CmaCh03G000190 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh03G000190
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTransmembrane protein, putative
LocationCma_Chr03 : 213589 .. 216636 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTAACTCGCAACCCAAATTTTCGTCCCAATTTAGAAGTTATATGTGTGGCCTTCATTAAATGTAACTCTGCATATAATACATTTTCAATTTTAAAATTATAATTTGCCATGTTTGAATTTCCTATTTCATATATCTTCCTTTATTACATTGTGAAGAACCTAAAGAATAATTTAATTAAATTTACAACGTAAATAGATGAAAATATGCATTTCCACTTTATTAAAAAATGAAGAGCATGATTTTATTTGTGTTGAAATCTCTGCTAAAGCAGGAAATCAAATCGTTTGTACTAAATTTCTTCGAATATAATTAAAACAGTATTGAACATATGGCTTCTAGGAAATATATGTGTAACAATCATCGGTCTCCACATAAAATCAACTAATCAGACGATCTACAGATCTTCACATTCACCCTTTCAGCATTACGGAGGTCCACATGGGAAAGAAAGAATCACCGTCTGAAGAGACAATTGAAGAGACCATCTCCTATATCAATAAGAAAAAAATTAATTCCATCAATTTGGTTCTATTCTATCAATTTCGGTCATAAAATTAAATATAAAAATTATCTATATAAATTTTTGCAAATAGATTAGCACGAGATTAGACCTCGAATTATTAAAGTTTGTAAAAATTAGCTAAAAATGAGATAAGAAGACACATAAATAAAAATAAATAAATAAATAAATCTAGAGAAGAATCTCCCAGTCCTAATCTTTATTGAGACTCTATATTAAAAAGTATTTGAGGTGAGTATGTCTACTATTTGATAATTAAGTTATTTTTTAGCCAAAAATGGATTTAGTTAATATGGTTAAAAGAGTTGGATCATATATTATGTATTACCTCAATGTCGAAAACTCACCTAGGTTGAATTGGACTTAGAGAAGCAGATCTAACCTAGTTCCGAGGATAATTTGTAACTCGACATTGGACAACCAACTAAGTGGTTTCACTACTAGCTTGATTGAATGAATGGTTTGATGCATGGACAACATGTGTGTTGTTGCCCTGCACGTGTCGTGCCATGGGGGGACCTATCCTTTTAACATATCACAGCATGGCCTTAGACAGTTTTTTGGTCCGGGCAAGATTGGATATGTTATGCTTCTCTACGCATGACCCATGTATGTGAGCTTGAACATCACAGTATGCAACATAGCTTATCATTGCATAATAAATCGGTGAATTACGCTTTAAGACAAACCTCCATTTATCTATAACATAAAAAATCGGTGAATTACGCTTCCACATTTCCTGTACATTCAATAGTATGTAACACAGCTTTCGGTCTATGGAGGTTTATACATCATAGGTTTTCGATTCCATATAACCCTTATACAACACTACATGATCACAAAATAGAATAGCTTATCATAGCATAACGTCGCATAACATGGCATAACTTATTAAATTGCACGCGTCATCATACATACTACAATTCATCAAACCGAGTCAATAGTAGAACCAATTACTTAGCTGGTCTAGGTTGCAGTTACTTATTATTCTTGGTACTAGCTTGAATCTACTCCTCAACGATCAATTCAACTTTAAATCTATTATCTTTGTTTATAAACCATACTTCTTTGAGATGCTACTTAAAATGAGGTACTAACATGTATGAGATTGAGATGCCAGAAGAGGATCTCAAGAAGTTCCAAGACTCTAGCATAAACCGTTTTCTAGATCTTTTGAAATGAACATCCTTAGCATTCAAGGGCATGTTGTGGAATTGACCTGCACACTCACGAGGTGTCCAATTATACAAGGTGCTCGATATGAAAAGTACCTAACCGCCATTAATTTCTTCTGTGAATTTTTATGCTTTGCTAAATTTTCGTGCATCAAATGAACGATTTGAACGCACAACCCATGCAAGAGCAAATCGATCTCCAAGCATTCGTGATGTTTTCATGAACTTAAACGATATATCTTCAATAAATTTGGAGAAAAGCCTTAGCCCATAAAGTTCCATCTCGAATACCTCTCACAGCCATAAACCCTGAATTCAAAGGTTGTGTTTGTTTTACCCTAATTCCATAACCAAAATGATACGATACCAATTGTTGGAGTAGAAACAGAAATCTACGTAATGCTGCCAACCACCTCTGTCAACATATTCATATGATCATTAGGAGTTCCAATTTTAAATAAACGATTGTCCCTTCATTAACAATTTCTCGAACAAAATGAAATCAGAAATGAATATACTTGGTTCAAGCATGATGCACTTGGTTCTTGGACAAACAAACATAACTGGCTATCAAAAAACCATGGAAAACACAATTTAAAAACTAGTAACAAAAATGTCAATTGTGGACCTTAAAACTTATTACCAAACAAATCTCAAACGGTTTATTGTTTTTTTTTTTTTTTTACAATAGAAATGTTAATTTTAGGGTTTATAGCAAACATGACCTTAATTTTAATTGAGAAGCAAATTCTATATAAAAAGGAAGAAAGAGAAGTTTAGAGAACGTATAGAAAATATGATGTCAAATAAATCTAATGTGTTTTTTAGAGTTTGTACTCTCATTTTCTTTGGATTGCACTTTATAGTCTACGAAACCGATGCTAAAAAAGTGGTTGAAGTCGATGTAGACGACACCATTCGAGAAGAGGAATTCACGGACCAAATTGTAAAGCATCCAAAAGGAATATCCATTTCTTCATCTAGATCAAGCCAAAGAACATTATTTCACTTGACCCCTTCTCCACCCCTCGTCCTTAGAATGTTACCGAAAGGCGTACCCATTTCTCCGTCTGGGCCGAGTAAAAGGCATAATAACTACCCACTTCCTCCACCACATGCTTCATCAGTCATTTTAAATAAACAATTTAAGATGAATTTTGGAATGTTTCCGAAAGGCGTACCCATTCCTTTGTTTGGGTCAAGTAGAAGGCATAATGACTACCCACCGCATGCTTCATCTGTCATTTTAAAAGGTGTACCCATTCCTCCGCCTGGGCCGAGTCAAAGGACGTCAGACTATCCTCCTCCTGCACCACATACTCCTTCCATCACTAGGGATATAATCTAA

mRNA sequence

ATGACTAACTCGCAACCCAAATTTTCGTCCCAATTTAGAAGTTATATAGTTTGTACTCTCATTTTCTTTGGATTGCACTTTATAGTCTACGAAACCGATGCTAAAAAAGTGGTTGAAGTCGATGTAGACGACACCATTCGAGAAGAGGAATTCACGGACCAAATTGTAAAGCATCCAAAAGGAATATCCATTTCTTCATCTAGATCAAGCCAAAGAACATTATTTCACTTGACCCCTTCTCCACCCCTCGTCCTTAGAATGTTACCGAAAGGCGTACCCATTTCTCCGTCTGGGCCGAGTAAAAGGCATAATAACTACCCACTTCCTCCACCACATGCTTCATCAGTCATTTTAAATAAACAATTTAAGATGAATTTTGGAATGTTTCCGAAAGGCGTACCCATTCCTTTGTTTGGGTCAAGTAGAAGGCATAATGACTACCCACCGCATGCTTCATCTGTCATTTTAAAAGGTGTACCCATTCCTCCGCCTGGGCCGAGTCAAAGGACGTCAGACTATCCTCCTCCTGCACCACATACTCCTTCCATCACTAGGGATATAATCTAA

Coding sequence (CDS)

ATGACTAACTCGCAACCCAAATTTTCGTCCCAATTTAGAAGTTATATAGTTTGTACTCTCATTTTCTTTGGATTGCACTTTATAGTCTACGAAACCGATGCTAAAAAAGTGGTTGAAGTCGATGTAGACGACACCATTCGAGAAGAGGAATTCACGGACCAAATTGTAAAGCATCCAAAAGGAATATCCATTTCTTCATCTAGATCAAGCCAAAGAACATTATTTCACTTGACCCCTTCTCCACCCCTCGTCCTTAGAATGTTACCGAAAGGCGTACCCATTTCTCCGTCTGGGCCGAGTAAAAGGCATAATAACTACCCACTTCCTCCACCACATGCTTCATCAGTCATTTTAAATAAACAATTTAAGATGAATTTTGGAATGTTTCCGAAAGGCGTACCCATTCCTTTGTTTGGGTCAAGTAGAAGGCATAATGACTACCCACCGCATGCTTCATCTGTCATTTTAAAAGGTGTACCCATTCCTCCGCCTGGGCCGAGTCAAAGGACGTCAGACTATCCTCCTCCTGCACCACATACTCCTTCCATCACTAGGGATATAATCTAA

Protein sequence

MTNSQPKFSSQFRSYIVCTLIFFGLHFIVYETDAKKVVEVDVDDTIREEEFTDQIVKHPKGISISSSRSSQRTLFHLTPSPPLVLRMLPKGVPISPSGPSKRHNNYPLPPPHASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHASSVILKGVPIPPPGPSQRTSDYPPPAPHTPSITRDII
Homology
[Close]
BLAST of CmaCh03G000190 vs. TrEMBL
Match: U5G6A5_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0006s09760g PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.1e-15
Identity = 62/140 (44.29%), Postives = 75/140 (53.57%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPPLVLR-----MLPKGVPISPSGPSKRHNNYPLPPPHA 118
           PK   I +S  S+ +     P P L+L+      LPK  PI PSGPS+R ++YP PPP  
Sbjct: 8   PKHTPIPTSGPSRGSSDFPPPPPRLLLKGWNFGQLPKYTPIPPSGPSRRSSDYPPPPPPT 67

Query: 119 SSVILNKQFK-MNFGMFPKGVPIPLFGSSRRHNDYPPHASSV----------ILKGVPIP 178
           SS      FK  +FG  PK  PIP  G SRR +DYPP               + K  PIP
Sbjct: 68  SS------FKGWSFGQLPKYTPIPPSGPSRRSSDYPPPPPPTSSFKGWSFGQLPKYTPIP 127

Query: 179 PPGPSQRTSDYPPPAPHTPS 183
           P GPS+R+SDYPPP P T S
Sbjct: 128 PSGPSRRSSDYPPPPPPTSS 141

[Close]
BLAST of CmaCh03G000190 vs. TrEMBL
Match: B9RB38_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1510820 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-14
Identity = 59/133 (44.36%), Postives = 71/133 (53.38%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPPLV------LRMLPKGVPISPSGPSKRHNNYPLPPPH 118
           PKG+ I  S  S+R+     P PPLV        MLPKGVPI PSGPS+R      PPP 
Sbjct: 52  PKGVPIPPSGPSRRSSIPSPPPPPLVKPSNLNFGMLPKGVPIPPSGPSRRS-----PPPF 111

Query: 119 ASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHASS---------VILKGVPIPP 177
           +          ++FGM PKGVPIP  G SRR    P    +         ++ KGVPIPP
Sbjct: 112 SKG--------LSFGMLPKGVPIPPSGPSRRSPPPPALTGNPFNKNLNFGMLPKGVPIPP 171

[Close]
BLAST of CmaCh03G000190 vs. TrEMBL
Match: A0A067L3N0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04037 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-12
Identity = 64/147 (43.54%), Postives = 73/147 (49.66%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPP----LVLRMLPKGVPISPSGPSKR------------ 118
           PKGI I  S  S+R     +PSPP    L  RMLPKGVPI PSGPS+R            
Sbjct: 33  PKGIPIPPSGPSRRH-HEDSPSPPPPRHLNFRMLPKGVPIPPSGPSRRIPIPPFGPSKCH 92

Query: 119 HNNYPLPPP------HASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHAS---- 177
           H   P+PP       H  S        +NF M PKGVPIP  G SRRH++  P  S    
Sbjct: 93  HEGVPIPPSGPSRCCHEDSPSPPPPRHLNFRMLPKGVPIPPSGPSRRHHENSPSPSPPRR 152

[Close]
BLAST of CmaCh03G000190 vs. TrEMBL
Match: A0A061FHV4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_035454 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-11
Identity = 49/97 (50.52%), Postives = 55/97 (56.70%), Query Frame = 1 

Query: 87  MLPKGVPISPSGPSKRHNNYPLPPPHASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHND 146
           + PKGVPI PSGPS+R +  P PPP            +NFGMFPKGVPIP  G SRR + 
Sbjct: 38  VFPKGVPIPPSGPSRRTSASPPPPPPIRL--------LNFGMFPKGVPIPPSGPSRRTSA 97

Query: 147 YPPHASSVILK-------GVPIPPPGPSQRTSDYPPP 177
            PP      L        GVPIPP GPS+ TS  PPP
Sbjct: 98  SPPPPPPTGLLNFGTFPKGVPIPPSGPSRGTSASPPP 126

[Close]
BLAST of CmaCh03G000190 vs. TrEMBL
Match: M5W623_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014793mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.3e-09
Identity = 52/122 (42.62%), Postives = 58/122 (47.54%), Query Frame = 1 

Query: 60  KGISISSSRSSQRTLFHLTPSP-PLVLRMLPKGVPISPSGPSKRHNNYPLPPPHASSVIL 119
           +G  I  S  S+RT     P P P     LPK  PI PSGPS R ++ P PPP       
Sbjct: 47  RGTLIPPSWPSKRTSRPPPPPPHPSNFDTLPKYTPIPPSGPSGRTSDPPPPPP------- 106

Query: 120 NKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHAS----SVILKGVPIPPPGPSQRTSDYP 177
                 NFG  PK  PIP  G SRR +D PP         + K  PIPP G S RTS  P
Sbjct: 107 -----FNFGTLPKSTPIPPLGPSRRTSDPPPPPHPFNFGTLPKYTPIPPSGLSGRTSSPP 156

[Close]
BLAST of CmaCh03G000190 vs. NCBI nr
Match: gi|566175443|ref|XP_006381236.1| (hypothetical protein POPTR_0006s09760g, partial [Populus trichocarpa])

HSP 1 Score: 90.1 bits (222), Expect = 4.4e-15
Identity = 62/140 (44.29%), Postives = 75/140 (53.57%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPPLVLR-----MLPKGVPISPSGPSKRHNNYPLPPPHA 118
           PK   I +S  S+ +     P P L+L+      LPK  PI PSGPS+R ++YP PPP  
Sbjct: 8   PKHTPIPTSGPSRGSSDFPPPPPRLLLKGWNFGQLPKYTPIPPSGPSRRSSDYPPPPPPT 67

Query: 119 SSVILNKQFK-MNFGMFPKGVPIPLFGSSRRHNDYPPHASSV----------ILKGVPIP 178
           SS      FK  +FG  PK  PIP  G SRR +DYPP               + K  PIP
Sbjct: 68  SS------FKGWSFGQLPKYTPIPPSGPSRRSSDYPPPPPPTSSFKGWSFGQLPKYTPIP 127

Query: 179 PPGPSQRTSDYPPPAPHTPS 183
           P GPS+R+SDYPPP P T S
Sbjct: 128 PSGPSRRSSDYPPPPPPTSS 141

[Close]
BLAST of CmaCh03G000190 vs. NCBI nr
Match: gi|223550528|gb|EEF52015.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 87.0 bits (214), Expect = 3.7e-14
Identity = 59/133 (44.36%), Postives = 71/133 (53.38%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPPLV------LRMLPKGVPISPSGPSKRHNNYPLPPPH 118
           PKG+ I  S  S+R+     P PPLV        MLPKGVPI PSGPS+R      PPP 
Sbjct: 52  PKGVPIPPSGPSRRSSIPSPPPPPLVKPSNLNFGMLPKGVPIPPSGPSRRS-----PPPF 111

Query: 119 ASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHASS---------VILKGVPIPP 177
           +          ++FGM PKGVPIP  G SRR    P    +         ++ KGVPIPP
Sbjct: 112 SKG--------LSFGMLPKGVPIPPSGPSRRSPPPPALTGNPFNKNLNFGMLPKGVPIPP 171

[Close]
BLAST of CmaCh03G000190 vs. NCBI nr
Match: gi|731399706|ref|XP_010653709.1| (PREDICTED: proline-rich protein HaeIII subfamily 1-like [Vitis vinifera])

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-13
Identity = 63/137 (45.99%), Postives = 72/137 (52.55%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPP--------LVLRMLPKGVPISPSGPSKRHNNYPLPP 118
           PKG  I  S  S R     TP PP        L   MLPKGVPI PSGPS+R ++ P PP
Sbjct: 37  PKGDPIPPSGPSHRG--SETPPPPHSFARGPTLRFGMLPKGVPIPPSGPSQRTSDPPPPP 96

Query: 119 -PHASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHASS----------VILKGV 177
            P A + +        FGM PKG PIP  G S R ++ PP   S          ++ KG 
Sbjct: 97  QPFARASVFR------FGMLPKGDPIPPSGPSHRGSETPPPPHSFARGPTLRFGMLPKGD 156

[Close]
BLAST of CmaCh03G000190 vs. NCBI nr
Match: gi|643731396|gb|KDP38684.1| (hypothetical protein JCGZ_04037 [Jatropha curcas])

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12
Identity = 64/147 (43.54%), Postives = 73/147 (49.66%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPP----LVLRMLPKGVPISPSGPSKR------------ 118
           PKGI I  S  S+R     +PSPP    L  RMLPKGVPI PSGPS+R            
Sbjct: 33  PKGIPIPPSGPSRRH-HEDSPSPPPPRHLNFRMLPKGVPIPPSGPSRRIPIPPFGPSKCH 92

Query: 119 HNNYPLPPP------HASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHAS---- 177
           H   P+PP       H  S        +NF M PKGVPIP  G SRRH++  P  S    
Sbjct: 93  HEGVPIPPSGPSRCCHEDSPSPPPPRHLNFRMLPKGVPIPPSGPSRRHHENSPSPSPPRR 152

[Close]
BLAST of CmaCh03G000190 vs. NCBI nr
Match: gi|802592313|ref|XP_012071516.1| (PREDICTED: proline-rich protein 2-like [Jatropha curcas])

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-12
Identity = 64/147 (43.54%), Postives = 73/147 (49.66%), Query Frame = 1 

Query: 59  PKGISISSSRSSQRTLFHLTPSPP----LVLRMLPKGVPISPSGPSKR------------ 118
           PKGI I  S  S+R     +PSPP    L  RMLPKGVPI PSGPS+R            
Sbjct: 86  PKGIPIPPSGPSRRH-HEDSPSPPPPRHLNFRMLPKGVPIPPSGPSRRIPIPPFGPSKCH 145

Query: 119 HNNYPLPPP------HASSVILNKQFKMNFGMFPKGVPIPLFGSSRRHNDYPPHAS---- 177
           H   P+PP       H  S        +NF M PKGVPIP  G SRRH++  P  S    
Sbjct: 146 HEGVPIPPSGPSRCCHEDSPSPPPPRHLNFRMLPKGVPIPPSGPSRRHHENSPSPSPPRR 205

The following BLAST results are available for this feature:
BLAST of CmaCh03G000190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh03G000190 vs. TrEMBL
Match NameE-valueIdentityDescription
U5G6A5_POPTR3.1e-1544.29Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0006s09760g P... [more]
B9RB38_RICCO2.6e-1444.36Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1510820 PE=4 SV=1[more]
A0A067L3N0_JATCU1.9e-1243.54Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04037 PE=4 SV=1[more]
A0A061FHV4_THECC1.2e-1150.52Uncharacterized protein OS=Theobroma cacao GN=TCM_035454 PE=4 SV=1[more]
M5W623_PRUPE7.3e-0942.62Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014793mg PE=4 SV=1[more]
BLAST of CmaCh03G000190 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh03G000190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|566175443|ref|XP_006381236.1|4.4e-1544.29hypothetical protein POPTR_0006s09760g, partial [Populus trichocarpa][more]
gi|223550528|gb|EEF52015.1|3.7e-1444.36conserved hypothetical protein [Ricinus communis][more]
gi|731399706|ref|XP_010653709.1|1.4e-1345.99PREDICTED: proline-rich protein HaeIII subfamily 1-like [Vitis vinifera][more]
gi|643731396|gb|KDP38684.1|2.7e-1243.54hypothetical protein JCGZ_04037 [Jatropha curcas][more]
gi|802592313|ref|XP_012071516.1|2.7e-1243.54PREDICTED: proline-rich protein 2-like [Jatropha curcas][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G000190.1CmaCh03G000190.1mRNA