CmaCh02G016220 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGACTATTTGGGCCTCTAGTTACTGGTCTTTCTTCAGTAGTCCGCGCCCGAACCCGAAGTAGCTCCCGCCTCTCCAAGTCGCTGATCGCACGACGCTCTCTCTGTCGCTGATCGCACAACCCTCTCTCTGTCGCAGTTCTCATCCTCTTTCTCCGCAGTCGCCAACTCCACGATTTTCCTCAGAGTAATTCAATTCTTTCTCTCTTATCTTCATTAATATGGTTCCCAATTGATTCATCAATTTTGATTGTATAATTTTGTTGAAATCATCAAGATCTACAGAGATTAACTTCGTATTTTCCCTTCAGAATTCAGAAACGAACCCTGAGATTTGTGTCTGTTATTATTTCCTGCATTTTCTTAATTGGTATCCCAGTCGGCAACACCATTGACTGTTTAGCAACGCCGTTTGGTTATTTAGATTTGCATTTTAGTCGGCCAATTTTTGTTATTCCAATTTCGGAGACTCTCCGGAGTGATTTCATTCTGCGCACTATATGCTCTCTTCGTATACATAGGATAATGCGGTTAATGTGGGTCGTAATCACCACAATTTGTTACTGGTTACTTAGATTTATGCTATTGATTTTCAACTTTCATGTTATGGTTCTCTTTAAAGAGTTTTATGTTCTGATGATTTTATCTGATGGAACGCGAAGTCTGAATTAGTTTGATGACTCTGGTGAAGTCTGGAGTAGATCCGTTCTGGTTATAACACCTTGAGTACCCCCCTTAGCATGAATGCTGTCTTTTTAGTAAAATTATAATGTGAAGCGAGTTTAGTGCTGGATTGATTGGATTTTAATGTAGTTAATTTGAAATGTGTCTTCATTTCTTAGATTTGGGATTCTTCTTTTTGCTGCTGAAAAAGTGATTGCTTATTGCAATCTGCATCATGATGAAGTCTGAAGTTCTTTCTATGCAGCATCATAGATCTTTCAGTGGAATGAAAAAACTAGAGATTGTTTCTGCATATATTATATAATTGGTAGAGTTTCCTTGAGTTAAAAACTCATTCCATATATTTGTGAATTTTAGTTTATGGGCTTGATGTTGAGAGATTGATTGGAAATCTGCTAGTTTTGTTTACATGAGTTTTTCTTTTTTTCTTTTCTGTTGATAGTTTCATTGTCAAATGTCAATTTGAATACAAATTTGATTTGGGCTTTATCTCAAGATGATATTCTTTGTGTTTATATATATATATTTGCATGAAGAATTGTTGTTAATGTCAAAACTAAATGTGTTACAGATGTTTGACGATCGAGATCTGGGCTTCTTTGCAAATTTTCTGGGGATCTTTATATTTGTATTGGTAATAGCATTTCACTATGTGATGGCTGATCCAAAGTATGAGGGCAACTAAACCATCTCCTCCAATTTTCTTCTCCATGGAATGTATTGGTCGAGGTGAAGACGTTTTTGCAGATATTTTAGCAATTTTATAATAATAACTTTAAGTTAGCACTTTGTCTTTCAAAACAATGCAAGGATATTGTTAATTCTAAGCTTTTTATTGCTTAGTTGGTTCTAAGCTTTTTATCCCTTACCCATCATTTTTATTGAAATTTGTATGTGTTCTTCAATTTTCTATCAATTTAATAGGTAATTGACGTGGC ATGAGACTATTTGGGCCTCTAGTTACTGGTCTTTCTTCAGTAGTCCGCGCCCGAACCCGAATCGCCAACTCCACGATTTTCCTCAGAATGTTTGACGATCGAGATCTGGGCTTCTTTGCAAATTTTCTGGGGATCTTTATATTTGTATTGGTAATAGCATTTCACTATGTGATGGCTGATCCAAAGTATGAGGGCAACTAAACCATCTCCTCCAATTTTCTTCTCCATGGAATGTATTGGTCGAGGTGAAGACGTTTTTGCAGATATTTTAGCAATTTTATAATAATAACTTTAAGTTAGCACTTTGTCTTTCAAAACAATGCAAGGATATTGTTAATTCTAAGCTTTTTATTGCTTAGTTGGTTCTAAGCTTTTTATCCCTTACCCATCATTTTTATTGAAATTTGTATGTGTTCTTCAATTTTCTATCAATTTAATAGGTAATTGACGTGGC ATGAGACTATTTGGGCCTCTAGTTACTGGTCTTTCTTCAGTAGTCCGCGCCCGAACCCGAATCGCCAACTCCACGATTTTCCTCAGAATGTTTGACGATCGAGATCTGGGCTTCTTTGCAAATTTTCTGGGGATCTTTATATTTGTATTGGTAATAGCATTTCACTATGTGATGGCTGATCCAAAGTATGAGGGCAACTAA MRLFGPLVTGLSSVVRARTRIANSTIFLRMFDDRDLGFFANFLGIFIFVLVIAFHYVMADPKYEGN
BLAST of CmaCh02G016220 vs. Swiss-Prot
Match: OST4A_ORYSJ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Oryza sativa subsp. japonica GN=OST4A PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.9e-13 Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. Swiss-Prot
Match: OST4B_ORYSJ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Oryza sativa subsp. japonica GN=OST4B PE=3 SV=2) HSP 1 Score: 71.2 bits (173), Expect = 4.6e-12 Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 1
BLAST of CmaCh02G016220 vs. Swiss-Prot
Match: OST4C_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4C OS=Arabidopsis thaliana GN=OST4C PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.0e-11 Identity = 30/35 (85.71%), Postives = 35/35 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. Swiss-Prot
Match: OST4B_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B OS=Arabidopsis thaliana GN=OST4B PE=3 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-10 Identity = 27/35 (77.14%), Postives = 35/35 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. Swiss-Prot
Match: OST4A_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A OS=Arabidopsis thaliana GN=OST4A PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 9.7e-10 Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 1
BLAST of CmaCh02G016220 vs. TrEMBL
Match: A0A0E0EEG8_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.5e-12 Identity = 37/51 (72.55%), Postives = 44/51 (86.27%), Query Frame = 1
BLAST of CmaCh02G016220 vs. TrEMBL
Match: U5FZG4_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0010s21410g PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-12 Identity = 35/38 (92.11%), Postives = 38/38 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. TrEMBL
Match: A0A0N7KNV7_ORYSJ (Os07g0620500 protein OS=Oryza sativa subsp. japonica GN=Os07g0620500 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.5e-12 Identity = 35/39 (89.74%), Postives = 39/39 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. TrEMBL
Match: B8B8M1_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26901 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 5.5e-12 Identity = 35/39 (89.74%), Postives = 39/39 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. TrEMBL
Match: A9PDB3_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 7.2e-12 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. TAIR10
Match: AT5G02502.1 (AT5G02502.1 Oligosaccaryltransferase) HSP 1 Score: 64.7 bits (156), Expect = 2.4e-11 Identity = 27/35 (77.14%), Postives = 35/35 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. TAIR10
Match: AT3G12587.1 (AT3G12587.1 Oligosaccaryltransferase) HSP 1 Score: 63.5 bits (153), Expect = 5.5e-11 Identity = 29/35 (82.86%), Postives = 31/35 (88.57%), Query Frame = 1
BLAST of CmaCh02G016220 vs. NCBI nr
Match: gi|297740396|emb|CBI30578.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 79.0 bits (193), Expect = 3.6e-12 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. NCBI nr
Match: gi|659132055|ref|XP_008465992.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Cucumis melo]) HSP 1 Score: 78.6 bits (192), Expect = 4.6e-12 Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. NCBI nr
Match: gi|566192018|ref|XP_006378723.1| (hypothetical protein POPTR_0010s21410g, partial [Populus trichocarpa]) HSP 1 Score: 78.6 bits (192), Expect = 4.6e-12 Identity = 35/38 (92.11%), Postives = 38/38 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. NCBI nr
Match: gi|218200034|gb|EEC82461.1| (hypothetical protein OsI_26901 [Oryza sativa Indica Group]) HSP 1 Score: 77.8 bits (190), Expect = 7.9e-12 Identity = 35/39 (89.74%), Postives = 39/39 (100.00%), Query Frame = 1
BLAST of CmaCh02G016220 vs. NCBI nr
Match: gi|225440316|ref|XP_002263329.1| (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4A [Vitis vinifera]) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-11 Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |