CmaCh03G008210 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G008210
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	HD domain class transcription factor
Location	Cma_Chr03 : 6250002 .. 6252188 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTTGAGATGAATTTGGTTCTGGCAAACCGCAGTGAACCCAACCCTAGTTAGATTCCAACCCTACTTTCTGACACGAGTTGGATTATTTAAAGACAGAGAAAGTATTAGACTAATCGTAATTGAGCTGCACACTCCCCCTCTCCTCCTCCTCCTCCTCCTCCTCCTATTTCATTTTCTAGAGCTTCTCCCTCAACCCACGATCTCTAATAATGCAGTAGAGAGAGAAACAAGAGAGAGAACGAGAGAAAAATATCATTTTGGGCAATCGATCATCATCATCATCTTCTTCTTCTTCTGCGGGCTGGGTTGGATTTTGATATTTTTGTTTCCATTTTGAGGATCGATTGGAATTGGGTTTTGTTTTCTGGACTTTTCTTTTGATGGGTTCAGAGAAGGAAGGAGAATCGAAGACCAAGAAAGATCCAGGGGAAACAGGGGAAGTAACTGGGAACTTGTACAGAGTCGGCCTTGTTTCACATCTGGAACGTCCTCTGCTTCTTCCTACAACTCTATTCCTTTCTGCTACTTTGAACCACTCTTTCAGTTCCTAACAATCCCTCGCTACGCTTCTAACAAATCACGCCTCCAAGCTTTTAGGGTTCACTTGAATACAAGGATCTCATCATATTTTGGGAGCTGTTTTTTTTAATCTCTTCCGTCATGAAGAGACATGGCAGCTCAGATTCGTTGGGCGCTCTGATGTCTGTGTGTCCTACTTCAGGTTTAAATATAATCAACAATTTTGTTTTATATATCTTCATTTCTTTATTCTTCTTCTGCTGCTTAATTTCCATTTTCCCGACACCCCCATGTGAATTTTTCTTTTCTTTTCTTTTCTTTCTTGTCTCTTGTTAAAACCCAATAACTCGCAGGAATCTTTACGAAACACGCTCTTGCTTGCAGATGAACAGAGTCCGAGGAACAGCCATGTTTATGGCAGGGAATTTCAGTCGATGTTGGACGGGTTGGACGAAGAAGGCTCCATGGAAGAACAGTGTCATGTGGGAGAGAAGAAAAGGAGACTCAGTGTTGATCAAGTTAAGGCCTTGGAGAAAACATTCGAGATTGAAAACAAGCTGGAACCAGATAGGAAAGTGAAGCTTGCTCTAGAACTTGGCCTGCAGCCAAGGCAAGTTGCTGTATGGTTCCAAAACCGTAGAGCCCGATGGAAAACTAAGCAACTGGAGAGAGATTATGGGCTTCTGAAAGCCAATTACGAAACTCTCAAGCGTAGTTTCGATACCCTTCAGAAGGACAATGATGGTCTGCTCAAAGAGGTCGATAATTGTAAAATCCCAGAGAGTTTTTGTTCTAAATGTTGAAGTTTTGTTTTTCCCCCAATTCACCTGTCTCTGTTTTATAGATTAAAGAATTGAAATTGAAGCTCGAGGAAGAGAAGACAGAGAGGCATTTATCAGTGAAGGAAGAGATTTTCGTGCCAGAATCGGGCAATTTACTTATTGAGCAGACGAACAATCATCTTTCGGTGGATCATGTTCCTCTTCCTGTTTCTTCGGATCATTCCGACGACTTCAACTACGAGAGCTTCAGAATAGCAAGCGCCGAGGATGGGGACGAACAAAGAGTTAAAGTATCGTTGTTCCCTGATTTTAAAGATGGGTCATCGGACAGCGACTCAAGCGCCATATTAAACGAAGACAACAGCCCAAACGCCGTCGTATCGTCCACGGCCGCCGGGATGCTCCAAAGCAAACAGCAAATTCTGTCGTCTCCGACGTCGTCTTTGAACTGGTTCCCGTATCAAAAGGCAGCAGCTTATAATAATGCACAACAATACGTGAAAATCGAAGAGTACAATTTCTTCAGCGGAGAAGAGAGCTGTGATTTGTTCTCCGATGAACAAGCGCCGTCTATGCATTGGTACTGCCCCGATGAGTGGAACTAAAAGCAATTCCAATCATGAGAGTGAAATCTAGCGTGGGAATTGGCACGGTGGGATTGGTCGGAGAGGGAACAGGTGGCGGCTCAGAGTGTTGATTGGAGTGAAGCTGTAAAGATTGATGGTGGGTGGGATGATTAGAAAGAACAAATGTTGTAATGAACAAATAATGATTCCCTTGGGCTTTTTCCCCCCTTTCATTTCTAAACCATTTTTATGCCCTAGATTCCTATAATATTTGTACTTCACTAAATTAAATCCATCTTTGGTGAATATTTTGAAAA

mRNA sequence

GAATTTGAGATGAATTTGGTTCTGGCAAACCGCAGTGAACCCAACCCTAGTTAGATTCCAACCCTACTTTCTGACACGAGTTGGATTATTTAAAGACAGAGAAAGTATTAGACTAATCGTAATTGAGCTGCACACTCCCCCTCTCCTCCTCCTCCTCCTCCTCCTCCTATTTCATTTTCTAGAGCTTCTCCCTCAACCCACGATCTCTAATAATGCAGTAGAGAGAGAAACAAGAGAGAGAACGAGAGAAAAATATCATTTTGGGCAATCGATCATCATCATCATCTTCTTCTTCTTCTGCGGGCTGGGTTGGATTTTGATATTTTTGTTTCCATTTTGAGGATCGATTGGAATTGGGTTTTGTTTTCTGGACTTTTCTTTTGATGGGTTCAGAGAAGGAAGGAGAATCGAAGACCAAGAAAGATCCAGGGGAAACAGGGGAAGTAACTGGGAACTTGTACAGAGTCGGCCTTGTTTCACATCTGGAACGTCCTCTGCTTCTTCCTACAACTCTATTCCTTTCTGCTACTTTGAACCACTCTTTCAGTTCCTAACAATCCCTCGCTACGCTTCTAACAAATCACGCCTCCAAGCTTTTAGGGTTCACTTGAATACAAGGATCTCATCATATTTTGGGAGCTGTTTTTTTTAATCTCTTCCGTCATGAAGAGACATGGCAGCTCAGATTCGTTGGGCGCTCTGATGTCTGTGTGTCCTACTTCAGATGAACAGAGTCCGAGGAACAGCCATGTTTATGGCAGGGAATTTCAGTCGATGTTGGACGGGTTGGACGAAGAAGGCTCCATGGAAGAACAGTGTCATGTGGGAGAGAAGAAAAGGAGACTCAGTGTTGATCAAGTTAAGGCCTTGGAGAAAACATTCGAGATTGAAAACAAGCTGGAACCAGATAGGAAAGTGAAGCTTGCTCTAGAACTTGGCCTGCAGCCAAGGCAAGTTGCTGTATGGTTCCAAAACCGTAGAGCCCGATGGAAAACTAAGCAACTGGAGAGAGATTATGGGCTTCTGAAAGCCAATTACGAAACTCTCAAGCGTAGTTTCGATACCCTTCAGAAGGACAATGATGGTCTGCTCAAAGAGATTAAAGAATTGAAATTGAAGCTCGAGGAAGAGAAGACAGAGAGGCATTTATCAGTGAAGGAAGAGATTTTCGTGCCAGAATCGGGCAATTTACTTATTGAGCAGACGAACAATCATCTTTCGGTGGATCATGTTCCTCTTCCTGTTTCTTCGGATCATTCCGACGACTTCAACTACGAGAGCTTCAGAATAGCAAGCGCCGAGGATGGGGACGAACAAAGAGTTAAAGTATCGTTGTTCCCTGATTTTAAAGATGGGTCATCGGACAGCGACTCAAGCGCCATATTAAACGAAGACAACAGCCCAAACGCCGTCGTATCGTCCACGGCCGCCGGGATGCTCCAAAGCAAACAGCAAATTCTGTCGTCTCCGACGTCGTCTTTGAACTGGTTCCCGTATCAAAAGGCAGCAGCTTATAATAATGCACAACAATACGTGAAAATCGAAGAGTACAATTTCTTCAGCGGAGAAGAGAGCTGTGATTTGTTCTCCGATGAACAAGCGCCGTCTATGCATTGGTACTGCCCCGATGAGTGGAACTAAAAGCAATTCCAATCATGAGAGTGAAATCTAGCGTGGGAATTGGCACGGTGGGATTGGTCGGAGAGGGAACAGGTGGCGGCTCAGAGTGTTGATTGGAGTGAAGCTGTAAAGATTGATGGTGGGTGGGATGATTAGAAAGAACAAATGTTGTAATGAACAAATAATGATTCCCTTGGGCTTTTTCCCCCCTTTCATTTCTAAACCATTTTTATGCCCTAGATTCCTATAATATTTGTACTTCACTAAATTAAATCCATCTTTGGTGAATATTTTGAAAA

Coding sequence (CDS)

ATGAAGAGACATGGCAGCTCAGATTCGTTGGGCGCTCTGATGTCTGTGTGTCCTACTTCAGATGAACAGAGTCCGAGGAACAGCCATGTTTATGGCAGGGAATTTCAGTCGATGTTGGACGGGTTGGACGAAGAAGGCTCCATGGAAGAACAGTGTCATGTGGGAGAGAAGAAAAGGAGACTCAGTGTTGATCAAGTTAAGGCCTTGGAGAAAACATTCGAGATTGAAAACAAGCTGGAACCAGATAGGAAAGTGAAGCTTGCTCTAGAACTTGGCCTGCAGCCAAGGCAAGTTGCTGTATGGTTCCAAAACCGTAGAGCCCGATGGAAAACTAAGCAACTGGAGAGAGATTATGGGCTTCTGAAAGCCAATTACGAAACTCTCAAGCGTAGTTTCGATACCCTTCAGAAGGACAATGATGGTCTGCTCAAAGAGATTAAAGAATTGAAATTGAAGCTCGAGGAAGAGAAGACAGAGAGGCATTTATCAGTGAAGGAAGAGATTTTCGTGCCAGAATCGGGCAATTTACTTATTGAGCAGACGAACAATCATCTTTCGGTGGATCATGTTCCTCTTCCTGTTTCTTCGGATCATTCCGACGACTTCAACTACGAGAGCTTCAGAATAGCAAGCGCCGAGGATGGGGACGAACAAAGAGTTAAAGTATCGTTGTTCCCTGATTTTAAAGATGGGTCATCGGACAGCGACTCAAGCGCCATATTAAACGAAGACAACAGCCCAAACGCCGTCGTATCGTCCACGGCCGCCGGGATGCTCCAAAGCAAACAGCAAATTCTGTCGTCTCCGACGTCGTCTTTGAACTGGTTCCCGTATCAAAAGGCAGCAGCTTATAATAATGCACAACAATACGTGAAAATCGAAGAGTACAATTTCTTCAGCGGAGAAGAGAGCTGTGATTTGTTCTCCGATGAACAAGCGCCGTCTATGCATTGGTACTGCCCCGATGAGTGGAACTAA

Protein sequence

MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNAQQYVKIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN

Homology

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BLAST of CmaCh03G008210 vs. Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 9.4e-66
Identity = 165/343 (48.10%), Postives = 209/343 (60.93%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTS--DEQSPRNSHVYGREFQSMLDGLDEEGS--MEEQCHVG- 60
           MKR  SSDS+G L+S+CPT+  DEQSPR     GREFQSML+G +EE    +EE+ HVG 
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYG--GREFQSMLEGYEEEEEAIVEERGHVGL 61

Query: 61  -EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQL 120
            EKKRRLS++QVKALEK FE+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQL
Sbjct: 62  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 121

Query: 121 ERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKL-------EEEKTERHLSVKEE 180
           E+DYG+LK  Y++L+ +FD+L++DN+ LL+EI +LK KL       EEE+    ++ + +
Sbjct: 122 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESD 181

Query: 181 IFVPESGNLLIEQTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPD 240
           I V E    L E+     S      P   +HSD  NY SF      D    +   S F  
Sbjct: 182 ISVKEEEVSLPEKITEAPSSP----PQFLEHSDGLNYRSF--TDLRDLLPLKAAASSFAA 241

Query: 241 FKDGSSDSDSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNA 300
               S  SDSSA+LNE++S N  V++                                N 
Sbjct: 242 AAGSSDSSDSSALLNEESSSNVTVAAPV-------------------------TVPGGNF 301

Query: 301 QQYVKIEE----YNFFSGEESCDLFSDEQAPSMHWYCP-DEWN 326
            Q+VK+E+     +F SGEE+C+ FSDEQ PS+HWY   D WN
Sbjct: 302 FQFVKMEQTEDHEDFLSGEEACEFFSDEQPPSLHWYSTVDHWN 311

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BLAST of CmaCh03G008210 vs. Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2)

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-54
Identity = 151/338 (44.67%), Postives = 200/338 (59.17%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQC-----HVG 60
           MKR  SSDS+  L+S   ++DEQSPR    YG  +QSML+G DE+ ++ E+      H+G
Sbjct: 1   MKRLSSSDSMCGLIST--STDEQSPRG---YGSNYQSMLEGYDEDATLIEEYSGNHHHMG 60

Query: 61  --EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQ 120
             EKKRRL VDQVKALEK FE+ENKLEP+RK KLA ELGLQPRQVAVWFQNRRARWKTKQ
Sbjct: 61  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 120

Query: 121 LERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLE-EEKTERHLSVKEEIFVPE 180
           LE+DYG+LK  Y++L+ +FD+L++DND LL+EI ++K K+  EE    + ++ E +   E
Sbjct: 121 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKEEE 180

Query: 181 SGNLLIEQTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGS 240
                + +T+   S+   PL    +HS  FNY            + R  +      + GS
Sbjct: 181 -----VHKTD---SIPSSPLQF-LEHSSGFNYR-------RSFTDLRDLLPNSTVVEAGS 240

Query: 241 SDS-DSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNAQQYV 300
           SDS DSSA+LN++ S              S    L+ P +              +  Q+V
Sbjct: 241 SDSCDSSAVLNDETS--------------SDNGRLTPPVT----------VTGGSFLQFV 293

Query: 301 KIEE----YNFFSGEESCDLFSDEQAPSMHWY-CPDEW 325
           K E+     +F SGEE+C  FSDEQ PS+HWY   D W
Sbjct: 301 KTEQTEDHEDFLSGEEACGFFSDEQPPSLHWYSASDHW 293

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BLAST of CmaCh03G008210 vs. Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.7e-54
Identity = 153/345 (44.35%), Postives = 208/345 (60.29%), Query Frame = 1


Query: 1   MKR-HGSSDSLGALMSVC-PTSDEQ-SPRNS-----HVYGREFQSMLDGLDEEGSMEEQC 60
           MKR  GSSDSL   + +   T+D+Q SPR +     +    ++  M D L+++GS+E+  
Sbjct: 1   MKRSRGSSDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLG 60

Query: 61  HVG-------EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNR 120
            VG       EKKRRL V+QVKALEK FEI+NKLEP+RKVKLA ELGLQPRQVA+WFQNR
Sbjct: 61  GVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNR 120

Query: 121 RARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVK 180
           RARWKTKQLERDYG+LK+N++ LKR+ D+LQ+DND LL +IKELK KL  E  +      
Sbjct: 121 RARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKG----- 180

Query: 181 EEIFVPESGNLLIEQTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLF 240
               + E+G L   + N  +  ++  L +S        +      ++E   E     S+F
Sbjct: 181 ----IEENGALKAVEANQSVMANNEVLELSHRSPSPPPHIPTDAPTSELAFEM---FSIF 240

Query: 241 P---DFKDGSSD-SDSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKA 300
           P   +F+D  +D SDSSA+LNE+ SPN V    AAG + +     +   S++  F     
Sbjct: 241 PRTENFRDDPADSSDSSAVLNEEYSPNTV---EAAGAVAA----TTVEMSTMGCF----- 300

Query: 301 AAYNNAQQYVKIEEY-NFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
                  Q+VK+EE+ + FSGEE+C LF+D +     WYC D+WN
Sbjct: 301 ------SQFVKMEEHEDLFSGEEACKLFADNE----QWYCSDQWN 311

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BLAST of CmaCh03G008210 vs. Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-36
Identity = 83/132 (62.88%), Postives = 103/132 (78.03%), Query Frame = 1


Query: 41  GLDEEGSMEEQCHV----GEKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPR 100
           G++ EG +EE+       GEKKRRLSV+QV+ALE++FE+ENKLEP+RK +LA +LGLQPR
Sbjct: 31  GMEAEGDVEEEMMACGGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPR 90

Query: 101 QVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKL-EE 160
           QVAVWFQNRRARWKTKQLERDY  L+ +Y++L+   D L++D D LL EIKELK KL +E
Sbjct: 91  QVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDE 150

Query: 161 EKTERHLSVKEE 168
           E      SVKEE
Sbjct: 151 EAAASFTSVKEE 162

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BLAST of CmaCh03G008210 vs. Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-36
Identity = 83/132 (62.88%), Postives = 103/132 (78.03%), Query Frame = 1


Query: 41  GLDEEGSMEEQCHV----GEKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPR 100
           G++ EG +EE+       GEKKRRLSV+QV+ALE++FE+ENKLEP+RK +LA +LGLQPR
Sbjct: 31  GMEAEGDVEEEMMACGGGGEKKRRLSVEQVRALERSFEVENKLEPERKARLARDLGLQPR 90

Query: 101 QVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKL-EE 160
           QVAVWFQNRRARWKTKQLERDY  L+ +Y++L+   D L++D D LL EIKELK KL +E
Sbjct: 91  QVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKELKAKLGDE 150

Query: 161 EKTERHLSVKEE 168
           E      SVKEE
Sbjct: 151 EAAASFTSVKEE 162

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BLAST of CmaCh03G008210 vs. TrEMBL
Match: A0A0A0KGQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499720 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.4e-156
Identity = 285/325 (87.69%), Postives = 304/325 (93.54%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRR 60
           MKRHGSSDSLGALMSVCPTS+EQSPRNSHVYGREFQSMLDGLDEEGS+EE CHVGEKKRR
Sbjct: 1   MKRHGSSDSLGALMSVCPTSEEQSPRNSHVYGREFQSMLDGLDEEGSIEEHCHVGEKKRR 60

Query: 61  LSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120
           LSVDQVKALEKTFEIENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYGL
Sbjct: 61  LSVDQVKALEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120

Query: 121 LKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQ 180
           LKANYE+LKRSFDTLQ+DND LLKEIKELK KLEEEKTE +LSVKEEIFV ES NLLIEQ
Sbjct: 121 LKANYESLKRSFDTLQQDNDALLKEIKELKSKLEEEKTESNLSVKEEIFVSESDNLLIEQ 180

Query: 181 TNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSAI 240
           T NHL VDH+ LPV+SDHSDDFNYESFR   A+DGD+QRV+VSLF DFKDGSSDSDSSAI
Sbjct: 181 TTNHLPVDHISLPVASDHSDDFNYESFRTVGADDGDDQRVEVSLFTDFKDGSSDSDSSAI 240

Query: 241 LNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNAQQYVKIEEYNFFS 300
           LNEDNSPNAVVSS  AGMLQS  QILSSP +SLN +P+QK AAYNNAQQ+VKIEE+NFFS
Sbjct: 241 LNEDNSPNAVVSSATAGMLQSHHQILSSPATSLNCYPFQK-AAYNNAQQFVKIEEHNFFS 300

Query: 301 GEESCDLFSDEQAPSMHWYCPDEWN 326
           GEE+C+LFSDEQAPSMHWYCPD+WN
Sbjct: 301 GEETCNLFSDEQAPSMHWYCPDQWN 324

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BLAST of CmaCh03G008210 vs. TrEMBL
Match: A0A061DJ94_THECC (Alanine--glyoxylate aminotransferase 2 isoform 1 OS=Theobroma cacao GN=TCM_001039 PE=4 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.5e-105
Identity = 220/347 (63.40%), Postives = 257/347 (74.06%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRR 60
           MKR GSSDSLGALMS+CPT+DE SPRN+H+Y REFQSMLDGLDEEG +EE  HV EKKRR
Sbjct: 1   MKRLGSSDSLGALMSICPTTDEHSPRNNHIYSREFQSMLDGLDEEGCVEESGHVAEKKRR 60

Query: 61  LSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120
           LSVDQVKALEK FE+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYGL
Sbjct: 61  LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120

Query: 121 LKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQ 180
           LK +YETLK ++DTLQ DN+ LLKEI+ELK KL  E TE +LSVKEE+ V E+ N  +EQ
Sbjct: 121 LKTSYETLKVNYDTLQHDNEALLKEIRELKAKLNGESTESNLSVKEEVIVHETDNKTLEQ 180

Query: 181 TNNHLSVDHVPLPVS----SDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSD 240
           +         P PVS    S    + NYESF  +    G       +LFPD KDGSSDSD
Sbjct: 181 SE--------PPPVSSLVTSSEPAELNYESFNNSIGSVG------ATLFPDLKDGSSDSD 240

Query: 241 SSAILNEDN---SP-NAVVSSTAAGMLQSKQQILSSPT--------------SSLNWFPY 300
           SSAILNEDN   SP NA +SS  +G+LQS+Q +L SPT              SS+N F +
Sbjct: 241 SSAILNEDNNNCSPNNAAISS--SGVLQSQQHLLMSPTTTSSLNFNSSSSSPSSMNCFQF 300

Query: 301 QKAAAYNNAQQYVKIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
            K + Y  + QYVK+EE+NFFS +E+C+ FSDEQAPS+HWY P++WN
Sbjct: 301 SK-STYQPSHQYVKMEEHNFFSADEACNFFSDEQAPSLHWYSPEQWN 330

[Close]

BLAST of CmaCh03G008210 vs. TrEMBL
Match: A0A067KD47_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18664 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 5.2e-103
Identity = 213/334 (63.77%), Postives = 254/334 (76.05%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNS-HVYGREFQSMLDGLDEEGSMEEQCHVGEKKR 60
           MKR  SSDSLGAL+S+CPTSDE SPRNS HVYGREFQSMLDGLDEE  +EE  HV EKKR
Sbjct: 1   MKRLSSSDSLGALISICPTSDEHSPRNSNHVYGREFQSMLDGLDEEACVEEAGHVSEKKR 60

Query: 61  RLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYG 120
           RLSVDQVKALEK FE+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYG
Sbjct: 61  RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 120

Query: 121 LLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIE 180
           +LKANYETLK ++D LQ DN+ LLKEI+ELK KL+E+  E ++SVKEEI + E+     E
Sbjct: 121 VLKANYETLKVNYDALQHDNEALLKEIRELKAKLDEDNAESNVSVKEEIIIAETDEKGSE 180

Query: 181 QTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSA 240
           +         +   ++   + D NYESF I S+ + +   + VSLFPDFKDGSSDSDSSA
Sbjct: 181 EPP-------ILTSIAGSETKDMNYESFNINSS-NSNNGILAVSLFPDFKDGSSDSDSSA 240

Query: 241 ILNEDN-----SPNAVVSSTAAGMLQSKQQILSSPT---SSLNWFPYQKAAAYNNAQQYV 300
           ILNEDN     SPN  +SS+  G+ QS  Q++ SP+   SS + F + K  +Y    Q+V
Sbjct: 241 ILNEDNNNSNNSPNPAISSS--GVPQSHNQLMMSPSRPSSSSSPFQFIKTGSYQT--QFV 300

Query: 301 KIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
           K+EE+NFFS EE+C+ FSDEQAPS+ WYCPD+WN
Sbjct: 301 KMEEHNFFSSEEACNFFSDEQAPSLQWYCPDQWN 322

[Close]

BLAST of CmaCh03G008210 vs. TrEMBL
Match: A0A061DID8_THECC (Alanine--glyoxylate aminotransferase 2 isoform 3 OS=Theobroma cacao GN=TCM_001039 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 4.5e-99
Identity = 208/334 (62.28%), Postives = 245/334 (73.35%), Query Frame = 1


Query: 14  MSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRRLSVDQVKALEKTF 73
           MS+CPT+DE SPRN+H+Y REFQSMLDGLDEEG +EE  HV EKKRRLSVDQVKALEK F
Sbjct: 1   MSICPTTDEHSPRNNHIYSREFQSMLDGLDEEGCVEESGHVAEKKRRLSVDQVKALEKNF 60

Query: 74  EIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFD 133
           E+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYGLLK +YETLK ++D
Sbjct: 61  EVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKTSYETLKVNYD 120

Query: 134 TLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQTNNHLSVDHVPLP 193
           TLQ DN+ LLKEI+ELK KL  E TE +LSVKEE+ V E+ N  +EQ+         P P
Sbjct: 121 TLQHDNEALLKEIRELKAKLNGESTESNLSVKEEVIVHETDNKTLEQSE--------PPP 180

Query: 194 VS----SDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSAILNEDN---S 253
           VS    S    + NYESF  +    G       +LFPD KDGSSDSDSSAILNEDN   S
Sbjct: 181 VSSLVTSSEPAELNYESFNNSIGSVG------ATLFPDLKDGSSDSDSSAILNEDNNNCS 240

Query: 254 P-NAVVSSTAAGMLQSKQQILSSPT--------------SSLNWFPYQKAAAYNNAQQYV 313
           P NA +SS  +G+LQS+Q +L SPT              SS+N F + K + Y  + QYV
Sbjct: 241 PNNAAISS--SGVLQSQQHLLMSPTTTSSLNFNSSSSSPSSMNCFQFSK-STYQPSHQYV 300

Query: 314 KIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
           K+EE+NFFS +E+C+ FSDEQAPS+HWY P++WN
Sbjct: 301 KMEEHNFFSADEACNFFSDEQAPSLHWYSPEQWN 317

[Close]

BLAST of CmaCh03G008210 vs. TrEMBL
Match: M5WIS1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008318mg PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 5.0e-98
Identity = 210/352 (59.66%), Postives = 259/352 (73.58%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRR 60
           MKR GSSDSLGA++S+CP+++EQSPRN+HVY R+FQSMLDGLDEEG +EE  HV EKKRR
Sbjct: 1   MKRLGSSDSLGAMISICPSTEEQSPRNNHVYRRDFQSMLDGLDEEGCVEEGGHVSEKKRR 60

Query: 61  LSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120
           LSV+QVKALEK FE+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERD+G+
Sbjct: 61  LSVEQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDFGV 120

Query: 121 LKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTE-RHLSVKEEIFVPESGNLLIE 180
           LKANY++LK ++D LQ +N+ L+KEIK+LK KL+EE TE  +LSVKEE        ++ +
Sbjct: 121 LKANYDSLKLNYDNLQHENEALVKEIKQLKSKLQEENTESNNLSVKEE-------QMVAK 180

Query: 181 QTNNHLSVDH------VPLPVSSD----HSDDFNYESFRIASAEDGDEQRVKVSLFPDFK 240
             +N+  VDH       P P+ S      S + N+ESF   +  +G      VSLFPDFK
Sbjct: 181 DQSNYKVVDHELSKSPPPPPLGSSVPATESKELNFESFN--NTNNGAVGLEAVSLFPDFK 240

Query: 241 DGSSDSDSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSP----------------TSSL 300
           DGSSDSDSSAILNEDNSPN  +SS  +GMLQ+  Q++ SP                +SS+
Sbjct: 241 DGSSDSDSSAILNEDNSPNLTISS--SGMLQN-HQLMKSPASTSLKFNCCSSSSPSSSSM 300

Query: 301 NWFPYQKAAAYNNAQQYVKIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
           N F +QK   Y+   Q+VKIEE+NFFS EE+C  FSDEQAP++ W CPD+WN
Sbjct: 301 NCFQFQK--TYH--PQFVKIEEHNFFSSEEACSFFSDEQAPTLQWCCPDQWN 336

[Close]

BLAST of CmaCh03G008210 vs. TAIR10
Match: AT2G22430.1 (AT2G22430.1 homeobox protein 6)

HSP 1 Score: 251.9 bits (642), Expect = 5.3e-67
Identity = 165/343 (48.10%), Postives = 209/343 (60.93%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTS--DEQSPRNSHVYGREFQSMLDGLDEEGS--MEEQCHVG- 60
           MKR  SSDS+G L+S+CPT+  DEQSPR     GREFQSML+G +EE    +EE+ HVG 
Sbjct: 2   MKRLSSSDSVGGLISLCPTTSTDEQSPRRYG--GREFQSMLEGYEEEEEAIVEERGHVGL 61

Query: 61  -EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQL 120
            EKKRRLS++QVKALEK FE+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQL
Sbjct: 62  SEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQL 121

Query: 121 ERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKL-------EEEKTERHLSVKEE 180
           E+DYG+LK  Y++L+ +FD+L++DN+ LL+EI +LK KL       EEE+    ++ + +
Sbjct: 122 EKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNAAVTTESD 181

Query: 181 IFVPESGNLLIEQTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPD 240
           I V E    L E+     S      P   +HSD  NY SF      D    +   S F  
Sbjct: 182 ISVKEEEVSLPEKITEAPSSP----PQFLEHSDGLNYRSF--TDLRDLLPLKAAASSFAA 241

Query: 241 FKDGSSDSDSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNA 300
               S  SDSSA+LNE++S N  V++                                N 
Sbjct: 242 AAGSSDSSDSSALLNEESSSNVTVAAPV-------------------------TVPGGNF 301

Query: 301 QQYVKIEE----YNFFSGEESCDLFSDEQAPSMHWYCP-DEWN 326
            Q+VK+E+     +F SGEE+C+ FSDEQ PS+HWY   D WN
Sbjct: 302 FQFVKMEQTEDHEDFLSGEEACEFFSDEQPPSLHWYSTVDHWN 311

[Close]

BLAST of CmaCh03G008210 vs. TAIR10
Match: AT4G40060.1 (AT4G40060.1 homeobox protein 16)

HSP 1 Score: 213.4 bits (542), Expect = 2.1e-55
Identity = 151/338 (44.67%), Postives = 200/338 (59.17%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQC-----HVG 60
           MKR  SSDS+  L+S   ++DEQSPR    YG  +QSML+G DE+ ++ E+      H+G
Sbjct: 1   MKRLSSSDSMCGLIST--STDEQSPRG---YGSNYQSMLEGYDEDATLIEEYSGNHHHMG 60

Query: 61  --EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQ 120
             EKKRRL VDQVKALEK FE+ENKLEP+RK KLA ELGLQPRQVAVWFQNRRARWKTKQ
Sbjct: 61  LSEKKRRLKVDQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQ 120

Query: 121 LERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLE-EEKTERHLSVKEEIFVPE 180
           LE+DYG+LK  Y++L+ +FD+L++DND LL+EI ++K K+  EE    + ++ E +   E
Sbjct: 121 LEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISKIKAKVNGEEDNNNNKAITEGVKEEE 180

Query: 181 SGNLLIEQTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGS 240
                + +T+   S+   PL    +HS  FNY            + R  +      + GS
Sbjct: 181 -----VHKTD---SIPSSPLQF-LEHSSGFNYR-------RSFTDLRDLLPNSTVVEAGS 240

Query: 241 SDS-DSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNAQQYV 300
           SDS DSSA+LN++ S              S    L+ P +              +  Q+V
Sbjct: 241 SDSCDSSAVLNDETS--------------SDNGRLTPPVT----------VTGGSFLQFV 293

Query: 301 KIEE----YNFFSGEESCDLFSDEQAPSMHWY-CPDEW 325
           K E+     +F SGEE+C  FSDEQ PS+HWY   D W
Sbjct: 301 KTEQTEDHEDFLSGEEACGFFSDEQPPSLHWYSASDHW 293

[Close]

BLAST of CmaCh03G008210 vs. TAIR10
Match: AT5G65310.1 (AT5G65310.1 homeobox protein 5)

HSP 1 Score: 213.4 bits (542), Expect = 2.1e-55
Identity = 153/345 (44.35%), Postives = 208/345 (60.29%), Query Frame = 1


Query: 1   MKR-HGSSDSLGALMSVC-PTSDEQ-SPRNS-----HVYGREFQSMLDGLDEEGSMEEQC 60
           MKR  GSSDSL   + +   T+D+Q SPR +     +    ++  M D L+++GS+E+  
Sbjct: 1   MKRSRGSSDSLSGFLPIRHSTTDKQISPRPTTTGFLYSGAGDYSQMFDALEDDGSLEDLG 60

Query: 61  HVG-------EKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNR 120
            VG       EKKRRL V+QVKALEK FEI+NKLEP+RKVKLA ELGLQPRQVA+WFQNR
Sbjct: 61  GVGHASSTAAEKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNR 120

Query: 121 RARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVK 180
           RARWKTKQLERDYG+LK+N++ LKR+ D+LQ+DND LL +IKELK KL  E  +      
Sbjct: 121 RARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKELKAKLNVEGVKG----- 180

Query: 181 EEIFVPESGNLLIEQTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLF 240
               + E+G L   + N  +  ++  L +S        +      ++E   E     S+F
Sbjct: 181 ----IEENGALKAVEANQSVMANNEVLELSHRSPSPPPHIPTDAPTSELAFEM---FSIF 240

Query: 241 P---DFKDGSSD-SDSSAILNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKA 300
           P   +F+D  +D SDSSA+LNE+ SPN V    AAG + +     +   S++  F     
Sbjct: 241 PRTENFRDDPADSSDSSAVLNEEYSPNTV---EAAGAVAA----TTVEMSTMGCF----- 300

Query: 301 AAYNNAQQYVKIEEY-NFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
                  Q+VK+EE+ + FSGEE+C LF+D +     WYC D+WN
Sbjct: 301 ------SQFVKMEEHEDLFSGEEACKLFADNE----QWYCSDQWN 311

[Close]

BLAST of CmaCh03G008210 vs. TAIR10
Match: AT3G01470.1 (AT3G01470.1 homeobox 1)

HSP 1 Score: 129.8 bits (325), Expect = 3.1e-30
Identity = 70/122 (57.38%), Postives = 90/122 (73.77%), Query Frame = 1


Query: 33  REFQSMLDGLDEEGSMEEQCHVGEKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELG 92
           R F S  + L ++   ++Q  + EKKRRL+ +QV  LEK+FE ENKLEP+RK +LA +LG
Sbjct: 46  RPFFSSPEDLYDDDFYDDQ--LPEKKRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLG 105

Query: 93  LQPRQVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLK 152
           LQPRQVAVWFQNRRARWKTKQLERDY LLK+ Y+ L  ++D++  DND L  E+  L  K
Sbjct: 106 LQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEK 165

Query: 153 LE 155
           L+
Sbjct: 166 LQ 165

[Close]

BLAST of CmaCh03G008210 vs. TAIR10
Match: AT1G69780.1 (AT1G69780.1 Homeobox-leucine zipper protein family)

HSP 1 Score: 125.9 bits (315), Expect = 4.4e-29
Identity = 75/154 (48.70%), Postives = 100/154 (64.94%), Query Frame = 1


Query: 44  EEGSMEEQCHVGEKKRRLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQ 103
           EE   ++   +GEKKRRL+++QVK LEK FE+ NKLEP+RK++LA  LGLQPRQ+A+WFQ
Sbjct: 72  EEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQ 131

Query: 104 NRRARWKTKQLERDYGLLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLS 163
           NRRARWKTKQLE+DY  LK  ++TLK   D LQ  N  L  EI  LK     E+TE   S
Sbjct: 132 NRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLK---NREQTE---S 191

Query: 164 VKEEIFVPESGNLLIEQTNNHLSVDHVPLPVSSD 198
           +        S +   + ++++L +D    P S+D
Sbjct: 192 INLNKETEGSCSNRSDNSSDNLRLDISTAPPSND 219

[Close]

BLAST of CmaCh03G008210 vs. NCBI nr
Match: gi|659080027|ref|XP_008440572.1| (PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo])

HSP 1 Score: 560.5 bits (1443), Expect = 2.0e-156
Identity = 285/325 (87.69%), Postives = 304/325 (93.54%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRR 60
           MKRHGSSDSLGALMSVCPTS+EQSPRNSHVYGREFQSMLDGLDEEGS+EE CHVGEKKRR
Sbjct: 1   MKRHGSSDSLGALMSVCPTSEEQSPRNSHVYGREFQSMLDGLDEEGSIEEHCHVGEKKRR 60

Query: 61  LSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120
           LSVDQVKALEKTFEIENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYGL
Sbjct: 61  LSVDQVKALEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120

Query: 121 LKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQ 180
           LKANYE+LKRSFDTLQ+DND LLKEIKELK KLEEEKTE +LSVKEEIFV ES NLLIEQ
Sbjct: 121 LKANYESLKRSFDTLQQDNDALLKEIKELKSKLEEEKTESNLSVKEEIFVSESDNLLIEQ 180

Query: 181 TNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSAI 240
           T NHL VDH+ LPV+SDHSDDF+YESFR   A+DGD+QRV+VSLFPDFKDGSSDSDSSAI
Sbjct: 181 TTNHLPVDHISLPVASDHSDDFDYESFRTVGADDGDDQRVEVSLFPDFKDGSSDSDSSAI 240

Query: 241 LNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNAQQYVKIEEYNFFS 300
           LNEDNSPNAVVSS  AGMLQS  QILSSP +SLN FP+QK A YNNAQQ+VKIEE+NFFS
Sbjct: 241 LNEDNSPNAVVSSATAGMLQSHHQILSSPATSLNCFPFQK-ATYNNAQQFVKIEEHNFFS 300

Query: 301 GEESCDLFSDEQAPSMHWYCPDEWN 326
           GEE+C+LFSDEQAPSMHWYCPD+WN
Sbjct: 301 GEETCNLFSDEQAPSMHWYCPDQWN 324

[Close]

BLAST of CmaCh03G008210 vs. NCBI nr
Match: gi|449451407|ref|XP_004143453.1| (PREDICTED: homeobox-leucine zipper protein ATHB-6 [Cucumis sativus])

HSP 1 Score: 559.7 bits (1441), Expect = 3.4e-156
Identity = 285/325 (87.69%), Postives = 304/325 (93.54%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRR 60
           MKRHGSSDSLGALMSVCPTS+EQSPRNSHVYGREFQSMLDGLDEEGS+EE CHVGEKKRR
Sbjct: 1   MKRHGSSDSLGALMSVCPTSEEQSPRNSHVYGREFQSMLDGLDEEGSIEEHCHVGEKKRR 60

Query: 61  LSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120
           LSVDQVKALEKTFEIENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYGL
Sbjct: 61  LSVDQVKALEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120

Query: 121 LKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQ 180
           LKANYE+LKRSFDTLQ+DND LLKEIKELK KLEEEKTE +LSVKEEIFV ES NLLIEQ
Sbjct: 121 LKANYESLKRSFDTLQQDNDALLKEIKELKSKLEEEKTESNLSVKEEIFVSESDNLLIEQ 180

Query: 181 TNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSAI 240
           T NHL VDH+ LPV+SDHSDDFNYESFR   A+DGD+QRV+VSLF DFKDGSSDSDSSAI
Sbjct: 181 TTNHLPVDHISLPVASDHSDDFNYESFRTVGADDGDDQRVEVSLFTDFKDGSSDSDSSAI 240

Query: 241 LNEDNSPNAVVSSTAAGMLQSKQQILSSPTSSLNWFPYQKAAAYNNAQQYVKIEEYNFFS 300
           LNEDNSPNAVVSS  AGMLQS  QILSSP +SLN +P+QK AAYNNAQQ+VKIEE+NFFS
Sbjct: 241 LNEDNSPNAVVSSATAGMLQSHHQILSSPATSLNCYPFQK-AAYNNAQQFVKIEEHNFFS 300

Query: 301 GEESCDLFSDEQAPSMHWYCPDEWN 326
           GEE+C+LFSDEQAPSMHWYCPD+WN
Sbjct: 301 GEETCNLFSDEQAPSMHWYCPDQWN 324

[Close]

BLAST of CmaCh03G008210 vs. NCBI nr
Match: gi|590706919|ref|XP_007047858.1| (Alanine--glyoxylate aminotransferase 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 390.2 bits (1001), Expect = 3.6e-105
Identity = 220/347 (63.40%), Postives = 257/347 (74.06%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRR 60
           MKR GSSDSLGALMS+CPT+DE SPRN+H+Y REFQSMLDGLDEEG +EE  HV EKKRR
Sbjct: 1   MKRLGSSDSLGALMSICPTTDEHSPRNNHIYSREFQSMLDGLDEEGCVEESGHVAEKKRR 60

Query: 61  LSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120
           LSVDQVKALEK FE+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYGL
Sbjct: 61  LSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGL 120

Query: 121 LKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQ 180
           LK +YETLK ++DTLQ DN+ LLKEI+ELK KL  E TE +LSVKEE+ V E+ N  +EQ
Sbjct: 121 LKTSYETLKVNYDTLQHDNEALLKEIRELKAKLNGESTESNLSVKEEVIVHETDNKTLEQ 180

Query: 181 TNNHLSVDHVPLPVS----SDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSD 240
           +         P PVS    S    + NYESF  +    G       +LFPD KDGSSDSD
Sbjct: 181 SE--------PPPVSSLVTSSEPAELNYESFNNSIGSVG------ATLFPDLKDGSSDSD 240

Query: 241 SSAILNEDN---SP-NAVVSSTAAGMLQSKQQILSSPT--------------SSLNWFPY 300
           SSAILNEDN   SP NA +SS  +G+LQS+Q +L SPT              SS+N F +
Sbjct: 241 SSAILNEDNNNCSPNNAAISS--SGVLQSQQHLLMSPTTTSSLNFNSSSSSPSSMNCFQF 300

Query: 301 QKAAAYNNAQQYVKIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
            K + Y  + QYVK+EE+NFFS +E+C+ FSDEQAPS+HWY P++WN
Sbjct: 301 SK-STYQPSHQYVKMEEHNFFSADEACNFFSDEQAPSLHWYSPEQWN 330

[Close]

BLAST of CmaCh03G008210 vs. NCBI nr
Match: gi|802673601|ref|XP_012081624.1| (PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas])

HSP 1 Score: 382.5 bits (981), Expect = 7.4e-103
Identity = 213/334 (63.77%), Postives = 254/334 (76.05%), Query Frame = 1


Query: 1   MKRHGSSDSLGALMSVCPTSDEQSPRNS-HVYGREFQSMLDGLDEEGSMEEQCHVGEKKR 60
           MKR  SSDSLGAL+S+CPTSDE SPRNS HVYGREFQSMLDGLDEE  +EE  HV EKKR
Sbjct: 1   MKRLSSSDSLGALISICPTSDEHSPRNSNHVYGREFQSMLDGLDEEACVEEAGHVSEKKR 60

Query: 61  RLSVDQVKALEKTFEIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYG 120
           RLSVDQVKALEK FE+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYG
Sbjct: 61  RLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYG 120

Query: 121 LLKANYETLKRSFDTLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIE 180
           +LKANYETLK ++D LQ DN+ LLKEI+ELK KL+E+  E ++SVKEEI + E+     E
Sbjct: 121 VLKANYETLKVNYDALQHDNEALLKEIRELKAKLDEDNAESNVSVKEEIIIAETDEKGSE 180

Query: 181 QTNNHLSVDHVPLPVSSDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSA 240
           +         +   ++   + D NYESF I S+ + +   + VSLFPDFKDGSSDSDSSA
Sbjct: 181 EPP-------ILTSIAGSETKDMNYESFNINSS-NSNNGILAVSLFPDFKDGSSDSDSSA 240

Query: 241 ILNEDN-----SPNAVVSSTAAGMLQSKQQILSSPT---SSLNWFPYQKAAAYNNAQQYV 300
           ILNEDN     SPN  +SS+  G+ QS  Q++ SP+   SS + F + K  +Y    Q+V
Sbjct: 241 ILNEDNNNSNNSPNPAISSS--GVPQSHNQLMMSPSRPSSSSSPFQFIKTGSYQT--QFV 300

Query: 301 KIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
           K+EE+NFFS EE+C+ FSDEQAPS+ WYCPD+WN
Sbjct: 301 KMEEHNFFSSEEACNFFSDEQAPSLQWYCPDQWN 322

[Close]

BLAST of CmaCh03G008210 vs. NCBI nr
Match: gi|590706927|ref|XP_007047860.1| (Alanine--glyoxylate aminotransferase 2 isoform 3 [Theobroma cacao])

HSP 1 Score: 369.4 bits (947), Expect = 6.5e-99
Identity = 208/334 (62.28%), Postives = 245/334 (73.35%), Query Frame = 1


Query: 14  MSVCPTSDEQSPRNSHVYGREFQSMLDGLDEEGSMEEQCHVGEKKRRLSVDQVKALEKTF 73
           MS+CPT+DE SPRN+H+Y REFQSMLDGLDEEG +EE  HV EKKRRLSVDQVKALEK F
Sbjct: 1   MSICPTTDEHSPRNNHIYSREFQSMLDGLDEEGCVEESGHVAEKKRRLSVDQVKALEKNF 60

Query: 74  EIENKLEPDRKVKLALELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKANYETLKRSFD 133
           E+ENKLEP+RKVKLA ELGLQPRQVAVWFQNRRARWKTKQLERDYGLLK +YETLK ++D
Sbjct: 61  EVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGLLKTSYETLKVNYD 120

Query: 134 TLQKDNDGLLKEIKELKLKLEEEKTERHLSVKEEIFVPESGNLLIEQTNNHLSVDHVPLP 193
           TLQ DN+ LLKEI+ELK KL  E TE +LSVKEE+ V E+ N  +EQ+         P P
Sbjct: 121 TLQHDNEALLKEIRELKAKLNGESTESNLSVKEEVIVHETDNKTLEQSE--------PPP 180

Query: 194 VS----SDHSDDFNYESFRIASAEDGDEQRVKVSLFPDFKDGSSDSDSSAILNEDN---S 253
           VS    S    + NYESF  +    G       +LFPD KDGSSDSDSSAILNEDN   S
Sbjct: 181 VSSLVTSSEPAELNYESFNNSIGSVG------ATLFPDLKDGSSDSDSSAILNEDNNNCS 240

Query: 254 P-NAVVSSTAAGMLQSKQQILSSPT--------------SSLNWFPYQKAAAYNNAQQYV 313
           P NA +SS  +G+LQS+Q +L SPT              SS+N F + K + Y  + QYV
Sbjct: 241 PNNAAISS--SGVLQSQQHLLMSPTTTSSLNFNSSSSSPSSMNCFQFSK-STYQPSHQYV 300

Query: 314 KIEEYNFFSGEESCDLFSDEQAPSMHWYCPDEWN 326
           K+EE+NFFS +E+C+ FSDEQAPS+HWY P++WN
Sbjct: 301 KMEEHNFFSADEACNFFSDEQAPSLHWYSPEQWN 317

The following BLAST results are available for this feature:

BLAST of CmaCh03G008210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATHB6_ARATH	9.4e-66	48.10	Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV...	[more]
ATB16_ARATH	3.7e-54	44.67	Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 ...	[more]
ATHB5_ARATH	3.7e-54	44.35	Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV...	[more]
HOX4_ORYSI	1.6e-36	62.88	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 ...	[more]
HOX4_ORYSJ	1.6e-36	62.88	Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=...	[more]

BLAST of CmaCh03G008210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGQ3_CUCSA	2.4e-156	87.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G499720 PE=4 SV=1	[more]
A0A061DJ94_THECC	2.5e-105	63.40	Alanine--glyoxylate aminotransferase 2 isoform 1 OS=Theobroma cacao GN=TCM_00103...	[more]
A0A067KD47_JATCU	5.2e-103	63.77	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18664 PE=4 SV=1	[more]
A0A061DID8_THECC	4.5e-99	62.28	Alanine--glyoxylate aminotransferase 2 isoform 3 OS=Theobroma cacao GN=TCM_00103...	[more]
M5WIS1_PRUPE	5.0e-98	59.66	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008318mg PE=4 SV=1	[more]

BLAST of CmaCh03G008210 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22430.1	5.3e-67	48.10	homeobox protein 6	[more]
AT4G40060.1	2.1e-55	44.67	homeobox protein 16	[more]
AT5G65310.1	2.1e-55	44.35	homeobox protein 5	[more]
AT3G01470.1	3.1e-30	57.38	homeobox 1	[more]
AT1G69780.1	4.4e-29	48.70	Homeobox-leucine zipper protein family	[more]

BLAST of CmaCh03G008210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080027\|ref\|XP_008440572.1\|	2.0e-156	87.69	PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Cucumis melo]	[more]
gi\|449451407\|ref\|XP_004143453.1\|	3.4e-156	87.69	PREDICTED: homeobox-leucine zipper protein ATHB-6 [Cucumis sativus]	[more]
gi\|590706919\|ref\|XP_007047858.1\|	3.6e-105	63.40	Alanine--glyoxylate aminotransferase 2 isoform 1 [Theobroma cacao]	[more]
gi\|802673601\|ref\|XP_012081624.1\|	7.4e-103	63.77	PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]	[more]
gi\|590706927\|ref\|XP_007047860.1\|	6.5e-99	62.28	Alanine--glyoxylate aminotransferase 2 isoform 3 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000047	HTH_motif
IPR001356	Homeobox_dom
IPR003106	Leu_zip_homeo
IPR009057	Homeobox-like_sf
IPR017970	Homeobox_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G008210.1	CmaCh03G008210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 92..108 score: 2.8E-5coord: 83..92 score: 2.
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 57..110 score: 1.3
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 55..116 score: 2.8
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 56..112 score: 16
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 112..153 score: 8.3
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 59..119 score: 1.1
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 40..114 score: 3.21
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 87..110 scor
None	No IPR available	unknown	Coil	Coil	coord: 111..166 scor
None	No IPR available	PANTHER	PTHR24326	FAMILY NOT NAMED	coord: 14..160 score: 3.5
None	No IPR available	PANTHER	PTHR24326:SF196	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-16-RELATED	coord: 14..160 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh03G008210	Cucsa.104200	Cucumber (Gy14) v1	cgycmaB0231
CmaCh03G008210	Cucsa.311660	Cucumber (Gy14) v1	cgycmaB0872
CmaCh03G008210	Cla014127	Watermelon (97103) v1	cmawmB632
CmaCh03G008210	Csa6G499720	Cucumber (Chinese Long) v2	cmacuB681
CmaCh03G008210	MELO3C007736	Melon (DHL92) v3.5.1	cmameB617
CmaCh03G008210	ClCG01G018580	Watermelon (Charleston Gray)	cmawcgB579
CmaCh03G008210	CSPI06G30020	Wild cucumber (PI 183967)	cmacpiB689
CmaCh03G008210	CmoCh03G008670	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G008210	CmoCh07G005630	Cucurbita moschata (Rifu)	cmacmoB667
CmaCh03G008210	Lsi04G022520	Bottle gourd (USVL1VR-Ls)	cmalsiB614
CmaCh03G008210	Lsi01G007920	Bottle gourd (USVL1VR-Ls)	cmalsiB597
CmaCh03G008210	Cp4.1LG19g09900	Cucurbita pepo (Zucchini)	cmacpeB671
CmaCh03G008210	Cp4.1LG10g01470	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G008210	MELO3C003554.2	Melon (DHL92) v3.6.1	cmamedB688
CmaCh03G008210	MELO3C007736.2	Melon (DHL92) v3.6.1	cmamedB703
CmaCh03G008210	CsaV3_3G047690	Cucumber (Chinese Long) v3	cmacucB0787
CmaCh03G008210	CsaV3_6G045240	Cucumber (Chinese Long) v3	cmacucB0809
CmaCh03G008210	Cla97C01G017950	Watermelon (97103) v2	cmawmbB670
CmaCh03G008210	Bhi09G002086	Wax gourd	cmawgoB0812
CmaCh03G008210	Bhi03G000878	Wax gourd	cmawgoB0798
CmaCh03G008210	CsGy6G029500	Cucumber (Gy14) v2	cgybcmaB831
CmaCh03G008210	Carg00712	Silver-seed gourd	carcmaB0567
CmaCh03G008210	Carg15978	Silver-seed gourd	carcmaB1055

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh03G008210	CmaCh07G005590	Cucurbita maxima (Rimu)	cmacmaB523

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G008210	Melon (DHL92) v3.6.1	cmamedB681
CmaCh03G008210	Silver-seed gourd	carcmaB0082
CmaCh03G008210	Silver-seed gourd	carcmaB1287
CmaCh03G008210	Cucumber (Chinese Long) v3	cmacucB0779
CmaCh03G008210	Watermelon (97103) v2	cmawmbB699
CmaCh03G008210	Wax gourd	cmawgoB0780
CmaCh03G008210	Cucurbita maxima (Rimu)	cmacmaB518
CmaCh03G008210	Cucumber (Gy14) v1	cgycmaB0458
CmaCh03G008210	Cucurbita moschata (Rifu)	cmacmoB661
CmaCh03G008210	Wild cucumber (PI 183967)	cmacpiB660
CmaCh03G008210	Cucumber (Chinese Long) v2	cmacuB652
CmaCh03G008210	Melon (DHL92) v3.5.1	cmameB597
CmaCh03G008210	Watermelon (Charleston Gray)	cmawcgB601
CmaCh03G008210	Watermelon (97103) v1	cmawmB617
CmaCh03G008210	Cucurbita pepo (Zucchini)	cmacpeB657
CmaCh03G008210	Cucurbita pepo (Zucchini)	cmacpeB686
CmaCh03G008210	Bottle gourd (USVL1VR-Ls)	cmalsiB620
CmaCh03G008210	Cucumber (Gy14) v2	cgybcmaB237