CmaCh02G017940 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh02G017940
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionInfluenza virus NS1A-binding protein homolog
LocationCma_Chr02 : 10008387 .. 10009424 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAGTTGATTGACCGTCTCCCAGACGCGGTTGCCCTTAGGTGCCTTGCACGTGTGCCCTTCCACCTCTATCCACAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCACAGTGCTGAACTATACAGAGTCCGGCAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTCGAACCTGAGAATCTATGGCAGCTCTATGACCCCCTCAGAGACCTTTGGATGACAATTCCGGTATTACCATCGAAAATTAGGCATCTTGCACGCTTTGGTGCTGTGTCCACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATTCTGTTGATCCGTTAACCGGAGATCAAGATAGGAACTTTGCCACCAATGAGGTGTGGTCCTATGATCCTGTAATACGCCGGTGGTCTCAATGTGCATCAATGCTTGTACCCCGTGCCATGTTTGCATGCTGTGTTTTGGATGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAAAGATGCTTGGATTCCTCTGCCTGACCTACACCACACTCACCATTCTGCTTGCACAGGGGTTGTGATTGGAGGGAAGTTGCACGTCCTGCACAAGGGATTATCAACTGTGCAAATTTTCGAGAATACGCGGCCTGGATGGAGAGTTGAAGATTATGGTTGGCTTCAAGGTCCAATGACCGTTGTCCAGGGTTCACTCTATGTGATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGCTAAGAAGGTCATTATTTCAGCATCCGAATTTCGCCAACGAATTGGGTTTGCAATGATGAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATCGGTCCCGACCGTTTGAATTGGGACGTCAAGCCAACATCTGATGTTGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACGTGCAACATCAATGACCAGATGCCATGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAG

mRNA sequence

ATGTCTGAGTTGATTGACCGTCTCCCAGACGCGGTTGCCCTTAGGTGCCTTGCACGTGTGCCCTTCCACCTCTATCCACAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCACAGTGCTGAACTATACAGAGTCCGGCAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTCGAACCTGAGAATCTATGGCAGCTCTATGACCCCCTCAGAGACCTTTGGATGACAATTCCGGTATTACCATCGAAAATTAGGCATCTTGCACGCTTTGGTGCTGTGTCCACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATTCTGTTGATCCGTTAACCGGAGATCAAGATAGGAACTTTGCCACCAATGAGGTGTGGTCCTATGATCCTGTAATACGCCGGTGGTCTCAATGTGCATCAATGCTTGTACCCCGTGCCATGTTTGCATGCTGTGTTTTGGATGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAAAGATGCTTGGATTCCTCTGCCTGACCTACACCACACTCACCATTCTGCTTGCACAGGGGTTGTGATTGGAGGGAAGTTGCACGTCCTGCACAAGGGATTATCAACTGTGCAAATTTTCGAGAATACGCGGCCTGGATGGAGAGTTGAAGATTATGGTTGGCTTCAAGGTCCAATGACCGTTGTCCAGGGTTCACTCTATGTGATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGCTAAGAAGGTCATTATTTCAGCATCCGAATTTCGCCAACGAATTGGGTTTGCAATGATGAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATCGGTCCCGACCGTTTGAATTGGGACGTCAAGCCAACATCTGATGTTGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACGTGCAACATCAATGACCAGATGCCATGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAG

Coding sequence (CDS)

ATGTCTGAGTTGATTGACCGTCTCCCAGACGCGGTTGCCCTTAGGTGCCTTGCACGTGTGCCCTTCCACCTCTATCCACAGTTGGAGCTTGTTTCTCACTCCTGGCAAGCTGCCATTCACAGTGCTGAACTATACAGAGTCCGGCAGGAGATTGGATCATCAGAAGATCTATTATGCGTATGTGCATTCGAACCTGAGAATCTATGGCAGCTCTATGACCCCCTCAGAGACCTTTGGATGACAATTCCGGTATTACCATCGAAAATTAGGCATCTTGCACGCTTTGGTGCTGTGTCCACTGCTGGAAAGTTGTTTGTGCTTGGTGGTGGCAGTGATTCTGTTGATCCGTTAACCGGAGATCAAGATAGGAACTTTGCCACCAATGAGGTGTGGTCCTATGATCCTGTAATACGCCGGTGGTCTCAATGTGCATCAATGCTTGTACCCCGTGCCATGTTTGCATGCTGTGTTTTGGATGGAAAGATTGTTGTTGCAGGTGGTTTTACTAGCTGCAGAAAATCAATTTCTCAGGCAGAAATGTACGATCCTGATAAAGATGCTTGGATTCCTCTGCCTGACCTACACCACACTCACCATTCTGCTTGCACAGGGGTTGTGATTGGAGGGAAGTTGCACGTCCTGCACAAGGGATTATCAACTGTGCAAATTTTCGAGAATACGCGGCCTGGATGGAGAGTTGAAGATTATGGTTGGCTTCAAGGTCCAATGACCGTTGTCCAGGGTTCACTCTATGTGATGAGCCATGGACATATTTTCAAGCACGATGGAGAAGCTAAGAAGGTCATTATTTCAGCATCCGAATTTCGCCAACGAATTGGGTTTGCAATGATGAGTTTGAGAGATGAAATTTACGTGATTGGAGGAGATATCGGTCCCGACCGTTTGAATTGGGACGTCAAGCCAACATCTGATGTTGACATATTGACAACAGGAGGTGAGAGGCCAACATGGCGACGTGCAACATCAATGACCAGATGCCATGGGGCTATTCGGGGATGTGCTCAGTTGAGAATTTAG

Protein sequence

MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGDQDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEMYDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQGPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPDRLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI
Homology
[Close]
BLAST of CmaCh02G017940 vs. Swiss-Prot
Match: SKI30_ARATH (F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2)

HSP 1 Score: 516.2 bits (1328), Expect = 2.9e-145
Identity = 234/345 (67.83%), Postives = 281/345 (81.45%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MS L+D +P+AVALRCLA VP HL+P LELVS SW+AAI S EL+RVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPS+IRHLA FGAV+TAG LFVLGGGSD+V P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL GKIVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+ D W  +PDLH TH+SAC+G+V+ GK+HVLHKGLSTVQ+ E+ + GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K++ SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR    MTRC G I GC QL I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]
BLAST of CmaCh02G017940 vs. Swiss-Prot
Match: FBK5_ARATH (F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana GN=At1g16250 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-27
Identity = 104/380 (27.37%), Postives = 160/380 (42.11%), Query Frame = 1 

Query: 4   LIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           +I  LPD +ALRC+A++    +  LE VS  W+  +  A+    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWMTIPVLPSKIR--HLARFGAVSTAGKLFVLGG-GSDSVDPLTGD 123
             +N W  YDP  D W  +P   +     H + F  V  +  L V+GG  + SV      
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSF--P 127

Query: 124 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFT-SCRKSISQAE 183
             +   T +V  +DP  ++W   ASM  PR  FAC  + GK+ VAGG   +  + I  AE
Sbjct: 128 HQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAE 187

Query: 184 MYDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGL-----STVQIFENTRPGWRVE 243
           +YDP  D W  LP +       C+G+   G  HVL   +     ++ ++F      W   
Sbjct: 188 VYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTV 247

Query: 244 DYGWLQGPMT-VVQGSLYVMSHGHIF--------------KHDGE-------AKKVIISA 303
           +  W   P +  +Q ++ VM +  ++                +GE          V+ + 
Sbjct: 248 EDVW---PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNH 307

Query: 304 SEFRQRIGFAMMSLRDEIYVIGGDIGPDRLNWDVKPTSDVDI-------LTTGGERP-TW 344
               +  G+   +LR+E+YVIGG +    L W+       DI       +    +RP  W
Sbjct: 308 PRELEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRPLNW 367

[Close]
BLAST of CmaCh02G017940 vs. Swiss-Prot
Match: FBK8_ARATH (F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana GN=At1g22040 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.2e-22
Identity = 67/223 (30.04%), Postives = 109/223 (48.88%), Query Frame = 1 

Query: 4   LIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVC-- 63
           LI  LPD ++++ LAR+P   Y  + LVS  W++A+ ++E+Y +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  AFEPENLWQLYDPLRDLWMTIPVLP----------------SKIRHLARFGAV------- 123
             E + LW   DP+   W  +P +P                + I      GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 -STAGKLFVLGGGSDSVDP---LTGDQDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFA 183
             ++ ++   G    +VD    + G   R+   + VW +DP++  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CCVLDGKIVVAGGFTSCRKSIS---QAEMYDPDKDAWIPLPDL 195
             VL+ K+ V GG    R  +S    AE+YDP  DAW  +P +
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSM 265

[Close]
BLAST of CmaCh02G017940 vs. Swiss-Prot
Match: FBK28_ARATH (F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.2e-20
Identity = 67/214 (31.31%), Postives = 96/214 (44.86%), Query Frame = 1 

Query: 4   LIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           LI  LPD VA +CLA VP   +P +  V   W+  + S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  EP---ENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 123
                +N W++ D L     ++P +P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLVAS 158

Query: 124 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 183
            D       V+ YD  +  WS+ A + V R  FAC  ++G + V GG     +S+S AE+
Sbjct: 159 AD-------VYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVL 215
           YDP+   W  +  L       C      GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRPRW-GCFASAFNGKLYVM 242

[Close]
BLAST of CmaCh02G017940 vs. Swiss-Prot
Match: FK110_ARATH (F-box/kelch-repeat protein At5g03020 OS=Arabidopsis thaliana GN=At5g03020 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.0e-17
Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 1 

Query: 8   LPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCA---FE 67
           LPD VAL C AR+    YP L LVS  ++  I S EL   R  IG  E+ LCVC      
Sbjct: 20  LPDDVALDCRARISRFHYPTLSLVSKGFRTLIASPELEATRSFIGKPENHLCVCLRLYKN 79

Query: 68  PENLWQLYDPL--RDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGDQD 127
           P  LW ++ P+  + L   +P  P++ ++      VS   +++++GG             
Sbjct: 80  PNPLWFIFSPIPKQKLKPIVPWFPNQ-QYPQYPTVVSNGSQIYIIGGFV----------- 139

Query: 128 RNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKS--ISQAEM 187
           R   +N V  +D    +W +   M  PR   A  V+DGKI V GGF     +   +  E+
Sbjct: 140 RRRRSNRVSIFDYRTYQWRRLPKMRQPRVYPAASVIDGKIYVIGGFRGSMPTDIENSGEV 198

Query: 188 YDPDKDAWIPL 192
           YDP  + W P+
Sbjct: 200 YDPKTNTWEPI 198

[Close]
BLAST of CmaCh02G017940 vs. TrEMBL
Match: A0A0A0KDW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410600 PE=4 SV=1)

HSP 1 Score: 629.8 bits (1623), Expect = 2.0e-177
Identity = 298/346 (86.13%), Postives = 319/346 (92.20%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           +++LID LPDAVA +CLARVPFHLYP+LELVSHSWQAAI SAEL+RVRQEIGSSEDLLCV
Sbjct: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAFEPENLWQLYDP+RDLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQ ASML+PRAMFAC VL+GKIVVAGGFTSCRKSISQAEM
Sbjct: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPD D WI LPDLH TH+SACTGVVIGG+LHVLHKG+S VQI ++ R  WRVE+YGW Q
Sbjct: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241

Query: 241 GPMTVVQGSLYVMSHGHIFKHDG-EAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGP 300
           GPM VVQ SLYVM HGHIFKH G E KK +ISASEFRQRIGFAM+SLRDEIYVIGGDIGP
Sbjct: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301

Query: 301 DRLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           DRLNW +KPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

[Close]
BLAST of CmaCh02G017940 vs. TrEMBL
Match: A0A067JC94_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21903 PE=4 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 2.9e-168
Identity = 272/345 (78.84%), Postives = 312/345 (90.43%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELID LPDA+A+RC+ARVPF+L+P+LELVS SW+AAIHS+EL++ R+E+GS+E+LLCV
Sbjct: 1   MSELIDGLPDAIAIRCIARVPFYLHPKLELVSRSWRAAIHSSELFKAREEVGSAEELLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAF+PENLWQLYDPLRDLW+T+PVLPSKIRHLA FG VSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QD +FATNEVWSYDPVIR+W+ CASMLVPRAMFACCVL GKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDGSFATNEVWSYDPVIRQWAPCASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+KD W+P+PDLH TH+SAC+GVVIGGK+HVLHKGLSTVQ+ +N   GW VEDYGWLQ
Sbjct: 181 YDPEKDVWMPIPDLHRTHNSACSGVVIGGKVHVLHKGLSTVQVLDNVASGWTVEDYGWLQ 240

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV G+LYVMSHG I K +G+ +KV++SASEFR+RIGFAM+ L DEIYVIGG IGPD
Sbjct: 241 GPMAVVHGALYVMSHGLICKLEGKMRKVVVSASEFRKRIGFAMIGLGDEIYVIGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           R NW++KP SDVDILT GGERPTWR+A  MTRC G I GC QLRI
Sbjct: 301 RWNWEIKPMSDVDILTFGGERPTWRQAAPMTRCRGTILGCTQLRI 345

[Close]
BLAST of CmaCh02G017940 vs. TrEMBL
Match: B9SFJ2_RICCO (Protein AFR, putative OS=Ricinus communis GN=RCOM_0646580 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 7.8e-166
Identity = 268/345 (77.68%), Postives = 307/345 (88.99%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELI+ LPDA+A+RC+ARVPF+L+P+LELVSHSW++AI S EL++ RQE+GS+EDLLCV
Sbjct: 1   MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T+PVLPSKIRHLA FG VSTAGKL+VLGGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QD NFATNEVWSYDPVIR+W+  ASMLVPRAMFACCVL GKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+KD WIP+PDLH TH+SAC+G+VIGGK+H+LHKGLS VQ+ +N   GW VEDY WLQ
Sbjct: 181 YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV G+LYVMSHG I K +G+ +KV++SASEFR+RIGFAM  L D+IYVIGG IGPD
Sbjct: 241 GPMAVVHGALYVMSHGLICKQEGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           R NWD+KP SDVDIL  GGERPTWR+A  M+RC G I GCAQLRI
Sbjct: 301 RWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345

[Close]
BLAST of CmaCh02G017940 vs. TrEMBL
Match: B9GSL6_POPTR (Kelch repeat-containing F-box family protein OS=Populus trichocarpa GN=POPTR_0002s05150g PE=4 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.3e-165
Identity = 266/345 (77.10%), Postives = 308/345 (89.28%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELI+ LPDAVA+RC+ARVPF+L+P+LE+VS SWQAA+ S EL++ RQE+GS+EDLLCV
Sbjct: 1   MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAF+PENLWQLYDPLRDLW+T+P+LPSKIRHLA FG V +AGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFDPENLWQLYDPLRDLWITLPILPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QD +FATNEVWSYDPV+R W+  ASMLVPRAMFACC L+GKIVVAGGFTSC+KSISQAEM
Sbjct: 121 QDGSFATNEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+KD W+P+PDLH TH+SAC+GVVIGGKLHVLH+GLSTVQ+ ++   GW VEDYGWLQ
Sbjct: 181 YDPEKDVWVPIPDLHRTHNSACSGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQ 240

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV  +LYVMSHG I K +G+ +KV++SASEFR+RIGFAM  L DE+YVIGG IGPD
Sbjct: 241 GPMAVVHDALYVMSHGLIVKQEGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           R NWD+KP SDVDILT GGERPTWR+AT MTRC G IRGCAQLRI
Sbjct: 301 RWNWDIKPVSDVDILTVGGERPTWRQATPMTRCRGTIRGCAQLRI 345

[Close]
BLAST of CmaCh02G017940 vs. TrEMBL
Match: A0A0D2SJL7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G138500 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 6.6e-165
Identity = 267/345 (77.39%), Postives = 306/345 (88.70%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MS LI+ LPDAVALRCLARVPF+LYP+LE+VSHSW+AAI S EL+R RQEIGS+E+LLCV
Sbjct: 1   MSGLIEGLPDAVALRCLARVPFYLYPKLEIVSHSWRAAIRSPELFRARQEIGSTEELLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAF+PENLWQ+YDPLRDLW+T+PVLP+K+RHLA FG VST GKLFVLGGGS+ VDPLTGD
Sbjct: 61  CAFDPENLWQMYDPLRDLWITLPVLPTKVRHLAHFGVVSTGGKLFVLGGGSEDVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QD +FATNEVWSYDPV+RRW+Q ASM++PRAMFACCVL+GKI+VAGGFTSCRKSISQAEM
Sbjct: 121 QDGSFATNEVWSYDPVVRRWAQHASMILPRAMFACCVLEGKIIVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YD +KD WIP+PDLH TH+SACTG+VIGGK+HVLHKGLS VQ+ +N   GW VEDYGWLQ
Sbjct: 181 YDHEKDVWIPIPDLHCTHNSACTGLVIGGKVHVLHKGLSKVQVLDNVCSGWTVEDYGWLQ 240

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VVQG+LYVMSHG IFK + E +KV+ S+SEFR+RIGFAM  +RDEIYVIGG IGPD
Sbjct: 241 GPMAVVQGALYVMSHGLIFKQEKEVRKVVTSSSEFRRRIGFAMTGVRDEIYVIGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           R NWD+KP SDVDILT GG+RPTWR+A  MT C G I GC QLRI
Sbjct: 301 RFNWDIKPMSDVDILTVGGDRPTWRQAAPMTMCRGTIFGCTQLRI 345

[Close]
BLAST of CmaCh02G017940 vs. TAIR10
Match: AT3G63220.2 (AT3G63220.2 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 516.2 bits (1328), Expect = 1.6e-146
Identity = 234/345 (67.83%), Postives = 281/345 (81.45%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MS L+D +P+AVALRCLA VP HL+P LELVS SW+AAI S EL+RVR+E+ SSE LLCV
Sbjct: 8   MSGLLDGIPEAVALRCLAHVPLHLHPNLELVSRSWRAAIRSHELFRVRKELRSSEHLLCV 67

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAF+PEN+WQ+Y P  D W+T+P+LPS+IRHLA FGAV+TAG LFVLGGGSD+V P+TGD
Sbjct: 68  CAFDPENIWQVYSPNCDRWLTLPLLPSRIRHLAHFGAVTTAGMLFVLGGGSDAVSPVTGD 127

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
            D  FAT++VWSYD V R+W+  ASMLVPRAMFACCVL GKIVVAGGFT+CRKSIS AEM
Sbjct: 128 HDGTFATDQVWSYDFVQRQWTPRASMLVPRAMFACCVLQGKIVVAGGFTTCRKSISGAEM 187

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+ D W  +PDLH TH+SAC+G+V+ GK+HVLHKGLSTVQ+ E+ + GW V+DYGW Q
Sbjct: 188 YDPENDVWTSIPDLHQTHNSACSGLVVNGKVHVLHKGLSTVQVLESVKLGWDVKDYGWPQ 247

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV+  LYVMSHG +FK +G+  K++ SASEF++RIG AM SL DE+ ++GG IGPD
Sbjct: 248 GPMVVVEDVLYVMSHGLVFKQEGDTWKMVASASEFKRRIGMAMTSLSDEVLIVGGVIGPD 307

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           RLNWD+KP SDVD LT G +RP WR    MTRC G I GC QL I
Sbjct: 308 RLNWDIKPLSDVDALTVGNDRPAWRSVAPMTRCRGTILGCTQLTI 352

[Close]
BLAST of CmaCh02G017940 vs. TAIR10
Match: AT1G16250.1 (AT1G16250.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 124.8 bits (312), Expect = 1.0e-28
Identity = 104/380 (27.37%), Postives = 160/380 (42.11%), Query Frame = 1 

Query: 4   LIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           +I  LPD +ALRC+A++    +  LE VS  W+  +  A+    +   G S   L V   
Sbjct: 8   IIPGLPDDLALRCIAKLSHGYHGVLECVSRGWRDLVRGADYSCYKARNGWSGSWLFVLTE 67

Query: 64  EPENLWQLYDPLRDLWMTIPVLPSKIR--HLARFGAVSTAGKLFVLGG-GSDSVDPLTGD 123
             +N W  YDP  D W  +P   +     H + F  V  +  L V+GG  + SV      
Sbjct: 68  RSKNQWVAYDPEADRWHPLPRTRAVQDGWHHSGFACVCVSNCLLVIGGCYAPSVSSF--P 127

Query: 124 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFT-SCRKSISQAE 183
             +   T +V  +DP  ++W   ASM  PR  FAC  + GK+ VAGG   +  + I  AE
Sbjct: 128 HQKPVVTKDVMRFDPFKKQWKMVASMRTPRTHFACTSVSGKVYVAGGRNLTHSRGIPSAE 187

Query: 184 MYDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGL-----STVQIFENTRPGWRVE 243
           +YDP  D W  LP +       C+G+   G  HVL   +     ++ ++F      W   
Sbjct: 188 VYDPVADRWEELPAMPRPQMD-CSGLSYRGCFHVLSDQVGFAEQNSSEVFNPRDMTWSTV 247

Query: 244 DYGWLQGPMT-VVQGSLYVMSHGHIF--------------KHDGE-------AKKVIISA 303
           +  W   P +  +Q ++ VM +  ++                +GE          V+ + 
Sbjct: 248 EDVW---PFSRAMQFAVQVMKNDRVYTIVDWGESLIKTRDTDEGEWYNVGSVPSVVLPNH 307

Query: 304 SEFRQRIGFAMMSLRDEIYVIGGDIGPDRLNWDVKPTSDVDI-------LTTGGERP-TW 344
               +  G+   +LR+E+YVIGG +    L W+       DI       +    +RP  W
Sbjct: 308 PRELEAFGYGFAALRNELYVIGGKV----LKWEESGAGRFDIVRLPVVRVCNPLDRPLNW 367

[Close]
BLAST of CmaCh02G017940 vs. TAIR10
Match: AT1G22040.1 (AT1G22040.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 2.9e-23
Identity = 67/223 (30.04%), Postives = 109/223 (48.88%), Query Frame = 1 

Query: 4   LIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVC-- 63
           LI  LPD ++++ LAR+P   Y  + LVS  W++A+ ++E+Y +R+E+G +E+ L V   
Sbjct: 43  LIPSLPDELSIQILARLPRICYSSVRLVSRRWRSAVSTSEVYSLRKELGRTEEWLYVLTK 102

Query: 64  AFEPENLWQLYDPLRDLWMTIPVLP----------------SKIRHLARFGAV------- 123
             E + LW   DP+   W  +P +P                + I      GA+       
Sbjct: 103 GHEDKLLWYALDPVSTKWQRLPPMPVVVYEEESRKSLSGLWNMITPSFNVGAIVRSFLGR 162

Query: 124 -STAGKLFVLGGGSDSVDP---LTGDQDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFA 183
             ++ ++   G    +VD    + G   R+   + VW +DP++  WS+ +SML  RA   
Sbjct: 163 RDSSEQMPFCGCAIGAVDGGLYVIGGLSRSKTVSCVWRFDPILNSWSEVSSMLASRAYSK 222

Query: 184 CCVLDGKIVVAGGFTSCRKSIS---QAEMYDPDKDAWIPLPDL 195
             VL+ K+ V GG    R  +S    AE+YDP  DAW  +P +
Sbjct: 223 TGVLNKKLYVVGGVDRGRGGLSPLQSAEVYDPSTDAWSEVPSM 265

[Close]
BLAST of CmaCh02G017940 vs. TAIR10
Match: AT1G67480.1 (AT1G67480.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-21
Identity = 67/214 (31.31%), Postives = 96/214 (44.86%), Query Frame = 1 

Query: 4   LIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCAF 63
           LI  LPD VA +CLA VP   +P +  V   W+  + S E   VR+  G  E+ L V   
Sbjct: 39  LIPGLPDDVAKQCLALVPRARFPSMGSVCKKWRFVVQSKEFITVRRLAGMLEEWLYVLTM 98

Query: 64  EP---ENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 123
                +N W++ D L     ++P +P   +    F  V   GKL V+ G       L   
Sbjct: 99  NAGGKDNRWEVMDCLGQKLSSLPPMPGPAK--TGFKVVVVDGKLLVIAGCCMINGSLVAS 158

Query: 124 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 183
            D       V+ YD  +  WS+ A + V R  FAC  ++G + V GG     +S+S AE+
Sbjct: 159 AD-------VYQYDTCLNSWSRLADLEVARYDFACAEVNGHVYVVGGHGVDGESLSSAEV 218

Query: 184 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVL 215
           YDP+   W  +  L       C      GKL+V+
Sbjct: 219 YDPETCTWTFIESLRRPRW-GCFASAFNGKLYVM 242

[Close]
BLAST of CmaCh02G017940 vs. TAIR10
Match: AT5G03020.1 (AT5G03020.1 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 1.7e-18
Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 1 

Query: 8   LPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCVCA---FE 67
           LPD VAL C AR+    YP L LVS  ++  I S EL   R  IG  E+ LCVC      
Sbjct: 20  LPDDVALDCRARISRFHYPTLSLVSKGFRTLIASPELEATRSFIGKPENHLCVCLRLYKN 79

Query: 68  PENLWQLYDPL--RDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGDQD 127
           P  LW ++ P+  + L   +P  P++ ++      VS   +++++GG             
Sbjct: 80  PNPLWFIFSPIPKQKLKPIVPWFPNQ-QYPQYPTVVSNGSQIYIIGGFV----------- 139

Query: 128 RNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKS--ISQAEM 187
           R   +N V  +D    +W +   M  PR   A  V+DGKI V GGF     +   +  E+
Sbjct: 140 RRRRSNRVSIFDYRTYQWRRLPKMRQPRVYPAASVIDGKIYVIGGFRGSMPTDIENSGEV 198

Query: 188 YDPDKDAWIPL 192
           YDP  + W P+
Sbjct: 200 YDPKTNTWEPI 198

[Close]
BLAST of CmaCh02G017940 vs. NCBI nr
Match: gi|659097090|ref|XP_008449436.1| (PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis melo])

HSP 1 Score: 630.6 bits (1625), Expect = 1.7e-177
Identity = 299/346 (86.42%), Postives = 321/346 (92.77%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           +++LID LPDAVA +CLARVPFHLYP+LELVSHSWQAAI SAEL+RVRQEIGSSEDLLCV
Sbjct: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAFEPENLWQLYDP+RDLW+TIPVLPSKIRHLA FGAVSTAGKL+VLGGGSD+VDPLTGD
Sbjct: 62  CAFEPENLWQLYDPIRDLWITIPVLPSKIRHLAHFGAVSTAGKLYVLGGGSDAVDPLTGD 121

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQ ASML+PRAMFAC VL+GKIVVAGGFTSCRKSISQAEM
Sbjct: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPDKD WI LPDLH TH+SACTGVVIGG+LHVLHKG+S VQIF++ +  WRVE+YGW Q
Sbjct: 182 YDPDKDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQIFDSLQLEWRVEEYGWPQ 241

Query: 241 GPMTVVQGSLYVMSHGHIFKHDG-EAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGP 300
           GPM VVQ SLYVM HGHIFK+ G E KK +ISASEFRQRIGFAM+SLRDEIYVIGGDIGP
Sbjct: 242 GPMAVVQDSLYVMGHGHIFKYHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301

Query: 301 DRLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           DRLNW VKPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 302 DRLNWHVKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

[Close]
BLAST of CmaCh02G017940 vs. NCBI nr
Match: gi|449444929|ref|XP_004140226.1| (PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis sativus])

HSP 1 Score: 629.8 bits (1623), Expect = 2.8e-177
Identity = 298/346 (86.13%), Postives = 319/346 (92.20%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           +++LID LPDAVA +CLARVPFHLYP+LELVSHSWQAAI SAEL+RVRQEIGSSEDLLCV
Sbjct: 2   LTDLIDGLPDAVAHQCLARVPFHLYPKLELVSHSWQAAIRSAELFRVRQEIGSSEDLLCV 61

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAFEPENLWQLYDP+RDLW+TIPVLPS+IRHLA FGAVSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 62  CAFEPENLWQLYDPIRDLWITIPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 121

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QDRNFATNEVWSYDPVIRRWSQ ASML+PRAMFAC VL+GKIVVAGGFTSCRKSISQAEM
Sbjct: 122 QDRNFATNEVWSYDPVIRRWSQRASMLIPRAMFACGVLEGKIVVAGGFTSCRKSISQAEM 181

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDPD D WI LPDLH TH+SACTGVVIGG+LHVLHKG+S VQI ++ R  WRVE+YGW Q
Sbjct: 182 YDPDSDVWISLPDLHRTHNSACTGVVIGGELHVLHKGISKVQILDSLRLEWRVEEYGWPQ 241

Query: 241 GPMTVVQGSLYVMSHGHIFKHDG-EAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGP 300
           GPM VVQ SLYVM HGHIFKH G E KK +ISASEFRQRIGFAM+SLRDEIYVIGGDIGP
Sbjct: 242 GPMAVVQDSLYVMGHGHIFKHHGREPKKYVISASEFRQRIGFAMISLRDEIYVIGGDIGP 301

Query: 301 DRLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           DRLNW +KPTSDVDILTTGGERPTWR A SMTRC GAIRGCAQLRI
Sbjct: 302 DRLNWHIKPTSDVDILTTGGERPTWRHAASMTRCRGAIRGCAQLRI 347

[Close]
BLAST of CmaCh02G017940 vs. NCBI nr
Match: gi|802790524|ref|XP_012092208.1| (PREDICTED: F-box/kelch-repeat protein SKIP30 [Jatropha curcas])

HSP 1 Score: 599.4 bits (1544), Expect = 4.1e-168
Identity = 272/345 (78.84%), Postives = 312/345 (90.43%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELID LPDA+A+RC+ARVPF+L+P+LELVS SW+AAIHS+EL++ R+E+GS+E+LLCV
Sbjct: 1   MSELIDGLPDAIAIRCIARVPFYLHPKLELVSRSWRAAIHSSELFKAREEVGSAEELLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAF+PENLWQLYDPLRDLW+T+PVLPSKIRHLA FG VSTAGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QD +FATNEVWSYDPVIR+W+ CASMLVPRAMFACCVL GKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDGSFATNEVWSYDPVIRQWAPCASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+KD W+P+PDLH TH+SAC+GVVIGGK+HVLHKGLSTVQ+ +N   GW VEDYGWLQ
Sbjct: 181 YDPEKDVWMPIPDLHRTHNSACSGVVIGGKVHVLHKGLSTVQVLDNVASGWTVEDYGWLQ 240

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV G+LYVMSHG I K +G+ +KV++SASEFR+RIGFAM+ L DEIYVIGG IGPD
Sbjct: 241 GPMAVVHGALYVMSHGLICKLEGKMRKVVVSASEFRKRIGFAMIGLGDEIYVIGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           R NW++KP SDVDILT GGERPTWR+A  MTRC G I GC QLRI
Sbjct: 301 RWNWEIKPMSDVDILTFGGERPTWRQAAPMTRCRGTILGCTQLRI 345

[Close]
BLAST of CmaCh02G017940 vs. NCBI nr
Match: gi|743840191|ref|XP_011026143.1| (PREDICTED: F-box/kelch-repeat protein SKIP30-like [Populus euphratica])

HSP 1 Score: 592.4 bits (1526), Expect = 5.0e-166
Identity = 268/345 (77.68%), Postives = 308/345 (89.28%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELI+ LPDAVA+RC+ARVPF+L+P+LE+VS SWQAA+ S EL++ RQE+GS+EDLLCV
Sbjct: 1   MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAF+PENLWQLYDPLRDLW+T+PVLPSKIRHLA FG V +AGKLFVLGGGSD+VDPLTGD
Sbjct: 61  CAFDPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QD +FATNEVWSYDPV+R W+  ASMLVPRAMFACC L+GKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDGSFATNEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+KD W+P+PDLH TH+SAC+GVV+GGKLHVLH+GLSTVQ+ +N   GW VEDYGWLQ
Sbjct: 181 YDPEKDVWVPIPDLHRTHNSACSGVVMGGKLHVLHRGLSTVQVLDNIGSGWTVEDYGWLQ 240

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV  +LYVMSHG I K +G+ +KV++SASEFR+RIGFAM  L DE+YVIGG IGPD
Sbjct: 241 GPMAVVHDALYVMSHGLIVKQEGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           R NWD+KP SDVDILT GGERPTWR+AT MTRC G IRGCAQLRI
Sbjct: 301 RWNWDIKPVSDVDILTVGGERPTWRQATPMTRCRGTIRGCAQLRI 345

[Close]
BLAST of CmaCh02G017940 vs. NCBI nr
Match: gi|255567564|ref|XP_002524761.1| (PREDICTED: F-box/kelch-repeat protein SKIP30 [Ricinus communis])

HSP 1 Score: 591.3 bits (1523), Expect = 1.1e-165
Identity = 268/345 (77.68%), Postives = 307/345 (88.99%), Query Frame = 1 

Query: 1   MSELIDRLPDAVALRCLARVPFHLYPQLELVSHSWQAAIHSAELYRVRQEIGSSEDLLCV 60
           MSELI+ LPDA+A+RC+ARVPF+L+P+LELVSHSW++AI S EL++ RQE+GS+EDLLCV
Sbjct: 1   MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 61  CAFEPENLWQLYDPLRDLWMTIPVLPSKIRHLARFGAVSTAGKLFVLGGGSDSVDPLTGD 120
           CAFEPENLWQLYDPLRDLW+T+PVLPSKIRHLA FG VSTAGKL+VLGGGSD+VDPLTGD
Sbjct: 61  CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 121 QDRNFATNEVWSYDPVIRRWSQCASMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEM 180
           QD NFATNEVWSYDPVIR+W+  ASMLVPRAMFACCVL GKIVVAGGFTSCRKSISQAEM
Sbjct: 121 QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 181 YDPDKDAWIPLPDLHHTHHSACTGVVIGGKLHVLHKGLSTVQIFENTRPGWRVEDYGWLQ 240
           YDP+KD WIP+PDLH TH+SAC+G+VIGGK+H+LHKGLS VQ+ +N   GW VEDY WLQ
Sbjct: 181 YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 241 GPMTVVQGSLYVMSHGHIFKHDGEAKKVIISASEFRQRIGFAMMSLRDEIYVIGGDIGPD 300
           GPM VV G+LYVMSHG I K +G+ +KV++SASEFR+RIGFAM  L D+IYVIGG IGPD
Sbjct: 241 GPMAVVHGALYVMSHGLICKQEGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIGPD 300

Query: 301 RLNWDVKPTSDVDILTTGGERPTWRRATSMTRCHGAIRGCAQLRI 346
           R NWD+KP SDVDIL  GGERPTWR+A  M+RC G I GCAQLRI
Sbjct: 301 RWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345

The following BLAST results are available for this feature:
BLAST of CmaCh02G017940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKI30_ARATH2.9e-14567.83F-box/kelch-repeat protein SKIP30 OS=Arabidopsis thaliana GN=SKIP30 PE=1 SV=2[more]
FBK5_ARATH1.8e-2727.37F-box/kelch-repeat protein At1g16250 OS=Arabidopsis thaliana GN=At1g16250 PE=2 S... [more]
FBK8_ARATH5.2e-2230.04F-box/kelch-repeat protein At1g22040 OS=Arabidopsis thaliana GN=At1g22040 PE=2 S... [more]
FBK28_ARATH2.2e-2031.31F-box/kelch-repeat protein At1g67480 OS=Arabidopsis thaliana GN=At1g67480 PE=2 S... [more]
FK110_ARATH3.0e-1732.46F-box/kelch-repeat protein At5g03020 OS=Arabidopsis thaliana GN=At5g03020 PE=2 S... [more]
BLAST of CmaCh02G017940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDW8_CUCSA2.0e-17786.13Uncharacterized protein OS=Cucumis sativus GN=Csa_6G410600 PE=4 SV=1[more]
A0A067JC94_JATCU2.9e-16878.84Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21903 PE=4 SV=1[more]
B9SFJ2_RICCO7.8e-16677.68Protein AFR, putative OS=Ricinus communis GN=RCOM_0646580 PE=4 SV=1[more]
B9GSL6_POPTR2.3e-16577.10Kelch repeat-containing F-box family protein OS=Populus trichocarpa GN=POPTR_000... [more]
A0A0D2SJL7_GOSRA6.6e-16577.39Uncharacterized protein OS=Gossypium raimondii GN=B456_007G138500 PE=4 SV=1[more]
BLAST of CmaCh02G017940 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G63220.21.6e-14667.83 Galactose oxidase/kelch repeat superfamily protein[more]
AT1G16250.11.0e-2827.37 Galactose oxidase/kelch repeat superfamily protein[more]
AT1G22040.12.9e-2330.04 Galactose oxidase/kelch repeat superfamily protein[more]
AT1G67480.11.2e-2131.31 Galactose oxidase/kelch repeat superfamily protein[more]
AT5G03020.11.7e-1832.46 Galactose oxidase/kelch repeat superfamily protein[more]
BLAST of CmaCh02G017940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097090|ref|XP_008449436.1|1.7e-17786.42PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis melo][more]
gi|449444929|ref|XP_004140226.1|2.8e-17786.13PREDICTED: F-box/kelch-repeat protein SKIP30 [Cucumis sativus][more]
gi|802790524|ref|XP_012092208.1|4.1e-16878.84PREDICTED: F-box/kelch-repeat protein SKIP30 [Jatropha curcas][more]
gi|743840191|ref|XP_011026143.1|5.0e-16677.68PREDICTED: F-box/kelch-repeat protein SKIP30-like [Populus euphratica][more]
gi|255567564|ref|XP_002524761.1|1.1e-16577.68PREDICTED: F-box/kelch-repeat protein SKIP30 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR015916Galactose oxidase, beta-propeller
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009062 fatty acid catabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G017940.1CmaCh02G017940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 149..194
score: 9.8E-12coord: 93..146
score: 7.0E-9coord: 278..330
score: 8.
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 161..209
score: 4.0E-6coord: 103..160
score: 4.
IPR015916Galactose oxidase, beta-propellerGENE3DG3DSA:2.130.10.80coord: 30..333
score: 2.3
NoneNo IPR availablePANTHERPTHR24414FAMILY NOT NAMEDcoord: 1..345
score: 9.9E
NoneNo IPR availablePANTHERPTHR24414:SF29SEGMENTATION PROTEIN CAP'N'COLLARcoord: 1..345
score: 9.9E
NoneNo IPR availableunknownSSF117281Kelch motifcoord: 61..329
score: 5.75

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh02G017940Cla006046Watermelon (97103) v1cmawmB558
CmaCh02G017940Csa6G410600Cucumber (Chinese Long) v2cmacuB637
CmaCh02G017940ClCG07G000360Watermelon (Charleston Gray)cmawcgB568
CmaCh02G017940CmoCh19G000290Cucurbita moschata (Rifu)cmacmoB595
CmaCh02G017940CmoCh02G018400Cucurbita moschata (Rifu)cmacmoB619
CmaCh02G017940Lsi05G009430Bottle gourd (USVL1VR-Ls)cmalsiB585
CmaCh02G017940Cp4.1LG15g00300Cucurbita pepo (Zucchini)cmacpeB615
CmaCh02G017940Cp4.1LG05g01620Cucurbita pepo (Zucchini)cmacpeB647
CmaCh02G017940MELO3C014395.2Melon (DHL92) v3.6.1cmamedB659
CmaCh02G017940CsaV3_7G027930Cucumber (Chinese Long) v3cmacucB0767
CmaCh02G017940CsaV3_6G037180Cucumber (Chinese Long) v3cmacucB0761
CmaCh02G017940Cla97C09G169830Watermelon (97103) v2cmawmbB665
CmaCh02G017940Cla97C07G128620Watermelon (97103) v2cmawmbB657
CmaCh02G017940Bhi05G000231Wax gourdcmawgoB0730
CmaCh02G017940CsGy6G021350Cucumber (Gy14) v2cgybcmaB828
CmaCh02G017940Carg16834Silver-seed gourdcarcmaB1051
CmaCh02G017940Carg28056Silver-seed gourdcarcmaB0823
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh02G017940Silver-seed gourdcarcmaB1050
CmaCh02G017940Cucumber (Chinese Long) v3cmacucB0750
CmaCh02G017940Cucurbita maxima (Rimu)cmacmaB447
CmaCh02G017940Cucurbita maxima (Rimu)cmacmaB450
CmaCh02G017940Cucurbita maxima (Rimu)cmacmaB512
CmaCh02G017940Cucurbita moschata (Rifu)cmacmoB598
CmaCh02G017940Wild cucumber (PI 183967)cmacpiB632
CmaCh02G017940Cucumber (Chinese Long) v2cmacuB628
CmaCh02G017940Melon (DHL92) v3.5.1cmameB575
CmaCh02G017940Cucurbita pepo (Zucchini)cmacpeB611
CmaCh02G017940Cucumber (Gy14) v2cgybcmaB818
CmaCh02G017940Melon (DHL92) v3.6.1cmamedB658