CmaCh03G010130 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G010130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Mitochondrial transcription termination factor family protein
Location	Cma_Chr03 : 7072273 .. 7073403 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCCAGAGCTGTGGGTTGTTTCAAGCTCTGCTATTTACTTCCTTCTAGGCAAGCATTTGCTTCCATTTTGGTAAACCAAAAATTAAAGGTTGCCTCTTGTTCAACTGTAAGTGCCAAGCAAGTTGAAGAGGAGGTGGGAGAAGGGCCGTTGGCACATGCCAATGACTCTACCGAAGTTTTCCGGAGATGGGGTTGTGCTGATGATGATATTGCACAAATCTTTGCACGTGGACCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAGATAAACTCCAACTGCTACAAGGTCTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGCTATCCTCGGTTCCTCAAATGTCGGATCAACAACAACTTCCATGAGCGGATCGAGTTCTTCTTGAAAATGTTTGAATCAAAGGAAGTTCTTATCAAAGCCATTGTAAGAAACCCTTTACTTTTGACTTCTGATTTCCATAATAAAATCAAGCCTGCAATTTCCCAGTATGAAGAATTGGGTCTCAGTAGAAAGGATTTGATTCTCATGCTTTTATCTCGCCCCACACTGATCCCAAGATCTTCATTTAATGATGAGAAGATGGGATACATACAAAAAACAGGGCTCACACATGGTGACAAGATGTACAAATACATTGTTACAATCATTGGTATCTCACGACTTGAAACCATCCGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGCTTCACAGAAGATGAGACATTCACTCTTCTTGGACGATCTCCCCTTATCTTAACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATTTTGTGCACGTTGAGGCTGCCTGCTAAGATTATTCTTAACTACCCATTTCTAGTATACTTAAACCTTGAAGAAGTCTTGAAGCCACGGGTACTTCTCTCAGAGAAGATGGAGGAAATGGGTCTCCATATTCAGATCAAAGGCGGTTTGATGCTCAGGGCTCTTAGGATGACAGAGAAGAGGTTCTTGAAGAGATTTGTTAACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAATTTTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGAAACCTCAAGGAAGAGCCATCGCAGGGGCTTTCCTTTCTGA

mRNA sequence

ATGAAATCCAGAGCTGTGGGTTGTTTCAAGCTCTGCTATTTACTTCCTTCTAGGCAAGCATTTGCTTCCATTTTGGTAAACCAAAAATTAAAGGTTGCCTCTTGTTCAACTGTAAGTGCCAAGCAAGTTGAAGAGGAGGTGGGAGAAGGGCCGTTGGCACATGCCAATGACTCTACCGAAGTTTTCCGGAGATGGGGTTGTGCTGATGATGATATTGCACAAATCTTTGCACGTGGACCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAGATAAACTCCAACTGCTACAAGGTCTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGCTATCCTCGGTTCCTCAAATGTCGGATCAACAACAACTTCCATGAGCGGATCGAGTTCTTCTTGAAAATGTTTGAATCAAAGGAAGTTCTTATCAAAGCCATTGTAAGAAACCCTTTACTTTTGACTTCTGATTTCCATAATAAAATCAAGCCTGCAATTTCCCAGTATGAAGAATTGGGTCTCAGTAGAAAGGATTTGATTCTCATGCTTTTATCTCGCCCCACACTGATCCCAAGATCTTCATTTAATGATGAGAAGATGGGATACATACAAAAAACAGGGCTCACACATGGTGACAAGATGTACAAATACATTGTTACAATCATTGGTATCTCACGACTTGAAACCATCCGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGCTTCACAGAAGATGAGACATTCACTCTTCTTGGACGATCTCCCCTTATCTTAACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATTTTGTGCACGTTGAGGCTGCCTGCTAAGATTATTCTTAACTACCCATTTCTAGTATACTTAAACCTTGAAGAAGTCTTGAAGCCACGGGTACTTCTCTCAGAGAAGATGGAGGAAATGGGTCTCCATATTCAGATCAAAGGCGGTTTGATGCTCAGGGCTCTTAGGATGACAGAGAAGAGGTTCTTGAAGAGATTTGTTAACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAATTTTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGAAACCTCAAGGAAGAGCCATCGCAGGGGCTTTCCTTTCTGA

Coding sequence (CDS)

ATGAAATCCAGAGCTGTGGGTTGTTTCAAGCTCTGCTATTTACTTCCTTCTAGGCAAGCATTTGCTTCCATTTTGGTAAACCAAAAATTAAAGGTTGCCTCTTGTTCAACTGTAAGTGCCAAGCAAGTTGAAGAGGAGGTGGGAGAAGGGCCGTTGGCACATGCCAATGACTCTACCGAAGTTTTCCGGAGATGGGGTTGTGCTGATGATGATATTGCACAAATCTTTGCACGTGGACCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAGATAAACTCCAACTGCTACAAGGTCTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGCTATCCTCGGTTCCTCAAATGTCGGATCAACAACAACTTCCATGAGCGGATCGAGTTCTTCTTGAAAATGTTTGAATCAAAGGAAGTTCTTATCAAAGCCATTGTAAGAAACCCTTTACTTTTGACTTCTGATTTCCATAATAAAATCAAGCCTGCAATTTCCCAGTATGAAGAATTGGGTCTCAGTAGAAAGGATTTGATTCTCATGCTTTTATCTCGCCCCACACTGATCCCAAGATCTTCATTTAATGATGAGAAGATGGGATACATACAAAAAACAGGGCTCACACATGGTGACAAGATGTACAAATACATTGTTACAATCATTGGTATCTCACGACTTGAAACCATCCGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGCTTCACAGAAGATGAGACATTCACTCTTCTTGGACGATCTCCCCTTATCTTAACTCTATCAGTCGATAAAGTGCAAAGGAACATGACTTTCATTTTGTGCACGTTGAGGCTGCCTGCTAAGATTATTCTTAACTACCCATTTCTAGTATACTTAAACCTTGAAGAAGTCTTGAAGCCACGGGTACTTCTCTCAGAGAAGATGGAGGAAATGGGTCTCCATATTCAGATCAAAGGCGGTTTGATGCTCAGGGCTCTTAGGATGACAGAGAAGAGGTTCTTGAAGAGATTTGTTAACAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAATTTTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGAAACCTCAAGGAAGAGCCATCGCAGGGGCTTTCCTTTCTGA

Protein sequence

MKSRAVGCFKLCYLLPSRQAFASILVNQKLKVASCSTVSAKQVEEEVGEGPLAHANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNLEEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF

Homology

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BLAST of CmaCh03G010130 vs. Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 4.0e-07
Identity = 40/217 (18.43%), Postives = 99/217 (45.62%), Query Frame = 1


Query: 90  LQDKLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVR 149
           ++ K+  L+  G+++ ++ +++   P  + C I   +   +++F  +   KE + + +V 
Sbjct: 352 MEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVV 411

Query: 150 NPLLLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEK---MGYIQKT 209
            P+L   D    I P +   +E+G+  + +  ML+  P+L+  S +   +   +  + + 
Sbjct: 412 KPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRA 471

Query: 210 GLTHGD--KMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDK 269
           G+T  D  K+      ++G S    +   +      G    +   ++   P++L  +VD 
Sbjct: 472 GVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDN 531

Query: 270 VQRNMTFILCTLRLPAKIILNYPFLVYLNLEEVLKPR 302
           ++    ++  T+  P + ++ +P     +LE  + PR
Sbjct: 532 LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPR 568

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BLAST of CmaCh03G010130 vs. Swiss-Prot
Match: MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 9.7e-06
Identity = 53/226 (23.45%), Postives = 100/226 (44.25%), Query Frame = 1


Query: 80  PSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFE- 139
           PSLR + ++ +     LL   G++ P + +I++ +P  L     +     + F       
Sbjct: 55  PSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISI 114

Query: 140 SKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDE 199
           S++ + K+I R P LL S    +++PA++  + L                          
Sbjct: 115 SEQDIPKSISRCPRLLISSVDYQLRPALTFLKTL-------------------------- 174

Query: 200 KMGYIQKTGLTHGDKMYKYIVTIIGISRLE-TIRQKVANLEK-FGFTEDETFTLLGRSPL 259
             G++ +  +T  +       T++ +S +E T+  K+  LE+  GFT +E   ++ RSP 
Sbjct: 175 --GFVGRDTITSRN-------TVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPA 234

Query: 260 ILTLSVD-KVQRNMTFILCTLRLPAKIILNYPFLVYLNLEEVLKPR 302
           +LT SVD  +   + F +  +R   K +  +P     +LE  +KPR
Sbjct: 235 LLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPR 245

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BLAST of CmaCh03G010130 vs. TrEMBL
Match: M5WH69_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007097mg PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 6.3e-121
Identity = 236/383 (61.62%), Postives = 292/383 (76.24%), Query Frame = 1


Query: 1   MKSRAVGCFKLCYLLPSRQAFASI------LVNQKLKVASCSTVSAKQVEEEVGEGPLAH 60
           M+SR     KL  LL + + F S         +     A+ ST+   Q EE VGE     
Sbjct: 1   MQSRVGSLVKLRNLLTASRNFLSFPKTLISTTSLLFPPATYSTICQAQ-EESVGEYVRDQ 60

Query: 61  ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 120
              S E+ + WGC+D DI+++F R P+LR +DL+QLQ KL +L GLGI++ +LVKIINC 
Sbjct: 61  PKSSEEILKNWGCSDTDISKMFTRRPALRNADLDQLQFKLNILSGLGISASELVKIINCR 120

Query: 121 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 180
           PRFL  RIN+ F ER+E+F+++FES+EVL+KAIV+NP LLT DFH+KIKPAI+ YE +GL
Sbjct: 121 PRFLSYRINHCFDERLEYFMRLFESREVLVKAIVKNPSLLTYDFHDKIKPAIALYEGMGL 180

Query: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240
           S  DL  +LLSRPTLIPR+SFNDEKM YI+KT L++   MYKY+V IIGISRLETIRQKV
Sbjct: 181 STSDLTQILLSRPTLIPRTSFNDEKMEYIRKTRLSNHSTMYKYVVAIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 300
           ANLEKFGF+EDE F LL RSPL+LTLS+DKVQRNMTFI+  ++LPA +IL YPF +Y NL
Sbjct: 241 ANLEKFGFSEDEIFGLLARSPLVLTLSIDKVQRNMTFIIGKMKLPAPVILEYPFFLYTNL 300

Query: 301 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 360
           E VLKPRV L+EKM+EM L +QIKG +ML ALRMTEKRFLK FVN  PKDVADELM+FY 
Sbjct: 301 EAVLKPRVFLAEKMQEMDLDLQIKGPVMLTALRMTEKRFLKAFVNCHPKDVADELMEFYI 360

Query: 361 SAKGIKRLAET-SRKSHRRGFPF 377
           +AKG+KRLAE  S+K+ ++GFPF
Sbjct: 361 NAKGVKRLAEDYSKKNFQQGFPF 382

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BLAST of CmaCh03G010130 vs. TrEMBL
Match: A0A067JM67_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22616 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.1e-115
Identity = 216/344 (62.79%), Postives = 273/344 (79.36%), Query Frame = 1


Query: 33  ASCSTVSAKQVEEEVGEGPLAHANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQD 92
           AS ST+   QVE  V EG    A +S EV R+WGC+++D+++I  R PSLR+SD   LQ 
Sbjct: 42  ASYSTIGLNQVEN-VLEGE-ERAEESVEVLRKWGCSENDLSKILTRRPSLRKSDPTHLQS 101

Query: 93  KLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPL 152
           KL LLQ LGITS DLVKIINC PRFL CRIN  F ER+E+F+ +F S+EVL+KAI+RNP 
Sbjct: 102 KLSLLQDLGITSADLVKIINCRPRFLSCRINRFFEERLEYFMTLFGSREVLLKAIIRNPS 161

Query: 153 LLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGD 212
           LLT DFHN IKPAI+ YE +G+S+KDLI MLLSRPTLIPR++F+DEKM  IQK G+    
Sbjct: 162 LLTYDFHNSIKPAIALYEGIGVSKKDLIPMLLSRPTLIPRTTFDDEKMECIQKAGIPKNS 221

Query: 213 KMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFI 272
           KMYKYIVT++G+SR+ETIR+KVAN EK+G +++E ++L GRSP +LTLSVDKVQRNMTFI
Sbjct: 222 KMYKYIVTLVGVSRIETIRKKVANFEKYGLSDEEIWSLFGRSPYLLTLSVDKVQRNMTFI 281

Query: 273 LCTLRLPAKIILNYPFLVYLNLEEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKR 332
           + T++LPAK+++ YP+L+  NLE VLKPR  L+ K++++ L  QIKG LMLRALRM E+R
Sbjct: 282 MGTMKLPAKMVIEYPYLLLCNLEIVLKPRWFLAGKLQDLNLCPQIKGPLMLRALRMKERR 341

Query: 333 FLKRFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 377
           FLK FV   PKDVA+ELM+FY+  KG+KRLAE S+KS  +GFPF
Sbjct: 342 FLKVFVWCHPKDVAEELMEFYKMTKGVKRLAEASKKSLHQGFPF 383

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BLAST of CmaCh03G010130 vs. TrEMBL
Match: B9RI01_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1574760 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 7.5e-114
Identity = 212/346 (61.27%), Postives = 273/346 (78.90%), Query Frame = 1


Query: 31  KVASCSTVSAKQVEEEVGEGPLAHANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQL 90
           K A+ ST+   QVE +  EG L    DS  V R+WGC+D D+ +I +R PSLR +DL  L
Sbjct: 40  KPATYSTLCHAQVENDT-EGGLEQPKDSIGVLRKWGCSDRDLLKILSRRPSLRNADLTHL 99

Query: 91  QDKLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRN 150
           Q KL LLQGLGI   DLVKIINC PRFL  RIN+ F ER+++F+ +F SKEVL+KAIVRN
Sbjct: 100 QSKLNLLQGLGIKPADLVKIINCRPRFLSSRINHCFDERLQYFMTLFGSKEVLLKAIVRN 159

Query: 151 PLLLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTH 210
           P LLT DFHN IKPAI+ YE +G+S+ DLI MLLSRPT+IPR+SF+D+K+ YI++TG+ +
Sbjct: 160 PSLLTYDFHNCIKPAIALYERMGVSKNDLIPMLLSRPTVIPRTSFDDQKIEYIRRTGVPN 219

Query: 211 GDKMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMT 270
             KMYKY+VTIIGIS++ETIR+KVAN EKFGF+++E +   GRSPL LTLSVDKVQRNMT
Sbjct: 220 TSKMYKYVVTIIGISKIETIREKVANFEKFGFSDEEVWRFFGRSPLFLTLSVDKVQRNMT 279

Query: 271 FILCTLRLPAKIILNYPFLVYLNLEEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTE 330
           F++ T++LPA ++L YP+L+Y NL+ VLKPR+LL+ K+++M L  QIKG L++RA+RMTE
Sbjct: 280 FVVGTMKLPANVVLQYPYLLYNNLDGVLKPRMLLAGKIQDMNLCPQIKGPLLMRAMRMTE 339

Query: 331 KRFLKRFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 377
           +RFLK FV+  P DVA+ELM FY+ AK  KRLAE+S+K   +GFPF
Sbjct: 340 QRFLKAFVSCHPTDVAEELMVFYEKAKCCKRLAESSKKMITKGFPF 384

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BLAST of CmaCh03G010130 vs. TrEMBL
Match: M5WRN4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024122mg PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 6.4e-113
Identity = 217/381 (56.96%), Postives = 281/381 (73.75%), Query Frame = 1


Query: 1   MKSRAVGCFKLCYLLPSRQAFA---SILVNQKLKVASCSTVSA--KQVEEEVGEGPLAHA 60
           MKS      KL  LLP+   F     IL+     + + +T S      E+ VGE     +
Sbjct: 1   MKSTFGSLLKLRILLPTSPNFLFLPKILLPTTWFIFTPATYSTVCHTEEDSVGEDIEDQS 60

Query: 61  NDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCYP 120
             S ++ +++GC D +I+ IF RGP L ++D NQLQ KL+ L  LGI++P+L KIIN  P
Sbjct: 61  KTSVQIMKQFGCTDTEISNIFTRGPFLLKADANQLQSKLERLTWLGISAPELAKIINDRP 120

Query: 121 RFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGLS 180
           RFL CR+N+ F ER+EF + +F SKEVL KAI+RNP  LT D H KIKP I+ YE +GLS
Sbjct: 121 RFLTCRVNHCFDERVEFLMTLFGSKEVLAKAILRNPSFLTHDLHKKIKPVIALYEGIGLS 180

Query: 181 RKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKVA 240
             DLI MLLSRPTLIPR+SFN+EKM YI KTG+ +  +M+KY+VTIIG+SRLETIRQKVA
Sbjct: 181 MPDLIQMLLSRPTLIPRTSFNEEKMEYIGKTGVPNDSRMFKYVVTIIGVSRLETIRQKVA 240

Query: 241 NLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNLE 300
           NLEKFGF+EDE F   G+SP +LTLSVDKVQRNMTFIL  ++LPA  +L +P L++ NLE
Sbjct: 241 NLEKFGFSEDEVFLFFGKSPFVLTLSVDKVQRNMTFILGEMKLPATTVLEHPSLLFKNLE 300

Query: 301 EVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQS 360
           +VLKPRVLL+ K++EMGL +QI G +M+RA+RMTE+RFLK FVN  PKD ADEL+++Y++
Sbjct: 301 DVLKPRVLLARKVQEMGLDLQINGPMMVRAMRMTERRFLKVFVNCHPKDAADELIEYYKN 360

Query: 361 AKGIKRLAETSRKSHRRGFPF 377
            KG+KRLAE S+K+ ++GFPF
Sbjct: 361 VKGVKRLAEASKKNFQKGFPF 381

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BLAST of CmaCh03G010130 vs. TrEMBL
Match: A0A0D2LRN0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G025500 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.0e-111
Identity = 204/344 (59.30%), Postives = 267/344 (77.62%), Query Frame = 1


Query: 33  ASCSTVSAKQVEEEVGEGPLAHANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQD 92
           A+ ST+   QVE    E  + H  DS EVF++WGC ++D+ +IF+R PSLR +    L  
Sbjct: 33  ATYSTICPNQVESP-NEEAIEHPRDSIEVFKQWGCCENDLLKIFSRQPSLRNAQATPLLS 92

Query: 93  KLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPL 152
           KL LL  LG+T  D+VK++NC PRF   RINN F ERIEF + +F S+E+L KA+VRNP 
Sbjct: 93  KLNLLSSLGLTGSDIVKMVNCRPRFFCSRINNCFDERIEFLVNLFGSREMLRKALVRNPS 152

Query: 153 LLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGD 212
           LLT DFHN +KP I+ YEE+G+S  DLI ML+SRPTLIPR+SFN+EKM YI+KTG+  G 
Sbjct: 153 LLTYDFHNTMKPVIALYEEIGISGHDLIAMLISRPTLIPRTSFNEEKMQYIKKTGVLKGS 212

Query: 213 KMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFI 272
           KMYKY+V++IGISR+ETIR+KV NLEKFG +E+E ++ LGRSPLILTLSVDKVQRNMTF+
Sbjct: 213 KMYKYVVSLIGISRMETIREKVTNLEKFGCSEEEIWSFLGRSPLILTLSVDKVQRNMTFV 272

Query: 273 LCTLRLPAKIILNYPFLVYLNLEEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKR 332
           L T++L  +++L +PFL++ NLE VLKPR+ L+ K++EM L+ QIKG + LRALRMTE R
Sbjct: 273 LGTMKLSPRVVLEHPFLLFSNLETVLKPRISLARKLKEMELYPQIKGSITLRALRMTENR 332

Query: 333 FLKRFVNSQPKDVADELMQFYQSAKGIKRLAETSRKSHRRGFPF 377
           FL  F+   P+DVA+EL++FY+ AKG+K LAE+S+K  R+GFPF
Sbjct: 333 FLNVFIKCHPQDVANELLEFYKHAKGLKPLAESSKKILRKGFPF 375

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BLAST of CmaCh03G010130 vs. TAIR10
Match: AT1G79220.1 (AT1G79220.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 349.0 bits (894), Expect = 3.7e-96
Identity = 183/369 (49.59%), Postives = 258/369 (69.92%), Query Frame = 1


Query: 8   CFKLCYLLPSRQAFASILVNQKLKVASCSTVSAKQVEEEVGEGPLAHANDSTEVFRRWGC 67
           C  LC          S L +++ K      V  K+   ++   PL       +V RRWGC
Sbjct: 40  CSTLCLNESEECIEDSDLSSRRKKFDYVGEVGEKEKVRDITSSPL-------QVLRRWGC 99

Query: 68  ADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFH 127
            DD+I+++F R P+L+R+++ QL+ KL LL+ LGITS DLVKI+NC PRF  CR+     
Sbjct: 100 DDDEISKLFTRRPALQRANVAQLEFKLSLLKPLGITSSDLVKILNCRPRFFSCRLV--LD 159

Query: 128 ERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRP 187
           ERI +F+++  SKEVL + I+RNP L+  D  +KIKPAI  Y+ LG S++DL+ ML+SRP
Sbjct: 160 ERINYFMEILGSKEVLRRVIIRNPSLMLYDLDDKIKPAIEYYKGLGFSQQDLVAMLISRP 219

Query: 188 TLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKVANLEKFGFTEDET 247
           TLIPR++FN+EK  YI+KTG+T   KM+KY+  IIG+SR+ETI +KV NLEKFGF+E+E 
Sbjct: 220 TLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVIIGVSRMETIEEKVRNLEKFGFSEEEI 279

Query: 248 FTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNLEEVLKPRVLLSEK 307
           + L G+ P++L+LSV+KVQRNMTF++ +++LPA  ++ +P L+ LNLE  LKPR  L ++
Sbjct: 280 WHLYGKCPILLSLSVEKVQRNMTFVIASMKLPAHSVVKHPCLLLLNLESRLKPRADLVKR 339

Query: 308 MEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQSAKGIKRLAETSR 367
           + EM L   IK   + RA+RM+EKRFLK +V   P+D+A ELM+FY+ +K +KRLAE S+
Sbjct: 340 VLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVMCHPQDIATELMEFYEKSKNMKRLAEKSK 399

Query: 368 KSHRRGFPF 377
           K  R+GFPF
Sbjct: 400 KYIRKGFPF 399

[Close]

BLAST of CmaCh03G010130 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13
Identity = 68/273 (24.91%), Postives = 128/273 (46.89%), Query Frame = 1


Query: 90  LQDKLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVR 149
           L+ KL+  + +G T   L K ++     +   +       +E    +   K   +  I+ 
Sbjct: 107 LEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILS 166

Query: 150 NP--LLLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKM-GYIQKT 209
               LLL+ D +  + P IS  E  G+    L  +L  +P +    + ++EK+ GY+ + 
Sbjct: 167 RCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPRIF---NLSEEKLRGYVSRA 226

Query: 210 ---GLTHGDKMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVD 269
              G T   +M  + V  +     +T  +KV      GF+EDE   ++ RSP ++  S D
Sbjct: 227 LDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSED 286

Query: 270 KVQRNMTFILCTLRLPAKIILNYPFLVYLNLEEVLKPRVLLSEKMEEMGLHI--QIKGGL 329
           K+     F L  + L  + +   P ++  NLE+ + PR+ + + + E GL +  + K   
Sbjct: 287 KLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKN 346

Query: 330 MLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 355
           M+  + MTE+ FL+++V     ++A+EL+  Y+
Sbjct: 347 MVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376

[Close]

BLAST of CmaCh03G010130 vs. TAIR10
Match: AT1G61990.1 (AT1G61990.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 66.2 bits (160), Expect = 4.8e-11
Identity = 68/305 (22.30%), Postives = 134/305 (43.93%), Query Frame = 1


Query: 40  AKQVEEEVGEGPLAHANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQ-LQDKLQLLQ 99
           A+ +  +V      + +    +FR +G  D  I+ I    P L  +D  + L  KLQ+LQ
Sbjct: 69  AESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQ 128

Query: 100 GLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDF 159
             G +S ++ +I++  PR L  +    +++ +         K++++     +  L     
Sbjct: 129 SRGASSSEITEIVSTVPRILGKKSITVYYDAV---------KDIIVADTSSSYELPQGSQ 188

Query: 160 HNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYI 219
            NKI+  +S   ELG+  + L+ +L+S+   +      D  +  + + G       +   
Sbjct: 189 GNKIR-NVSALRELGMPSRLLLPLLVSKSQPVCGKENFDASLKKVVEMGFDPTTTKFVLA 248

Query: 220 VTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRL 279
           + ++     +TI +KV      GFT D+ + +  ++P +L +S  K+ ++    L     
Sbjct: 249 LRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYS 308

Query: 280 PAKIIL---NYPFLVYLNLEEVLKPRVLLSEKME----EMGLHIQIKGGLMLRALRMTEK 337
            A+ ++    YP  +  ++E V K    L +KM+     + LH Q+ G  M       EK
Sbjct: 309 RAEFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSM-------EK 356

[Close]

BLAST of CmaCh03G010130 vs. TAIR10
Match: AT1G62110.1 (AT1G62110.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 59.3 bits (142), Expect = 5.9e-09
Identity = 48/208 (23.08%), Postives = 95/208 (45.67%), Query Frame = 1


Query: 61  VFRRWGCADDDIAQIFARGPSLRRSDLNQLQD-KLQLLQGLGITSPDLVKIINCYPRFLK 120
           +FR +G  +  I+ I    P L   D  +  D KLQ L+  G +SP+L +I++  P+ L 
Sbjct: 90  LFRSYGFTNSQISSIITDYPRLLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILG 149

Query: 121 CRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGLSRKDL 180
            +   +     +F  ++ E+ +      +  PL   +   NKI+  +S   +LG+ +K L
Sbjct: 150 MKEGKSLGRYYDFVKEIIEADKSSKYETLCQPLPEANRQGNKIR-NVSVLRDLGVPQKLL 209

Query: 181 ILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRL--ETIRQKVANL 240
             +L+S    +      +E +  + + G        K++  +  + R   +TI ++V   
Sbjct: 210 FSLLISDAQPVCGKENFEESLKKVVEMGF--DPTTSKFVQALRAVYRFTDKTIEERVNVY 269

Query: 241 EKFGFTEDETFTLLGRSPLILTLSVDKV 266
           + FGF  ++ + +  + P  L  S  K+
Sbjct: 270 KGFGFAVEDVWAMFKKCPYFLNSSEKKI 294

[Close]

BLAST of CmaCh03G010130 vs. TAIR10
Match: AT2G21710.1 (AT2G21710.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 57.4 bits (137), Expect = 2.2e-08
Identity = 40/217 (18.43%), Postives = 99/217 (45.62%), Query Frame = 1


Query: 90  LQDKLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVR 149
           ++ K+  L+  G+++ ++ +++   P  + C I   +   +++F  +   KE + + +V 
Sbjct: 352 MEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVV 411

Query: 150 NPLLLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEK---MGYIQKT 209
            P+L   D    I P +   +E+G+  + +  ML+  P+L+  S +   +   +  + + 
Sbjct: 412 KPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRA 471

Query: 210 GLTHGD--KMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDK 269
           G+T  D  K+      ++G S    +   +      G    +   ++   P++L  +VD 
Sbjct: 472 GVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDN 531

Query: 270 VQRNMTFILCTLRLPAKIILNYPFLVYLNLEEVLKPR 302
           ++    ++  T+  P + ++ +P     +LE  + PR
Sbjct: 532 LRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPR 568

[Close]

BLAST of CmaCh03G010130 vs. NCBI nr
Match: gi|659079328|ref|XP_008440198.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484733 [Cucumis melo])

HSP 1 Score: 479.2 bits (1232), Expect = 6.7e-132
Identity = 262/378 (69.31%), Postives = 302/378 (79.89%), Query Frame = 1


Query: 1   MKSRAVGCFKLCYLLPSRQAFASILVNQ------KLKVASCSTVSAKQVEEEVGEGPLAH 60
           MKSR +  FK  YLL SRQA  SILVNQ      KLKVA+CST+S K+VEE    G LAH
Sbjct: 1   MKSRVMDYFKHRYLLSSRQACVSILVNQPLEDWQKLKVATCSTLSVKKVEE----GTLAH 60

Query: 61  ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 120
           AND TEV RRWGC D+DIAQIFA G SL RS+ NQLQ+ L LL GLGITSPDLVK+INC 
Sbjct: 61  ANDYTEVLRRWGCTDNDIAQIFAHGSSLHRSETNQLQNNLHLLXGLGITSPDLVKVINCR 120

Query: 121 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 180
           P FL+C INN FHERIEFFL+MFESKEVL+KAI+R+P           KP +SQYEE+GL
Sbjct: 121 PWFLECPINN-FHERIEFFLQMFESKEVLVKAILRDPX----------KPVLSQYEEIGL 180

Query: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240
           S+KDL+ MLL  PTLIPR+SFN+EKM +IQKTGL+ GDK++KY+VTII ISRLETIRQKV
Sbjct: 181 SKKDLVCMLLLYPTLIPRTSFNNEKMEFIQKTGLSQGDKLFKYVVTIICISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 300
           ANL+KFGFTEDE F L+ R PLILTLSVDKVQRNMTFIL ++ LPAK++L+YPFL+  NL
Sbjct: 241 ANLKKFGFTEDEKFALIRRCPLILTLSVDKVQRNMTFILYSMELPAKVVLHYPFLLRFNL 300

Query: 301 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 360
           E V   R+LL+ K+EEMGLH+QIKG  +L ALRM E RFLK+FV SQP+DVADELMQFYQ
Sbjct: 301 EAV---RMLLAGKVEEMGLHLQIKGRSILSALRMPENRFLKKFVYSQPQDVADELMQFYQ 360

Query: 361 SAKGIKRLAETSRKSHRR 373
            AK IK LAETSRK+  R
Sbjct: 361 RAKAIKCLAETSRKNRNR 360

[Close]

BLAST of CmaCh03G010130 vs. NCBI nr
Match: gi|645239439|ref|XP_008226127.1| (PREDICTED: uncharacterized protein LOC103325722 [Prunus mume])

HSP 1 Score: 445.3 bits (1144), Expect = 1.1e-121
Identity = 227/345 (65.80%), Postives = 282/345 (81.74%), Query Frame = 1


Query: 33  ASCSTVSAKQVEEEVGEGPLAHANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQD 92
           A+ ST+   Q EE VGE       +S E+ + WGC+D DI+++F R P+LR +DL+QLQ 
Sbjct: 39  ATYSTICQAQ-EESVGEYVRDQPKNSEEILKNWGCSDTDISKMFTRRPALRNADLDQLQF 98

Query: 93  KLQLLQGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPL 152
           KL +L GLGI++ +LVKIINC PRFL  RIN+ F ER+E+F+++FES+EVL+KAIV+NP 
Sbjct: 99  KLNILSGLGISASELVKIINCRPRFLSNRINHCFDERLEYFMRLFESREVLVKAIVKNPS 158

Query: 153 LLTSDFHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGD 212
           LLT DFH+KIKPAI+ YE +GLS  DL  +LLSRPTLIPR+SFNDEKM YI+KT L++  
Sbjct: 159 LLTYDFHDKIKPAIALYEGMGLSTSDLTQLLLSRPTLIPRTSFNDEKMEYIRKTRLSNHS 218

Query: 213 KMYKYIVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFI 272
            MYKY+V IIGISRLETIRQKVANLEKFGF+EDE F LL RSPL+LTLS+DKVQRNMTFI
Sbjct: 219 TMYKYVVAIIGISRLETIRQKVANLEKFGFSEDEIFGLLARSPLVLTLSIDKVQRNMTFI 278

Query: 273 LCTLRLPAKIILNYPFLVYLNLEEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKR 332
           +  ++LPA ++L YPF +Y NLE VLKPRV L+EKM+EMGL +QI+G +MLRALRMTEKR
Sbjct: 279 IGKMKLPAPVVLEYPFFLYTNLEAVLKPRVFLAEKMQEMGLDLQIEGPMMLRALRMTEKR 338

Query: 333 FLKRFVNSQPKDVADELMQFYQSAKGIKRLAET-SRKSHRRGFPF 377
           FLK FVN  PKDVADELM+FY +AKG+KRLAE  S+K+ ++GFPF
Sbjct: 339 FLKAFVNCHPKDVADELMEFYINAKGVKRLAEDYSKKNFQQGFPF 382

[Close]

BLAST of CmaCh03G010130 vs. NCBI nr
Match: gi|595862584|ref|XP_007211427.1| (hypothetical protein PRUPE_ppa007097mg [Prunus persica])

HSP 1 Score: 442.2 bits (1136), Expect = 9.1e-121
Identity = 236/383 (61.62%), Postives = 292/383 (76.24%), Query Frame = 1


Query: 1   MKSRAVGCFKLCYLLPSRQAFASI------LVNQKLKVASCSTVSAKQVEEEVGEGPLAH 60
           M+SR     KL  LL + + F S         +     A+ ST+   Q EE VGE     
Sbjct: 1   MQSRVGSLVKLRNLLTASRNFLSFPKTLISTTSLLFPPATYSTICQAQ-EESVGEYVRDQ 60

Query: 61  ANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCY 120
              S E+ + WGC+D DI+++F R P+LR +DL+QLQ KL +L GLGI++ +LVKIINC 
Sbjct: 61  PKSSEEILKNWGCSDTDISKMFTRRPALRNADLDQLQFKLNILSGLGISASELVKIINCR 120

Query: 121 PRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGL 180
           PRFL  RIN+ F ER+E+F+++FES+EVL+KAIV+NP LLT DFH+KIKPAI+ YE +GL
Sbjct: 121 PRFLSYRINHCFDERLEYFMRLFESREVLVKAIVKNPSLLTYDFHDKIKPAIALYEGMGL 180

Query: 181 SRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKV 240
           S  DL  +LLSRPTLIPR+SFNDEKM YI+KT L++   MYKY+V IIGISRLETIRQKV
Sbjct: 181 STSDLTQILLSRPTLIPRTSFNDEKMEYIRKTRLSNHSTMYKYVVAIIGISRLETIRQKV 240

Query: 241 ANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNL 300
           ANLEKFGF+EDE F LL RSPL+LTLS+DKVQRNMTFI+  ++LPA +IL YPF +Y NL
Sbjct: 241 ANLEKFGFSEDEIFGLLARSPLVLTLSIDKVQRNMTFIIGKMKLPAPVILEYPFFLYTNL 300

Query: 301 EEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQ 360
           E VLKPRV L+EKM+EM L +QIKG +ML ALRMTEKRFLK FVN  PKDVADELM+FY 
Sbjct: 301 EAVLKPRVFLAEKMQEMDLDLQIKGPVMLTALRMTEKRFLKAFVNCHPKDVADELMEFYI 360

Query: 361 SAKGIKRLAET-SRKSHRRGFPF 377
           +AKG+KRLAE  S+K+ ++GFPF
Sbjct: 361 NAKGVKRLAEDYSKKNFQQGFPF 382

[Close]

BLAST of CmaCh03G010130 vs. NCBI nr
Match: gi|470145257|ref|XP_004308258.1| (PREDICTED: uncharacterized protein LOC101301828 [Fragaria vesca subsp. vesca])

HSP 1 Score: 427.6 bits (1098), Expect = 2.3e-116
Identity = 221/381 (58.01%), Postives = 284/381 (74.54%), Query Frame = 1


Query: 1   MKSRAVGCFKLCYLLP-----SRQAFASILVNQKLKVASCSTVSAKQVEEEVGEGPLAHA 60
           MKSR    FKLC + P     S    +S+         + STV   Q EE + E      
Sbjct: 1   MKSRVGSLFKLCIVFPVSCNRSPMPKSSLPSCLSFVHTTFSTVCLTQ-EESIVEDTFDQP 60

Query: 61  NDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLLQGLGITSPDLVKIINCYP 120
             S EV  +WGC + DI+Q+F R P+LR++DLNQLQ KL LL  LGIT+PDL+KII+C P
Sbjct: 61  KTSAEVLEKWGCCEADISQLFKRRPALRKADLNQLQYKLNLLSELGITAPDLLKIIDCRP 120

Query: 121 RFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSDFHNKIKPAISQYEELGLS 180
           R L  RI++ F ER +FF+K+F S+E+L+KAIVRNP LL  DFHNK+KP I+ YE +GLS
Sbjct: 121 RLLSLRIDHCFDERHKFFMKIFGSRELLVKAIVRNPSLLIYDFHNKVKPTIALYEGMGLS 180

Query: 181 RKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKYIVTIIGISRLETIRQKVA 240
           R++L+ MLLSRPTLIPR+ FNDEK+ YIQKTGL++  +MYKY+VT+IGISRLETI ++++
Sbjct: 181 REELVPMLLSRPTLIPRTVFNDEKVEYIQKTGLSNKSRMYKYVVTLIGISRLETISERIS 240

Query: 241 NLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLRLPAKIILNYPFLVYLNLE 300
           N EKFGF+EDE F+L+GRSPL+  LSVDKVQRNMTF+L  ++LPA +IL +PFL+Y+NLE
Sbjct: 241 NFEKFGFSEDEIFSLMGRSPLVFFLSVDKVQRNMTFVLGQMKLPATVILAHPFLLYMNLE 300

Query: 301 EVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRFVNSQPKDVADELMQFYQS 360
             LKPRV L+ K+E+MGL  QIKG  +L ALRMTEKRF+K F+N  PKDVAD+LM++Y  
Sbjct: 301 TALKPRVCLAGKIEDMGLDEQIKGPKLLTALRMTEKRFVKAFINCHPKDVADQLMEYYTK 360

Query: 361 AKGIKRLAETSRKSHRRGFPF 377
           AKG+KRLAE S+K    GFP+
Sbjct: 361 AKGVKRLAEASKKKSNEGFPY 380

[Close]

BLAST of CmaCh03G010130 vs. NCBI nr
Match: gi|694428242|ref|XP_009341702.1| (PREDICTED: uncharacterized protein LOC103933738 [Pyrus x bretschneideri])

HSP 1 Score: 427.2 bits (1097), Expect = 3.0e-116
Identity = 219/340 (64.41%), Postives = 265/340 (77.94%), Query Frame = 1


Query: 38  VSAKQVEEEVGEGPLAHANDSTEVFRRWGCADDDIAQIFARGPSLRRSDLNQLQDKLQLL 97
           V  + VE ++ + P     +S EV R WGC+D DI+++F R P LR +DLNQLQ KL +L
Sbjct: 50  VQEESVEVDIRDQP----KNSAEVLRNWGCSDTDISKMFTRRPVLRSTDLNQLQSKLNVL 109

Query: 98  QGLGITSPDLVKIINCYPRFLKCRINNNFHERIEFFLKMFESKEVLIKAIVRNPLLLTSD 157
            GLGIT+P LVKIINCYPRFL  R N+   ER+EFF+++FES+EVL+KAIVRNP LL  D
Sbjct: 110 SGLGITAPQLVKIINCYPRFLSYRFNHCIDERLEFFMRLFESREVLVKAIVRNPSLLIYD 169

Query: 158 FHNKIKPAISQYEELGLSRKDLILMLLSRPTLIPRSSFNDEKMGYIQKTGLTHGDKMYKY 217
            HNKIKP I  YE +GLS +DLI MLL R TLIPR+SFNDEKM YI+KT L+   +MYKY
Sbjct: 170 LHNKIKPVIKLYEGIGLSMEDLIQMLLQRATLIPRTSFNDEKMEYIRKTRLSTDSRMYKY 229

Query: 218 IVTIIGISRLETIRQKVANLEKFGFTEDETFTLLGRSPLILTLSVDKVQRNMTFILCTLR 277
           +VTIIGISRLET+ QK++N EKFGF+EDE F LLG SPL+ TLSVDKVQRNMTFI+  ++
Sbjct: 230 VVTIIGISRLETLSQKISNFEKFGFSEDEIFGLLGSSPLVFTLSVDKVQRNMTFIIGKMK 289

Query: 278 LPAKIILNYPFLVYLNLEEVLKPRVLLSEKMEEMGLHIQIKGGLMLRALRMTEKRFLKRF 337
            PAK+IL  PFL+Y NLE VLKPRV L  K++EMGL +QIKG  ML ALRMTEKRFLK F
Sbjct: 290 FPAKVILQNPFLLYSNLEAVLKPRVFLVGKIQEMGLDLQIKGPRMLTALRMTEKRFLKAF 349

Query: 338 VNSQPKDVADELMQFYQSAKGIKRLAET-SRKSHRRGFPF 377
           +N  PKDVADELM+FY +AK +KRLAE  S+K+  +GFPF
Sbjct: 350 INCHPKDVADELMEFYTNAKSVKRLAEDYSKKNFHQGFPF 385

The following BLAST results are available for this feature:

BLAST of CmaCh03G010130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MTEF2_ARATH	4.0e-07	18.43	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana G...	[more]
MTEF1_ARATH	9.7e-06	23.45	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana GN...	[more]

BLAST of CmaCh03G010130 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WH69_PRUPE	6.3e-121	61.62	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007097mg PE=4 SV=1	[more]
A0A067JM67_JATCU	3.1e-115	62.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22616 PE=4 SV=1	[more]
B9RI01_RICCO	7.5e-114	61.27	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1574760 PE=4 SV=1	[more]
M5WRN4_PRUPE	6.4e-113	56.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024122mg PE=4 SV=1	[more]
A0A0D2LRN0_GOSRA	2.0e-111	59.30	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G025500 PE=4 SV=1	[more]

BLAST of CmaCh03G010130 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79220.1	3.7e-96	49.59	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	1.3e-13	24.91	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	4.8e-11	22.30	Mitochondrial transcription termination factor family protein	[more]
AT1G62110.1	5.9e-09	23.08	Mitochondrial transcription termination factor family protein	[more]
AT2G21710.1	2.2e-08	18.43	Mitochondrial transcription termination factor family protein	[more]

BLAST of CmaCh03G010130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079328\|ref\|XP_008440198.1\|	6.7e-132	69.31	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103484733 [Cucumis me...	[more]
gi\|645239439\|ref\|XP_008226127.1\|	1.1e-121	65.80	PREDICTED: uncharacterized protein LOC103325722 [Prunus mume]	[more]
gi\|595862584\|ref\|XP_007211427.1\|	9.1e-121	61.62	hypothetical protein PRUPE_ppa007097mg [Prunus persica]	[more]
gi\|470145257\|ref\|XP_004308258.1\|	2.3e-116	58.01	PREDICTED: uncharacterized protein LOC101301828 [Fragaria vesca subsp. vesca]	[more]
gi\|694428242\|ref\|XP_009341702.1\|	3.0e-116	64.41	PREDICTED: uncharacterized protein LOC103933738 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003690	MTERF

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G010130.1	CmaCh03G010130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 61..188 score: 3.5E-22coord: 140..333 score: 4.6
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 248..279 score: 220.0coord: 108..140 score: 45.0coord: 144..175 score: 1.0coord: 73..103 score: 510.0coord: 212..243 score: 540.0coord: 280..314 score: 1
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 54..371 score: 1.5E
None	No IPR available	PANTHER	PTHR13068:SF21	MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 54..371 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G010130	Cucsa.102020	Cucumber (Gy14) v1	cgycmaB0231
CmaCh03G010130	Cla001805	Watermelon (97103) v1	cmawmB632
CmaCh03G010130	Csa6G489920	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G010130	MELO3C007519	Melon (DHL92) v3.5.1	cmameB617
CmaCh03G010130	CSPI06G27630	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G010130	Lsi01G010220	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G010130	Cp4.1LG10g03020	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G010130	MELO3C007519.2	Melon (DHL92) v3.6.1	cmamedB703
CmaCh03G010130	CsaV3_6G042780	Cucumber (Chinese Long) v3	cmacucB0809
CmaCh03G010130	Cla97C01G015480	Watermelon (97103) v2	cmawmbB670
CmaCh03G010130	Bhi03G001490	Wax gourd	cmawgoB0790
CmaCh03G010130	CsGy6G027100	Cucumber (Gy14) v2	cgybcmaB831
CmaCh03G010130	Carg00870	Silver-seed gourd	carcmaB0567

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G010130	Watermelon (97103) v2	cmawmbB681
CmaCh03G010130	Watermelon (97103) v2	cmawmbB702
CmaCh03G010130	Wax gourd	cmawgoB0782
CmaCh03G010130	Cucurbita maxima (Rimu)	cmacmaB063
CmaCh03G010130	Cucurbita maxima (Rimu)	cmacmaB188
CmaCh03G010130	Cucurbita maxima (Rimu)	cmacmaB517
CmaCh03G010130	Cucurbita maxima (Rimu)	cmacmaB523
CmaCh03G010130	Cucumber (Gy14) v1	cgycmaB0641
CmaCh03G010130	Cucurbita moschata (Rifu)	cmacmoB632
CmaCh03G010130	Cucurbita moschata (Rifu)	cmacmoB636
CmaCh03G010130	Cucurbita moschata (Rifu)	cmacmoB646
CmaCh03G010130	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G010130	Cucurbita moschata (Rifu)	cmacmoB662
CmaCh03G010130	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G010130	Wild cucumber (PI 183967)	cmacpiB659
CmaCh03G010130	Wild cucumber (PI 183967)	cmacpiB662
CmaCh03G010130	Cucumber (Chinese Long) v2	cmacuB653
CmaCh03G010130	Cucumber (Chinese Long) v2	cmacuB654
CmaCh03G010130	Melon (DHL92) v3.5.1	cmameB590
CmaCh03G010130	Melon (DHL92) v3.5.1	cmameB599
CmaCh03G010130	Watermelon (Charleston Gray)	cmawcgB579
CmaCh03G010130	Watermelon (Charleston Gray)	cmawcgB598
CmaCh03G010130	Watermelon (Charleston Gray)	cmawcgB604
CmaCh03G010130	Watermelon (97103) v1	cmawmB621
CmaCh03G010130	Cucurbita pepo (Zucchini)	cmacpeB679
CmaCh03G010130	Cucurbita pepo (Zucchini)	cmacpeB660
CmaCh03G010130	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G010130	Cucurbita pepo (Zucchini)	cmacpeB687
CmaCh03G010130	Cucumber (Gy14) v2	cgybcmaB239
CmaCh03G010130	Melon (DHL92) v3.6.1	cmamedB675
CmaCh03G010130	Melon (DHL92) v3.6.1	cmamedB683
CmaCh03G010130	Silver-seed gourd	carcmaB0254
CmaCh03G010130	Silver-seed gourd	carcmaB1125
CmaCh03G010130	Cucumber (Chinese Long) v3	cmacucB0777
CmaCh03G010130	Cucumber (Chinese Long) v3	cmacucB0780
CmaCh03G010130	Cucumber (Chinese Long) v3	cmacucB0782