATTGATGTTACCCAATTTTCATCATCTGCCAGGAACTATTGGAGCTTAGAACTGTTTTCTTCTGGACTCGAGGTTTTAGAAAATCTAGATCACCTTTATAAATTCTCCAACCGTATCGGTTTCTTGACATTCAGCCGGTGTAGGCTTCTCACTCACATGTTTGAGGTTGCAAAACTCCTTCTAGATAGCCCATATTTGGAACATAGATACCATGATAAACAGAAGTTAGAGAGATTCTGTAAGTGGCAATATCGGAAATCCAAAGTCATTTATTTCCACCAGATTGTGTAG ATGGAAACAATGTGTTTTGAAAAGGCTGAAGATGCTTATTGGGAAAGAAGATCCAAGGCCTCTGGTCTTAGAGCTTTTGCAGAACAGATCCACAATGCAAAGCCTGTGGAAGCAAAGGCAATCCTTAGAGAAGCAGCTGAAATATTTGAAGCAATTGGGAAGGCTGATACTGCTGCCCAATGCTTTTTCGATATAGGGGAGTTTGAAAGGGGAGATGCCGGACTCGAACACCATGCATCCAGAAGTAAGGAAATAGAGGACCTTGAACAAGAATTCGTACAAAAATGTGCTCTTCATTTTCACAACTGCGGGGACAGTAGATCCATGATGAAATCTGTTAAAAGTTTTCGATCCGTAGATTTGATGCGTAACTTCTTGAAGTCCTTGAATTGCCTCGATGAGCTTCTTGTGTTGGAAGAAGAGCTGGGAAATTTTTTGGAAGCTGTAAAGATTGCAGAGTCAAAAGCTGATCTGGTTCATGTGGCTGATCTTCATGGCAAGGCAGGAAATTTTAGTGAGGCATCCACGCTTCTTGTACGCTACGTCCTTGCCAACTCTCTTTGGTCACCAGGAAGCAAAGGATGGCCCTTGAAAAATTTTGAAGGAAAGAAGGATCTTTTGAAAAAGGCCAGGTTTTTAGCGGAAAATGACTCTAACGAATTATACGACTGCATTTGTATAGAGGCTGATATTTTGTCTGATGAAAATGGAAACATGGGAGCTCTGACAGGATGTCTAACTGCTTCTAGGAACCACGACAGTGTTCGTGGAGAAATGATATGTGTTAGAAAGATTCTGGATGCCCATATGCATTTGAACAAATCAAAATACACTTGGGAAGGTGAATTGGTTTCTGATCTGACCAAGCATCCAGAAGAAATGGTTTCAAAGAATCAGGTGTCCGTTGAAACTTTGGTTTACTTTTGGCATTGCTGGAAGGATAGAATTTTGAATGTTCTCGAGAGTCTTAGGTGTGTTGGTGTGAATGATGCGGACCCTTACGGCGAGTTCTGTTTAAATTTCTTTGGTGTTTGGAGACTGAACAACAGACACGTATTGCTCAACTCTGATGCTGATTGGGCCAAAAAAGTTGATGAAAGGTTCGTTCATAGGAACGGTAAATCGGTGTCCATTGATGTTACCCAATTTTCATCATCTGCCAGGAACTATTGGAGCTTAGAACTGTTTTCTTCTGGACTCGAGGTTTTAGAAAATCTAGATCACCTTTATAAATTCTCCAACCGTATCGGTTTCTTGACATTCAGCCGGTGTAGGCTTCTCACTCACATGTTTGAGGTTGCAAAACTCCTTCTAGATAGCCCATATTTGGAACATAGATACCATGATAAACAGAAGTTAGAGAGATTCTGTAAGTGGCAATATCGGAAATCCAAAGTCATTTATTTCCACCAGATTGTGTAG ATGGAAACAATGTGTTTTGAAAAGGCTGAAGATGCTTATTGGGAAAGAAGATCCAAGGCCTCTGGTCTTAGAGCTTTTGCAGAACAGATCCACAATGCAAAGCCTGTGGAAGCAAAGGCAATCCTTAGAGAAGCAGCTGAAATATTTGAAGCAATTGGGAAGGCTGATACTGCTGCCCAATGCTTTTTCGATATAGGGGAGTTTGAAAGGGGAGATGCCGGACTCGAACACCATGCATCCAGAAGTAAGGAAATAGAGGACCTTGAACAAGAATTCGTACAAAAATGTGCTCTTCATTTTCACAACTGCGGGGACAGTAGATCCATGATGAAATCTGTTAAAAGTTTTCGATCCGTAGATTTGATGCGTAACTTCTTGAAGTCCTTGAATTGCCTCGATGAGCTTCTTGTGTTGGAAGAAGAGCTGGGAAATTTTTTGGAAGCTGTAAAGATTGCAGAGTCAAAAGCTGATCTGGTTCATGTGGCTGATCTTCATGGCAAGGCAGGAAATTTTAGTGAGGCATCCACGCTTCTTGTACGCTACGTCCTTGCCAACTCTCTTTGGTCACCAGGAAGCAAAGGATGGCCCTTGAAAAATTTTGAAGGAAAGAAGGATCTTTTGAAAAAGGCCAGGTTTTTAGCGGAAAATGACTCTAACGAATTATACGACTGCATTTGTATAGAGGCTGATATTTTGTCTGATGAAAATGGAAACATGGGAGCTCTGACAGGATGTCTAACTGCTTCTAGGAACCACGACAGTGTTCGTGGAGAAATGATATGTGTTAGAAAGATTCTGGATGCCCATATGCATTTGAACAAATCAAAATACACTTGGGAAGGTGAATTGGTTTCTGATCTGACCAAGCATCCAGAAGAAATGGTTTCAAAGAATCAGGTGTCCGTTGAAACTTTGGTTTACTTTTGGCATTGCTGGAAGGATAGAATTTTGAATGTTCTCGAGAGTCTTAGGTGTGTTGGTGTGAATGATGCGGACCCTTACGGCGAGTTCTGTTTAAATTTCTTTGGTGTTTGGAGACTGAACAACAGACACGTATTGCTCAACTCTGATGCTGATTGGGCCAAAAAAGTTGATGAAAGGTTCGTTCATAGGAACGGTAAATCGGTGTCCATTGATGTTACCCAATTTTCATCATCTGCCAGGAACTATTGGAGCTTAGAACTGTTTTCTTCTGGACTCGAGGTTTTAGAAAATCTAGATCACCTTTATAAATTCTCCAACCGTATCGGTTTCTTGACATTCAGCCGGTGTAGGCTTCTCACTCACATGTTTGAGGTTGCAAAACTCCTTCTAGATAGCCCATATTTGGAACATAGATACCATGATAAACAGAAGTTAGAGAGATTCTGTAAGTGGCAATATCGGAAATCCAAAGTCATTTATTTCCACCAGATTGTGTAG METMCFEKAEDAYWERRSKASGLRAFAEQIHNAKPVEAKAILREAAEIFEAIGKADTAAQCFFDIGEFERGDAGLEHHASRSKEIEDLEQEFVQKCALHFHNCGDSRSMMKSVKSFRSVDLMRNFLKSLNCLDELLVLEEELGNFLEAVKIAESKADLVHVADLHGKAGNFSEASTLLVRYVLANSLWSPGSKGWPLKNFEGKKDLLKKARFLAENDSNELYDCICIEADILSDENGNMGALTGCLTASRNHDSVRGEMICVRKILDAHMHLNKSKYTWEGELVSDLTKHPEEMVSKNQVSVETLVYFWHCWKDRILNVLESLRCVGVNDADPYGEFCLNFFGVWRLNNRHVLLNSDADWAKKVDERFVHRNGKSVSIDVTQFSSSARNYWSLELFSSGLEVLENLDHLYKFSNRIGFLTFSRCRLLTHMFEVAKLLLDSPYLEHRYHDKQKLERFCKWQYRKSKVIYFHQIV
BLAST of CmaCh04G000110 vs. TrEMBL
Match: A0A0A0KMH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G266320 PE=4 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 1.7e-155 Identity = 290/442 (65.61%), Postives = 339/442 (76.70%), Query Frame = 1
BLAST of CmaCh04G000110 vs. TrEMBL
Match: F6HG18_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01850 PE=4 SV=1) HSP 1 Score: 430.3 bits (1105), Expect = 3.1e-117 Identity = 234/505 (46.34%), Postives = 317/505 (62.77%), Query Frame = 1
BLAST of CmaCh04G000110 vs. TrEMBL
Match: A0A067F3N9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000038mg PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 6.3e-110 Identity = 208/386 (53.89%), Postives = 266/386 (68.91%), Query Frame = 1
BLAST of CmaCh04G000110 vs. TrEMBL
Match: A0A067F2V7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000038mg PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 6.3e-110 Identity = 208/386 (53.89%), Postives = 266/386 (68.91%), Query Frame = 1
BLAST of CmaCh04G000110 vs. TrEMBL
Match: V4SAE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004116mg PE=4 SV=1) HSP 1 Score: 404.1 bits (1037), Expect = 2.4e-109 Identity = 207/386 (53.63%), Postives = 266/386 (68.91%), Query Frame = 1
BLAST of CmaCh04G000110 vs. NCBI nr
Match: gi|659120507|ref|XP_008460225.1| (PREDICTED: uncharacterized protein LOC103499108 [Cucumis melo]) HSP 1 Score: 581.6 bits (1498), Expect = 1.2e-162 Identity = 313/522 (59.96%), Postives = 368/522 (70.50%), Query Frame = 1
BLAST of CmaCh04G000110 vs. NCBI nr
Match: gi|778701798|ref|XP_011655089.1| (PREDICTED: uncharacterized protein LOC105435477 [Cucumis sativus]) HSP 1 Score: 557.4 bits (1435), Expect = 2.4e-155 Identity = 290/442 (65.61%), Postives = 339/442 (76.70%), Query Frame = 1
BLAST of CmaCh04G000110 vs. NCBI nr
Match: gi|700195626|gb|KGN50803.1| (hypothetical protein Csa_5G266320 [Cucumis sativus]) HSP 1 Score: 557.4 bits (1435), Expect = 2.4e-155 Identity = 290/442 (65.61%), Postives = 339/442 (76.70%), Query Frame = 1
BLAST of CmaCh04G000110 vs. NCBI nr
Match: gi|641838880|gb|KDO57817.1| (hypothetical protein CISIN_1g000038mg [Citrus sinensis]) HSP 1 Score: 406.0 bits (1042), Expect = 9.1e-110 Identity = 208/386 (53.89%), Postives = 266/386 (68.91%), Query Frame = 1
BLAST of CmaCh04G000110 vs. NCBI nr
Match: gi|641838879|gb|KDO57816.1| (hypothetical protein CISIN_1g000038mg [Citrus sinensis]) HSP 1 Score: 406.0 bits (1042), Expect = 9.1e-110 Identity = 208/386 (53.89%), Postives = 266/386 (68.91%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|