CmaCh02G018040 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCTTTTTCATTCAATGCAACACAACAAAACAATATTGAGGTTTACTTTGATAGTGGTGTCTGGTATGAGAGCAGATAAGATTATGGGATTGCCATCGGCTTTGCAGTCTGCATTGTTTATTTAAAGGAAGTGACAAGTAATGGGTCGAAACCAGAGAAAAAACAAACGCATCAGACAATTTATGTTTTTCTAAAACAAAAACTCATAGGATTGGACGAAGCCAAGAAAATAGATAGGGACCCTGTTTTGCTTCAACGTCAAATGTCTGGTTATACCTAAAGAAGATCAAAAATCAAGGAAGAAGACGAAGAGGACGAAGAAGAAGAGATGGTTGGTTGTAGCCTGAAGATTTCAGCCGCTTTTCTGGCTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTTACGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAGCAATTATGATTTCTACAACATATCTCCTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTGCAACTTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGATTCGTGTCAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAATACCCATTTGATGATTAG ATGGCGCTTTTTCATTCAATGCAACACAACAAAACAATATTGAGGTTTACTTTGATAGTGGTGTCTGGTATGAGAGCAGATAAGATTATGGGATTGCCATCGGCTTTGCAGTCTGCATTATCAAAAATCAAGGAAGAAGACGAAGAGGACGAAGAAGAAGAGATGGTTGGTTGTAGCCTGAAGATTTCAGCCGCTTTTCTGGCTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTTACGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAGCAATTATGATTTCTACAACATATCTCCTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTGCAACTTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGATTCGTGTCAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAATACCCATTTGATGATTAG ATGGCGCTTTTTCATTCAATGCAACACAACAAAACAATATTGAGGTTTACTTTGATAGTGGTGTCTGGTATGAGAGCAGATAAGATTATGGGATTGCCATCGGCTTTGCAGTCTGCATTATCAAAAATCAAGGAAGAAGACGAAGAGGACGAAGAAGAAGAGATGGTTGGTTGTAGCCTGAAGATTTCAGCCGCTTTTCTGGCTTTGTTTGGCTTCTTCGCTATGGTGGTGAGCGTTCCAAACACGGGAGTCAAGTCAGTTTTGTGCAACTTACGAATTTTCACGGGGGGCGATCCTTTTGCCGTGAGTCTGGATTACGTTCTAAAAGAATTGGAGAGTTCGACTCCCACTACAAGCAATTATGATTTCTACAACATATCTCCTTATCCTAATTCCTTCGCTTACGGCCATGCTTCCTGCAACCAAAGCCTTGCAACTTCAGACTGCACCACTTGTCTTGGCGCTGCTAAGACCAACATGTTGGATTCGTGTCAAATGAGGATTGGTGCTCGTGCGGTGCTCAATGACTGTTCAATTAGGTACGAGCAATACCCATTTGATGATTAG MALFHSMQHNKTILRFTLIVVSGMRADKIMGLPSALQSALSKIKEEDEEDEEEEMVGCSLKISAAFLALFGFFAMVVSVPNTGVKSVLCNLRIFTGGDPFAVSLDYVLKELESSTPTTSNYDFYNISPYPNSFAYGHASCNQSLATSDCTTCLGAAKTNMLDSCQMRIGARAVLNDCSIRYEQYPFDD
BLAST of CmaCh02G018040 vs. Swiss-Prot
Match: GNK2_GINBI (Antifungal protein ginkbilobin-2 OS=Ginkgo biloba GN=GNK2 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11 Identity = 45/133 (33.83%), Postives = 65/133 (48.87%), Query Frame = 1
BLAST of CmaCh02G018040 vs. TrEMBL
Match: A0A0A0KGA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G409950 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 2.7e-56 Identity = 107/134 (79.85%), Postives = 117/134 (87.31%), Query Frame = 1
BLAST of CmaCh02G018040 vs. TrEMBL
Match: M5W194_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025382mg PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-42 Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 1
BLAST of CmaCh02G018040 vs. TrEMBL
Match: A0A067JPK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21945 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-42 Identity = 86/140 (61.43%), Postives = 106/140 (75.71%), Query Frame = 1
BLAST of CmaCh02G018040 vs. TrEMBL
Match: I1JFB4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G148000 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.9e-41 Identity = 79/133 (59.40%), Postives = 104/133 (78.20%), Query Frame = 1
BLAST of CmaCh02G018040 vs. TrEMBL
Match: A0A0B2QGI3_GLYSO (Antifungal protein ginkbilobin-2 OS=Glycine soja GN=glysoja_028256 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 1.9e-41 Identity = 79/133 (59.40%), Postives = 104/133 (78.20%), Query Frame = 1
BLAST of CmaCh02G018040 vs. NCBI nr
Match: gi|700192685|gb|KGN47889.1| (hypothetical protein Csa_6G409950 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 3.9e-56 Identity = 107/134 (79.85%), Postives = 117/134 (87.31%), Query Frame = 1
BLAST of CmaCh02G018040 vs. NCBI nr
Match: gi|645259245|ref|XP_008235269.1| (PREDICTED: antifungal protein ginkbilobin-2-like [Prunus mume]) HSP 1 Score: 184.1 bits (466), Expect = 2.2e-43 Identity = 86/131 (65.65%), Postives = 105/131 (80.15%), Query Frame = 1
BLAST of CmaCh02G018040 vs. NCBI nr
Match: gi|595791225|ref|XP_007199361.1| (hypothetical protein PRUPE_ppa025382mg, partial [Prunus persica]) HSP 1 Score: 179.9 bits (455), Expect = 4.2e-42 Identity = 82/120 (68.33%), Postives = 97/120 (80.83%), Query Frame = 1
BLAST of CmaCh02G018040 vs. NCBI nr
Match: gi|643704410|gb|KDP21474.1| (hypothetical protein JCGZ_21945 [Jatropha curcas]) HSP 1 Score: 179.9 bits (455), Expect = 4.2e-42 Identity = 86/140 (61.43%), Postives = 106/140 (75.71%), Query Frame = 1
BLAST of CmaCh02G018040 vs. NCBI nr
Match: gi|802792380|ref|XP_012092263.1| (PREDICTED: antifungal protein ginkbilobin-2-like [Jatropha curcas]) HSP 1 Score: 179.1 bits (453), Expect = 7.2e-42 Identity = 81/113 (71.68%), Postives = 95/113 (84.07%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |