CmaCh02G018090 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G018090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	EID1-like F-box protein 3
Location	Cma_Chr02 : 10054414 .. 10055358 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGCCAACAGCAACAGGAGGGTCAGACCCTCTCCGTCGCCTCAGGGCTACGACTCCAACGACTCCGGCATCCTCAACGAGCGCATACTTCTCCTCGTATTTCAAACAATCAAGTGGGACTTACAGACGCTTTGCATCACCGCCTCCCTCAATTGTAAACTTCGAGCCATAGCCGACAGACTGCTCTGGCGCCAGCTCTGTCTCAATCGAGCTCCCCGAATGGTGGCCACATTGACCACCGGGGCTCCCAATGCCCGAGTCGGCGGTGGATGGAACGCGCTTGCCAAGCTAATGTTCTTCTGCTGCGGCTGCCAGTCCAGCCGCCATTTCAGGGTCGCCCAGCCCCTGCCCGGACATTTCGTCCACGAGTCTCGCTTCTCCAAAACCTCAGGCCGAAGCTTTCTCACCAAGAAATGTCGAGGAGACTTGCTGTACGTGAGCGATCCCTGTGAGCATTCCAACGGGAGCGACGAGGATGATTTGGGGATCTACAGAGGGGTATTTCGGGGATTTATGAGATCGAAGACTAGGGCATTCTTGATCAGACGGCAAGTGAGGTTGGAAGAGAGGACCAGATGCCCCTATTGTGGGGCTCGGGTGTGGAGTATGACATCCGCTCGACTCGTACCCAAGAGCGCGGCTAGGCGGCTTGGGACGCATGATGGAGGCCTGGAATATTTCGTGTGCGTTAACGGCCATTTGCATGGCTCTTGTTGGCTCGTTCCTCTATCATCGGAGGAAGACAGGGCCAACAACGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGCGGCGGAGTGTCACAGAGAAGTTCGTGAGATTGGGTTTGAAGACCGGACGGTGACAGATGAAAGCGCGAGCTCCACGGGGGAGGAGATTGTAGATAGTCGCGGAGAGGTCCGCGTCCACACCACAGATTAG

mRNA sequence

ATGAACGCCAACAGCAACAGGAGGGTCAGACCCTCTCCGTCGCCTCAGGGCTACGACTCCAACGACTCCGGCATCCTCAACGAGCGCATACTTCTCCTCGTATTTCAAACAATCAAGTGGGACTTACAGACGCTTTGCATCACCGCCTCCCTCAATTGTAAACTTCGAGCCATAGCCGACAGACTGCTCTGGCGCCAGCTCTGTCTCAATCGAGCTCCCCGAATGGTGGCCACATTGACCACCGGGGCTCCCAATGCCCGAGTCGGCGGTGGATGGAACGCGCTTGCCAAGCTAATGTTCTTCTGCTGCGGCTGCCAGTCCAGCCGCCATTTCAGGGTCGCCCAGCCCCTGCCCGGACATTTCGTCCACGAGTCTCGCTTCTCCAAAACCTCAGGCCGAAGCTTTCTCACCAAGAAATGTCGAGGAGACTTGCTGTACGTGAGCGATCCCTGTGAGCATTCCAACGGGAGCGACGAGGATGATTTGGGGATCTACAGAGGGGTATTTCGGGGATTTATGAGATCGAAGACTAGGGCATTCTTGATCAGACGGCAAGTGAGGTTGGAAGAGAGGACCAGATGCCCCTATTGTGGGGCTCGGGTGTGGAGTATGACATCCGCTCGACTCGTACCCAAGAGCGCGGCTAGGCGGCTTGGGACGCATGATGGAGGCCTGGAATATTTCGTGTGCGTTAACGGCCATTTGCATGGCTCTTGTTGGCTCGTTCCTCTATCATCGGAGGAAGACAGGGCCAACAACGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGCGGCGGAGTGTCACAGAGAAGTTCGTGAGATTGGGTTTGAAGACCGGACGGTGACAGATGAAAGCGCGAGCTCCACGGGGGAGGAGATTGTAGATAGTCGCGGAGAGGTCCGCGTCCACACCACAGATTAG

Coding sequence (CDS)

ATGAACGCCAACAGCAACAGGAGGGTCAGACCCTCTCCGTCGCCTCAGGGCTACGACTCCAACGACTCCGGCATCCTCAACGAGCGCATACTTCTCCTCGTATTTCAAACAATCAAGTGGGACTTACAGACGCTTTGCATCACCGCCTCCCTCAATTGTAAACTTCGAGCCATAGCCGACAGACTGCTCTGGCGCCAGCTCTGTCTCAATCGAGCTCCCCGAATGGTGGCCACATTGACCACCGGGGCTCCCAATGCCCGAGTCGGCGGTGGATGGAACGCGCTTGCCAAGCTAATGTTCTTCTGCTGCGGCTGCCAGTCCAGCCGCCATTTCAGGGTCGCCCAGCCCCTGCCCGGACATTTCGTCCACGAGTCTCGCTTCTCCAAAACCTCAGGCCGAAGCTTTCTCACCAAGAAATGTCGAGGAGACTTGCTGTACGTGAGCGATCCCTGTGAGCATTCCAACGGGAGCGACGAGGATGATTTGGGGATCTACAGAGGGGTATTTCGGGGATTTATGAGATCGAAGACTAGGGCATTCTTGATCAGACGGCAAGTGAGGTTGGAAGAGAGGACCAGATGCCCCTATTGTGGGGCTCGGGTGTGGAGTATGACATCCGCTCGACTCGTACCCAAGAGCGCGGCTAGGCGGCTTGGGACGCATGATGGAGGCCTGGAATATTTCGTGTGCGTTAACGGCCATTTGCATGGCTCTTGTTGGCTCGTTCCTCTATCATCGGAGGAAGACAGGGCCAACAACGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGAGGAGGCGGCGGAGTGTCACAGAGAAGTTCGTGAGATTGGGTTTGAAGACCGGACGGTGACAGATGAAAGCGCGAGCTCCACGGGGGAGGAGATTGTAGATAGTCGCGGAGAGGTCCGCGTCCACACCACAGATTAG

Protein sequence

MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIADRLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVPLSSEEDRANNEEEEEEEEEEEEEEEEEEAAECHREVREIGFEDRTVTDESASSTGEEIVDSRGEVRVHTTD

Homology

[Close]

BLAST of CmaCh02G018090 vs. Swiss-Prot
Match: EDL3_ARATH (EID1-like F-box protein 3 OS=Arabidopsis thaliana GN=EDL3 PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 5.3e-90
Identity = 160/257 (62.26%), Postives = 203/257 (78.99%), Query Frame = 1


Query: 4   NSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIADRLL 63
           N+NRR++ +   +  +S  SGI NER+L+LVF++I WD+ TLC  ASL+ +  AIA R+L
Sbjct: 13  NTNRRLKFNQPSRLPNSGKSGIENERVLVLVFESISWDIHTLCTIASLSRRFCAIARRIL 72

Query: 64  WRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVH 123
           WR+LC+NRAP MVA L+   P+ R+ GGW+ALAKLMFFC G +S+R+F ++QP  GHF  
Sbjct: 73  WRRLCVNRAPGMVAALSGEDPSGRIDGGWHALAKLMFFCGGGESTRYFNLSQPTSGHFAC 132

Query: 124 ESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIR 183
           ESRFSKTSGR FL K CR DLLY+SDPCEH     ++ LG++RGVFR FMRSKTR  L+R
Sbjct: 133 ESRFSKTSGRFFLPKNCRRDLLYMSDPCEHQAVGGDEHLGVFRGVFREFMRSKTRECLVR 192

Query: 184 RQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVP 243
           RQ  LEE+ RCPYCG RVWSMT+ARLVPKSAARRLG+ +GGLE+FVCVNGHLHG+CWL+P
Sbjct: 193 RQAALEEKVRCPYCGGRVWSMTAARLVPKSAARRLGSREGGLEFFVCVNGHLHGTCWLIP 252

Query: 244 LSSEEDRANNEEEEEEE 261
           LSSEE+  N E+++  +
Sbjct: 253 LSSEEE-DNGEDDDNSD 268

[Close]

BLAST of CmaCh02G018090 vs. Swiss-Prot
Match: EDL1_ARATH (EID1-like F-box protein 1 OS=Arabidopsis thaliana GN=EDL1 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.0e-53
Identity = 104/244 (42.62%), Postives = 153/244 (62.70%), Query Frame = 1


Query: 24  GILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD---RLLWRQLCLNRAPRMVATLT 83
           G LNE +LLLVFQ + W+ +   + A+L+C  R   D   R+LW++ C  RAP+M+  L 
Sbjct: 20  GHLNEDVLLLVFQHLNWNPK---LVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQ 79

Query: 84  TGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVHESRFSKTSGRSFLTKKC 143
           +   +  + G W AL KL+ +C GC     F  +  +PGHFV+ +RFS+T GRS L  +C
Sbjct: 80  SSGSHC-IDGNWRALGKLLIYCSGCTQGGLFNSSVQIPGHFVYRTRFSRTLGRSLLPPQC 139

Query: 144 RGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIRRQVRLEERTRCPYCGAR 203
           R D+LYV DPCEH +  +E D+G++RG+F+ F  SK R  +I + V       CPYC A+
Sbjct: 140 RTDVLYVCDPCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKAVPFHPSEVCPYCKAK 199

Query: 204 VWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVPLSSEEDRANNEEEEEEE 263
           +WSM  A+++P+SA  RL  ++  +EYFVC+NGHL G C L PLS  ED   +E+    E
Sbjct: 200 LWSMLQAKIIPQSACIRLEAYEDCIEYFVCLNGHLLGICTLAPLSDSEDAIPSEDNNHTE 259

Query: 264 EEEE 265
           ++++
Sbjct: 260 KKQD 259

[Close]

BLAST of CmaCh02G018090 vs. Swiss-Prot
Match: EDL2_ARATH (EID1-like F-box protein 2 OS=Arabidopsis thaliana GN=EDL2 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-52
Identity = 101/227 (44.49%), Postives = 145/227 (63.88%), Query Frame = 1


Query: 24  GILNERILLLVFQTIKWDLQTLCITASLNCK-LRAIADRLLWRQLCLNRAPRMVATLTTG 83
           G L+E +L L+ Q + W+   +  T S  CK    +A RLLW++ C  RAP+M++ L + 
Sbjct: 20  GHLSEEVLFLMVQHLNWNPNVIA-TLSCVCKWFDDLAKRLLWKEFCRARAPKMMSDLQSS 79

Query: 84  APNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVHESRFSKTSGRSFLTKKCR- 143
             ++ V G W AL KL+ +C G      F   Q + GHFVH +RFS+TSGRSFL  +CR 
Sbjct: 80  GSHS-VDGSWRALGKLLIYCSGSSKGGLFNDVQ-ISGHFVHRTRFSRTSGRSFLPPQCRT 139

Query: 144 GDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIRRQVRLEERTRCPYCGARV 203
            D+LYVSDPCEH +  ++ DLG +RG+F+ F  SK R  LI++         CPYC A++
Sbjct: 140 DDILYVSDPCEHLDQGEDGDLGFFRGIFKSFSMSKVRKLLIKKGTPFHPTEVCPYCKAKL 199

Query: 204 WSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVPLSSEE 249
           WSM  A+++P+SA+ RLG ++  +EY+VC+NGH+ G C L+PLS  E
Sbjct: 200 WSMLQAKMIPQSASCRLGAYEDSIEYYVCLNGHMLGVCTLLPLSDSE 243

[Close]

BLAST of CmaCh02G018090 vs. TrEMBL
Match: A0A0A0KHK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408800 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 9.3e-142
Identity = 256/309 (82.85%), Postives = 282/309 (91.26%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           MNAN+NRR +PSPSPQG +S+DSGI NERILLLVF+TIKWDL+TLCITASLN KLRAIA+
Sbjct: 1   MNANTNRRFKPSPSPQGSESDDSGIFNERILLLVFRTIKWDLRTLCITASLNRKLRAIAE 60

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC NRAPRM+A LTTGAPNARVGGGWNALAKLMFFCCGCQSSRHF+VAQPLPGH
Sbjct: 61  RLLWRELCFNRAPRMLAALTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFKVAQPLPGH 120

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FVHESRFSKTSG+SFLTKKCRGDLLYVSDPCEHSNG DED+LGIYRG+FRGFMRSKTRAF
Sbjct: 121 FVHESRFSKTSGQSFLTKKCRGDLLYVSDPCEHSNGRDEDNLGIYRGIFRGFMRSKTRAF 180

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LI+R+VRLEE TRCPYCGARVWSMT+ARLVPKS ARRLGTHDGGLEYFVCVNGHLHGSCW
Sbjct: 181 LIKREVRLEETTRCPYCGARVWSMTTARLVPKSVARRLGTHDGGLEYFVCVNGHLHGSCW 240

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEAAECHREVREIGFEDRTVTDESASSTGEE 300
           LVPLSSEED   N ++ ++EEEEEEEEEE    EC+ EV E+GF+DRTVTDES SS G  
Sbjct: 241 LVPLSSEEDDGGNSKDVDDEEEEEEEEEE---VECYGEVGEMGFDDRTVTDESRSSRGGG 300

Query: 301 IVDSRGEVR 310
            V + G++R
Sbjct: 301 PVPT-GQIR 305

[Close]

BLAST of CmaCh02G018090 vs. TrEMBL
Match: F6HQ66_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00350 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.1e-110
Identity = 209/301 (69.44%), Postives = 245/301 (81.40%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           M+AN   R+  SP P   DS +SGILNERIL+L+F++IKWD+  LC  +++N KLRA+A 
Sbjct: 58  MSANQRLRLN-SPGPAS-DSGESGILNERILVLIFESIKWDIHVLCAASAVNRKLRAVAT 117

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC+ RAPRMV  L TGAPN R+GGGW+ALAKLMFFCCGC+S+RHFRV++P PGH
Sbjct: 118 RLLWRELCVYRAPRMVTALATGAPNGRLGGGWHALAKLMFFCCGCESTRHFRVSRPSPGH 177

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FV ESRFSKTSGRSFLTKKC GDLLYVSDPCEH  G  EDDLGIYRGVFRGFMRSKTRA 
Sbjct: 178 FVKESRFSKTSGRSFLTKKCSGDLLYVSDPCEHPMGEREDDLGIYRGVFRGFMRSKTRAC 237

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LIRRQV+LEER  CPYCGARVWSMT+ARLVPKSAARRLGTHDGGLEYFVC+NGHLHG+CW
Sbjct: 238 LIRRQVKLEERVCCPYCGARVWSMTAARLVPKSAARRLGTHDGGLEYFVCLNGHLHGTCW 297

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEAAECHREVREIGFEDRTVTDESASSTGEE 300
           LVPLSS+ED  N ++E+ ++   ++ ++    +EC         +DRTVTD S SS  EE
Sbjct: 298 LVPLSSDED--NGDDEDADDGCSDDADDGSGRSEC---------DDRTVTDGSVSSISEE 345

Query: 301 I 302
           I
Sbjct: 358 I 345

[Close]

BLAST of CmaCh02G018090 vs. TrEMBL
Match: A0A067G021_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022473mg PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 7.4e-107
Identity = 191/272 (70.22%), Postives = 232/272 (85.29%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           M+ N+N+R+RP+P  Q  +S DSGI NERILLLVF+++ WDL  LC+TASL+ KLRAIA+
Sbjct: 1   MSGNANKRLRPNPPSQVPESGDSGIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAE 60

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC  RAPRM+ TL  GAPN R+ GGW+ALAKLMF CCGC+S+R+F+V++  P H
Sbjct: 61  RLLWRKLCECRAPRMIETLANGAPNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAH 120

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FV  SRFSKTSGRSFLTKKCRGDLLYVSDPCEH  G+ EDDLGI+RGVFRGF++S TRA 
Sbjct: 121 FVQASRFSKTSGRSFLTKKCRGDLLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRAC 180

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LIRR+V LEER +CPYCGARVWSMT+ARLVPKSAARRLG+HDGGLEYFVC+NGHLHGSCW
Sbjct: 181 LIRRRVELEERVKCPYCGARVWSMTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCW 240

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEA 273
           LVPLSSEED  + +++E+ E+ E+  ++ + A
Sbjct: 241 LVPLSSEEDACDEDDDEDGEDGEDGGDDPDGA 272

[Close]

BLAST of CmaCh02G018090 vs. TrEMBL
Match: V4U011_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020962mg PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 7.4e-107
Identity = 191/272 (70.22%), Postives = 232/272 (85.29%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           M+ N+N+R+RP+P  Q  +S DSGI NERILLLVF+++ WDL  LC+TASL+ KLRAIA+
Sbjct: 49  MSGNANKRLRPNPPSQVPESGDSGIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAE 108

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC  RAPRM+ TL  GAPN R+ GGW+ALAKLMF CCGC+S+R+F+V++  P H
Sbjct: 109 RLLWRKLCECRAPRMIETLANGAPNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAH 168

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FV  SRFSKTSGRSFLTKKCRGDLLYVSDPCEH  G+ EDDLGI+RGVFRGF++S TRA 
Sbjct: 169 FVQASRFSKTSGRSFLTKKCRGDLLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRAC 228

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LIRR+V LEER +CPYCGARVWSMT+ARLVPKSAARRLG+HDGGLEYFVC+NGHLHGSCW
Sbjct: 229 LIRRRVELEERVKCPYCGARVWSMTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCW 288

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEA 273
           LVPLSSEED  + +++E+ E+ E+  ++ + A
Sbjct: 289 LVPLSSEEDACDEDDDEDGEDGEDGGDDPDGA 320

[Close]

BLAST of CmaCh02G018090 vs. TrEMBL
Match: A0A061DQY7_THECC (Circadian clock coupling factor ZGT OS=Theobroma cacao GN=TCM_004444 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106
Identity = 199/299 (66.56%), Postives = 240/299 (80.27%), Query Frame = 1


Query: 4   NSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIADRLL 63
           +S +R R +P  Q  DS+DSG L+ERILLLV ++IKWDLQ +C+TAS+N KLRA A RLL
Sbjct: 2   SSTQRRRLNPPSQDSDSDDSGFLDERILLLVLESIKWDLQVICLTASVNRKLRATAKRLL 61

Query: 64  WRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVH 123
           WR+LC+ RAPRMVATL  GAPN R+GGGW++LAKLMF+CCGC+S+RHF+++ P P HF  
Sbjct: 62  WRKLCVYRAPRMVATLANGAPNGRIGGGWDSLAKLMFYCCGCESTRHFKLSGPSPSHFAI 121

Query: 124 ESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIR 183
            SRFSKTSGRSFLTKKCRGDLL+VSDPCEH  G  EDDLGIYRGVFRGFMRSKTRA LIR
Sbjct: 122 ASRFSKTSGRSFLTKKCRGDLLFVSDPCEHPMGDKEDDLGIYRGVFRGFMRSKTRACLIR 181

Query: 184 RQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVP 243
           RQV  EER RCPYCG RVWSMT+ARLVPKSAARRLG+ DG LEYFVCVNGHLHG+CWLVP
Sbjct: 182 RQVAFEERVRCPYCGTRVWSMTTARLVPKSAARRLGSRDGRLEYFVCVNGHLHGTCWLVP 241

Query: 244 LSSEEDRANNEEEEEEEEEEEEEEEEEEAAECHREVREIGFEDRTVTDESASSTGEEIV 303
           LSS+E+  + EE+ + +++++  EE +  A  H          +TVT+ S SS GE+++
Sbjct: 242 LSSDEEVCDQEEDGDGDDDDDGSEEIDGKAYNH----------QTVTNGSTSSLGEDVL 290

[Close]

BLAST of CmaCh02G018090 vs. TAIR10
Match: AT3G63060.1 (AT3G63060.1 EID1-like 3)

HSP 1 Score: 332.4 bits (851), Expect = 3.0e-91
Identity = 160/257 (62.26%), Postives = 203/257 (78.99%), Query Frame = 1


Query: 4   NSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIADRLL 63
           N+NRR++ +   +  +S  SGI NER+L+LVF++I WD+ TLC  ASL+ +  AIA R+L
Sbjct: 13  NTNRRLKFNQPSRLPNSGKSGIENERVLVLVFESISWDIHTLCTIASLSRRFCAIARRIL 72

Query: 64  WRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVH 123
           WR+LC+NRAP MVA L+   P+ R+ GGW+ALAKLMFFC G +S+R+F ++QP  GHF  
Sbjct: 73  WRRLCVNRAPGMVAALSGEDPSGRIDGGWHALAKLMFFCGGGESTRYFNLSQPTSGHFAC 132

Query: 124 ESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIR 183
           ESRFSKTSGR FL K CR DLLY+SDPCEH     ++ LG++RGVFR FMRSKTR  L+R
Sbjct: 133 ESRFSKTSGRFFLPKNCRRDLLYMSDPCEHQAVGGDEHLGVFRGVFREFMRSKTRECLVR 192

Query: 184 RQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVP 243
           RQ  LEE+ RCPYCG RVWSMT+ARLVPKSAARRLG+ +GGLE+FVCVNGHLHG+CWL+P
Sbjct: 193 RQAALEEKVRCPYCGGRVWSMTAARLVPKSAARRLGSREGGLEFFVCVNGHLHGTCWLIP 252

Query: 244 LSSEEDRANNEEEEEEE 261
           LSSEE+  N E+++  +
Sbjct: 253 LSSEEE-DNGEDDDNSD 268

[Close]

BLAST of CmaCh02G018090 vs. TAIR10
Match: AT5G15440.1 (AT5G15440.1 EID1-like 1)

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-54
Identity = 104/244 (42.62%), Postives = 153/244 (62.70%), Query Frame = 1


Query: 24  GILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD---RLLWRQLCLNRAPRMVATLT 83
           G LNE +LLLVFQ + W+ +   + A+L+C  R   D   R+LW++ C  RAP+M+  L 
Sbjct: 20  GHLNEDVLLLVFQHLNWNPK---LVATLSCVCRWFDDFAKRVLWKEFCKTRAPKMMLDLQ 79

Query: 84  TGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVHESRFSKTSGRSFLTKKC 143
           +   +  + G W AL KL+ +C GC     F  +  +PGHFV+ +RFS+T GRS L  +C
Sbjct: 80  SSGSHC-IDGNWRALGKLLIYCSGCTQGGLFNSSVQIPGHFVYRTRFSRTLGRSLLPPQC 139

Query: 144 RGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIRRQVRLEERTRCPYCGAR 203
           R D+LYV DPCEH +  +E D+G++RG+F+ F  SK R  +I + V       CPYC A+
Sbjct: 140 RTDVLYVCDPCEHLDQGEEGDVGLFRGIFKSFPTSKVRKVIINKAVPFHPSEVCPYCKAK 199

Query: 204 VWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVPLSSEEDRANNEEEEEEE 263
           +WSM  A+++P+SA  RL  ++  +EYFVC+NGHL G C L PLS  ED   +E+    E
Sbjct: 200 LWSMLQAKIIPQSACIRLEAYEDCIEYFVCLNGHLLGICTLAPLSDSEDAIPSEDNNHTE 259

Query: 264 EEEE 265
           ++++
Sbjct: 260 KKQD 259

[Close]

BLAST of CmaCh02G018090 vs. TAIR10
Match: AT5G39360.1 (AT5G39360.1 EID1-like 2)

HSP 1 Score: 208.0 bits (528), Expect = 8.5e-54
Identity = 101/227 (44.49%), Postives = 145/227 (63.88%), Query Frame = 1


Query: 24  GILNERILLLVFQTIKWDLQTLCITASLNCK-LRAIADRLLWRQLCLNRAPRMVATLTTG 83
           G L+E +L L+ Q + W+   +  T S  CK    +A RLLW++ C  RAP+M++ L + 
Sbjct: 20  GHLSEEVLFLMVQHLNWNPNVIA-TLSCVCKWFDDLAKRLLWKEFCRARAPKMMSDLQSS 79

Query: 84  APNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGHFVHESRFSKTSGRSFLTKKCR- 143
             ++ V G W AL KL+ +C G      F   Q + GHFVH +RFS+TSGRSFL  +CR 
Sbjct: 80  GSHS-VDGSWRALGKLLIYCSGSSKGGLFNDVQ-ISGHFVHRTRFSRTSGRSFLPPQCRT 139

Query: 144 GDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAFLIRRQVRLEERTRCPYCGARV 203
            D+LYVSDPCEH +  ++ DLG +RG+F+ F  SK R  LI++         CPYC A++
Sbjct: 140 DDILYVSDPCEHLDQGEDGDLGFFRGIFKSFSMSKVRKLLIKKGTPFHPTEVCPYCKAKL 199

Query: 204 WSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCWLVPLSSEE 249
           WSM  A+++P+SA+ RLG ++  +EY+VC+NGH+ G C L+PLS  E
Sbjct: 200 WSMLQAKMIPQSASCRLGAYEDSIEYYVCLNGHMLGVCTLLPLSDSE 243

[Close]

BLAST of CmaCh02G018090 vs. NCBI nr
Match: gi|449444911|ref|XP_004140217.1| (PREDICTED: EID1-like F-box protein 3 [Cucumis sativus])

HSP 1 Score: 511.1 bits (1315), Expect = 1.3e-141
Identity = 256/309 (82.85%), Postives = 282/309 (91.26%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           MNAN+NRR +PSPSPQG +S+DSGI NERILLLVF+TIKWDL+TLCITASLN KLRAIA+
Sbjct: 1   MNANTNRRFKPSPSPQGSESDDSGIFNERILLLVFRTIKWDLRTLCITASLNRKLRAIAE 60

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC NRAPRM+A LTTGAPNARVGGGWNALAKLMFFCCGCQSSRHF+VAQPLPGH
Sbjct: 61  RLLWRELCFNRAPRMLAALTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFKVAQPLPGH 120

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FVHESRFSKTSG+SFLTKKCRGDLLYVSDPCEHSNG DED+LGIYRG+FRGFMRSKTRAF
Sbjct: 121 FVHESRFSKTSGQSFLTKKCRGDLLYVSDPCEHSNGRDEDNLGIYRGIFRGFMRSKTRAF 180

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LI+R+VRLEE TRCPYCGARVWSMT+ARLVPKS ARRLGTHDGGLEYFVCVNGHLHGSCW
Sbjct: 181 LIKREVRLEETTRCPYCGARVWSMTTARLVPKSVARRLGTHDGGLEYFVCVNGHLHGSCW 240

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEAAECHREVREIGFEDRTVTDESASSTGEE 300
           LVPLSSEED   N ++ ++EEEEEEEEEE    EC+ EV E+GF+DRTVTDES SS G  
Sbjct: 241 LVPLSSEEDDGGNSKDVDDEEEEEEEEEE---VECYGEVGEMGFDDRTVTDESRSSRGGG 300

Query: 301 IVDSRGEVR 310
            V + G++R
Sbjct: 301 PVPT-GQIR 305

[Close]

BLAST of CmaCh02G018090 vs. NCBI nr
Match: gi|659096988|ref|XP_008449385.1| (PREDICTED: EID1-like F-box protein 3 [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 7.3e-140
Identity = 251/299 (83.95%), Postives = 273/299 (91.30%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           MNAN+NRR +PSPSPQG +S+DSGI NERILLLVF+TIKWDL+TLCITASLN KLRAIA+
Sbjct: 1   MNANTNRRFKPSPSPQGSESDDSGIFNERILLLVFRTIKWDLRTLCITASLNRKLRAIAE 60

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC NRAPRM+A LTTGAPNARVGGGWNALAKLMFFCCGCQSSRHF+VAQPLPGH
Sbjct: 61  RLLWRELCFNRAPRMLAALTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFKVAQPLPGH 120

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FVHESRFSKTSG+SFLTKKCRGDLLYVSDPCEHSNG DEDDLGIYRG+FRGFMRSKTRAF
Sbjct: 121 FVHESRFSKTSGQSFLTKKCRGDLLYVSDPCEHSNGRDEDDLGIYRGIFRGFMRSKTRAF 180

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LI+RQVRLEE TRCPYCGARVWSMT+ARLVPKS ARRLGTHDGGLEYFVCVNGHLHGSCW
Sbjct: 181 LIKRQVRLEETTRCPYCGARVWSMTTARLVPKSVARRLGTHDGGLEYFVCVNGHLHGSCW 240

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEAAECHREVREIGFEDRTVTDESASSTGE 300
           LVPLSSEED   N  +++++E EEEEEE       + EV E+GF+DRTVTDES SS GE
Sbjct: 241 LVPLSSEEDDGGNSNDDDDDEGEEEEEE----VGFYGEVGEMGFDDRTVTDESRSSRGE 295

[Close]

BLAST of CmaCh02G018090 vs. NCBI nr
Match: gi|731395314|ref|XP_002276328.2| (PREDICTED: EID1-like F-box protein 3 [Vitis vinifera])

HSP 1 Score: 407.9 bits (1047), Expect = 1.6e-110
Identity = 209/301 (69.44%), Postives = 245/301 (81.40%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           M+AN   R+  SP P   DS +SGILNERIL+L+F++IKWD+  LC  +++N KLRA+A 
Sbjct: 58  MSANQRLRLN-SPGPAS-DSGESGILNERILVLIFESIKWDIHVLCAASAVNRKLRAVAT 117

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC+ RAPRMV  L TGAPN R+GGGW+ALAKLMFFCCGC+S+RHFRV++P PGH
Sbjct: 118 RLLWRELCVYRAPRMVTALATGAPNGRLGGGWHALAKLMFFCCGCESTRHFRVSRPSPGH 177

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FV ESRFSKTSGRSFLTKKC GDLLYVSDPCEH  G  EDDLGIYRGVFRGFMRSKTRA 
Sbjct: 178 FVKESRFSKTSGRSFLTKKCSGDLLYVSDPCEHPMGEREDDLGIYRGVFRGFMRSKTRAC 237

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LIRRQV+LEER  CPYCGARVWSMT+ARLVPKSAARRLGTHDGGLEYFVC+NGHLHG+CW
Sbjct: 238 LIRRQVKLEERVCCPYCGARVWSMTAARLVPKSAARRLGTHDGGLEYFVCLNGHLHGTCW 297

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEAAECHREVREIGFEDRTVTDESASSTGEE 300
           LVPLSS+ED  N ++E+ ++   ++ ++    +EC         +DRTVTD S SS  EE
Sbjct: 298 LVPLSSDED--NGDDEDADDGCSDDADDGSGRSEC---------DDRTVTDGSVSSISEE 345

Query: 301 I 302
           I
Sbjct: 358 I 345

[Close]

BLAST of CmaCh02G018090 vs. NCBI nr
Match: gi|568852185|ref|XP_006479760.1| (PREDICTED: EID1-like F-box protein 3 [Citrus sinensis])

HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-106
Identity = 191/272 (70.22%), Postives = 232/272 (85.29%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           M+ N+N+R+RP+P  Q  +S DSGI NERILLLVF+++ WDL  LC+TASL+ KLRAIA+
Sbjct: 1   MSGNANKRLRPNPPSQVPESGDSGIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAE 60

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC  RAPRM+ TL  GAPN R+ GGW+ALAKLMF CCGC+S+R+F+V++  P H
Sbjct: 61  RLLWRKLCECRAPRMIETLANGAPNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAH 120

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FV  SRFSKTSGRSFLTKKCRGDLLYVSDPCEH  G+ EDDLGI+RGVFRGF++S TRA 
Sbjct: 121 FVQASRFSKTSGRSFLTKKCRGDLLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRAC 180

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LIRR+V LEER +CPYCGARVWSMT+ARLVPKSAARRLG+HDGGLEYFVC+NGHLHGSCW
Sbjct: 181 LIRRRVELEERVKCPYCGARVWSMTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCW 240

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEA 273
           LVPLSSEED  + +++E+ E+ E+  ++ + A
Sbjct: 241 LVPLSSEEDACDEDDDEDGEDGEDGGDDPDGA 272

[Close]

BLAST of CmaCh02G018090 vs. NCBI nr
Match: gi|567903284|ref|XP_006444130.1| (hypothetical protein CICLE_v10020962mg [Citrus clementina])

HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-106
Identity = 191/272 (70.22%), Postives = 232/272 (85.29%), Query Frame = 1


Query: 1   MNANSNRRVRPSPSPQGYDSNDSGILNERILLLVFQTIKWDLQTLCITASLNCKLRAIAD 60
           M+ N+N+R+RP+P  Q  +S DSGI NERILLLVF+++ WDL  LC+TASL+ KLRAIA+
Sbjct: 49  MSGNANKRLRPNPPSQVPESGDSGIFNERILLLVFESVGWDLHMLCLTASLDRKLRAIAE 108

Query: 61  RLLWRQLCLNRAPRMVATLTTGAPNARVGGGWNALAKLMFFCCGCQSSRHFRVAQPLPGH 120
           RLLWR+LC  RAPRM+ TL  GAPN R+ GGW+ALAKLMF CCGC+S+R+F+V++  P H
Sbjct: 109 RLLWRKLCECRAPRMIETLANGAPNGRINGGWHALAKLMFHCCGCESTRNFKVSKASPAH 168

Query: 121 FVHESRFSKTSGRSFLTKKCRGDLLYVSDPCEHSNGSDEDDLGIYRGVFRGFMRSKTRAF 180
           FV  SRFSKTSGRSFLTKKCRGDLLYVSDPCEH  G+ EDDLGI+RGVFRGF++S TRA 
Sbjct: 169 FVQASRFSKTSGRSFLTKKCRGDLLYVSDPCEHPMGNKEDDLGIFRGVFRGFLKSTTRAC 228

Query: 181 LIRRQVRLEERTRCPYCGARVWSMTSARLVPKSAARRLGTHDGGLEYFVCVNGHLHGSCW 240
           LIRR+V LEER +CPYCGARVWSMT+ARLVPKSAARRLG+HDGGLEYFVC+NGHLHGSCW
Sbjct: 229 LIRRRVELEERVKCPYCGARVWSMTAARLVPKSAARRLGSHDGGLEYFVCINGHLHGSCW 288

Query: 241 LVPLSSEEDRANNEEEEEEEEEEEEEEEEEEA 273
           LVPLSSEED  + +++E+ E+ E+  ++ + A
Sbjct: 289 LVPLSSEEDACDEDDDEDGEDGEDGGDDPDGA 320

The following BLAST results are available for this feature:

BLAST of CmaCh02G018090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EDL3_ARATH	5.3e-90	62.26	EID1-like F-box protein 3 OS=Arabidopsis thaliana GN=EDL3 PE=2 SV=1	[more]
EDL1_ARATH	4.0e-53	42.62	EID1-like F-box protein 1 OS=Arabidopsis thaliana GN=EDL1 PE=2 SV=1	[more]
EDL2_ARATH	1.5e-52	44.49	EID1-like F-box protein 2 OS=Arabidopsis thaliana GN=EDL2 PE=2 SV=1	[more]

BLAST of CmaCh02G018090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHK8_CUCSA	9.3e-142	82.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G408800 PE=4 SV=1	[more]
F6HQ66_VITVI	1.1e-110	69.44	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0104g00350 PE=4 SV=...	[more]
A0A067G021_CITSI	7.4e-107	70.22	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022473mg PE=4 SV=1	[more]
V4U011_9ROSI	7.4e-107	70.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020962mg PE=4 SV=1	[more]
A0A061DQY7_THECC	1.7e-106	66.56	Circadian clock coupling factor ZGT OS=Theobroma cacao GN=TCM_004444 PE=4 SV=1	[more]

BLAST of CmaCh02G018090 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G63060.1	3.0e-91	62.26	EID1-like 3	[more]
AT5G15440.1	2.2e-54	42.62	EID1-like 1	[more]
AT5G39360.1	8.5e-54	44.49	EID1-like 2	[more]

BLAST of CmaCh02G018090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449444911\|ref\|XP_004140217.1\|	1.3e-141	82.85	PREDICTED: EID1-like F-box protein 3 [Cucumis sativus]	[more]
gi\|659096988\|ref\|XP_008449385.1\|	7.3e-140	83.95	PREDICTED: EID1-like F-box protein 3 [Cucumis melo]	[more]
gi\|731395314\|ref\|XP_002276328.2\|	1.6e-110	69.44	PREDICTED: EID1-like F-box protein 3 [Vitis vinifera]	[more]
gi\|568852185\|ref\|XP_006479760.1\|	1.1e-106	70.22	PREDICTED: EID1-like F-box protein 3 [Citrus sinensis]	[more]
gi\|567903284\|ref\|XP_006444130.1\|	1.1e-106	70.22	hypothetical protein CICLE_v10020962mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009738	abscisic acid-activated signaling pathway
biological_process	GO:0006457	protein folding
biological_process	GO:0010029	regulation of seed germination
biological_process	GO:0009408	response to heat
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G018090.1	CmaCh02G018090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 244..279 scor
None	No IPR available	PANTHER	PTHR31348	FAMILY NOT NAMED	coord: 19..253 score: 2.0E
None	No IPR available	PANTHER	PTHR31348:SF3	EID1-LIKE F-BOX PROTEIN 3	coord: 19..253 score: 2.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G018090	Cucsa.184270	Cucumber (Gy14) v1	cgycmaB0532
CmaCh02G018090	Cla006079	Watermelon (97103) v1	cmawmB563
CmaCh02G018090	Csa6G408800	Cucumber (Chinese Long) v2	cmacuB637
CmaCh02G018090	ClCG07G000060	Watermelon (Charleston Gray)	cmawcgB567
CmaCh02G018090	CSPI06G21830	Wild cucumber (PI 183967)	cmacpiB642
CmaCh02G018090	CmoCh02G018550	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G018090	Lsi05G009050	Bottle gourd (USVL1VR-Ls)	cmalsiB582
CmaCh02G018090	Cp4.1LG05g01500	Cucurbita pepo (Zucchini)	cmacpeB647
CmaCh02G018090	CsaV3_6G036880	Cucumber (Chinese Long) v3	cmacucB0761
CmaCh02G018090	Cla97C07G128310	Watermelon (97103) v2	cmawmbB655
CmaCh02G018090	Bhi05G000270	Wax gourd	cmawgoB0741
CmaCh02G018090	Carg26558	Silver-seed gourd	carcmaB1290

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G018090	Silver-seed gourd	carcmaB1051
CmaCh02G018090	Cucumber (Chinese Long) v3	cmacucB0750
CmaCh02G018090	Watermelon (97103) v2	cmawmbB657
CmaCh02G018090	Wax gourd	cmawgoB0730
CmaCh02G018090	Cucurbita maxima (Rimu)	cmacmaB450
CmaCh02G018090	Cucurbita moschata (Rifu)	cmacmoB598
CmaCh02G018090	Wild cucumber (PI 183967)	cmacpiB632
CmaCh02G018090	Cucumber (Chinese Long) v2	cmacuB628
CmaCh02G018090	Melon (DHL92) v3.5.1	cmameB577
CmaCh02G018090	Watermelon (Charleston Gray)	cmawcgB568
CmaCh02G018090	Watermelon (97103) v1	cmawmB558
CmaCh02G018090	Cucurbita pepo (Zucchini)	cmacpeB615
CmaCh02G018090	Cucumber (Gy14) v2	cgybcmaB818
CmaCh02G018090	Cucumber (Gy14) v2	cgybcmaB828
CmaCh02G018090	Melon (DHL92) v3.6.1	cmamedB659