CmaCh03G011790 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G011790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	AT hook motif DNA-binding family protein
Location	Cma_Chr03 : 7877999 .. 7879218 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATGAGAACACGGCCAACGGTTCTTCCCCTAAGATCTTCGCTTCACTGGAACCAATCATTGAAGAATCACTACTGGAAGATACCTGGAAAAACTCGATGCCAAATTATATGGCGGTGGCTCCGTCGACGCCAATATCAATTATACCGACAACAACCGAAGACTGGGATGCTTTTTTTGCCGCGCCACCGCCGCCTTCTCCAAAACGACTACGAATAAGCAATGACATTCTTGCTTCAATGGGTACGCAAAGATCTTCAGAAAGCTTCATTCTTTCGTGTTTGGTTATATCAAGAACTAAAATTTCTTCAGAAAAGATGGTTCTTTTGAAGGCGAAATAGCTTTGTCCAGCGACAACTTAAAACAAAATATAATCCACATTTACCCCGGCCAGGTAAGAACTACAATCAAATGTTCTTTTCAAATCTTGAACTTTAATCTGAGATCAGATCAAAACTCCAAAAGTGAAAGTAAAGGTAACAATATCGGCTAGCGTGAACTTTAGCAATTATAAATAGTGTCAAAGACAGATATAGAACAATGTGTCAATGAGTAGTCTGAATCCTTAAAAGGGGTGGACACGAGGTGATGTATTAGTAAGATACTGAATCTCGAACGAGTGTCAGGGGTGTTACATTTAATCGGTCTTTTTCTACTTCTATTGGGTATTGCAGGACATTGTGGAAAAAATCATGTCATTCTGTAAAGAGGGTCATCGGGTAGCTACAGTTTTGAGTGCCGATGCCGAAGCGACAGTTTCAAGTGCCACCCTTCGTGGACCTGCAAGCGAAGTCGCGTTGGAGGTAATCAAGGGGCAAATTAAACTCATGAATTTTCTTGGAAAAAGATGAACCAATTTCGATTTTGTGTAGGGTCGGTTCGAAATACTGTCATTAACAGGGAGGTTTGTAGCTAGTGAATGCGAAAGCGCAGGCAACGGTGGAGCAGGAGGCCGCCTTCACTTAACAGTGTCGATGGTTTTGCAGGACGCGAAGGTCATCGGAGGCACTGTCGTTGGTCCATTAATGGCGGCTACACGCATGCATGTTCGTATACATTGTCTATGACATGTTTGAGAATGCTCTGTTTAAAAGCACTTCCATTTGCTACTCATTTTTTGCAGGTTGTGATTGGAACATTGGACCCAGTTCCATATAAACCAAAGGCAGAGATCAATTTAAACATAACACCACCGTCGTCATCATCTTCTAGCTAG

mRNA sequence

ATGGAAGATGAGAACACGGCCAACGGTTCTTCCCCTAAGATCTTCGCTTCACTGGAACCAATCATTGAAGAATCACTACTGGAAGATACCTGGAAAAACTCGATGCCAAATTATATGGCGGTGGCTCCGTCGACGCCAATATCAATTATACCGACAACAACCGAAGACTGGGATGCTTTTTTTGCCGCGCCACCGCCGCCTTCTCCAAAACGACTACGAATAAGCAATGACATTCTTGCTTCAATGGGCGAAATAGCTTTGTCCAGCGACAACTTAAAACAAAATATAATCCACATTTACCCCGGCCAGGACATTGTGGAAAAAATCATGTCATTCTGTAAAGAGGGTCATCGGGTAGCTACAGTTTTGAGTGCCGATGCCGAAGCGACAGTTTCAAGTGCCACCCTTCGTGGACCTGCAAGCGAAGTCGCGTTGGAGGGTCGGTTCGAAATACTGTCATTAACAGGGAGGTTTGTAGCTAGTGAATGCGAAAGCGCAGGCAACGGTGGAGCAGGAGGCCGCCTTCACTTAACAGTGTCGATGGTTTTGCAGGACGCGAAGGTCATCGGAGGCACTGTCGTTGGTCCATTAATGGCGGCTACACGCATGCATGTTGTGATTGGAACATTGGACCCAGTTCCATATAAACCAAAGGCAGAGATCAATTTAAACATAACACCACCGTCGTCATCATCTTCTAGCTAG

Coding sequence (CDS)

ATGGAAGATGAGAACACGGCCAACGGTTCTTCCCCTAAGATCTTCGCTTCACTGGAACCAATCATTGAAGAATCACTACTGGAAGATACCTGGAAAAACTCGATGCCAAATTATATGGCGGTGGCTCCGTCGACGCCAATATCAATTATACCGACAACAACCGAAGACTGGGATGCTTTTTTTGCCGCGCCACCGCCGCCTTCTCCAAAACGACTACGAATAAGCAATGACATTCTTGCTTCAATGGGCGAAATAGCTTTGTCCAGCGACAACTTAAAACAAAATATAATCCACATTTACCCCGGCCAGGACATTGTGGAAAAAATCATGTCATTCTGTAAAGAGGGTCATCGGGTAGCTACAGTTTTGAGTGCCGATGCCGAAGCGACAGTTTCAAGTGCCACCCTTCGTGGACCTGCAAGCGAAGTCGCGTTGGAGGGTCGGTTCGAAATACTGTCATTAACAGGGAGGTTTGTAGCTAGTGAATGCGAAAGCGCAGGCAACGGTGGAGCAGGAGGCCGCCTTCACTTAACAGTGTCGATGGTTTTGCAGGACGCGAAGGTCATCGGAGGCACTGTCGTTGGTCCATTAATGGCGGCTACACGCATGCATGTTGTGATTGGAACATTGGACCCAGTTCCATATAAACCAAAGGCAGAGATCAATTTAAACATAACACCACCGTCGTCATCATCTTCTAGCTAG

Protein sequence

MEDENTANGSSPKIFASLEPIIEESLLEDTWKNSMPNYMAVAPSTPISIIPTTTEDWDAFFAAPPPPSPKRLRISNDILASMGEIALSSDNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPASEVALEGRFEILSLTGRFVASECESAGNGGAGGRLHLTVSMVLQDAKVIGGTVVGPLMAATRMHVVIGTLDPVPYKPKAEINLNITPPSSSSSS

Homology

[Close]

BLAST of CmaCh03G011790 vs. Swiss-Prot
Match: AHL9_ARATH (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana GN=AHL9 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13
Identity = 54/150 (36.00%), Postives = 88/150 (58.67%), Query Frame = 1


Query: 65  PPPSPKRLRISNDILASMGEIALSSDNLK--QNIIHIYPGQDIVEKIMSFCKEGHRVATV 124
           PP S K+ R     +AS+GE+  SS  +    ++I +  G+DI  K+++F ++G R   V
Sbjct: 138 PPGSGKKQR-----MASVGELMPSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICV 197

Query: 125 LSADAEATVSSATLRGPASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRLHLTV 184
           LSA     VS+ATL  P++    +  EGRFEIL+L+  ++ +   S  N       +L+V
Sbjct: 198 LSASG--AVSTATLIQPSASPGAIKYEGRFEILALSTSYIVATDGSFRNRTG----NLSV 257

Query: 185 SMVLQDAKVIGGTVVGPLMAATRMHVVIGT 210
           S+   D +VIGG + GPL+AA+ + V++G+
Sbjct: 258 SLASPDGRVIGGAIGGPLIAASPVQVIVGS 276

[Close]

BLAST of CmaCh03G011790 vs. Swiss-Prot
Match: AHL7_ARATH (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana GN=AHL7 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-13
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 1


Query: 91  NLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPAS---EVALEG 150
           N   ++I +  G+DI  +I+SF ++G R   +LSA+    +S+ TLR P S    +  EG
Sbjct: 122 NFTPHVITVNTGEDITMRIISFSQQGPRAICILSAN--GVISNVTLRQPDSCGGTLTYEG 181

Query: 151 RFEILSLTGRFVASECESAGNGGAGGRLHLTVSMVLQDAKVIGGTVVGPLMAATRMHVVI 210
           RFEILSL+G F+  E E+ G+ G  G   ++VS+   D +V+GG V G L+AAT + VV+
Sbjct: 182 RFEILSLSGSFM--ETENQGSKGRSG--GMSVSLAGPDGRVVGGGVAGLLIAATPIQVVV 237

[Close]

BLAST of CmaCh03G011790 vs. Swiss-Prot
Match: AHL1_ARATH (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana GN=AHL1 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.7e-13
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1


Query: 81  SMGEIALSS--DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRG 140
           ++GE A  S   N   +II +  G+D+  KI+SF ++G R   VLSA+    +SS TLR 
Sbjct: 157 NLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSAN--GVISSVTLRQ 216

Query: 141 PASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRL-HLTVSMVLQDAKVIGGTVV 200
           P S    +  EGRFEILSL+G F+ ++     +GG   R   ++VS+   D +V+GG + 
Sbjct: 217 PDSSGGTLTYEGRFEILSLSGSFMPND-----SGGTRSRTGGMSVSLASPDGRVVGGGLA 276

Query: 201 GPLMAATRMHVVIGTL----DPVPYKPK 219
           G L+AA+ + VV+G+     D    KPK
Sbjct: 277 GLLVAASPVQVVVGSFLAGTDHQDQKPK 297

[Close]

BLAST of CmaCh03G011790 vs. Swiss-Prot
Match: AHL14_ARATH (AT-hook motif nuclear-localized protein 14 OS=Arabidopsis thaliana GN=AHL14 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.7e-13
Identity = 47/133 (35.34%), Postives = 76/133 (57.14%), Query Frame = 1


Query: 80  ASMGEIALSSDNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGP 139
           + +G +  +      +I++I PG+D+V+KIM F  +      VLS  A  T+S+A+LR P
Sbjct: 159 SQLGSVGKTGQCFTPHIVNIAPGEDVVQKIMMFANQSKHELCVLS--ASGTISNASLRQP 218

Query: 140 A---SEVALEGRFEILSLTGRFVASECESAGNGGAGGRLHLTVSMVLQDAKVIGGTVVGP 199
           A     +  EG++EILSL+G ++ +E      GG  G   L+VS+   D ++IGG +   
Sbjct: 219 APSGGNLPYEGQYEILSLSGSYIRTE-----QGGKSG--GLSVSLSASDGQIIGGAIGSH 278

Query: 200 LMAATRMHVVIGT 210
           L AA  + V++GT
Sbjct: 279 LTAAGPVQVILGT 282

[Close]

BLAST of CmaCh03G011790 vs. Swiss-Prot
Match: AHL10_ARATH (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana GN=AHL10 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 9.6e-12
Identity = 58/174 (33.33%), Postives = 88/174 (50.57%), Query Frame = 1


Query: 42  APSTPISIIPTTTEDWDAFFAAPPPPSPKRLRISNDILASMGEIALSSDNLKQNIIHIYP 101
           APS  +S   +  +  +     PP  S KRL+     L ++G   +       +++ +  
Sbjct: 121 APSFTVSQPSSGGDGGEKKRGRPPGSSSKRLK-----LQALGSTGIG---FTPHVLTVLA 180

Query: 102 GQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPASE---VALEGRFEILSLTGRF 161
           G+D+  KIM+    G R   VLSA+    +S+ TLR  A+    V  EGRFEILSL+G F
Sbjct: 181 GEDVSSKIMALTHNGPRAVCVLSANG--AISNVTLRQSATSGGTVTYEGRFEILSLSGSF 240

Query: 162 VASECESAGNGGAGGRLHLTVSMVLQDAKVIGGTVVGPLMAATRMHVVIGTLDP 213
              E     NG       L+VS+   D  V+GG+V G L+AA+ + +V+G+  P
Sbjct: 241 HLLE----NNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLP 280

[Close]

BLAST of CmaCh03G011790 vs. TrEMBL
Match: D5AA24_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16
Identity = 69/172 (40.12%), Postives = 98/172 (56.98%), Query Frame = 1


Query: 65  PPPSPKRLRISNDILASMGEIALSSDNL--KQNIIHIYPGQDIVEKIMSFCKEGHRVATV 124
           PP S K+ R     LA++GE  + S  +    ++I I  G+D+  KIMSF ++G R   +
Sbjct: 62  PPGSGKKQR-----LAALGEWVVGSAGIGFTPHVITIAAGEDVASKIMSFSQQGPRAVCI 121

Query: 125 LSADAEATVSSATLRGPASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRLH-LT 184
           LSA+    +S+ TLR PA+    +  EGRFEILSL+G F+ +E     NGGA  R   L+
Sbjct: 122 LSANG--AISNVTLRQPATSGGTLTYEGRFEILSLSGSFMLTE-----NGGARSRTGGLS 181

Query: 185 VSMVLQDAKVIGGTVVGPLMAATRMHVVIGTL-------DPVPYKPKAEINL 224
           VS+   D +V+GG V G LMAA+ + VV+G+         P P KP+  I L
Sbjct: 182 VSLASPDGRVVGGGVAGMLMAASPVQVVVGSFISNGQKDPPKPAKPEPSIGL 221

[Close]

BLAST of CmaCh03G011790 vs. TrEMBL
Match: A0A068V458_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00043042001 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.4e-16
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 1


Query: 78  ILASMGEIALSS--DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSAT 137
           +LAS+GE+  S+   +   +++++Y G+D+  KI+SF ++G R   VLSA+   TVS+ T
Sbjct: 252 LLASLGELFASTAGGDFTPHVVNVYTGEDVAGKILSFAQKGPRGLCVLSAN--GTVSNVT 311

Query: 138 LRGPASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRL-HLTVSMVLQDAKVIGG 197
           +R P S    +  EGRFEIL+LTG F  SE     NGG   R   L+VS+   D +VIGG
Sbjct: 312 IRQPGSSGGILTYEGRFEILTLTGSFTISE-----NGGIKSRSGGLSVSLAGPDGRVIGG 371

Query: 198 TVVGPLMAATRMHVVIGTLDPVPYK 217
            V G L+AA+ + +V+G+  P  YK
Sbjct: 372 GVAGLLLAASPIQIVVGSFMPNGYK 389

[Close]

BLAST of CmaCh03G011790 vs. TrEMBL
Match: M0T157_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.9e-15
Identity = 70/197 (35.53%), Postives = 104/197 (52.79%), Query Frame = 1


Query: 34  SMPNYMAVAPSTPIS----IIPTTTEDWDAFFAAPPPPSPKRLRISNDILASMGEIALSS 93
           S+    +V+ S+P +    + P+ + D        PP S K+L+        MG +  + 
Sbjct: 182 SLATAASVSSSSPTAGTGHLAPSGSADAKKKPKGRPPGSSKKLQ--------MGVLGSAG 241

Query: 94  DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPASE---VALE 153
                +II +  G+D+  KIMS  + G R   +LSA+    +S+ TLR PA+    V  E
Sbjct: 242 TGFTPHIITVMAGEDVSSKIMSLSQHGSRAICILSANG--AISNVTLRQPATSGGTVTYE 301

Query: 154 GRFEILSLTGRFVASECESAGNGGAGGRLH-LTVSMVLQDAKVIGGTVVGPLMAATRMHV 213
           GRFEILSL+G F+ SE     +GG   R   L+VS+   D +V+GG V G LMAA+ + V
Sbjct: 302 GRFEILSLSGSFLLSE-----SGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLMAASPVQV 361

Query: 214 VIGTLDPVPYKPKAEIN 223
           V+G+  PV  K   +IN
Sbjct: 362 VVGSFIPVVKKESKQIN 363

[Close]

BLAST of CmaCh03G011790 vs. TrEMBL
Match: M0T3U0_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 70/196 (35.71%), Postives = 103/196 (52.55%), Query Frame = 1


Query: 36  PNYMAVAP-STPISIIPTTTEDWDAFFAAPPPPSPKRLRI----SNDILASMGEIALSSD 95
           P+ +A+ P ST  S++P           A P  + K+ R     S +    +G +  S  
Sbjct: 112 PHGLALNPLSTAASVLPVAGAFSPPAGMANPADATKKPRGRPPGSGNKKQKLGALGSSGT 171

Query: 96  NLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPASE---VALEG 155
               ++I +  G+D+  KIMSF + G R   +LSA+    +S+ TLR PA+    V  EG
Sbjct: 172 GFTPHVITVTAGEDVFSKIMSFSQHGSRAICILSANG--AISNVTLRQPATSGGTVTYEG 231

Query: 156 RFEILSLTGRFVASECESAGNGGAGGRLH-LTVSMVLQDAKVIGGTVVGPLMAATRMHVV 215
           RFEILSL+G F+ SE     +GG   R   L+VS+   D +V+GG V G LMAA+ + VV
Sbjct: 232 RFEILSLSGSFLLSE-----SGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLMAASPVQVV 291

Query: 216 IGTLDPVPYKPKAEIN 223
           +G+  P   K   +IN
Sbjct: 292 MGSFIPDGKKGSKQIN 300

[Close]

BLAST of CmaCh03G011790 vs. TrEMBL
Match: A0A022RI74_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a007662mg PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-14
Identity = 61/154 (39.61%), Postives = 93/154 (60.39%), Query Frame = 1


Query: 77  DILASMGEIALSS--DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSA 136
           +ILAS+GE+  ++   +   +++ ++ G+D+  KI++F ++GHR   VLSA+   +VS+ 
Sbjct: 163 NILASLGELFANTAGGDFTPHVVTVHTGEDVAGKILTFAQKGHRGICVLSANG--SVSNV 222

Query: 137 TLRGPASEVAL-----EGRFEILSLTGRFVASECESAGNGGAGGRLHLTVSMVLQDAKVI 196
           TLR P S   L     EGRFEIL+LTG +  S+        AGG   L+VS+   D +VI
Sbjct: 223 TLRQPGSSGDLLLTEYEGRFEILTLTGSYTVSD-SGGMKSRAGG---LSVSLASPDGRVI 282

Query: 197 GGTVVGPLMAATRMHVVIGTLDPVPYK-PKAEIN 223
           GG V G LMAA+ + +V+G+  P   K PK + N
Sbjct: 283 GGGVAGLLMAASPIQIVVGSFVPNGIKIPKRKYN 310

[Close]

BLAST of CmaCh03G011790 vs. TAIR10
Match: AT2G45850.1 (AT2G45850.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-15
Identity = 54/150 (36.00%), Postives = 88/150 (58.67%), Query Frame = 1


Query: 65  PPPSPKRLRISNDILASMGEIALSSDNLK--QNIIHIYPGQDIVEKIMSFCKEGHRVATV 124
           PP S K+ R     +AS+GE+  SS  +    ++I +  G+DI  K+++F ++G R   V
Sbjct: 138 PPGSGKKQR-----MASVGELMPSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICV 197

Query: 125 LSADAEATVSSATLRGPASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRLHLTV 184
           LSA     VS+ATL  P++    +  EGRFEIL+L+  ++ +   S  N       +L+V
Sbjct: 198 LSASG--AVSTATLIQPSASPGAIKYEGRFEILALSTSYIVATDGSFRNRTG----NLSV 257

Query: 185 SMVLQDAKVIGGTVVGPLMAATRMHVVIGT 210
           S+   D +VIGG + GPL+AA+ + V++G+
Sbjct: 258 SLASPDGRVIGGAIGGPLIAASPVQVIVGS 276

[Close]

BLAST of CmaCh03G011790 vs. TAIR10
Match: AT4G00200.1 (AT4G00200.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 77.8 bits (190), Expect = 9.9e-15
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 1


Query: 91  NLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPAS---EVALEG 150
           N   ++I +  G+DI  +I+SF ++G R   +LSA+    +S+ TLR P S    +  EG
Sbjct: 122 NFTPHVITVNTGEDITMRIISFSQQGPRAICILSAN--GVISNVTLRQPDSCGGTLTYEG 181

Query: 151 RFEILSLTGRFVASECESAGNGGAGGRLHLTVSMVLQDAKVIGGTVVGPLMAATRMHVVI 210
           RFEILSL+G F+  E E+ G+ G  G   ++VS+   D +V+GG V G L+AAT + VV+
Sbjct: 182 RFEILSLSGSFM--ETENQGSKGRSG--GMSVSLAGPDGRVVGGGVAGLLIAATPIQVVV 237

[Close]

BLAST of CmaCh03G011790 vs. TAIR10
Match: AT4G12080.1 (AT4G12080.1 AT-hook motif nuclear-localized protein 1)

HSP 1 Score: 75.9 bits (185), Expect = 3.8e-14
Identity = 57/148 (38.51%), Postives = 85/148 (57.43%), Query Frame = 1


Query: 81  SMGEIALSS--DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRG 140
           ++GE A  S   N   +II +  G+D+  KI+SF ++G R   VLSA+    +SS TLR 
Sbjct: 157 NLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSAN--GVISSVTLRQ 216

Query: 141 PASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRL-HLTVSMVLQDAKVIGGTVV 200
           P S    +  EGRFEILSL+G F+ ++     +GG   R   ++VS+   D +V+GG + 
Sbjct: 217 PDSSGGTLTYEGRFEILSLSGSFMPND-----SGGTRSRTGGMSVSLASPDGRVVGGGLA 276

Query: 201 GPLMAATRMHVVIGTL----DPVPYKPK 219
           G L+AA+ + VV+G+     D    KPK
Sbjct: 277 GLLVAASPVQVVVGSFLAGTDHQDQKPK 297

[Close]

BLAST of CmaCh03G011790 vs. TAIR10
Match: AT3G04590.2 (AT3G04590.2 AT hook motif DNA-binding family protein)

HSP 1 Score: 75.5 bits (184), Expect = 4.9e-14
Identity = 47/133 (35.34%), Postives = 76/133 (57.14%), Query Frame = 1


Query: 80  ASMGEIALSSDNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGP 139
           + +G +  +      +I++I PG+D+V+KIM F  +      VLS  A  T+S+A+LR P
Sbjct: 159 SQLGSVGKTGQCFTPHIVNIAPGEDVVQKIMMFANQSKHELCVLS--ASGTISNASLRQP 218

Query: 140 A---SEVALEGRFEILSLTGRFVASECESAGNGGAGGRLHLTVSMVLQDAKVIGGTVVGP 199
           A     +  EG++EILSL+G ++ +E      GG  G   L+VS+   D ++IGG +   
Sbjct: 219 APSGGNLPYEGQYEILSLSGSYIRTE-----QGGKSG--GLSVSLSASDGQIIGGAIGSH 278

Query: 200 LMAATRMHVVIGT 210
           L AA  + V++GT
Sbjct: 279 LTAAGPVQVILGT 282

[Close]

BLAST of CmaCh03G011790 vs. TAIR10
Match: AT2G33620.1 (AT2G33620.1 AT hook motif DNA-binding family protein)

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-13
Identity = 58/174 (33.33%), Postives = 88/174 (50.57%), Query Frame = 1


Query: 42  APSTPISIIPTTTEDWDAFFAAPPPPSPKRLRISNDILASMGEIALSSDNLKQNIIHIYP 101
           APS  +S   +  +  +     PP  S KRL+     L ++G   +       +++ +  
Sbjct: 121 APSFTVSQPSSGGDGGEKKRGRPPGSSSKRLK-----LQALGSTGIG---FTPHVLTVLA 180

Query: 102 GQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPASE---VALEGRFEILSLTGRF 161
           G+D+  KIM+    G R   VLSA+    +S+ TLR  A+    V  EGRFEILSL+G F
Sbjct: 181 GEDVSSKIMALTHNGPRAVCVLSANG--AISNVTLRQSATSGGTVTYEGRFEILSLSGSF 240

Query: 162 VASECESAGNGGAGGRLHLTVSMVLQDAKVIGGTVVGPLMAATRMHVVIGTLDP 213
              E     NG       L+VS+   D  V+GG+V G L+AA+ + +V+G+  P
Sbjct: 241 HLLE----NNGQRSRTGGLSVSLSSPDGNVLGGSVAGLLIAASPVQIVVGSFLP 280

[Close]

BLAST of CmaCh03G011790 vs. NCBI nr
Match: gi|294461667|gb|ADE76393.1| (unknown [Picea sitchensis])

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16
Identity = 69/172 (40.12%), Postives = 98/172 (56.98%), Query Frame = 1


Query: 65  PPPSPKRLRISNDILASMGEIALSSDNL--KQNIIHIYPGQDIVEKIMSFCKEGHRVATV 124
           PP S K+ R     LA++GE  + S  +    ++I I  G+D+  KIMSF ++G R   +
Sbjct: 62  PPGSGKKQR-----LAALGEWVVGSAGIGFTPHVITIAAGEDVASKIMSFSQQGPRAVCI 121

Query: 125 LSADAEATVSSATLRGPASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRLH-LT 184
           LSA+    +S+ TLR PA+    +  EGRFEILSL+G F+ +E     NGGA  R   L+
Sbjct: 122 LSANG--AISNVTLRQPATSGGTLTYEGRFEILSLSGSFMLTE-----NGGARSRTGGLS 181

Query: 185 VSMVLQDAKVIGGTVVGPLMAATRMHVVIGTL-------DPVPYKPKAEINL 224
           VS+   D +V+GG V G LMAA+ + VV+G+         P P KP+  I L
Sbjct: 182 VSLASPDGRVVGGGVAGMLMAASPVQVVVGSFISNGQKDPPKPAKPEPSIGL 221

[Close]

BLAST of CmaCh03G011790 vs. NCBI nr
Match: gi|661880962|emb|CDP15347.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 93.6 bits (231), Expect = 4.9e-16
Identity = 61/145 (42.07%), Postives = 90/145 (62.07%), Query Frame = 1


Query: 78  ILASMGEIALSS--DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSAT 137
           +LAS+GE+  S+   +   +++++Y G+D+  KI+SF ++G R   VLSA+   TVS+ T
Sbjct: 252 LLASLGELFASTAGGDFTPHVVNVYTGEDVAGKILSFAQKGPRGLCVLSAN--GTVSNVT 311

Query: 138 LRGPASE---VALEGRFEILSLTGRFVASECESAGNGGAGGRL-HLTVSMVLQDAKVIGG 197
           +R P S    +  EGRFEIL+LTG F  SE     NGG   R   L+VS+   D +VIGG
Sbjct: 312 IRQPGSSGGILTYEGRFEILTLTGSFTISE-----NGGIKSRSGGLSVSLAGPDGRVIGG 371

Query: 198 TVVGPLMAATRMHVVIGTLDPVPYK 217
            V G L+AA+ + +V+G+  P  YK
Sbjct: 372 GVAGLLLAASPIQIVVGSFMPNGYK 389

[Close]

BLAST of CmaCh03G011790 vs. NCBI nr
Match: gi|747106383|ref|XP_011101483.1| (PREDICTED: loricrin-like [Sesamum indicum])

HSP 1 Score: 90.5 bits (223), Expect = 4.2e-15
Identity = 63/160 (39.38%), Postives = 93/160 (58.13%), Query Frame = 1


Query: 78  ILASMGEIALSS--DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSAT 137
           ILAS+GE+  ++   +   +++ ++ G+D+  KI++F ++GHR   VLSA+    VS+ T
Sbjct: 170 ILASLGELFANTAGGDFTPHVVTVHTGEDVAGKILTFAQKGHRGICVLSANG--CVSNVT 229

Query: 138 LRGPASEVAL---EGRFEILSLTGRFVASECESAGNGGAGGRLH-LTVSMVLQDAKVIGG 197
           LR P S   L   EGRFEIL+LTG +  S+     NGG   R   L+VS+   D +VIGG
Sbjct: 230 LRQPGSSGGLLTYEGRFEILTLTGSYTISD-----NGGIKSRTGGLSVSLASPDGRVIGG 289

Query: 198 TVVGPLMAATRMHVVIGTLDP----VPYKPKAEINLNITP 228
            V G LMAA+ + +V+G+  P     P K K +    I P
Sbjct: 290 GVAGMLMAASPIQIVVGSFVPNGGLKPQKRKYQTEPRIAP 322

[Close]

BLAST of CmaCh03G011790 vs. NCBI nr
Match: gi|695027957|ref|XP_009401339.1| (PREDICTED: putative DNA-binding protein ESCAROLA [Musa acuminata subsp. malaccensis])

HSP 1 Score: 90.5 bits (223), Expect = 4.2e-15
Identity = 70/197 (35.53%), Postives = 104/197 (52.79%), Query Frame = 1


Query: 34  SMPNYMAVAPSTPIS----IIPTTTEDWDAFFAAPPPPSPKRLRISNDILASMGEIALSS 93
           S+    +V+ S+P +    + P+ + D        PP S K+L+        MG +  + 
Sbjct: 117 SLATAASVSSSSPTAGTGHLAPSGSADAKKKPKGRPPGSSKKLQ--------MGVLGSAG 176

Query: 94  DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSATLRGPASE---VALE 153
                +II +  G+D+  KIMS  + G R   +LSA+    +S+ TLR PA+    V  E
Sbjct: 177 TGFTPHIITVMAGEDVSSKIMSLSQHGSRAICILSANG--AISNVTLRQPATSGGTVTYE 236

Query: 154 GRFEILSLTGRFVASECESAGNGGAGGRLH-LTVSMVLQDAKVIGGTVVGPLMAATRMHV 213
           GRFEILSL+G F+ SE     +GG   R   L+VS+   D +V+GG V G LMAA+ + V
Sbjct: 237 GRFEILSLSGSFLLSE-----SGGQRSRTGGLSVSLAGPDGRVLGGGVAGLLMAASPVQV 296

Query: 214 VIGTLDPVPYKPKAEIN 223
           V+G+  PV  K   +IN
Sbjct: 297 VVGSFIPVVKKESKQIN 298

[Close]

BLAST of CmaCh03G011790 vs. NCBI nr
Match: gi|848871010|ref|XP_012836086.1| (PREDICTED: AT-hook motif nuclear-localized protein 7-like [Erythranthe guttata])

HSP 1 Score: 89.7 bits (221), Expect = 7.1e-15
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 1


Query: 77  DILASMGEIALSS--DNLKQNIIHIYPGQDIVEKIMSFCKEGHRVATVLSADAEATVSSA 136
           +ILAS+GE+  ++   +   +++ ++ G+D+  KI++F ++GHR   VLSA+   +VS+ 
Sbjct: 163 NILASLGELFANTAGGDFTPHVVTVHTGEDVAGKILTFAQKGHRGICVLSANG--SVSNV 222

Query: 137 TLRGPASEVAL---EGRFEILSLTGRFVASECESAGNGGAGGRLHLTVSMVLQDAKVIGG 196
           TLR P S   L   EGRFEIL+LTG +  S+        AGG   L+VS+   D +VIGG
Sbjct: 223 TLRQPGSSGGLLTYEGRFEILTLTGSYTVSD-SGGMKSRAGG---LSVSLASPDGRVIGG 282

Query: 197 TVVGPLMAATRMHVVIGTLDPVPYK-PKAEIN 223
            V G LMAA+ + +V+G+  P   K PK + N
Sbjct: 283 GVAGLLMAASPIQIVVGSFVPNGIKIPKRKYN 308

The following BLAST results are available for this feature:

BLAST of CmaCh03G011790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AHL9_ARATH	1.3e-13	36.00	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana GN=AHL9 PE=2 S...	[more]
AHL7_ARATH	1.8e-13	40.98	AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana GN=AHL7 PE=2 S...	[more]
AHL1_ARATH	6.7e-13	38.51	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana GN=AHL1 PE=1 S...	[more]
AHL14_ARATH	8.7e-13	35.34	AT-hook motif nuclear-localized protein 14 OS=Arabidopsis thaliana GN=AHL14 PE=1...	[more]
AHL10_ARATH	9.6e-12	33.33	AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana GN=AHL10 PE=1...	[more]

BLAST of CmaCh03G011790 vs. TrEMBL


Match Name	E-value	Identity	Description
D5AA24_PICSI	1.5e-16	40.12	Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1	[more]
A0A068V458_COFCA	3.4e-16	42.07	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00043042001 PE=4 SV=1	[more]
M0T157_MUSAM	2.9e-15	35.53	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
M0T3U0_MUSAM	1.4e-14	35.71	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]
A0A022RI74_ERYGU	1.4e-14	39.61	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a007662mg PE=4 SV=1	[more]

BLAST of CmaCh03G011790 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G45850.1	7.6e-15	36.00	AT hook motif DNA-binding family protein	[more]
AT4G00200.1	9.9e-15	40.98	AT hook motif DNA-binding family protein	[more]
AT4G12080.1	3.8e-14	38.51	AT-hook motif nuclear-localized protein 1	[more]
AT3G04590.2	4.9e-14	35.34	AT hook motif DNA-binding family protein	[more]
AT2G33620.1	5.4e-13	33.33	AT hook motif DNA-binding family protein	[more]

BLAST of CmaCh03G011790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|294461667\|gb\|ADE76393.1\|	2.2e-16	40.12	unknown [Picea sitchensis]	[more]
gi\|661880962\|emb\|CDP15347.1\|	4.9e-16	42.07	unnamed protein product [Coffea canephora]	[more]
gi\|747106383\|ref\|XP_011101483.1\|	4.2e-15	39.38	PREDICTED: loricrin-like [Sesamum indicum]	[more]
gi\|695027957\|ref\|XP_009401339.1\|	4.2e-15	35.53	PREDICTED: putative DNA-binding protein ESCAROLA [Musa acuminata subsp. malaccen...	[more]
gi\|848871010\|ref\|XP_012836086.1\|	7.1e-15	40.13	PREDICTED: AT-hook motif nuclear-localized protein 7-like [Erythranthe guttata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G011790.1	CmaCh03G011790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	DUF296	coord: 96..210 score: 8.9
IPR005175	PPC domain	PROFILE	PS51742	PPC	coord: 88..234 score: 24
None	No IPR available	GENE3D	G3DSA:3.30.1330.80		coord: 96..216 score: 1.5
None	No IPR available	PANTHER	PTHR31500	FAMILY NOT NAMED	coord: 39..209 score: 1.0
None	No IPR available	unknown	SSF117856	AF0104/ALDC/Ptd012-like	coord: 92..216 score: 1.28

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G011790	CmoCh03G011720	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G011790	Lsi01G012580	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G011790	Cp4.1LG10g04180	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G011790	Bhi03G001151	Wax gourd	cmawgoB0791

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G011790	Cucumber (Chinese Long) v3	cmacucB0788
CmaCh03G011790	Cucumber (Chinese Long) v3	cmacucB0810
CmaCh03G011790	Watermelon (97103) v2	cmawmbB671
CmaCh03G011790	Watermelon (97103) v2	cmawmbB689
CmaCh03G011790	Wax gourd	cmawgoB0771
CmaCh03G011790	Cucurbita maxima (Rimu)	cmacmaB269
CmaCh03G011790	Cucurbita maxima (Rimu)	cmacmaB521
CmaCh03G011790	Cucurbita maxima (Rimu)	cmacmaB523
CmaCh03G011790	Cucumber (Gy14) v1	cgycmaB1043
CmaCh03G011790	Cucurbita moschata (Rifu)	cmacmoB640
CmaCh03G011790	Cucurbita moschata (Rifu)	cmacmoB665
CmaCh03G011790	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G011790	Wild cucumber (PI 183967)	cmacpiB671
CmaCh03G011790	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G011790	Cucumber (Chinese Long) v2	cmacuB663
CmaCh03G011790	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G011790	Melon (DHL92) v3.5.1	cmameB600
CmaCh03G011790	Melon (DHL92) v3.5.1	cmameB609
CmaCh03G011790	Watermelon (Charleston Gray)	cmawcgB570
CmaCh03G011790	Watermelon (Charleston Gray)	cmawcgB590
CmaCh03G011790	Watermelon (97103) v1	cmawmB612
CmaCh03G011790	Watermelon (97103) v1	cmawmB639
CmaCh03G011790	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G011790	Cucurbita pepo (Zucchini)	cmacpeB681
CmaCh03G011790	Cucurbita pepo (Zucchini)	cmacpeB689
CmaCh03G011790	Bottle gourd (USVL1VR-Ls)	cmalsiB609
CmaCh03G011790	Cucumber (Gy14) v2	cgybcmaB406
CmaCh03G011790	Cucumber (Gy14) v2	cgybcmaB831
CmaCh03G011790	Melon (DHL92) v3.6.1	cmamedB684
CmaCh03G011790	Melon (DHL92) v3.6.1	cmamedB695
CmaCh03G011790	Silver-seed gourd	carcmaB0333
CmaCh03G011790	Silver-seed gourd	carcmaB0348
CmaCh03G011790	Silver-seed gourd	carcmaB1126