CmaCh03G001780 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh03G001780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	DNA-binding protein BIN4
Location	Cma_Chr03 : 2350330 .. 2354312 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGTAATTTTGTCTACTTGACGGTTTTGTTTCACTATTATAGATCACTCTTCACGTGGATTTGAGTTTTCCAAGTTTTCTATTCATATATGAACTTCAAAAACTGTCTTCCCAGATAATTTTGAACAATAGCCAGGGGTTTCAACTCTACGTTCTTGCTTTTCAAAAGGCTGATTTGTAGGTGTAAGAACTATCATACTCATTCTTCCCAAAAGTTGTTCAAAGAGTTGTCTTAAAGAGGAGAAATAAAAATCATATATTTGTGACACTGATACTAAGGTTAAGATACAAGTTTTCAGCATGTTTCTCCTTCTAGAGTTTGTATGTTTGAATTGTCTTTAAAGGTTTGAAATCGTGAAGAAATTATTGCAGAGTTATTTACTAGTATATGTCTTCATCTTCATTATCAATCCTGCACTTTGTGATCATTTCAAAGTTCATATCTTTTTCATGATAATTGAGACCAACAAGAACAATTTACTTTGTTGAATAGGCACCAACTAGTGCTGCCCTATCCTCTAATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGATGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCTCACAAGATTCAGATGGAGATCAGATTCAAGGTATATCAAAGTTAAACTTAATAAGTCTCAGTTCTCATCTTGTAGGAACATTGTCTGGCACCCAAGAGGAAATGAAATTAAAGGAAAGAGAGAAATCATGTTTATAAAGGGCTTTGGTTTTGGTGTTACTCTAATAATCCTAAGCTGGAAACTTTAATGACCTTATGTGGATTCCTAACTACTAGGACTTGGATTATCATCCTTAAATTATGCTTTCTGGATCAATAACTCTTTTGTCTGATTGTTATAATGCAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGGAATGAAGTGAGAGAATTTACTTCTGGATTTTTACTTTTGTGAGTGTGTGTATTATTAGGAATATTAGTAATCTTCATCTAATTTGTTTCAAGAGTTCTACATAGTACGGGATGGTTGGGATAACTTTTTAATATTCTAGTCTAAATTGTTTGTAGTAAAATCTACTTTTCTGATGGGAGATTCTTGTTTTCATTTATCAGATCTCAAAGCAGTCAGTTTTGATGTTAACATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCACAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGTAATGCATAACATTAAAAGGTAGAAGCTCTAGTGACTCGTGAAGAAAACATTAAAATTACTCGAGTCTTGATCTTGTATGCTGCATCATGCATGAAAGCTACTGCCTGTTATGCATGATTTTGTATTGGAATATTTTGTGAAAAACTTTCGTCCATTCAGGTTCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTAAGATTTAAGCTCAAACTAAAAAGAACAAACCTATATAGTTCATTATACTCTGACCACTTATTTTCTTTTACAATTCAATTTACAGGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGAAAAAGTTCAAAGATTGAAGGTAGTGTTGCAACATAGATTACGATAAACGAGTTCTTTTGGCAGCTGCCTCTTGTCATGATTTAGGTTTTAAACCTTTCTGCTTCATTATATACGCATATATATATAAGTGAGGTTCATTCTATTATGGGCCCGTGTACATCTTTTTTAGTTTCTGAGTCGGGTTTTGGAGGGAAGAGGGGAAGTGAAGAAAGAATATTTAATACAAGATTGTAAAAACTGTTGTCTTATGCAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTCTCCGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTACATTTCATTCATATGTGCTATGTTTTTCCATTAAGGGTCAGGTGTACTTCAACATATGTTTGCAAATGTTTATTTATTCCATACTCGTGATTAATGTCAAGTTTCTATATCGTTCTTTCTGACCTCGTTGTCTTATTTCAAAGATATTGGTATGTCTTGCCATTGTTGGTAACTTGCCTTGGTTTCCCAACTCAGGTACAATTTATAGAGCGGCAGTTGTTCCTTCAAGGACATTTTGCGTTGTATGTTATCATTCTCCACTTTTCTGATTCTTCAAATGGAACTTTTTTTAATTACAAACTCCGTACGTGAAAGTCATGTTGAAATGAAAGACCCTTTTTTATTGCTTTTTATTGTTCCAAAATGAATTATTTAAGAAATTTTCCACCTGGCTTTGTTGATGTAGATCTTGTCTTGTTCAGGTTAGCTTTGGTCAGTCGGAGGCGAAGGTCCGTCCTTTTCTCCCATCTATTACCTTGTTCACATTCTCTTGTATATTAATAATAATGTAGTTCACTAGAACGTTTACTGTGAGATCCCACATCGGTTGGTGAGAAGAACGAAACATTCTTTATAAGGGTGTGAAAATCTTCCATCAGATGTTTTTTAAAAACCTTGAGGGAAAGCCCGAAAGGGAAAGTCCAAAGAGGACAATTCCTGTCAACCGTGGGTTTGGGCCATTACAAATGGTATCAAAGCCAAACATCTGACGATGTGCCAGCGAGAAGACTGAGCCTTGAAAGGGGGTGGATACGAGGCGGTGTGCTAACAAGGATGCTAGGTCCCGAAGGGGAGTGGTTGGGGAGTCTCATATTGATTGGGGAAGGGAACAAGTGCCAACGAGGACGTTGGCCTTGAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAATGAAACATTCTTACATTTATAGTTGATTTCTCGTGCATTTACTCCATTTTCCTTATTAAGCACCTCTTTGTTTTTCGTTTGCTGTATTTTTCAATACATTGTCCTAGAACTGCCATAGAAAATATGACTTGTTGGACGTATGCCACTTGATCAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAATGTTGATGAGGCTGAAACCATGGTTGAAGGTTGGGTTGACTTGCTTTGAAATTAATACCATTGTCAATTTCTCTAACTTGTTCTATCCTCATTCAATCTGCTTCATCCATAGGAACATTGGATGGCTTCTCATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTGCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCAGTACGTCTCTTTCTAAGCTTTGATATTCAATTGCTTATATATGTGTCTTTCTAAGCTTTGATATTCAATTGCTTATGTTATCTGTTGAATGAGTGTATGATTATGAACCGGAAATGGGCAATGTAGGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGTGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCCAAGACTAAAAGTACAAAGAGCAAGAAATGAGGTTTGAATTTTTGTTGTATGCTTATGATCCGAGGTGGTCAAATGGTTGTTTCTTATTGTACCCATTAGGCAAAATGGATGAGATTCGTACCTTAGTTCTCGAGAACCCAACCCAACACGATATTGAATTAATAACTCTTTGTCTCTCTCTCTGTTCTACACGAGATTGAATTAATAATTGTAATGATGAAGTATGCTTTTCCATCGTTC

mRNA sequence

ATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGCACCAACTAGTGCTGCCCTATCCTCTAATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGATGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCTCACAAGATTCAGATGGAGATCAGATTCAAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGGAATGAAATCTCAAAGCAGTCAGTTTTGATGTTAACATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCACAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGTTCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGAAAAAGTTCAAAGATTGAAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTCTCCGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTACAATTTATAGAGCGGCAGTTGTTCCTTCAAGGACATTTTGCGTTGTTAGCTTTGGTCAGTCGGAGGCGAAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAATGTTGATGAGGCTGAAACCATGGTTGAAGGAACATTGGATGGCTTCTCATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTGCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCAGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGTGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCCAAGACTAAAAGTACAAAGAGCAAGAAATGAGGTTTGAATTTTTGTTGTATGCTTATGATCCGAGGTGGTCAAATGGTTGTTTCTTATTGTACCCATTAGGCAAAATGGATGAGATTCGTACCTTAGTTCTCGAGAACCCAACCCAACACGATATTGAATTAATAACTCTTTGTCTCTCTCTCTGTTCTACACGAGATTGAATTAATAATTGTAATGATGAAGTATGCTTTTCCATCGTTC

Coding sequence (CDS)

ATGAGCAGCTCGAGAGAGCAGTCTCCGGATTGGATGCGTTCTTTCCAAGCACCAACTAGTGCTGCCCTATCCTCTAATTCTGAATCTTCAACGAATGGTAGCTTATCAATGGATGATTCAATTGATCAAAAGGGTCCATCTTCACTTAAAACCTCACAAGATTCAGATGGAGATCAGATTCAAGGGGACAGTGACAACCATAATCTGGCAAAGGAAGTGAAACTTGAGGAACGTACAGGGAATGAAATCTCAAAGCAGTCAGTTTTGATGTTAACATCGGATTCTGAGTTATCGCCTGTTAATAGTTTTATAAAGGAGGATTATGGTCATCATGAAGAATTATCTGAACTTACGACATCTCACTTCCAAGGGAGAGGGAAGGATGAAAATGCAGGTGGAAAATCTAAATCAAGGAAAATATCAGATAAAAAGTTGTCAAAAAAACAGGTCAAATCACAAGTTTGCACTTCGCCCGAAGAGAAGATAGTCATTTCTGATACAAATAAAGAACGACTTACGTTGGAAGGTTCTGAATGCTATGTAAGCAATGGTGGAGATGTGGAGATCATAGAAAAAGATGCATTGGATGACTGCAACGAACGTCCTGTTTCCTCCTCAAGGTTGCCATTGGTGCTGTCTGAAAAAGTTCAAAGATTGAAGGCACTTGTTGAGTGTGAAGGAAATTCAATAGATTTGAGTGGTGACATGGGTGCTGTAGGACGAATTGTAGTCTCCGATTCCTCATTTGCAAAAAATGAACTTTGCCTCGATTTGAAAGGTACAATTTATAGAGCGGCAGTTGTTCCTTCAAGGACATTTTGCGTTGTTAGCTTTGGTCAGTCGGAGGCGAAGATAGAATCTATCATGAATGACTTCATACAGCTGAAGGCACTCTCCAATGTTGATGAGGCTGAAACCATGGTTGAAGGAACATTGGATGGCTTCTCATTTGATTCTGAAGATGAGGGCGAGAAAATAAGTAAAGTTGCAACAGACCAAAACGAGCCTGCCGAAGCGCTCAACAAAAAATCTAAAAATAAAGACGAAAAATCATCAGGGCGGAAGCGTGTTAAAACAGGAGGAAAGGTGCAGGCACCCAAGAAAGCGAGGAAGAAAGTTCAAGGTTCCAAGACTAAAAGTACAAAGAGCAAGAAATGA

Protein sequence

MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFSFDSEDEGEKISKVATDQNEPAEALNKKSKNKDEKSSGRKRVKTGGKVQAPKKARKKVQGSKTKSTKSKK

Homology

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BLAST of CmaCh03G001780 vs. Swiss-Prot
Match: BIN4_ARATH (DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2)

HSP 1 Score: 156.0 bits (393), Expect = 8.4e-37
Identity = 148/387 (38.24%), Postives = 201/387 (51.94%), Query Frame = 1


Query: 15  FQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQIQGDSDNHNLAKEVK 74
           F     A  S N E S  G  +  +++D +  SS         D +   S +   +  +K
Sbjct: 86  FSRKKKADASLNLEDSCAGKEN-GNNVDCEKLSSKHKDAQGGADSVWLVSSDSEPSSPIK 145

Query: 75  LEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGK 134
            E     E  K +  +L +  E   V +  KE     +  S   T   +G    E    +
Sbjct: 146 QEVTVSTE--KDADFVLEATEEEPAVKTVRKEKSPKTKSKSSRKTPK-EGNSAQEILKTE 205

Query: 135 SK------SRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVE 194
            K      + +++ +K  K + KS   T  EE        +E L  E  +    +     
Sbjct: 206 DKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCA-----QEILKTEDKD---KDTDTDT 265

Query: 195 IIEKDALDDCNERPVS--SSRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 254
           II ++   D   +P S  SSRLPLVLSEKV R K LVECEG+SIDLSGDMGAVGR+VVSD
Sbjct: 266 IIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSD 325

Query: 255 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 314
           ++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDFIQL   SNV EAET
Sbjct: 326 TT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEAET 385

Query: 315 MVEGTLDGFSFDSEDEGEKISKVAT--------DQNEPAEALNKKSKNKDEKSSGRKRVK 374
           MVEGTL+GF+F+S+DE  K +K A          + E       K+K K E   G+KR +
Sbjct: 386 MVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKAKAKGETVIGKKRGR 445

Query: 375 TGGKVQAPKKARKKVQGSKTKSTKSKK 386
              + Q P    KK + S  K  K+KK
Sbjct: 446 PSKEKQPP---AKKARNSAPKKPKAKK 454

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BLAST of CmaCh03G001780 vs. TrEMBL
Match: A0A0A0LJZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338790 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 2.7e-135
Identity = 280/371 (75.47%), Postives = 310/371 (83.56%), Query Frame = 1


Query: 12  MRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQIQGDSDNHNLAK 71
           MRSFQAPT  ALSSNS SS NGS SMD++IDQ+ PSS KT+QD DGDQIQGD  NHNLAK
Sbjct: 1   MRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAK 60

Query: 72  EVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENA 131
           EVKL+  TG+E SK SV ML+ DSE    N+FIKEDY +HEEL+EL TS  QGR KDENA
Sbjct: 61  EVKLDRHTGHENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATSEIQGRRKDENA 120

Query: 132 G-----GKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGD 191
           G     GKSKSRK+S++   KK+VKS+VCTS +E I+ S TNK   T+EGSE +V N GD
Sbjct: 121 GRRFTEGKSKSRKVSNEMSPKKKVKSEVCTSAKENIMNSGTNKGGSTMEGSEGHVRN-GD 180

Query: 192 VEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 251
           VEI+EKDALDDC   PVSSSRLPLVLS+K  RLKALVECEG SIDLSGDMGAVGR+VVSD
Sbjct: 181 VEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSD 240

Query: 252 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 311
           SS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQLKALS VDEAET
Sbjct: 241 SSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAET 300

Query: 312 MVEGTLDGFSFDSEDEGEKISKVAT--DQNEPAEALNKKSKNKDEKSSGRKRVKTGGKVQ 371
           MVEGTLDGFSFDSED+ EKI+K A+  DQNEP E LN KSKNK EKSSGRKRVKTGG++Q
Sbjct: 301 MVEGTLDGFSFDSEDDAEKITKAASPADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQ 360

Query: 372 APKKARKKVQG 376
           APKK RKKVQG
Sbjct: 361 APKKTRKKVQG 370

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BLAST of CmaCh03G001780 vs. TrEMBL
Match: A0A0L9UDJ3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g117300 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.6e-66
Identity = 196/423 (46.34%), Postives = 259/423 (61.23%), Query Frame = 1


Query: 1   MSSSREQSPDWMRSFQAPTSA--ALSSNSESSTNGSLSMDDSIDQKGPS-----SLKTSQ 60
           MSSSRE SPDW+RSFQ P+ +  ALSS+S S  +G   ++D  D +G S     SLK + 
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSPLALSSDSGSLRDGKSRIEDKTDNEGSSPKSSQSLKVTG 60

Query: 61  DSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQ---------------------SVLMLT 120
                 +  + ++  L+K  KL+++  NE +K+                     SVL L+
Sbjct: 61  SKRKTPVSPEVESQTLSKRKKLDKKKANEGNKEGKKSASESNIDKNIEHKGYIHSVLTLS 120

Query: 121 SDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAG-------GKSKSRKISDKKL 180
           SDSE    +S      G H +  ++ TS  Q  G++++A        GK  S+K S++K 
Sbjct: 121 SDSESFHDHS----PKGDHTD--QVKTSQPQLSGEEDSADGLVFRNVGKYPSKKGSEEKS 180

Query: 181 SKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSS 240
           S+KQ+ +            S T  +   ++GSE   S+GGDV + E++     +E  VSS
Sbjct: 181 SQKQIDTD-----------SHTPVKGKKIKGSEKGKSSGGDVNVEEEETFGKLSESNVSS 240

Query: 241 SRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRA 300
           SRLPL+LSEKV R KAL+EC+G+SIDLSGDMGAVGRI++SDS     E+ LDLKGTIY+ 
Sbjct: 241 SRLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMYLDLKGTIYKT 300

Query: 301 AVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFSFDSEDEGEK 360
           ++VPSRTFCVVSFGQSEAKIE+IMNDFIQLK  SNV EAETMVEGTLDGF FDS++E  K
Sbjct: 301 SIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVYEAETMVEGTLDGFFFDSDEEAGK 360

Query: 361 ISKVA--TDQNEPA-EALNKKSKNKDEKSSGRKRVK---TGGKVQAPKKARKKVQGSKTK 383
           + K    TDQ E   E  N KSK K +K+SG ++ +   TGG+ QA K A+KK  GSK  
Sbjct: 361 MQKSTNQTDQQENGEEQANGKSKGKADKTSGAEKKRGRNTGGRAQA-KVAKKKTPGSKRS 405

[Close]

BLAST of CmaCh03G001780 vs. TrEMBL
Match: A0A0S3REG6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G172200 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 4.6e-66
Identity = 196/423 (46.34%), Postives = 259/423 (61.23%), Query Frame = 1


Query: 1   MSSSREQSPDWMRSFQAPTSA--ALSSNSESSTNGSLSMDDSIDQKGPS-----SLKTSQ 60
           MSSSRE SPDW+RSFQ P+ +  ALSS+S S  +G   ++D  D +G S     SLK + 
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSPLALSSDSGSLRDGKSRIEDKTDNEGSSPKSSQSLKVTG 60

Query: 61  DSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQ---------------------SVLMLT 120
                 +  + ++  L+K  KL+++  NE +K+                     SVL L+
Sbjct: 61  SKRKTPVSPEVESQTLSKRKKLDKKKANEGNKEGKKSASESNIDKNIEHKGYIHSVLTLS 120

Query: 121 SDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAG-------GKSKSRKISDKKL 180
           SDSE    +S      G H +  ++ TS  Q  G++++A        GK  S+K S++K 
Sbjct: 121 SDSESFHDHS----PKGDHTD--QVKTSQPQLSGEEDSADGLVFRNVGKYPSKKGSEEKS 180

Query: 181 SKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSS 240
           S+KQ+ +            S T  +   ++GSE   S+GGDV + E++     +E  VSS
Sbjct: 181 SQKQIDTD-----------SHTPVKGKKIKGSEKGKSSGGDVNVEEEETFGKLSESNVSS 240

Query: 241 SRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRA 300
           SRLPL+LSEKV R KAL+EC+G+SIDLSGDMGAVGRI++SDS     E+ LDLKGTIY+ 
Sbjct: 241 SRLPLMLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMYLDLKGTIYKT 300

Query: 301 AVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFSFDSEDEGEK 360
           ++VPSRTFCVVSFGQSEAKIE+IMNDFIQLK  SNV EAETMVEGTLDGF FDS++E  K
Sbjct: 301 SIVPSRTFCVVSFGQSEAKIEAIMNDFIQLKPQSNVYEAETMVEGTLDGFFFDSDEEAGK 360

Query: 361 ISKVA--TDQNEPA-EALNKKSKNKDEKSSGRKRVK---TGGKVQAPKKARKKVQGSKTK 383
           + K    TDQ E   E  N KSK K +K+SG ++ +   TGG+ QA K A+KK  GSK  
Sbjct: 361 MQKSTNQTDQQENGEEQANGKSKGKADKTSGAEKKRGRNTGGRAQA-KVAKKKTPGSKRS 405

[Close]

BLAST of CmaCh03G001780 vs. TrEMBL
Match: F6H7A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00630 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 7.3e-64
Identity = 193/410 (47.07%), Postives = 249/410 (60.73%), Query Frame = 1


Query: 1   MSSSREQSPDWMRSFQAPTSAA--LSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGD 60
           M SSRE+SPDW+  FQAPT +A  LSS+S+S    S   +D  D   P +  +   S   
Sbjct: 29  MGSSREESPDWLHCFQAPTRSALTLSSDSDSPPEDSPLREDK-DADSPFNETSKAKSPRK 88

Query: 61  QIQGDSDNHNLAKEV-KLEERTGNEISKQ----------------SVLMLTSDSELSPVN 120
           +++ +       ++V   +++ GNE  K+                SV  L+SDSE  P N
Sbjct: 89  RLKAEDPKSTKKQKVNNHKKKEGNEGRKKASVEKPSDGEPNAPNHSVWKLSSDSESCPDN 148

Query: 121 SFIKEDYGHHEELSELTTSHFQGRGKD---ENAGGKSKSRKISDKKLSKKQVKSQVCTSP 180
           S ++EDY HHEE S   T+ F  + KD      G +S   + S +K  KK+VK +   S 
Sbjct: 149 SSMREDYIHHEESSVHKTTQFPDKEKDAVLSENGQESLLNEASKEKSPKKRVKVEDHISS 208

Query: 181 EEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSEKVQR 240
           ++K   SD       ++G      +    E++E++A D   E P  SS LPLVLSEKV R
Sbjct: 209 KKKKANSD-------MKGK----GHDDGTELLEEEASDKHTE-PQVSSGLPLVLSEKVHR 268

Query: 241 LKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSF 300
            KALVECEG SIDLSGDMGAVGRIV+ D+    +E+ LDLKGTIY+  +VPSRTFC+VSF
Sbjct: 269 SKALVECEGESIDLSGDMGAVGRIVILDTPSRNHEMFLDLKGTIYKTTIVPSRTFCIVSF 328

Query: 301 GQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFSFDSEDEGEKISKVA---TDQNE 360
           GQSEAK+E++MNDFIQLK  SNV EAETMVEG L+GFSFDS+DE +K+ K +   TDQNE
Sbjct: 329 GQSEAKVEAVMNDFIQLKPQSNVYEAETMVEGILEGFSFDSDDEADKMPKASTRQTDQNE 388

Query: 361 -PAEALNKKSKNKDEKSSG--RKRVKTGGKVQAPKKARKKVQGSKTKSTK 383
              E  N K+K K EK+SG  RK+ KT G V+ PKK RKK Q  K   TK
Sbjct: 389 GDEEQTNGKTKGKAEKASGVVRKKGKTAG-VKPPKKVRKKAQVQKRTKTK 424

[Close]

BLAST of CmaCh03G001780 vs. TrEMBL
Match: V7ASS2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G040200g PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.1e-63
Identity = 190/422 (45.02%), Postives = 252/422 (59.72%), Query Frame = 1


Query: 1   MSSSREQSPDWMRSFQAPTSAAL--SSNSESSTNGSLSMDDSIDQKGPS-----SLKTSQ 60
           MSSSRE SPDW+RSFQ P+ + L  SS+S S  +G    +D  D +G S     SLK ++
Sbjct: 1   MSSSRESSPDWLRSFQVPSHSPLILSSDSGSLRDGGSRNEDKTDDEGSSPKSSQSLKITR 60

Query: 61  DSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQ---------------------SVLMLT 120
                 +  + +N   +K  KL+++   E +K+                     S   L+
Sbjct: 61  RKRKTPVSPEVENQTPSKRKKLDKKNAKEGNKEEKKSVNESNINKHTEHKESIHSAWTLS 120

Query: 121 SDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGK--SKSRKISDKKLSKKQV 180
           SDSE    +S  +ED+       ++ TS  Q  G++++A G    K R    KK SK++ 
Sbjct: 121 SDSESFHDHSPKREDH-----TDQVETSQHQISGEEDSADGLVFGKDRNCPSKKGSKEK- 180

Query: 181 KSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPL 240
                +S ++  + S T  +   ++GS    S+GGDV + E++  +   E  VSS+RLPL
Sbjct: 181 -----SSQKQVDIDSHTPVKGKKIKGSAEKKSSGGDVNVEEEETFEKLAESDVSSTRLPL 240

Query: 241 VLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPS 300
           +LSEKV R KAL+EC+G+SIDLSGDMGAVGRI++SDS     E+ LDLKGTIY+ ++VPS
Sbjct: 241 MLSEKVHRTKALIECQGDSIDLSGDMGAVGRIIISDSPSGDQEMYLDLKGTIYKTSIVPS 300

Query: 301 RTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFSFDSEDEGEKISKVA 360
           RTFCVVSFGQSEAKIE+IMNDFIQLK   NV EAETMVEGTLDGF FDS++E  K S   
Sbjct: 301 RTFCVVSFGQSEAKIEAIMNDFIQLKPQFNVYEAETMVEGTLDGFFFDSDEEAGKKSTNQ 360

Query: 361 TDQNEPA-EALNKKSKNKDEKSSGRKRVK---TGGKVQA------PKKARKKVQGSKTKS 383
           TDQNE   E  N KSK K +K+SG ++ +   TGGK QA       K A+KK  GSK   
Sbjct: 361 TDQNENGEEQANGKSKGKADKTSGAEKKRGRNTGGKPQAKVGKPQAKIAKKKTPGSKRSK 411

[Close]

BLAST of CmaCh03G001780 vs. TAIR10
Match: AT5G24630.6 (AT5G24630.6 double-stranded DNA binding)

HSP 1 Score: 156.0 bits (393), Expect = 4.7e-38
Identity = 148/387 (38.24%), Postives = 201/387 (51.94%), Query Frame = 1


Query: 15  FQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQIQGDSDNHNLAKEVK 74
           F     A  S N E S  G  +  +++D +  SS         D +   S +   +  +K
Sbjct: 86  FSRKKKADASLNLEDSCAGKEN-GNNVDCEKLSSKHKDAQGGADSVWLVSSDSEPSSPIK 145

Query: 75  LEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAGGK 134
            E     E  K +  +L +  E   V +  KE     +  S   T   +G    E    +
Sbjct: 146 QEVTVSTE--KDADFVLEATEEEPAVKTVRKEKSPKTKSKSSRKTPK-EGNSAQEILKTE 205

Query: 135 SK------SRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVE 194
            K      + +++ +K  K + KS   T  EE        +E L  E  +    +     
Sbjct: 206 DKDTDTTIAEQVTPEKSPKTKSKSSRKTPKEENCA-----QEILKTEDKD---KDTDTDT 265

Query: 195 IIEKDALDDCNERPVS--SSRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 254
           II ++   D   +P S  SSRLPLVLSEKV R K LVECEG+SIDLSGDMGAVGR+VVSD
Sbjct: 266 IIAEEVTTDQKIKPSSGSSSRLPLVLSEKVNRTKVLVECEGDSIDLSGDMGAVGRVVVSD 325

Query: 255 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 314
           ++    ++ LDLKGTIY++ ++PSRTFCVV+ GQ+EAKIE+IMNDFIQL   SNV EAET
Sbjct: 326 TT---GDMYLDLKGTIYKSTIIPSRTFCVVNVGQTEAKIEAIMNDFIQLIPQSNVYEAET 385

Query: 315 MVEGTLDGFSFDSEDEGEKISKVAT--------DQNEPAEALNKKSKNKDEKSSGRKRVK 374
           MVEGTL+GF+F+S+DE  K +K A          + E       K+K K E   G+KR +
Sbjct: 386 MVEGTLEGFTFESDDESNKNAKTAVKPADQSVGTEEETNTKAKPKAKAKGETVIGKKRGR 445

Query: 375 TGGKVQAPKKARKKVQGSKTKSTKSKK 386
              + Q P    KK + S  K  K+KK
Sbjct: 446 PSKEKQPP---AKKARNSAPKKPKAKK 454

[Close]

BLAST of CmaCh03G001780 vs. NCBI nr
Match: gi|659121791|ref|XP_008460815.1| (PREDICTED: DNA-binding protein BIN4 isoform X2 [Cucumis melo])

HSP 1 Score: 528.5 bits (1360), Expect = 9.9e-147
Identity = 304/393 (77.35%), Postives = 333/393 (84.73%), Query Frame = 1


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSSNS SS NGS SMD++IDQ+ PSS KT+QD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKE KL+ RTG+E S+ SV ML+SDSE    N+FIKED  HHEELSEL TS
Sbjct: 61  QGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSDNNFIKEDCNHHEELSELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S +   KK++KSQVCTS +EKI+ SDTNK  LTLE
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVCTSAKEKIINSDTNKGGLTLE 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGD 240
           GSE +V NG + EI+EKDALDDC   PVSSSRLPLVLS+KV RLKALVECEG SIDLSGD
Sbjct: 181 GSEGFVRNGEE-EILEKDALDDCIVPPVSSSRLPLVLSDKVHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQL 300
           MGAVGR+VVSDSS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQL
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQL 300

Query: 301 KALSNVDEAETMVEGTLDGFSFDSEDEGEKISKVAT---DQNEPAEALNKKSKNKDEKSS 360
           KALS VDEAETMVEGTLDGFSFDSEDE EKI+KVA+   DQNEP E LN KSKNK EKSS
Sbjct: 301 KALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSS 360

Query: 361 GRKRVKTGGKVQAPKKARKKVQGSKTKSTKSKK 386
           GRKRVK+GG++QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 GRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 392

[Close]

BLAST of CmaCh03G001780 vs. NCBI nr
Match: gi|449459184|ref|XP_004147326.1| (PREDICTED: DNA-binding protein BIN4 [Cucumis sativus])

HSP 1 Score: 521.2 bits (1341), Expect = 1.6e-144
Identity = 299/392 (76.28%), Postives = 330/392 (84.18%), Query Frame = 1


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSSNS SS NGS SMD++IDQ+ PSS KT+QD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKEVKL+  TG+E SK SV ML+ DSE    N+FIKEDY +HEEL+EL TS
Sbjct: 61  QGDCGNHNLAKEVKLDRHTGHENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S++   KK+VKS+VCTS +E I+ S TNK   T+E
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSNEMSPKKKVKSEVCTSAKENIMNSGTNKGGSTME 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGD 240
           GSE +V N GDVEI+EKDALDDC   PVSSSRLPLVLS+K  RLKALVECEG SIDLSGD
Sbjct: 181 GSEGHVRN-GDVEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQL 300
           MGAVGR+VVSDSS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQL
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQL 300

Query: 301 KALSNVDEAETMVEGTLDGFSFDSEDEGEKISKVAT--DQNEPAEALNKKSKNKDEKSSG 360
           KALS VDEAETMVEGTLDGFSFDSED+ EKI+K A+  DQNEP E LN KSKNK EKSSG
Sbjct: 301 KALSKVDEAETMVEGTLDGFSFDSEDDAEKITKAASPADQNEPVEGLNTKSKNKAEKSSG 360

Query: 361 RKRVKTGGKVQAPKKARKKVQGSKTKSTKSKK 386
           RKRVKTGG++QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 RKRVKTGGRLQAPKKTRKKVQGSKTKNAKSKK 391

[Close]

BLAST of CmaCh03G001780 vs. NCBI nr
Match: gi|659121789|ref|XP_008460814.1| (PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo])

HSP 1 Score: 518.5 bits (1334), Expect = 1.0e-143
Identity = 304/408 (74.51%), Postives = 333/408 (81.62%), Query Frame = 1


Query: 1   MSSSREQSPDWMRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQI 60
           MSSSREQSPDWMRSFQAPT  ALSSNS SS NGS SMD++IDQ+ PSS KT+QD DGDQI
Sbjct: 1   MSSSREQSPDWMRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQI 60

Query: 61  QGDSDNHNLAKEVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTS 120
           QGD  NHNLAKE KL+ RTG+E S+ SV ML+SDSE    N+FIKED  HHEELSEL TS
Sbjct: 61  QGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSESCSDNNFIKEDCNHHEELSELATS 120

Query: 121 HFQGRGKDENAG-----GKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLE 180
             QGR KDENAG     GKSKSRK+S +   KK++KSQVCTS +EKI+ SDTNK  LTLE
Sbjct: 121 EIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIKSQVCTSAKEKIINSDTNKGGLTLE 180

Query: 181 GSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGD 240
           GSE +V N G+ EI+EKDALDDC   PVSSSRLPLVLS+KV RLKALVECEG SIDLSGD
Sbjct: 181 GSEGFVRN-GEEEILEKDALDDCIVPPVSSSRLPLVLSDKVHRLKALVECEGTSIDLSGD 240

Query: 241 MGAVGRIVVSDSSFAKNELCLDLK---------------GTIYRAAVVPSRTFCVVSFGQ 300
           MGAVGR+VVSDSS AKNELCLDLK               GT+YRA +VPSRTFC+VSFGQ
Sbjct: 241 MGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGSKRSGTLYRAVIVPSRTFCIVSFGQ 300

Query: 301 SEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFSFDSEDEGEKISKVAT---DQNEPA 360
           SEAKIESIMNDFIQLKALS VDEAETMVEGTLDGFSFDSEDE EKI+KVA+   DQNEP 
Sbjct: 301 SEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFSFDSEDEAEKITKVASSPADQNEPV 360

Query: 361 EALNKKSKNKDEKSSGRKRVKTGGKVQAPKKARKKVQGSKTKSTKSKK 386
           E LN KSKNK EKSSGRKRVK+GG++QAPKK RKKVQGSKTK+ KSKK
Sbjct: 361 EGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKVQGSKTKNAKSKK 407

[Close]

BLAST of CmaCh03G001780 vs. NCBI nr
Match: gi|700207116|gb|KGN62235.1| (hypothetical protein Csa_2G338790 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 3.9e-135
Identity = 280/371 (75.47%), Postives = 310/371 (83.56%), Query Frame = 1


Query: 12  MRSFQAPTSAALSSNSESSTNGSLSMDDSIDQKGPSSLKTSQDSDGDQIQGDSDNHNLAK 71
           MRSFQAPT  ALSSNS SS NGS SMD++IDQ+ PSS KT+QD DGDQIQGD  NHNLAK
Sbjct: 1   MRSFQAPTGVALSSNSGSSKNGSSSMDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAK 60

Query: 72  EVKLEERTGNEISKQSVLMLTSDSELSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENA 131
           EVKL+  TG+E SK SV ML+ DSE    N+FIKEDY +HEEL+EL TS  QGR KDENA
Sbjct: 61  EVKLDRHTGHENSKHSVWMLSLDSESCSDNNFIKEDYSYHEELAELATSEIQGRRKDENA 120

Query: 132 G-----GKSKSRKISDKKLSKKQVKSQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGD 191
           G     GKSKSRK+S++   KK+VKS+VCTS +E I+ S TNK   T+EGSE +V N GD
Sbjct: 121 GRRFTEGKSKSRKVSNEMSPKKKVKSEVCTSAKENIMNSGTNKGGSTMEGSEGHVRN-GD 180

Query: 192 VEIIEKDALDDCNERPVSSSRLPLVLSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSD 251
           VEI+EKDALDDC   PVSSSRLPLVLS+K  RLKALVECEG SIDLSGDMGAVGR+VVSD
Sbjct: 181 VEILEKDALDDCIGPPVSSSRLPLVLSDKAHRLKALVECEGTSIDLSGDMGAVGRVVVSD 240

Query: 252 SSFAKNELCLDLKGTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAET 311
           SS AKNELCLDLKGT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQLKALS VDEAET
Sbjct: 241 SSSAKNELCLDLKGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAET 300

Query: 312 MVEGTLDGFSFDSEDEGEKISKVAT--DQNEPAEALNKKSKNKDEKSSGRKRVKTGGKVQ 371
           MVEGTLDGFSFDSED+ EKI+K A+  DQNEP E LN KSKNK EKSSGRKRVKTGG++Q
Sbjct: 301 MVEGTLDGFSFDSEDDAEKITKAASPADQNEPVEGLNTKSKNKAEKSSGRKRVKTGGRLQ 360

Query: 372 APKKARKKVQG 376
           APKK RKKVQG
Sbjct: 361 APKKTRKKVQG 370

[Close]

BLAST of CmaCh03G001780 vs. NCBI nr
Match: gi|659121793|ref|XP_008460816.1| (PREDICTED: DNA-binding protein BIN4 isoform X3 [Cucumis melo])

HSP 1 Score: 467.6 bits (1202), Expect = 2.1e-128
Identity = 273/372 (73.39%), Postives = 302/372 (81.18%), Query Frame = 1


Query: 37  MDDSIDQKGPSSLKTSQDSDGDQIQGDSDNHNLAKEVKLEERTGNEISKQSVLMLTSDSE 96
           MD++IDQ+ PSS KT+QD DGDQIQGD  NHNLAKE KL+ RTG+E S+ SV ML+SDSE
Sbjct: 1   MDNAIDQRDPSSHKTTQDLDGDQIQGDCGNHNLAKEGKLDRRTGHENSEHSVWMLSSDSE 60

Query: 97  LSPVNSFIKEDYGHHEELSELTTSHFQGRGKDENAG-----GKSKSRKISDKKLSKKQVK 156
               N+FIKED  HHEELSEL TS  QGR KDENAG     GKSKSRK+S +   KK++K
Sbjct: 61  SCSDNNFIKEDCNHHEELSELATSEIQGRRKDENAGRRFTEGKSKSRKVSKEMSPKKKIK 120

Query: 157 SQVCTSPEEKIVISDTNKERLTLEGSECYVSNGGDVEIIEKDALDDCNERPVSSSRLPLV 216
           SQVCTS +EKI+ SDTNK  LTLEGSE +V N G+ EI+EKDALDDC   PVSSSRLPLV
Sbjct: 121 SQVCTSAKEKIINSDTNKGGLTLEGSEGFVRN-GEEEILEKDALDDCIVPPVSSSRLPLV 180

Query: 217 LSEKVQRLKALVECEGNSIDLSGDMGAVGRIVVSDSSFAKNELCLDLK------------ 276
           LS+KV RLKALVECEG SIDLSGDMGAVGR+VVSDSS AKNELCLDLK            
Sbjct: 181 LSDKVHRLKALVECEGTSIDLSGDMGAVGRVVVSDSSSAKNELCLDLKGKFHPNMLCFGS 240

Query: 277 ---GTIYRAAVVPSRTFCVVSFGQSEAKIESIMNDFIQLKALSNVDEAETMVEGTLDGFS 336
              GT+YRA +VPSRTFC+VSFGQSEAKIESIMNDFIQLKALS VDEAETMVEGTLDGFS
Sbjct: 241 KRSGTLYRAVIVPSRTFCIVSFGQSEAKIESIMNDFIQLKALSKVDEAETMVEGTLDGFS 300

Query: 337 FDSEDEGEKISKVAT---DQNEPAEALNKKSKNKDEKSSGRKRVKTGGKVQAPKKARKKV 386
           FDSEDE EKI+KVA+   DQNEP E LN KSKNK EKSSGRKRVK+GG++QAPKK RKKV
Sbjct: 301 FDSEDEAEKITKVASSPADQNEPVEGLNTKSKNKAEKSSGRKRVKSGGRLQAPKKTRKKV 360

The following BLAST results are available for this feature:

BLAST of CmaCh03G001780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BIN4_ARATH	8.4e-37	38.24	DNA-binding protein BIN4 OS=Arabidopsis thaliana GN=BIN4 PE=1 SV=2	[more]

BLAST of CmaCh03G001780 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJZ5_CUCSA	2.7e-135	75.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338790 PE=4 SV=1	[more]
A0A0L9UDJ3_PHAAN	4.6e-66	46.34	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan04g117300 PE=4 SV=1	[more]
A0A0S3REG6_PHAAN	4.6e-66	46.34	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.02G172200 PE=...	[more]
F6H7A6_VITVI	7.3e-64	47.07	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g00630 PE=4 SV=...	[more]
V7ASS2_PHAVU	2.1e-63	45.02	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G040200g PE=4 SV=1	[more]

BLAST of CmaCh03G001780 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24630.6	4.7e-38	38.24	double-stranded DNA binding	[more]

BLAST of CmaCh03G001780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121791\|ref\|XP_008460815.1\|	9.9e-147	77.35	PREDICTED: DNA-binding protein BIN4 isoform X2 [Cucumis melo]	[more]
gi\|449459184\|ref\|XP_004147326.1\|	1.6e-144	76.28	PREDICTED: DNA-binding protein BIN4 [Cucumis sativus]	[more]
gi\|659121789\|ref\|XP_008460814.1\|	1.0e-143	74.51	PREDICTED: DNA-binding protein BIN4 isoform X1 [Cucumis melo]	[more]
gi\|700207116\|gb\|KGN62235.1\|	3.9e-135	75.47	hypothetical protein Csa_2G338790 [Cucumis sativus]	[more]
gi\|659121793\|ref\|XP_008460816.1\|	2.1e-128	73.39	PREDICTED: DNA-binding protein BIN4 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0009330	DNA topoisomerase complex (ATP-hydrolyzing)

Vocabulary: **Biological Process**
Term	Definition
GO:0042023	DNA endoreduplication

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
biological_process	GO:0016043	cellular component organization
biological_process	GO:0042023	DNA endoreduplication
biological_process	GO:0048731	system development
biological_process	GO:0009888	tissue development
cellular_component	GO:0009330	DNA topoisomerase complex (ATP-hydrolyzing)
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G001780.1	CmaCh03G001780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34810	FAMILY NOT NAMED	coord: 1..384 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh03G001780	Wax gourd	cmawgoB0793
CmaCh03G001780	Cucurbita maxima (Rimu)	cmacmaB524
CmaCh03G001780	Cucurbita moschata (Rifu)	cmacmoB653
CmaCh03G001780	Cucurbita moschata (Rifu)	cmacmoB668
CmaCh03G001780	Watermelon (Charleston Gray)	cmawcgB593
CmaCh03G001780	Watermelon (97103) v1	cmawmB642
CmaCh03G001780	Cucurbita pepo (Zucchini)	cmacpeB656
CmaCh03G001780	Cucurbita pepo (Zucchini)	cmacpeB672
CmaCh03G001780	Bottle gourd (USVL1VR-Ls)	cmalsiB601
CmaCh03G001780	Silver-seed gourd	carcmaB0812
CmaCh03G001780	Silver-seed gourd	carcmaB1427
CmaCh03G001780	Watermelon (97103) v2	cmawmbB692