CmaCh03G000490 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G000490
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionMitochondrial glycoprotein family protein
LocationCma_Chr03 : 432280 .. 435424 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAGATTGAGGCATGTTGGAGAGTGAGAGGACGCCGCTGGGAGAAGGGACAAGTAGAGGAATGCCGAGGGCTAATCAAATATTCCGCAAGGCTCGTAAAGCCCTTCATGATCTCGACCTCCTCAAGATTTTGCAATCGGAGATAAACCACGAGCTTTCTTCCACTTCATTTCAGGTCCTTTTCAATTTCCTCGCATCTTTTCAATCACTTCAATAAACAAACAAATCATCGCTGCTTTCTGAACTGAATTTAATCGCAGAACCATGAACAAAAGGGCAGTTCCAGCGATTTCGCTGTGGAACATGATTCGCTCAAATCCCGAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGATCGCAATTTCTGCCCTATCGGGTCCTCTCATTTTTGGACGAGAAGGGGCTTTTTCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAACTCCCTCTTGCAGTTTGATTGTGGGGTTTCAGAGGATGGTCATGGTGGATCTCCTTTCAAAATCTACAATGCCTATTATCTTCAATCATCTGCTTGTTTGGGCCCTTCTGTTTACAGAGGCCCTTTGTTCAGGTACTACTTTTTGGCAACTCTAGTAACCATTTGTGTTTTGATTGCCTTGTTTTAGAAGCTAGAAATTCTTGAGTTCTCTATGTTTACTGATTTCAAATTGGGACTGTGACTTGGATATAGAATTTTCATCTGTTGAGATTGGTCTCTTGGTTATATCTTGAAAAGAGTGTTATGACATGAGAAGATGAATAGGGATGGCTTTTCGCTTAATTCCTTCAACATTTTTCTTTTGAGAGCTCTGTCGGGTGAAAGTTGTAGGCTGTCTCTTGGGGCTGGTTGTTTTTATTGAATTCTTGTAATTTGGGATCCTATTCATCATACATTCGTCGAACCTTTGCGCCACCCTCCTTGTAGAAGGCACTAGGTTGATTCCACTGCACAATTTATGGAATCTTACTGCCAAAGTAAAGTAATGTGTGTACTGTTGATGATTGTTGGGAGAGAAGTTCCACTTCAGCTAATTAAGGGGTTGATCATGGGTTTATAAGTATGGAATACATCTCCATTGGTAGAAGGCCTTTTGGGGAAATAAAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATTATATTATTGTGGAGGTCCATGGTACTAGAGTTATGCCCTTAACTTAGCATTGTCAATAAAATCCTCAAACGTCGAATAGATGTAGTCAAAAGTGACTAAAGTGTTGAACAAAGGGTATACTTTGTTCGAGGGCTCCAAAGAAGGAGTCGAGCCTCGATTAAGGAGAGGTTGTTCGAGGGCTCCATTGGTCTTAGGGTAGGCTCTATGGTGTACTTTGTTCAAGGAGAGGATTGTTGGGAGAGAAGTCCCACATCAGCTAATGAAGGGGTTGATCATGGGTTTATAAGGAATACCTCTCTGTTGGTATGAAGCCTTTTGGGGAAATTAAAAGCAAAGCTATGAGAGCTTATGCTCAAAGTGGACAATATCATATTATTGTGGAGGTTCGTGATTCCTAACCTGCTGTTACCATTTTTATTTTCCTTTGAGGAGTTAGTTATTGCTTTTGAAGTTCAAGTTGCAAGCTATTTCTTCATGTTGGTTAATAGTCTCTCTAGGAGCAAAATATTTTACGATTTACTAGAGCTCCTCCAAAATTACTAGAGCTCCTCCAAAATAATATATCTTGGTTAACGGTCTTCTTATCACTTTTAAAGTTCAAGTTCCTAACTTTTACGATTTACTAGAACTTGTTTGTTTTGTCTCATTGTCTTCAAGAGCCTCTATGTAATTCCCCATAGCCGTTGGAGTTTATATTATCTTCACATCCTCTTCTTCTTGTATGATCCTTGCTTGGTTAGAAATAAGACAGTTTACACCAAGATATAGCTTGGTAAACAACATTGTCGAAAAGTTTTGTGTGGGTCTGTGTCTTTTCTGTAAATATTCTCTGATTTCATTCTTTCCACATATTCCAAAAGAAAATCATGATGAATTTTTTCCATAGTAGGGATTTTGCATTTTTGAAAAGGTGGTATGTTAAGGCCATATCCAAAAAATCCTTTTCCTCCCTAGGAAATGTGAGATGACATCTGAATATGTGGAGAATCGTTGTCTAAAAATTCTGAGCATATGTGCATTGCATAAACAAGTAGCTTTGTCATTCGTTTTCTTTCTTGCATAATGGACACCAATTTGGAGAAAGTTGTTTGTGAATGGCTTATTTTGATTTCTACTTTGCTAAGCATCATGATTCATGATATTTAGTCAGTCATTCTCCAATCTTTCAGCTAGGCTTTGTCATTCATCTAATGCATAAGCTTTACCTGTTTTCTCTAGCTTTCTTCTCTCAGATACTTAAAACTTCTGTATCCATGGCAGCTCGTTAGATCCCGAGTTACAAAAAGCACTCAAGGGATTCCTAATCAGTAGAGGTGTTGAAGAAAGCCTGACCGACTTCCTTCTCATTCACCTGCATAAAAAGGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATCGCAAAAAGACAACAAAACGAACTTTAACAACTTCACTTGGTAGCATAGATACCTGATTTTCATATGGGAAGAGAATGCCTGATTATAAGCGCAGGCTTTGATCATTTAGATTGATTGCTAAATGAGATATTTCTTTCATTCTGCTTGCATTTTGTGTTTCTGCAAGTGAATCCTGTTTCTTGCACTTGGAACATTCTTGACAGATTTGTTTGTCAGAACAAACATGTGGTACTCGTTTAGTTATGAGCCAAGGGTTCTATATCGATGTCTCAAATGATTATTGGAACTCATTGAGCTATGACAACAATCTTATGTAGCTCATAATGCAGGTTTATTGAATTTTGTAGCCTATAATGAGTTGTTTTTGTTTCAAAAGAAGTTTATGCTCTTATGGTAATAAGAGAAAAAGAATTGATGAAAAAGTGCATATGCTTGCATTTGCCTAGCGCTCTATGCATCTTTCTTGATACACATTTGTTTTAGCCGAATGATGACTCGTTTTTATATTTTTTTTTCTTCATGTTTTTATAACCATGCTTTTAAACTTCACAAAATTTTACAGGAG

mRNA sequence

CCGAGATTGAGGCATGTTGGAGAGTGAGAGGACGCCGCTGGGAGAAGGGACAAGTAGAGGAATGCCGAGGGCTAATCAAATATTCCGCAAGGCTCGTAAAGCCCTTCATGATCTCGACCTCCTCAAGATTTTGCAATCGGAGATAAACCACGAGCTTTCTTCCACTTCATTTCAGAACCATGAACAAAAGGGCAGTTCCAGCGATTTCGCTGTGGAACATGATTCGCTCAAATCCCGAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGATCGCAATTTCTGCCCTATCGGGTCCTCTCATTTTTGGACGAGAAGGGGCTTTTTCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAACTCCCTCTTGCAGTTTGATTGTGGGGTTTCAGAGGATGGTCATGGTGGATCTCCTTTCAAAATCTACAATGCCTATTATCTTCAATCATCTGCTTGTTTGGGCCCTTCTGTTTACAGAGGCCCTTTGTTCAGCTCGTTAGATCCCGAGTTACAAAAAGCACTCAAGGGATTCCTAATCAGTAGAGGTGTTGAAGAAAGCCTGACCGACTTCCTTCTCATTCACCTGCATAAAAAGGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATCGCAAAAAGACAACAAAACGAACTTTAACAACTTCACTTGGTAGCATAGATACCTGATTTTCATATGGGAAGAGAATGCCTGATTATAAGCGCAGGCTTTGATCATTTAGATTGATTGCTAAATGAGATATTTCTTTCATTCTGCTTGCATTTTGTGTTTCTGCAAGTGAATCCTGTTTCTTGCACTTGGAACATTCTTGACAGATTTGTTTGTCAGAACAAACATGTGGTACTCGTTTAGTTATGAGCCAAGGGTTCTATATCGATGTCTCAAATGATTATTGGAACTCATTGAGCTATGACAACAATCTTATGTAGCTCATAATGCAGGTTTATTGAATTTTGTAGCCTATAATGAGTTGTTTTTGTTTCAAAAGAAGTTTATGCTCTTATGGTAATAAGAGAAAAAGAATTGATGAAAAAGTGCATATGCTTGCATTTGCCTAGCGCTCTATGCATCTTTCTTGATACACATTTGTTTTAGCCGAATGATGACTCGTTTTTATATTTTTTTTTCTTCATGTTTTTATAACCATGCTTTTAAACTTCACAAAATTTTACAGGAG

Coding sequence (CDS)

ATGTTGGAGAGTGAGAGGACGCCGCTGGGAGAAGGGACAAGTAGAGGAATGCCGAGGGCTAATCAAATATTCCGCAAGGCTCGTAAAGCCCTTCATGATCTCGACCTCCTCAAGATTTTGCAATCGGAGATAAACCACGAGCTTTCTTCCACTTCATTTCAGAACCATGAACAAAAGGGCAGTTCCAGCGATTTCGCTGTGGAACATGATTCGCTCAAATCCCGAGACGTGGTGTTGCGGCGAAAATTGGAATCGGGTGAGGAGATCGCAATTTCTGCCCTATCGGGTCCTCTCATTTTTGGACGAGAAGGGGCTTTTTCGAGGGAGATTTTGATGAAGATTTGTGTGAGTAAGCCTGGAGTTAACTCCCTCTTGCAGTTTGATTGTGGGGTTTCAGAGGATGGTCATGGTGGATCTCCTTTCAAAATCTACAATGCCTATTATCTTCAATCATCTGCTTGTTTGGGCCCTTCTGTTTACAGAGGCCCTTTGTTCAGCTCGTTAGATCCCGAGTTACAAAAAGCACTCAAGGGATTCCTAATCAGTAGAGGTGTTGAAGAAAGCCTGACCGACTTCCTTCTCATTCACCTGCATAAAAAGGAGCAAGGTCAGTATTTGAATTGGTTGCAAAATGTCGAATCTTTGATCGCAAAAAGACAACAAAACGAACTTTAA

Protein sequence

MLESERTPLGEGTSRGMPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRDVVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGHGGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQNVESLIAKRQQNEL
Homology
[Close]
BLAST of CmaCh03G000490 vs. Swiss-Prot
Match: MAM33_SCHPO (Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC776.07 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.7e-08
Identity = 37/111 (33.33%), Postives = 53/111 (47.75%), Query Frame = 1 

Query: 116 VSKPGVNSLLQFDCGVSEDGHGGSPFKIYNAYYLQSSACLGPSV----------YRGPLF 175
           +SKPG N  L F+    +DG     F I N Y+ +    L              Y GP F
Sbjct: 164 ISKPG-NGALVFEATALDDG-----FDIENIYFSKDIDMLTSDSLEAEWKRRKQYLGPSF 223

Query: 176 SSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQNVESLI 217
             LDPELQ     +L  R ++ESL+ F++     KE  +Y+NWL++V   +
Sbjct: 224 KELDPELQDLFHSYLEERKIDESLSSFIVSFGLTKELKEYINWLESVRQFL 268

[Close]
BLAST of CmaCh03G000490 vs. Swiss-Prot
Match: MAM33_YEAST (Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MAM33 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07
Identity = 25/55 (45.45%), Postives = 38/55 (69.09%), Query Frame = 1 

Query: 159 VYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQNVE 214
           VY GP FS+LD ELQ++L+ +L SRGV E L  F+  +   KE  +Y++WL+ ++
Sbjct: 208 VYHGPPFSNLDEELQESLEAYLESRGVNEELASFISAYSEFKENNEYISWLEKMK 262

[Close]
BLAST of CmaCh03G000490 vs. TrEMBL
Match: V4U5M6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005732mg PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.5e-66
Identity = 128/202 (63.37%), Postives = 161/202 (79.70%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MP+A+ I RK +KAL DL LLKIL SEI HELSS  FQ++ Q G+  DF VE+D+ +S+D
Sbjct: 43  MPKASPILRKGQKALQDLSLLKILNSEITHELSSNRFQDN-QSGTLGDFKVEYDAPQSQD 102

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK ESGEE+A+SAL GP  F RE  F RE+LMK+C++KPG+ S+LQFDC V+E   
Sbjct: 103 VVLRRKFESGEEVAVSALLGPETFVRESRFPREVLMKVCLTKPGLCSILQFDCRVTEKHI 162

Query: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196
            GS F I NAYYLQSS CLG  +YRGP+FSSLDP+LQ ALK +L++RG+ E LT++LL+H
Sbjct: 163 EGSDFDIRNAYYLQSSTCLGRPLYRGPMFSSLDPQLQVALKEYLVARGIGEHLTNYLLLH 222

Query: 197 LHKKEQGQYLNWLQNVESLIAK 219
           LHKKEQ QY+NWLQ +ES++AK
Sbjct: 223 LHKKEQDQYMNWLQKLESMVAK 243

[Close]
BLAST of CmaCh03G000490 vs. TrEMBL
Match: B9H9I1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s04490g PE=4 SV=2)

HSP 1 Score: 255.8 bits (652), Expect = 5.0e-65
Identity = 128/201 (63.68%), Postives = 159/201 (79.10%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MPR   I RK RKAL +L L+KILQSEI HELS+T FQ++ Q G+  DF V+ DSL+S+D
Sbjct: 1   MPRVTPILRKGRKALENLGLVKILQSEIKHELSTTPFQDN-QSGNLGDFKVDWDSLESQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK ESGEE+A+SAL G  +F   G F RE+LMK+CV KPG+NS+LQFDCGVSE G 
Sbjct: 61  VVLRRKCESGEEVAVSALLGQEMFAEGGIFPREVLMKVCVKKPGLNSVLQFDCGVSEKGI 120

Query: 137 GGSPFKIYNAYYLQ-SSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLI 196
           GGS F IY+A+YL  ++ C  PS YRGP FS LD +LQ ALKG+LI++G+ E+LT+FLL+
Sbjct: 121 GGSQFHIYSAHYLHLTTTCPKPSAYRGPSFSDLDSDLQDALKGYLIAKGIGENLTNFLLL 180

Query: 197 HLHKKEQGQYLNWLQNVESLI 217
           HLHKKE GQY+NWLQ +ESL+
Sbjct: 181 HLHKKELGQYVNWLQKLESLV 200

[Close]
BLAST of CmaCh03G000490 vs. TrEMBL
Match: A0A067DGZ8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028851mg PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.3e-64
Identity = 126/202 (62.38%), Postives = 159/202 (78.71%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MP+A+ I RK +KAL DL+LLKIL SEI HELSS  FQ++ Q G+  DF VE+D+ +S D
Sbjct: 1   MPKASPILRKGQKALQDLNLLKILNSEITHELSSNRFQDN-QSGTLGDFKVEYDAPQSHD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLR K ESGEE+A+SAL GP  F RE  F RE+LMK+C++KP + S+LQFDC V+E   
Sbjct: 61  VVLRTKFESGEEVAVSALLGPETFVRESRFPREVLMKVCLTKPVLCSILQFDCRVTEKHI 120

Query: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196
            GS F I NAYYLQSS CLG  +YRGP+FSSLDP+LQ ALK +L++RG+ E LT++LL+H
Sbjct: 121 EGSDFDIRNAYYLQSSTCLGRPLYRGPMFSSLDPQLQVALKEYLVARGIGEHLTNYLLLH 180

Query: 197 LHKKEQGQYLNWLQNVESLIAK 219
           LHKKEQ QY+NWLQ +ES++AK
Sbjct: 181 LHKKEQDQYVNWLQKLESMVAK 201

[Close]
BLAST of CmaCh03G000490 vs. TrEMBL
Match: A0A0B0MQI4_GOSAR (Mitochondrial acidic MAM33 OS=Gossypium arboreum GN=F383_23138 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 9.5e-64
Identity = 124/205 (60.49%), Postives = 163/205 (79.51%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MPRA QI RK+RK + DL+LLK+LQSEI+HELSS SFQ+ +  GS  DF ++ +S +S+D
Sbjct: 1   MPRATQILRKSRKVVEDLNLLKVLQSEISHELSSNSFQD-DNNGSLGDFVLDWNSSQSQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK ESGEE+A+SAL     +  EG F R++LMK+CV +PG++S+LQFDCGVSE G 
Sbjct: 61  VVLRRKSESGEEVAVSALLSQKTYDTEGIFPRKLLMKVCVKRPGLSSILQFDCGVSEKGV 120

Query: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196
             S FKI +AY+LQS+   G S+YRGPLFSSL+P+LQ ALK +L++RG+ E LT+FLL+ 
Sbjct: 121 RRSDFKIRSAYFLQSTTVPGSSIYRGPLFSSLEPQLQDALKEYLVARGIREDLTNFLLLT 180

Query: 197 LHKKEQGQYLNWLQNVESLIAKRQQ 222
           LHKKEQGQYL+WLQ +ES +AK ++
Sbjct: 181 LHKKEQGQYLDWLQKLESFVAKDER 204

[Close]
BLAST of CmaCh03G000490 vs. TrEMBL
Match: A0A0D2RJB2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G087400 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.0e-62
Identity = 124/205 (60.49%), Postives = 161/205 (78.54%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MPRA QI RK+RK + DL+LLK+LQSEI+HELSS SFQ+ E  GS  DF ++ +S +S+D
Sbjct: 1   MPRATQILRKSRKVVEDLNLLKVLQSEISHELSSNSFQD-ENIGSLGDFVLDWNSSRSQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK ESGEE+A+SAL        EG F R++LMK+CV +PG++S+LQFDCGVSE G 
Sbjct: 61  VVLRRKSESGEEVAVSALLSQKTCDTEGIFPRKLLMKVCVKRPGLSSILQFDCGVSEKGV 120

Query: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196
             S FKI +AY+LQS+   G S+YRGPLFSSL+P+LQ ALK +L++RG+ E LT+FLL+ 
Sbjct: 121 RRSDFKIRSAYFLQSTTVPGSSIYRGPLFSSLEPQLQDALKEYLVARGIREDLTNFLLLT 180

Query: 197 LHKKEQGQYLNWLQNVESLIAKRQQ 222
           LHKKEQGQYL+WLQ +ES + K ++
Sbjct: 181 LHKKEQGQYLDWLQKLESFVMKDER 204

[Close]
BLAST of CmaCh03G000490 vs. TAIR10
Match: AT2G41600.5 (AT2G41600.5 Mitochondrial glycoprotein family protein)

HSP 1 Score: 180.3 bits (456), Expect = 1.4e-45
Identity = 95/203 (46.80%), Postives = 134/203 (66.01%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           M + N + ++  KA+ + DLLKILQSEI HE+S   FQ  E  GS  DF ++ DS +S+D
Sbjct: 1   MRKLNPLLKRGLKAIENGDLLKILQSEIRHEISHPRFQGVET-GSLGDFKLDWDSPESQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREG--AFSREILMKICVSKPGVNSLLQFDCGVSED 136
           +VL+R+ +SGE++ +SAL  P     E    F RE   K+C+ KPG++S+LQF C V E 
Sbjct: 61  IVLKRQFDSGEKVVVSALLQPEPIELEDDLVFPREAHAKVCIKKPGLSSILQFHCRVYES 120

Query: 137 GHGGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLL 196
           G G S F I +AY+++S      S Y    FS +DP+L  AL+ +LIS+GV E LT+FLL
Sbjct: 121 GSGSSHFDIESAYFIRSFVSAPSSTYGDHFFSQVDPKLHSALEQYLISKGVSEGLTNFLL 180

Query: 197 IHLHKKEQGQYLNWLQNVESLIA 218
            HL+KKEQ QY+NWL+ +ES ++
Sbjct: 181 CHLNKKEQDQYVNWLRRLESTMS 202

[Close]
BLAST of CmaCh03G000490 vs. TAIR10
Match: AT1G15870.1 (AT1G15870.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 61.2 bits (147), Expect = 9.2e-10
Identity = 51/214 (23.83%), Postives = 99/214 (46.26%), Query Frame = 1 

Query: 13  TSRGMPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSL 72
           +SR    +     + R+   + ++L++++ EI  EL  +     E+  S   F V+ +  
Sbjct: 39  SSRKFLSSGSYVSEMRRTAFEGNILRLIRLEIQSELDHSPILQPEE--SFGPFTVD-ERP 98

Query: 73  KSRDVVLRRKLESGEEIAISA--LSGPLIFGREGAFSRE-----ILMKICVSKPGVNSLL 132
             + + LRRK    E+I I A    G +   +      E     I   + +SK G    L
Sbjct: 99  GEQWISLRRKFGEKEDIKIEATMFDGSVPSSKSTTSDPEDVQLHITFIVNISK-GDGETL 158

Query: 133 QFDCGVSEDGHGGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGV 192
           +  C    D    + F      +++ S+   P+ Y GP F  ++ ELQ ++  FL  RG+
Sbjct: 159 EIMCSAWPDTIQITKF------FVRKSSQNSPNAYIGPEFQEMEDELQDSVYRFLEERGI 218

Query: 193 EESLTDFLLIHLHKKEQGQYLNWLQNVESLIAKR 220
            + L +FL  ++  K++ +Y+ W++ V+S + ++
Sbjct: 219 SDDLAEFLHQYMKNKDKAEYIRWMETVKSYVEQK 242

[Close]
BLAST of CmaCh03G000490 vs. TAIR10
Match: AT4G32605.1 (AT4G32605.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-09
Identity = 50/192 (26.04%), Postives = 79/192 (41.15%), Query Frame = 1 

Query: 39  ILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRDVVLRRKLESGEEIAISALSGPL 98
           +L+S   H L  +      +    S F +   SL+     + +K    EEI +  +   L
Sbjct: 40  LLRSLKEHYLEVSKMTPPPKVSPPSPFEIVKGSLEGSTGAVLKKSVGNEEINLFVMR--L 99

Query: 99  IFG---REGAFSREILMKICVSKPGVNSLLQFDCGVSEDGHGGSPFKIYNAYYLQSSACL 158
             G    +     ++ + + VSKP     L F CG+  D  G     I++         L
Sbjct: 100 AHGGDEEDDGGINQLFLHVAVSKPNQPDSLHFLCGLYPDALG-----IHSVSMRPKLEAL 159

Query: 159 ----GPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQN 218
                P+ Y GP F  LD +++    GFL  RGV ESL  FL   L+ K+    L W ++
Sbjct: 160 EMSDDPTQYTGPSFEELDEKMRDVFHGFLEERGVNESLFPFLQAWLYVKDHRNLLRWFKS 219

Query: 219 VESLIAKRQQNE 224
           V + + +    E
Sbjct: 220 VGTFVHENPSAE 224

[Close]
BLAST of CmaCh03G000490 vs. TAIR10
Match: AT1G80720.1 (AT1G80720.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-09
Identity = 51/202 (25.25%), Postives = 90/202 (44.55%), Query Frame = 1 

Query: 28  RKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRDVVLRRKLESGE 87
           +K+    ++L+++++EI +EL  +     +   S   F V+ +    + + L+R     E
Sbjct: 2   QKSAFQGNILRLIRNEIEYELDHSP--PLQPPNSFGPFTVD-ERPGEQWISLKRNFGDKE 61

Query: 88  EIAISALSGPLIFGR----------EGAFSREILMKICVSKPGVNSLLQFDCGVSEDGHG 147
           +I I A     +F R          E  +   I   + +SK G    L+  C    D   
Sbjct: 62  DIKIEAT----MFDRSVPTSKSTKTEPEYILHITFIVNISKAGATEALEIMCSAWPDTIE 121

Query: 148 GSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIHL 207
            S   I      +      PS Y GP F  LD +LQ AL  FL  RG+ + L  FL  ++
Sbjct: 122 ISKLCI------RRGINTSPSSYGGPEFEELDDQLQDALYQFLEERGISDELAVFLHRYM 181

Query: 208 HKKEQGQYLNWLQNVESLIAKR 220
             K + +Y+ W+++V+S + ++
Sbjct: 182 KNKGKAEYVRWMESVKSYVEQK 190

[Close]
BLAST of CmaCh03G000490 vs. TAIR10
Match: AT5G02050.1 (AT5G02050.1 Mitochondrial glycoprotein family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-07
Identity = 24/59 (40.68%), Postives = 36/59 (61.02%), Query Frame = 1 

Query: 160 YRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIHLHKKEQGQYLNWLQNVESLIAK 219
           Y GP F  LD  LQKA   +L  RG++ S T FL  ++  K+  +YL WL++++S + K
Sbjct: 209 YEGPDFDDLDENLQKAFHRYLEIRGIKPSFTTFLADYVANKDSREYLQWLKDLKSFVEK 267

[Close]
BLAST of CmaCh03G000490 vs. NCBI nr
Match: gi|449444362|ref|XP_004139944.1| (PREDICTED: mitochondrial acidic protein mam33 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 2.1e-88
Identity = 169/208 (81.25%), Postives = 182/208 (87.50%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           M RA QIFRKARKA HDL+LLKILQSEI HELSST  QN+E   +SSDF VEHDSLKS+D
Sbjct: 1   MARATQIFRKARKAFHDLNLLKILQSEITHELSSTPCQNYENNSTSSDFTVEHDSLKSQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRKL+SGEE+ ISAL GPL  G EGAF R+ILMKICVSKPGV+SLLQFDCGVSE+GH
Sbjct: 61  VVLRRKLDSGEEVVISALLGPLRLGYEGAFPRDILMKICVSKPGVSSLLQFDCGVSENGH 120

Query: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196
           GGSPF++YNAYYL SS CLGPSVYRGP FSSLDP LQ ALK FLISRGVEE LT+FLLIH
Sbjct: 121 GGSPFELYNAYYLPSSDCLGPSVYRGPSFSSLDPRLQDALKEFLISRGVEERLTNFLLIH 180

Query: 197 LHKKEQGQYLNWLQNVESLIAKRQQNEL 225
           LHKKEQGQYLNWLQ+VES IAK Q NEL
Sbjct: 181 LHKKEQGQYLNWLQDVESSIAKGQSNEL 208

[Close]
BLAST of CmaCh03G000490 vs. NCBI nr
Match: gi|659094885|ref|XP_008448290.1| (PREDICTED: uncharacterized protein LOC103490527 isoform X1 [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 1.8e-79
Identity = 154/194 (79.38%), Postives = 168/194 (86.60%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           M R  Q+FRKARK   DL LL+ILQSEI HELSST  QN+E   SSS F VEHDSLKS+D
Sbjct: 1   MVRTTQLFRKARKTFQDLRLLQILQSEIAHELSSTPCQNYENNASSSHFTVEHDSLKSQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK++SGEE+ ISAL GPL FG +GAF REILMKICVSKPGV+SLLQFDCGVSEDGH
Sbjct: 61  VVLRRKMDSGEEVVISALLGPLRFGYDGAFPREILMKICVSKPGVSSLLQFDCGVSEDGH 120

Query: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196
           GGSPFK+YNAYYL+SS CLGP VYRGP FSSLDP LQ ALK +LISRGVEESLT+FLLIH
Sbjct: 121 GGSPFKLYNAYYLRSSDCLGP-VYRGPSFSSLDPRLQDALKEYLISRGVEESLTNFLLIH 180

Query: 197 LHKKEQGQYLNWLQ 211
           LHKKEQGQYLNWL+
Sbjct: 181 LHKKEQGQYLNWLK 193

[Close]
BLAST of CmaCh03G000490 vs. NCBI nr
Match: gi|567857210|ref|XP_006421288.1| (hypothetical protein CICLE_v10005732mg [Citrus clementina])

HSP 1 Score: 259.2 bits (661), Expect = 6.5e-66
Identity = 128/202 (63.37%), Postives = 161/202 (79.70%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MP+A+ I RK +KAL DL LLKIL SEI HELSS  FQ++ Q G+  DF VE+D+ +S+D
Sbjct: 43  MPKASPILRKGQKALQDLSLLKILNSEITHELSSNRFQDN-QSGTLGDFKVEYDAPQSQD 102

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK ESGEE+A+SAL GP  F RE  F RE+LMK+C++KPG+ S+LQFDC V+E   
Sbjct: 103 VVLRRKFESGEEVAVSALLGPETFVRESRFPREVLMKVCLTKPGLCSILQFDCRVTEKHI 162

Query: 137 GGSPFKIYNAYYLQSSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLIH 196
            GS F I NAYYLQSS CLG  +YRGP+FSSLDP+LQ ALK +L++RG+ E LT++LL+H
Sbjct: 163 EGSDFDIRNAYYLQSSTCLGRPLYRGPMFSSLDPQLQVALKEYLVARGIGEHLTNYLLLH 222

Query: 197 LHKKEQGQYLNWLQNVESLIAK 219
           LHKKEQ QY+NWLQ +ES++AK
Sbjct: 223 LHKKEQDQYMNWLQKLESMVAK 243

[Close]
BLAST of CmaCh03G000490 vs. NCBI nr
Match: gi|743844922|ref|XP_011027335.1| (PREDICTED: uncharacterized protein LOC105127656 isoform X2 [Populus euphratica])

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-65
Identity = 130/201 (64.68%), Postives = 158/201 (78.61%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MPR   I RK RKAL +L L+KILQSEI HELS+T FQ + Q GS  DF V+ DSL+S+D
Sbjct: 1   MPRVTPILRKGRKALENLGLVKILQSEIKHELSTTPFQGN-QSGSLGDFKVDWDSLESQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK ESG+EIA+SAL G  +F   G F RE+LMK+CV KPG+NS+LQFDCGVSE G 
Sbjct: 61  VVLRRKCESGDEIAVSALLGQEMFAEGGIFPREVLMKVCVKKPGLNSVLQFDCGVSEKGR 120

Query: 137 GGSPFKIYNAYYLQS-SACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLI 196
           GGS F IY+A+YL S + C  PS YRGP FS LD +LQ ALKG+LI++G+ E+LT+FLL+
Sbjct: 121 GGSQFHIYSAHYLHSTTTCPKPSAYRGPSFSDLDTDLQDALKGYLIAKGIGENLTNFLLL 180

Query: 197 HLHKKEQGQYLNWLQNVESLI 217
           HLHKKE GQY+NWLQ +ESL+
Sbjct: 181 HLHKKELGQYVNWLQKLESLV 200

[Close]
BLAST of CmaCh03G000490 vs. NCBI nr
Match: gi|566174446|ref|XP_002308010.2| (hypothetical protein POPTR_0006s04490g [Populus trichocarpa])

HSP 1 Score: 255.8 bits (652), Expect = 7.2e-65
Identity = 128/201 (63.68%), Postives = 159/201 (79.10%), Query Frame = 1 

Query: 17  MPRANQIFRKARKALHDLDLLKILQSEINHELSSTSFQNHEQKGSSSDFAVEHDSLKSRD 76
           MPR   I RK RKAL +L L+KILQSEI HELS+T FQ++ Q G+  DF V+ DSL+S+D
Sbjct: 1   MPRVTPILRKGRKALENLGLVKILQSEIKHELSTTPFQDN-QSGNLGDFKVDWDSLESQD 60

Query: 77  VVLRRKLESGEEIAISALSGPLIFGREGAFSREILMKICVSKPGVNSLLQFDCGVSEDGH 136
           VVLRRK ESGEE+A+SAL G  +F   G F RE+LMK+CV KPG+NS+LQFDCGVSE G 
Sbjct: 61  VVLRRKCESGEEVAVSALLGQEMFAEGGIFPREVLMKVCVKKPGLNSVLQFDCGVSEKGI 120

Query: 137 GGSPFKIYNAYYLQ-SSACLGPSVYRGPLFSSLDPELQKALKGFLISRGVEESLTDFLLI 196
           GGS F IY+A+YL  ++ C  PS YRGP FS LD +LQ ALKG+LI++G+ E+LT+FLL+
Sbjct: 121 GGSQFHIYSAHYLHLTTTCPKPSAYRGPSFSDLDSDLQDALKGYLIAKGIGENLTNFLLL 180

Query: 197 HLHKKEQGQYLNWLQNVESLI 217
           HLHKKE GQY+NWLQ +ESL+
Sbjct: 181 HLHKKELGQYVNWLQKLESLV 200

The following BLAST results are available for this feature:
BLAST of CmaCh03G000490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MAM33_SCHPO4.7e-0833.33Mitochondrial acidic protein mam33 OS=Schizosaccharomyces pombe (strain 972 / AT... [more]
MAM33_YEAST1.8e-0745.45Mitochondrial acidic protein MAM33 OS=Saccharomyces cerevisiae (strain ATCC 2045... [more]
BLAST of CmaCh03G000490 vs. TrEMBL
Match NameE-valueIdentityDescription
V4U5M6_9ROSI4.5e-6663.37Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005732mg PE=4 SV=1[more]
B9H9I1_POPTR5.0e-6563.68Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s04490g PE=4 SV=2[more]
A0A067DGZ8_CITSI3.3e-6462.38Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028851mg PE=4 SV=1[more]
A0A0B0MQI4_GOSAR9.5e-6460.49Mitochondrial acidic MAM33 OS=Gossypium arboreum GN=F383_23138 PE=4 SV=1[more]
A0A0D2RJB2_GOSRA1.0e-6260.49Uncharacterized protein OS=Gossypium raimondii GN=B456_003G087400 PE=4 SV=1[more]
BLAST of CmaCh03G000490 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G41600.51.4e-4546.80 Mitochondrial glycoprotein family protein[more]
AT1G15870.19.2e-1023.83 Mitochondrial glycoprotein family protein[more]
AT4G32605.14.6e-0926.04 Mitochondrial glycoprotein family protein[more]
AT1G80720.16.0e-0925.25 Mitochondrial glycoprotein family protein[more]
AT5G02050.11.9e-0740.68 Mitochondrial glycoprotein family protein[more]
BLAST of CmaCh03G000490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444362|ref|XP_004139944.1|2.1e-8881.25PREDICTED: mitochondrial acidic protein mam33 [Cucumis sativus][more]
gi|659094885|ref|XP_008448290.1|1.8e-7979.38PREDICTED: uncharacterized protein LOC103490527 isoform X1 [Cucumis melo][more]
gi|567857210|ref|XP_006421288.1|6.5e-6663.37hypothetical protein CICLE_v10005732mg [Citrus clementina][more]
gi|743844922|ref|XP_011027335.1|1.5e-6564.68PREDICTED: uncharacterized protein LOC105127656 isoform X2 [Populus euphratica][more]
gi|566174446|ref|XP_002308010.2|7.2e-6563.68hypothetical protein POPTR_0006s04490g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003428MAM33
Vocabulary: Cellular Component
TermDefinition
GO:0005759mitochondrial matrix
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005759 mitochondrial matrix
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G000490.1CmaCh03G000490.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003428Mitochondrial glycoproteinGENE3DG3DSA:3.10.280.10coord: 34..217
score: 5.0
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 111..214
score: 9.3
IPR003428Mitochondrial glycoproteinunknownSSF54529Mitochondrial glycoprotein MAM33-likecoord: 33..216
score: 4.58
NoneNo IPR availablePANTHERPTHR10826COMPLEMENT COMPONENT 1coord: 15..218
score: 1.6
NoneNo IPR availablePANTHERPTHR10826:SF7GLYCOPROTEIN FAMILY PROTEINcoord: 15..218
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh03G000490Cla006846Watermelon (97103) v1cmawmB635
CmaCh03G000490ClCG04G003650Watermelon (Charleston Gray)cmawcgB592
CmaCh03G000490CmoCh03G000460Cucurbita moschata (Rifu)cmacmoB654
CmaCh03G000490Lsi01G018340Bottle gourd (USVL1VR-Ls)cmalsiB598
CmaCh03G000490Cp4.1LG10g11430Cucurbita pepo (Zucchini)cmacpeB656
CmaCh03G000490Cla97C04G070650Watermelon (97103) v2cmawmbB691
CmaCh03G000490Carg24990Silver-seed gourdcarcmaB0735
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh03G000490Silver-seed gourdcarcmaB0661
CmaCh03G000490Wax gourdcmawgoB0802
CmaCh03G000490Cucurbita maxima (Rimu)cmacmaB530
CmaCh03G000490Cucurbita moschata (Rifu)cmacmoB674
CmaCh03G000490Cucurbita pepo (Zucchini)cmacpeB669