CmaCh03G013330 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G013330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RAC-like GTP binding protein 5
Location	Cma_Chr03 : 8570189 .. 8573100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATAAAAAAGAAAAGGATTTTTACAGTGCGAGAGATAAAGTCGCGCGATCTGAGAAAAACCCTCTTTCTGTGTGTGTCTCTCTCTCCCTCTGAATCTCCACGGCTCTGTACCTGAGAGGTCTTCAGCAAAATGTCTGCGTACAGAGCTGAAGACGACTACGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCCAAGTCTACTATTGGGGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGATACCGCTGGCCAAGAACGGTGATTCTGCCCCCTCCTTGCCTTTATTTGCTTTCTATGTTACTGGTTTTACATTTTATGATCTGGGTCCTTGTCGTTTTAGGTGGAAATATTGTGCGACATACTGGGCTCTGCTCTTGTTTTATTGTTTTTTCTTTCTTGTGTTGCTTCTACTGATATTGAAATGTGCCTTCCCCTAATATAATTGTTTTTTTTAGCTTCGATTAGTGGTATTTATTATGTTTGTTTGGTTCCATAGGTTAGTTGTTGATTGAAATGGGGTACCAGACGGGTTTGGTGGATCTAAAAAAGAGGCTTGTTTGAACTTGTTGAGGATTGTTGATGGGGAGTTCACATCGGGTAGGATACATTTCTATTTGTATTAGGCCTTTTCGGGAAACCAAAAGCAAGGCGATTAGAGTTTATGCTCGAAGTGGACAATATCATACTATTGTAGAGGTTCGTGATTCCTAACAGAACTTAGGTTACTTATATCTAACCGGATACTTGGTCATCGTGCTAGATGCTACCTTGTCCATAAAAAAGCACAGAGAAAGGAACAAGAGAGATAGCAAATCAAGCCTTTCAATCATATTTTCAATATGGAAAGCCTTTTGATAACTCCAAATGCAATTTTGGTTTGGTAATTTATATGCTAGAAACATGTCTTTATGACTTAAAGCAGGAGCCCTTTTCTCTTAACTTGTAACTCAGGCACGATACGAATTGCGCAAGCAAATGCACCCAATGTTCTTGAGTATGTTAGAAGATTCATTAGCTGTAATGTGAATTTTCAAAAAGCTTACTGTTTCTTTACTTTTCTCTTCCAAGTAGTTGTCTTTCCATTCTTAGCAATTGTGTTAGGCTCTTCCGCCTCTATTATGTAAGTGGTTGAGTGTTGGTTTATAAGTGCCGAGAAAAGTTTACCTCTTCCATTAGTGTTTGGGGTTGAGTGTGAGATCCCACATCGGTTGGGGAGGTTTATAAGGGTGTAAAAACCTCTTCCTAGCAGACGCGTTTTAAAAACCTTGAGGGGAAGCTTGAAAAGAAAGCTCTAAGAAGATAAAATCCGCTAGCGGTAGGCTTGGGCTGTTACATTAAGAGAGCAAATGAATATCAATTACTAGTATACCAAAGTCAGGTTACAGTAGATCCGTTTAACTGATTTTGAGAGGTCATGTCTGTGTGAAGATCTATTTCACAGTTCGATGCATATTCCATGTTGATGTAGAGATGGTTGACATGGAGGGTTAATTTTTAAAGCCTATGAGACTATTTCTATGAGAGCCCACATCGGTTAGAGACGGGAACGAAGCATTCCTTGTAAGGGTATATAGAAGCCTAACTTTGAAGGGAAGTTGGAAGGAAAAGCTAAAAAATGACAATATTTGCTAGCGGTGGACTTAGACTGTTACAGTTTCACCTCTTTTACTAGTTTTTTTGAGGTGGACAGAACCCATTAATGCTAGTATCCTGGATGTTCTGCAGCTATAAGATTTATGTTTAGTGTCTTGTTTATCTGGAAAAAGTGGCCCAATTCTGTTTTCAACGAGTGAGGTATGGTCATAAGATAGTTTGGACTGAACGATCTTTTTCTGTACTGAAAAATGGGAGGTTTACCTGTATGACAGACTTTAGACTTAGTTTCATCTTAAAATCTGCACTTGCTTTACTTTGCCACATCTCTCGTCTCTGTCCCCTTAACTCCTCAAGTTCACAGGTATAGAGCGATTACGAGTGCTTACTATCGAGGAGCTGTTGGTGCCCTGATTGTGTACGACGTTACACGACATTCCACATATGAAAATGTTGAGAAATGGTTAAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAATAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTCTCAACTGAGGATGCAAAATCATTTGCTGAGACAGAGTCCCTCTACTTCATGGAAACCTCTGCTCTTGAAGCCATGAACGTGGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGATGCTAGCGACGACGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCCGAGGTCAAGAAAGGCGGTTGCTGTTCCAGCTAAACTACCAATCTGAAGTTGCTGCAGCAGTCAGCCGGTTGTCTGGTCGATCGACATCTATTTTAAGTTCTGTGTTACATATAGCAAGTACACCGTGATGTGAAATTTTTTCCAGGGATGCATAGAGTAGTAGGGGGATTCATGGGGATTGATTTGATGTATCTTCACTGTGTTAACCACTGATACGTTGACTTCTGATGCCAAAAATACCGATGATTAAGCTGGTAGATTTGTGAGTTGGGAATTACAGTTTTTACTCATTTGACTTTGAGGGGGTTTGTTTCCAAGCAGTGAATTGTGAATTGTTATCAAGACCAAGATTTGTTTAATCTGTTTGCATGAACTATAACAGTCAACCCCTCGTGGGAGTGTTGTCAACGTCCCTCGTTAACACTCCTTGTTAGACATTATTATTCTTTGACCCATTAT

mRNA sequence

GATAAAAAAGAAAAGGATTTTTACAGTGCGAGAGATAAAGTCGCGCGATCTGAGAAAAACCCTCTTTCTGTGTGTGTCTCTCTCTCCCTCTGAATCTCCACGGCTCTGTACCTGAGAGGTCTTCAGCAAAATGTCTGCGTACAGAGCTGAAGACGACTACGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCCAAGTCTACTATTGGGGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGATACCGCTGGCCAAGAACGGTATAGAGCGATTACGAGTGCTTACTATCGAGGAGCTGTTGGTGCCCTGATTGTGTACGACGTTACACGACATTCCACATATGAAAATGTTGAGAAATGGTTAAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAATAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTCTCAACTGAGGATGCAAAATCATTTGCTGAGACAGAGTCCCTCTACTTCATGGAAACCTCTGCTCTTGAAGCCATGAACGTGGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGATGCTAGCGACGACGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCCGAGGTCAAGAAAGGCGGTTGCTGTTCCAGCTAAACTACCAATCTGAAGTTGCTGCAGCAGTCAGCCGGTTGTCTGGTCGATCGACATCTATTTTAAGTTCTGTGTTACATATAGCAAGTACACCGTGATGTGAAATTTTTTCCAGGGATGCATAGAGTAGTAGGGGGATTCATGGGGATTGATTTGATGTATCTTCACTGTGTTAACCACTGATACGTTGACTTCTGATGCCAAAAATACCGATGATTAAGCTGGTAGATTTGTGAGTTGGGAATTACAGTTTTTACTCATTTGACTTTGAGGGGGTTTGTTTCCAAGCAGTGAATTGTGAATTGTTATCAAGACCAAGATTTGTTTAATCTGTTTGCATGAACTATAACAGTCAACCCCTCGTGGGAGTGTTGTCAACGTCCCTCGTTAACACTCCTTGTTAGACATTATTATTCTTTGACCCATTAT

Coding sequence (CDS)

ATGTCTGCGTACAGAGCTGAAGACGACTACGACTATCTCTTCAAGGTCGTCTTAATCGGAGATTCTGGCGTTGGCAAGTCCAATTTGCTTTCCCGCTTTACCAAAAACGAGTTCAGCCTCGAATCCAAGTCTACTATTGGGGTTGAGTTTGCTACTCGTAGTTTGAATCTTGATGGCAAGGTTATTAAGGCTCAGATTTGGGATACCGCTGGCCAAGAACGGTATAGAGCGATTACGAGTGCTTACTATCGAGGAGCTGTTGGTGCCCTGATTGTGTACGACGTTACACGACATTCCACATATGAAAATGTTGAGAAATGGTTAAAGGAGTTGAGAGATCATACAGATCCCAACATTGTAATAATGCTAGTTGGCAACAAATCAGATCTTCGCCACCTTGTGGCAGTCTCAACTGAGGATGCAAAATCATTTGCTGAGACAGAGTCCCTCTACTTCATGGAAACCTCTGCTCTTGAAGCCATGAACGTGGACAACGCCTTTGCTGAAGTGCTTACACAAATTTACCACATAGTGAGCAAGAAGGCTATGGATGCTAGCGACGACGCTGCTGCATCAGCCGTTCTAGCGAAAGGGGAGAAAATTGATATCAGTAAGGACGTCTCCGAGGTCAAGAAAGGCGGTTGCTGTTCCAGCTAA

Protein sequence

MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIVIMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSKKAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS

Homology

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BLAST of CmaCh03G013330 vs. Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=2 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 4.6e-101
Identity = 188/218 (86.24%), Postives = 205/218 (94.04%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A+ ++A   V +KG+KIDI KDVS VKKGGCCS+
Sbjct: 181 KAMEAASESA--NVPSKGDKIDIGKDVSAVKKGGCCSN 216

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BLAST of CmaCh03G013330 vs. Swiss-Prot
Match: RAA1D_ARATH (Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98
Identity = 183/218 (83.94%), Postives = 203/218 (93.12%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+ NV+NAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A +D  +  V +KGEKID+  DVS VKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

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BLAST of CmaCh03G013330 vs. Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2)

HSP 1 Score: 359.0 bits (920), Expect = 3.7e-98
Identity = 180/216 (83.33%), Postives = 199/216 (92.13%), Query Frame = 1


Query: 2   SAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKV 61
           + YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSL +DGKV
Sbjct: 3   AGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKV 62

Query: 62  IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIVI 121
           +KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WLKELRDHTDPNIV+
Sbjct: 63  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVV 122

Query: 122 MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSKK 181
           MLVGNKSDLRHLVAV T++ K+FAE ESLYFMETSALE+ NV+NAFAEVLTQIY IVSK+
Sbjct: 123 MLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKR 182

Query: 182 AMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCS 218
           +++A DDA +     KGEKI+I  DVS VKKGGCCS
Sbjct: 183 SVEAGDDAGSGP--GKGEKINIKDDVSAVKKGGCCS 216

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BLAST of CmaCh03G013330 vs. Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 4.2e-94
Identity = 173/218 (79.36%), Postives = 193/218 (88.53%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFK+VLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFAT+SLN+D K
Sbjct: 1   MAGYRADDEYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH TYENV +WLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAVST++AK  AE E LYFMETSALEA NV+NAF E LTQIY IVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KA++A D+ A S+   KGE I+I  + S  KK GCCSS
Sbjct: 181 KAVEAGDEGATSSAPPKGETINIKDEGSSWKKFGCCSS 218

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BLAST of CmaCh03G013330 vs. Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.0e-92
Identity = 171/218 (78.44%), Postives = 196/218 (89.91%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +T+ENV++WLKEL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEA NV++AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           K ++A +D  AS  + KGEKI++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNAS--VPKGEKIEVKNDVSALKKLGCCSN 216

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BLAST of CmaCh03G013330 vs. TrEMBL
Match: A0A0A0KNM1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519720 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.4e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. TrEMBL
Match: E5GC30_CUCME (GTP-binding protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.4e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. TrEMBL
Match: A0A061GEU5_THECC (RAB GTPase A1C OS=Theobroma cacao GN=TCM_029653 PE=4 SV=1)

HSP 1 Score: 388.7 bits (997), Expect = 4.8e-105
Identity = 194/218 (88.99%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN+DGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAVSTED KSFAE ESLYFMETSALEA NV+NAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+  D+ AASAV +KGEKID+SKDVS +KKGGCCSS
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. TrEMBL
Match: A0A0B0P979_GOSAR (Ras-related RABA1c-like protein OS=Gossypium arboreum GN=F383_25082 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-104
Identity = 193/218 (88.53%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRAEDDYD+LFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN+DGK
Sbjct: 1   MAGYRAEDDYDFLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ SD+ AASAV +KGEKID+ KDVS +KKGGCCSS
Sbjct: 181 KAMETSDEGAASAVPSKGEKIDVGKDVSAIKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. TrEMBL
Match: A0A0D2UN41_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G160700 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-104
Identity = 193/218 (88.53%), Postives = 210/218 (96.33%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRAEDDYD+LFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN+DGK
Sbjct: 1   MAGYRAEDDYDFLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KA++ SD+ AASAV +KGEKID+SKDVS +KKGGCCSS
Sbjct: 181 KAIETSDEGAASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. TAIR10
Match: AT5G45750.1 (AT5G45750.1 RAB GTPase homolog A1C)

HSP 1 Score: 368.6 bits (945), Expect = 2.6e-102
Identity = 188/218 (86.24%), Postives = 205/218 (94.04%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+D+YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+D K
Sbjct: 1   MAGYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE WLKELR+HTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQI+HIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A+ ++A   V +KG+KIDI KDVS VKKGGCCS+
Sbjct: 181 KAMEAASESA--NVPSKGDKIDIGKDVSAVKKGGCCSN 216

[Close]

BLAST of CmaCh03G013330 vs. TAIR10
Match: AT4G18800.1 (AT4G18800.1 RAB GTPase homolog A1D)

HSP 1 Score: 359.8 bits (922), Expect = 1.2e-99
Identity = 183/218 (83.94%), Postives = 203/218 (93.12%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRA+DDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN++ K
Sbjct: 1   MAGYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAV TEDAKSFAE ESLYFMETSALE+ NV+NAF+EVLTQIYH+VSK
Sbjct: 121 VMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A +D  +  V +KGEKID+  DVS VKK GCCS+
Sbjct: 181 KAMEAGED--SGNVPSKGEKIDV--DVSAVKKTGCCSN 214

[Close]

BLAST of CmaCh03G013330 vs. TAIR10
Match: AT1G16920.1 (AT1G16920.1 RAB GTPase homolog A1B)

HSP 1 Score: 340.9 bits (873), Expect = 5.8e-94
Identity = 171/218 (78.44%), Postives = 196/218 (89.91%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YR EDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEF+LESKSTIGVEFATR+L +DGK
Sbjct: 1   MAGYRVEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTR +T+ENV++WLKEL++HTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHL+AV TED KS+AE ESL FMETSALEA NV++AFAEVLTQIY I SK
Sbjct: 121 VMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           K ++A +D  AS  + KGEKI++  DVS +KK GCCS+
Sbjct: 181 KQVEAGEDGNAS--VPKGEKIEVKNDVSALKKLGCCSN 216

[Close]

BLAST of CmaCh03G013330 vs. TAIR10
Match: AT5G60860.1 (AT5G60860.1 RAB GTPase homolog A1F)

HSP 1 Score: 337.8 bits (865), Expect = 4.9e-93
Identity = 171/220 (77.73%), Postives = 197/220 (89.55%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+D+YDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH T+ENVE+WLKELRDHTD NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           IM VGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALE+MNV+NAF EVL+QIY +VS+
Sbjct: 121 IMFVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSR 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS 219
           KA+D  DD AA   L KG+ I++    DVS VKK GCCS+
Sbjct: 181 KALDIGDDPAA---LPKGQTINVGSKDDVSAVKKVGCCSN 217

[Close]

BLAST of CmaCh03G013330 vs. TAIR10
Match: AT3G15060.1 (AT3G15060.1 RAB GTPase homolog A1G)

HSP 1 Score: 337.0 bits (863), Expect = 8.4e-93
Identity = 170/220 (77.27%), Postives = 196/220 (89.09%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+AYRA+DDYD+L+KVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRS+++D K
Sbjct: 1   MAAYRADDDYDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           ++KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRH T+ENVE+WLKELRDHT+ NIV
Sbjct: 61  IVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           IMLVGNK+DLRHL AVSTEDAK+FAE E+ +FMETSALEA+NV+NAF EVL+QIY + SK
Sbjct: 121 IMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISK--DVSEVKKGGCCSS 219
           KA+D  DD      L KG+ I++    DVSEVKK GCCSS
Sbjct: 181 KALDIGDD---HTTLPKGQSINVGSKDDVSEVKKVGCCSS 217

[Close]

BLAST of CmaCh03G013330 vs. NCBI nr
Match: gi|449433734|ref|XP_004134652.1| (PREDICTED: ras-related protein RABA1c-like [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 2.0e-112
Identity = 211/218 (96.79%), Postives = 216/218 (99.08%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK
Sbjct: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHSTYENVEKWLKELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEA NVDNAFAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ +DDAAASAV+AKGEKIDISKDVSEVKKGGCCSS
Sbjct: 181 KAMETNDDAAASAVIAKGEKIDISKDVSEVKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. NCBI nr
Match: gi|590623434|ref|XP_007025321.1| (RAB GTPase A1C [Theobroma cacao])

HSP 1 Score: 388.7 bits (997), Expect = 6.9e-105
Identity = 194/218 (88.99%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN+DGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAVSTED KSFAE ESLYFMETSALEA NV+NAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+  D+ AASAV +KGEKID+SKDVS +KKGGCCSS
Sbjct: 181 KAMETGDEGAASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. NCBI nr
Match: gi|728840443|gb|KHG19886.1| (Ras-related RABA1c -like protein [Gossypium arboreum])

HSP 1 Score: 387.5 bits (994), Expect = 1.5e-104
Identity = 193/218 (88.53%), Postives = 209/218 (95.87%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRAEDDYD+LFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN+DGK
Sbjct: 1   MAGYRAEDDYDFLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+ SD+ AASAV +KGEKID+ KDVS +KKGGCCSS
Sbjct: 181 KAMETSDEGAASAVPSKGEKIDVGKDVSAIKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. NCBI nr
Match: gi|823224567|ref|XP_012445054.1| (PREDICTED: ras-related protein RABA1c [Gossypium raimondii])

HSP 1 Score: 386.7 bits (992), Expect = 2.6e-104
Identity = 193/218 (88.53%), Postives = 210/218 (96.33%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRAEDDYD+LFKVVLIGDSGVGKSNLLSRFT+NEFSLESKSTIGVEFATRSLN+DGK
Sbjct: 1   MAGYRAEDDYDFLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           VIKAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +ML+GNKSDLRHLVAV TEDAKSFAE ESLYFMETSALEA NV+NAFAEVLTQIYHIVSK
Sbjct: 121 VMLIGNKSDLRHLVAVPTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KA++ SD+ AASAV +KGEKID+SKDVS +KKGGCCSS
Sbjct: 181 KAIETSDEGAASAVPSKGEKIDVSKDVSAMKKGGCCSS 218

[Close]

BLAST of CmaCh03G013330 vs. NCBI nr
Match: gi|449459304|ref|XP_004147386.1| (PREDICTED: ras-related protein RABA1c [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 1.0e-103
Identity = 193/218 (88.53%), Postives = 207/218 (94.95%), Query Frame = 1


Query: 1   MSAYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGK 60
           M+ YRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLN+DGK
Sbjct: 1   MAGYRAEDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGK 60

Query: 61  VIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDVTRHSTYENVEKWLKELRDHTDPNIV 120
           V+KAQIWDTAGQERYRAITSAYYRGAVGAL+VYDVTRHST+ENVE+WL+ELRDHTDPNIV
Sbjct: 61  VVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIV 120

Query: 121 IMLVGNKSDLRHLVAVSTEDAKSFAETESLYFMETSALEAMNVDNAFAEVLTQIYHIVSK 180
           +MLVGNKSDLRHLVAVSTED KSFAE ESLYFMETSALEA NV+N+FAEVLTQIYHIVSK
Sbjct: 121 VMLVGNKSDLRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSK 180

Query: 181 KAMDASDDAAASAVLAKGEKIDISKDVSEVKKGGCCSS 219
           KAM+A D  AA++V  KGEKID+SKDVS VKK GCCSS
Sbjct: 181 KAMEAGDGTAAASVPPKGEKIDVSKDVSAVKKAGCCSS 218

The following BLAST results are available for this feature:

BLAST of CmaCh03G013330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAA1C_ARATH	4.6e-101	86.24	Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=2 SV=1	[more]
RAA1D_ARATH	2.2e-98	83.94	Ras-related protein RABA1d OS=Arabidopsis thaliana GN=RABA1D PE=2 SV=1	[more]
RIC2_ORYSJ	3.7e-98	83.33	Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2	[more]
YPT3_NICPL	4.2e-94	79.36	Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1	[more]
RAA1B_ARATH	1.0e-92	78.44	Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1	[more]

BLAST of CmaCh03G013330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNM1_CUCSA	1.4e-112	96.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G519720 PE=4 SV=1	[more]
E5GC30_CUCME	1.4e-112	96.79	GTP-binding protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A061GEU5_THECC	4.8e-105	88.99	RAB GTPase A1C OS=Theobroma cacao GN=TCM_029653 PE=4 SV=1	[more]
A0A0B0P979_GOSAR	1.1e-104	88.53	Ras-related RABA1c-like protein OS=Gossypium arboreum GN=F383_25082 PE=4 SV=1	[more]
A0A0D2UN41_GOSRA	1.8e-104	88.53	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G160700 PE=4 SV=1	[more]

BLAST of CmaCh03G013330 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45750.1	2.6e-102	86.24	RAB GTPase homolog A1C	[more]
AT4G18800.1	1.2e-99	83.94	RAB GTPase homolog A1D	[more]
AT1G16920.1	5.8e-94	78.44	RAB GTPase homolog A1B	[more]
AT5G60860.1	4.9e-93	77.73	RAB GTPase homolog A1F	[more]
AT3G15060.1	8.4e-93	77.27	RAB GTPase homolog A1G	[more]

BLAST of CmaCh03G013330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433734\|ref\|XP_004134652.1\|	2.0e-112	96.79	PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]	[more]
gi\|590623434\|ref\|XP_007025321.1\|	6.9e-105	88.99	RAB GTPase A1C [Theobroma cacao]	[more]
gi\|728840443\|gb\|KHG19886.1\|	1.5e-104	88.53	Ras-related RABA1c -like protein [Gossypium arboreum]	[more]
gi\|823224567\|ref\|XP_012445054.1\|	2.6e-104	88.53	PREDICTED: ras-related protein RABA1c [Gossypium raimondii]	[more]
gi\|449459304\|ref\|XP_004147386.1\|	1.0e-103	88.53	PREDICTED: ras-related protein RABA1c [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0008152	metabolic process
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0008150	biological_process
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0050662	coenzyme binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G013330.1	CmaCh03G013330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 15..175 score: 3.5
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 12..170 score: 3.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 6..216 score: 8.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..180 score: 1.61
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 55..77 score: 1.8E-42coord: 117..130 score: 1.8E-42coord: 152..174 score: 1.8E-42coord: 37..53 score: 1.8E-42coord: 14..35 score: 1.8
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 5..218 score: 1.3E
None	No IPR available	PANTHER	PTHR24073:SF432	RAS-RELATED PROTEIN RABA1C-RELATED	coord: 5..218 score: 1.3E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 score: 3.5
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 16..173 score: 4.8
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 score: 4.9E
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..210 score: 4.
None	No IPR available	PROFILE	PS51419	RAB	coord: 9..216 score: 35

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G013330	Cucsa.047100	Cucumber (Gy14) v1	cgycmaB0045
CmaCh03G013330	Cucsa.212860	Cucumber (Gy14) v1	cgycmaB0618
CmaCh03G013330	Cla009707	Watermelon (97103) v1	cmawmB628
CmaCh03G013330	Cla019645	Watermelon (97103) v1	cmawmB622
CmaCh03G013330	Csa1G469730	Cucumber (Chinese Long) v2	cmacuB650
CmaCh03G013330	Csa6G519720	Cucumber (Chinese Long) v2	cmacuB678
CmaCh03G013330	MELO3C007200	Melon (DHL92) v3.5.1	cmameB618
CmaCh03G013330	MELO3C002676	Melon (DHL92) v3.5.1	cmameB592
CmaCh03G013330	ClCG03G007460	Watermelon (Charleston Gray)	cmawcgB583
CmaCh03G013330	ClCG01G023880	Watermelon (Charleston Gray)	cmawcgB576
CmaCh03G013330	CSPI01G21880	Wild cucumber (PI 183967)	cmacpiB655
CmaCh03G013330	CSPI06G35530	Wild cucumber (PI 183967)	cmacpiB686
CmaCh03G013330	CmoCh18G004090	Cucurbita moschata (Rifu)	cmacmoB644
CmaCh03G013330	CmoCh07G001690	Cucurbita moschata (Rifu)	cmacmoB672
CmaCh03G013330	CmoCh13G006130	Cucurbita moschata (Rifu)	cmacmoB638
CmaCh03G013330	CmoCh03G013340	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G013330	Lsi02G008310	Bottle gourd (USVL1VR-Ls)	cmalsiB606
CmaCh03G013330	Cp4.1LG09g07830	Cucurbita pepo (Zucchini)	cmacpeB653
CmaCh03G013330	Cp4.1LG19g06740	Cucurbita pepo (Zucchini)	cmacpeB667
CmaCh03G013330	Cp4.1LG20g04760	Cucurbita pepo (Zucchini)	cmacpeB675
CmaCh03G013330	MELO3C007200.2	Melon (DHL92) v3.6.1	cmamedB704
CmaCh03G013330	MELO3C002676.2	Melon (DHL92) v3.6.1	cmamedB677
CmaCh03G013330	CsaV3_6G051030	Cucumber (Chinese Long) v3	cmacucB0807
CmaCh03G013330	CsaV3_1G033100	Cucumber (Chinese Long) v3	cmacucB0776
CmaCh03G013330	Cla97C01G023840	Watermelon (97103) v2	cmawmbB667
CmaCh03G013330	Cla97C03G058730	Watermelon (97103) v2	cmawmbB682
CmaCh03G013330	Bhi07G000179	Wax gourd	cmawgoB0810
CmaCh03G013330	Bhi08G001771	Wax gourd	cmawgoB0808
CmaCh03G013330	CsGy6G035020	Cucumber (Gy14) v2	cgybcmaB830
CmaCh03G013330	CsGy1G021580	Cucumber (Gy14) v2	cgybcmaB127
CmaCh03G013330	Carg19896	Silver-seed gourd	carcmaB1111
CmaCh03G013330	Carg14567	Silver-seed gourd	carcmaB0199
CmaCh03G013330	Carg23112	Silver-seed gourd	carcmaB1311

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh03G013330	CmaCh13G005840	Cucurbita maxima (Rimu)	cmacmaB232
CmaCh03G013330	CmaCh18G004300	Cucurbita maxima (Rimu)	cmacmaB397
CmaCh03G013330	CmaCh07G001740	Cucurbita maxima (Rimu)	cmacmaB528

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G013330	Silver-seed gourd	carcmaB0763
CmaCh03G013330	Wax gourd	cmawgoB0787
CmaCh03G013330	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G013330	Bottle gourd (USVL1VR-Ls)	cmalsiB602