CmaCh03G001850 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G001850
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionATP synthase epsilon chain, chloroplastic
LocationCma_Chr03 : 2626735 .. 2629377 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTCTCAAACGTCGACGACGAGACAGGTAGCCCCCTTGGACTCTATGTTAAGAAATACTTGTAAAAATCGCTTCAATTTTCATATGAGCCCTAAACCAAGTATGAATTGAGGATATATGAAAGAAAAATCCAAAGAACTATGAGTTAAGACCCTGAACAAATCAAATAGCTCGAGATTTAAGTAATGTTAAAATAACCCACTATCTGAGCTCCGCTGTCTATCAAATTTTAATACTGAGCATTTATAGTATGTTGAGGTTAGATATGAAATTTGGTGGTCATTGGATAAGGATAAGTAGGTAAACCAAGAAACAGTGTAAAATGACCTTAATGCCCCTATATTATTTCAATATTCACTCGAGAAACAAGGGGTAAAAACTATATTATTTCAAACCCTCCATTGTTGCTTCTACTTTGCATGAAAATGCTTCTATTAAATCATGTTACTAACTAGTTGGTTTGGTTCGGTTCAATTCTTGGGTCCACTAGATTGAATCGACCTAGCTCAATTAAACTCTTGATAATATAAAAATCATAAGTTTCTTAAATTACGTTAACTTAAAAGTTTAGCCCCTAAATTTTTTAGAATGTTTAGTTTTGTGTCTAGTTGATCTCTAGATGCTTAAAAGTATCTAATAAAACTTCTATTTAAGGAACTTTTCTATATAAGTTATGTAAGACTTAGGTTTATTATTAAGGAATTTTAAAGGAGTGATTTGATATATTATAGATGACAAAATATTTATTTGTTTCAAATATCTTATGTTGACCATTCTTTTTTGGCAAATATTTTGAATATTATCATTGTGAATTACTAATGTCAATTGAATCTCATTAATAACAATATCTCAAAACTCGAGTAAAGATGACATCAAAATTAATACTTTAATTTCATCTTTAAAATTTATTTCTACTTAACTCAGTTGACTTATAATCATAATAGCCACCCATACACAAATATTTACAACCTTAAAAGGTAAAATTAGAACGACTCAACTCTTAAAAAATTTTCCTATTTCTTTTCTAGAAATAACTTCACTCCATTTCTTGGTGTCAAAATAGGTTAAGATAGAGAATCTAATTCTCTTGAAAAAAAAAATGATCTTGGATTAGCAATCCGACGTTTTAGTCCACTCAGCCATCTCTCCCCCAAATTGAAAAAGGATAATTACTATGATACATAGTATAAAAAATAGAAAAATGAAGGCTTGAAAAACGCCCGTCTTTATCTCTCTTTATTATCTTTATCTACCCTTTAATTATATGGATATATAATTATATGGATATATATAATTATCTAGATATATCGATGGATATAGATAAAATCGATAAATACTTTTATGAGCAATTCCATCTAGATAAATTAGATAAAGTAAGGGCTCAAAAGAGATATCTCCATTCCTAATATATAAATAATACCAATATATTAATGATTGCTAAAAGCATATATTTCTAAATAAAACAATATATATATAGTACCTCTTTTATTTTATTTCATCCCAAAAGTCCTTGTCATTTTATTTCCACGGCCTGACCTCACTTGTCCAGGGTTGAGCCCTGGGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCAGATAACGCTTGCATCCTCTGTATTACTGTGATTGCTGGCACAAAGTTAGTCGATGCTTATTCCCCAGATACCGTCATTGCTTCTTCTCCTGGAAAAGAAGTTCACGACCTGTAGGCCTTCTACCTCCATGCGGCATTGCTTCGTCAGGCTTTCGCCCATTGAGGAAAATTCTCCACTACTGCCTCCCGTAGGAGTCTGGGTCGTCTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCTTTTGCTCCTCAGCGAACGGGATATTAGCAGTCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTTCTTATGCGTTACTCACCTGTCCGTCACTGGAAACACCACTTCCCATCCGACTTGCATGTGTATAGCACATGGTTTCATAAAACCGTACGATTTTCCCGATCTAAATAAAGCAGGTTTTACATGAAGAAGATTTGGCTCAGCATGTTCTATTCGATACGGGTAGGAAAAGAACCCAACTCGATATTATTAAATAAATAGAGAAATCAGAACCCAGTCAAGATGATACAGATCAACCCCTTCTTCTTGTGCCAAAGATCTTACCATTTCTGAAGAAACTGAAAGAAATGATTTTAGTTACGAATAGTGGACAAGTTGGTGTATTACCAAATCACGACCTATTGCCACAGGTGTAGATATAGGTATTTTGAGAATACGCCTTACGGATAATGAGGGATGGTTAACGATGGCTCTGATGGATGGTTTTGCTAGAATAGGCAATAATGAGGTCCCTATTTTAGTAAATGATGCGGAGAAGGATAGTGACATTGATCCACAAGAAGCTCAGCAAACTTTTGAAATAGCGGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCGTACCTAGTTGA

mRNA sequence

ATGGAGGTCTCAAACGTCGACGACGAGACAGGTGTAGATATAGGTATTTTGAGAATACGCCTTACGGATAATGAGGGATGGTTAACGATGGCTCTGATGGATGGTTTTGCTAGAATAGGCAATAATGAGGTCCCTATTTTAGTAAATGATGCGGAGAAGGATAGTGACATTGATCCACAAGAAGCTCAGCAAACTTTTGAAATAGCGGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCGTACCTAGTTGA

Coding sequence (CDS)

ATGGAGGTCTCAAACGTCGACGACGAGACAGGTGTAGATATAGGTATTTTGAGAATACGCCTTACGGATAATGAGGGATGGTTAACGATGGCTCTGATGGATGGTTTTGCTAGAATAGGCAATAATGAGGTCCCTATTTTAGTAAATGATGCGGAGAAGGATAGTGACATTGATCCACAAGAAGCTCAGCAAACTTTTGAAATAGCGGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCGTACCTAGTTGA

Protein sequence

MEVSNVDDETGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Homology
[Close]
BLAST of CmaCh03G001850 vs. Swiss-Prot
Match: ATPE_CUCSA (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus GN=atpE PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 4.9e-40
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           T VDIGIL+IRLT N+GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. Swiss-Prot
Match: ATPE_GOSBA (ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense GN=atpE PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.3e-34
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           T VDIGILRIRL D   WLTMALM GFARIGNNE+ ILVNDAEK SDIDPQEAQQ  EIA
Sbjct: 42  TAVDIGILRIRLNDQ--WLTMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQALEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGV 103
           EANLRKA+GKRQTIEANLALRRARTRVEAIN +
Sbjct: 102 EANLRKAEGKRQTIEANLALRRARTRVEAINAI 132

[Close]
BLAST of CmaCh03G001850 vs. Swiss-Prot
Match: ATPE_EUCGG (ATP synthase epsilon chain, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpE PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.3e-34
Identity = 78/93 (83.87%), Postives = 83/93 (89.25%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           T VDIGILRIRL D   WLTMALM GFARIGNNE+ ILVNDAEK SDIDPQEAQ+T E+A
Sbjct: 42  TAVDIGILRIRLNDQ--WLTMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQETLELA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGV 103
           EANLRKA+GKRQTIEANLALRRARTRVEAIN +
Sbjct: 102 EANLRKAEGKRQTIEANLALRRARTRVEAINAI 132

[Close]
BLAST of CmaCh03G001850 vs. Swiss-Prot
Match: ATPE_GOSHI (ATP synthase epsilon chain, chloroplastic OS=Gossypium hirsutum GN=atpE PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.3e-34
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           T VDIGILRIRL D   WLTMALM GFARIGNNE+ ILVNDAEK SDIDPQEAQQ  EIA
Sbjct: 42  TAVDIGILRIRLNDQ--WLTMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQALEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGV 103
           EANLRKA+GKRQTIEANLALRRARTRVEAIN +
Sbjct: 102 EANLRKAEGKRQTIEANLALRRARTRVEAINAI 132

[Close]
BLAST of CmaCh03G001850 vs. Swiss-Prot
Match: ATPE_HELAN (ATP synthase epsilon chain, chloroplastic OS=Helianthus annuus GN=atpE PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.2e-34
Identity = 78/93 (83.87%), Postives = 82/93 (88.17%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           T VDIGILRIRL D   WLTMALM GFARIGNNE+ +LVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TAVDIGILRIRLNDQ--WLTMALMGGFARIGNNEITVLVNDAEKSSDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGV 103
           EA LRKA+GKRQTIEANLALRRARTRVEAIN +
Sbjct: 102 EAALRKAEGKRQTIEANLALRRARTRVEAINAI 132

[Close]
BLAST of CmaCh03G001850 vs. TrEMBL
Match: A0A0S2IEZ8_9ROSI (AtpE OS=Cucurbita ecuadorensis GN=atpE PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 7.5e-40
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGILRIRLTDN+GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILRIRLTDNDGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. TrEMBL
Match: A0A0S2IFH2_9ROSI (AtpE OS=Cucurbita andreana GN=atpE PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 7.5e-40
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGILRIRLTDN+GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILRIRLTDNDGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. TrEMBL
Match: A0A0S2IH62_9ROSI (AtpE OS=Cucurbita pedatifolia GN=atpE PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.4e-39
Identity = 89/95 (93.68%), Postives = 90/95 (94.74%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGILRIRLT N+GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILRIRLTANDGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. TrEMBL
Match: A0A0S2IF83_9ROSI (AtpE OS=Cucurbita lundelliana GN=atpE PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.2e-38
Identity = 88/95 (92.63%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGIL+I LTDN GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILKICLTDNAGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. TrEMBL
Match: A0A0S2IG13_CUCPE (AtpE OS=Cucurbita pepo subsp. fraterna GN=atpE PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 3.2e-38
Identity = 88/95 (92.63%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGIL+I LTDN GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILKICLTDNAGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. TAIR10
Match: ATCG00470.1 (ATCG00470.1 ATP synthase epsilon chain)

HSP 1 Score: 144.1 bits (362), Expect = 5.0e-35
Identity = 77/93 (82.80%), Postives = 84/93 (90.32%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           T VDIGIL+IRL +   WLTMALM GFARIGNNE+ ILVNDAEK+SDIDPQEAQQT EIA
Sbjct: 42  TAVDIGILKIRLANQ--WLTMALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGV 103
           EANLRKA+GKRQTIEANLALRRARTRVEA+N +
Sbjct: 102 EANLRKAEGKRQTIEANLALRRARTRVEALNTI 132

[Close]
BLAST of CmaCh03G001850 vs. NCBI nr
Match: gi|952954676|gb|ALO22035.1| (AtpE (plastid) [Cucurbita ecuadorensis])

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-39
Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGILRIRLTDN+GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILRIRLTDNDGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. NCBI nr
Match: gi|952955568|gb|ALO22914.1| (AtpE (plastid) [Cucurbita pedatifolia])

HSP 1 Score: 167.9 bits (424), Expect = 9.2e-39
Identity = 89/95 (93.68%), Postives = 90/95 (94.74%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGILRIRLT N+GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILRIRLTANDGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. NCBI nr
Match: gi|952954489|gb|ALO21851.1| (AtpE (plastid) [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 165.6 bits (418), Expect = 4.6e-38
Identity = 88/95 (92.63%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGIL+I LTDN GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TGVDIGILKICLTDNAGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. NCBI nr
Match: gi|952954579|gb|ALO21940.1| (AtpE (plastid) [Cucurbita cordata])

HSP 1 Score: 165.2 bits (417), Expect = 5.9e-38
Identity = 88/95 (92.63%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           TGVDIGILRIRLT N+GWLTMALM GFARIGNNEV ILVNDAEK S IDPQEAQQT EIA
Sbjct: 42  TGVDIGILRIRLTANDGWLTMALMGGFARIGNNEVTILVNDAEKASGIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

[Close]
BLAST of CmaCh03G001850 vs. NCBI nr
Match: gi|68164809|ref|YP_247605.1| (ATP synthase CF1 epsilon subunit [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 7.8e-38
Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 1 

Query: 10  TGVDIGILRIRLTDNEGWLTMALMDGFARIGNNEVPILVNDAEKDSDIDPQEAQQTFEIA 69
           T VDIGIL+IRLT N+GWLTMALM GFARIGNNEV ILVNDAEK SDIDPQEAQQT EIA
Sbjct: 42  TAVDIGILKIRLTPNDGWLTMALMGGFARIGNNEVTILVNDAEKASDIDPQEAQQTLEIA 101

Query: 70  EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 105
           EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS
Sbjct: 102 EANLRKAQGKRQTIEANLALRRARTRVEAINGVPS 136

The following BLAST results are available for this feature:
BLAST of CmaCh03G001850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPE_CUCSA4.9e-4091.58ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus GN=atpE PE=3 SV=1[more]
ATPE_GOSBA2.3e-3484.95ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense GN=atpE PE=3 S... [more]
ATPE_EUCGG2.3e-3483.87ATP synthase epsilon chain, chloroplastic OS=Eucalyptus globulus subsp. globulus... [more]
ATPE_GOSHI2.3e-3484.95ATP synthase epsilon chain, chloroplastic OS=Gossypium hirsutum GN=atpE PE=3 SV=... [more]
ATPE_HELAN5.2e-3483.87ATP synthase epsilon chain, chloroplastic OS=Helianthus annuus GN=atpE PE=3 SV=1[more]
BLAST of CmaCh03G001850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S2IEZ8_9ROSI7.5e-4094.74AtpE OS=Cucurbita ecuadorensis GN=atpE PE=3 SV=1[more]
A0A0S2IFH2_9ROSI7.5e-4094.74AtpE OS=Cucurbita andreana GN=atpE PE=3 SV=1[more]
A0A0S2IH62_9ROSI6.4e-3993.68AtpE OS=Cucurbita pedatifolia GN=atpE PE=3 SV=1[more]
A0A0S2IF83_9ROSI3.2e-3892.63AtpE OS=Cucurbita lundelliana GN=atpE PE=3 SV=1[more]
A0A0S2IG13_CUCPE3.2e-3892.63AtpE OS=Cucurbita pepo subsp. fraterna GN=atpE PE=3 SV=1[more]
BLAST of CmaCh03G001850 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00470.15.0e-3582.80ATCG00470.1 ATP synthase epsilon chain[more]
BLAST of CmaCh03G001850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|952954676|gb|ALO22035.1|1.1e-3994.74AtpE (plastid) [Cucurbita ecuadorensis][more]
gi|952955568|gb|ALO22914.1|9.2e-3993.68AtpE (plastid) [Cucurbita pedatifolia][more]
gi|952954489|gb|ALO21851.1|4.6e-3892.63AtpE (plastid) [Cucurbita argyrosperma subsp. sororia][more]
gi|952954579|gb|ALO21940.1|5.9e-3892.63AtpE (plastid) [Cucurbita cordata][more]
gi|68164809|ref|YP_247605.1|7.8e-3891.58ATP synthase CF1 epsilon subunit [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001469ATP_synth_F1_dsu/esu
IPR020546ATP_synth_F1_dsu/esu_N
IPR020547ATP_synth_F1_dsu/esu_C
Vocabulary: Cellular Component
TermDefinition
GO:0045261proton-transporting ATP synthase complex, catalytic core F(1)
Vocabulary: Molecular Function
TermDefinition
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0046961proton-transporting ATPase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
biological_process GO:0006119 oxidative phosphorylation
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function GO:0005524 ATP binding
molecular_function GO:0046961 proton-transporting ATPase activity, rotational mechanism
molecular_function GO:0046933 proton-transporting ATP synthase activity, rotational mechanism
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G001850.1CmaCh03G001850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001469ATPase, F1 complex, delta/epsilon subunitPANTHERPTHR13822ATP SYNTHASE DELTA/EPSILON CHAINcoord: 10..100
score: 5.0
IPR001469ATPase, F1 complex, delta/epsilon subunitTIGRFAMsTIGR01216TIGR01216coord: 10..100
score: 8.1
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPRODOMPD000944coord: 10..57
score: 3.
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalGENE3DG3DSA:2.60.15.10coord: 11..58
score: 1.
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalPFAMPF02823ATP-synt_DE_Ncoord: 10..51
score: 7.
IPR020546ATPase, F1 complex, delta/epsilon subunit, N-terminalunknownSSF51344Epsilon subunit of F1F0-ATP synthase N-terminal domaincoord: 11..52
score: 1.4
IPR020547ATP synthase delta/epsilon subunit, C-terminal domainPFAMPF00401ATP-synt_DEcoord: 56..99
score: 2.
NoneNo IPR availableunknownCoilCoilcoord: 66..86
scor
NoneNo IPR availablePANTHERPTHR13822:SF8ATP SYNTHASE EPSILON CHAIN, CHLOROPLASTICcoord: 10..100
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G001850Cucurbita moschata (Rifu)cmacmoB653
CmaCh03G001850Cucurbita moschata (Rifu)cmacmoB668
CmaCh03G001850Watermelon (Charleston Gray)cmawcgB593
CmaCh03G001850Watermelon (97103) v1cmawmB642
CmaCh03G001850Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G001850Cucurbita pepo (Zucchini)cmacpeB672
CmaCh03G001850Bottle gourd (USVL1VR-Ls)cmalsiB601
CmaCh03G001850Silver-seed gourdcarcmaB0812
CmaCh03G001850Silver-seed gourdcarcmaB1427
CmaCh03G001850Watermelon (97103) v2cmawmbB692
CmaCh03G001850Wax gourdcmawgoB0793
CmaCh03G001850Cucurbita maxima (Rimu)cmacmaB524