CmaCh02G013520 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G013520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_24
Location	Cma_Chr02 : 7894696 .. 7896021 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGAACCCTAAGTCGTACCGGAAGGGGAAACTTACAGAGAAGTCGTCGTCGTTCCACGGCGAGAGACCGACGAAGACTGCGGCGACGCTTCGGCGGCCGAAAACGGATCCGGAGTTATTGTCGTTCAAGAAACTAGGTTTATCGGCGCCGTCGCTGGATGGACGGCCGAAGATGACGAAGTTACTTTTCAACGTGACGATTCAGGGCAGTCTAGGTCCAGTACAAGTGTTGATGTCGCCGGATATGACCGTCGCCGATCTTGTGGCTGCGACCGTACGCCAATACTTGAAGGAAGCCCGCCGACCAATTCTGCCGACTGCAGATCCCTCCGCCTTTGACCTCCATTATTCACAATTCAGCTTAGAAAGTAAGGAATCGATCATAAACCTCGCAACCGCATTTGATTTTGATTGATTTTTTAATCTAATATGAATTTCGCGGGCGATTCTAACGAGGTAATGATCTGAATCTCAGGTTTGAATGAGGATGAGAAGCTAATCGCCTTGGGATCTAGAAACTTCTTTCTGTGCCCTAGAAAATCGGAGGATAACGACGATTTAGTAGCTTCTTCATCGTCGTCGTCCTGCTCGACACAGGCCAAAGAAAACGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGAATTCCGGATTTAGTTACCGCCATAAATCGAATCGATTTCCTTCATACCTTCAATCCGCCTCTGTGAAAAATAGTCTTCAAATTCTCTACGCCATATAAGTAATCCTCGAATCATCTCCACTTCGTAAAAGTTATTAAGCAATCTGCAATTGCTTGGTGCGATTAATATCAGAATTCGATCGAGCAACAGAGAGGGAATATTTCTACAATTCTGTTCTTCGCTTGCTTTCTCAGGATCGACACGGAAATTTATCAGTATTCAATATGTACAGAATATAGATTTCAGAGATCCGCTAGCTTAATTTAGAGCTGGAAACTAAAATTTTCCAGTGAAAATTGTGCTGAATTCAATTGTGTGGCCTGAGATGTTCAGCCTTTTCACAAATCATTTTCTCAGATTCTGAAACTTCCATATCACGGAACAGAGTCGCAGCAGGAAAAATCCCGATATTCCGTGTGAGTTTTGGATGCTTCGTGAAAGAAATTGGTGATGAAAGGGCAAAACATGGTCTACTTGAAATAGCTGAAAGAGACGTTTCCCTGCAAGTTCAATGTTCATACGGACTCTTCAGATATTCCCCCATCATTTACTATATTATTTCATTTTTATCCTATAAATCCATTTATGCATTTAATTCTTTTTTAAATAAATAAATATTACACTCGATTTTGATT

mRNA sequence

ATGCCGAACCCTAAGTCGTACCGGAAGGGGAAACTTACAGAGAAGTCGTCGTCGTTCCACGGCGAGAGACCGACGAAGACTGCGGCGACGCTTCGGCGGCCGAAAACGGATCCGGAGTTATTGTCGTTCAAGAAACTAGGTTTATCGGCGCCGTCGCTGGATGGACGGCCGAAGATGACGAAGTTACTTTTCAACGTGACGATTCAGGGCAGTCTAGGTCCAGTACAAGTGTTGATGTCGCCGGATATGACCGTCGCCGATCTTGTGGCTGCGACCGTACGCCAATACTTGAAGGAAGCCCGCCGACCAATTCTGCCGACTGCAGATCCCTCCGCCTTTGACCTCCATTATTCACAATTCAGCTTAGAAAGTTTGAATGAGGATGAGAAGCTAATCGCCTTGGGATCTAGAAACTTCTTTCTGTGCCCTAGAAAATCGGAGGATAACGACGATTTAGTAGCTTCTTCATCGTCGTCGTCCTGCTCGACACAGGCCAAAGAAAACGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGAATTCCGGATTTAGTTACCGCCATAAATCGAATCGATTTCCTTCATACCTTCAATCCGCCTCTGTGAAAAATAGTCTTCAAATTCTCTACGCCATATAAGTAATCCTCGAATCATCTCCACTTCGTAAAAGTTATTAAGCAATCTGCAATTGCTTGGTGCGATTAATATCAGAATTCGATCGAGCAACAGAGAGGGAATATTTCTACAATTCTGTTCTTCGCTTGCTTTCTCAGGATCGACACGGAAATTTATCAGTATTCAATATGTACAGAATATAGATTTCAGAGATCCGCTAGCTTAATTTAGAGCTGGAAACTAAAATTTTCCAGTGAAAATTGTGCTGAATTCAATTGTGTGGCCTGAGATGTTCAGCCTTTTCACAAATCATTTTCTCAGATTCTGAAACTTCCATATCACGGAACAGAGTCGCAGCAGGAAAAATCCCGATATTCCGTGTGAGTTTTGGATGCTTCGTGAAAGAAATTGGTGATGAAAGGGCAAAACATGGTCTACTTGAAATAGCTGAAAGAGACGTTTCCCTGCAAGTTCAATGTTCATACGGACTCTTCAGATATTCCCCCATCATTTACTATATTATTTCATTTTTATCCTATAAATCCATTTATGCATTTAATTCTTTTTTAAATAAATAAATATTACACTCGATTTTGATT

Coding sequence (CDS)

ATGCCGAACCCTAAGTCGTACCGGAAGGGGAAACTTACAGAGAAGTCGTCGTCGTTCCACGGCGAGAGACCGACGAAGACTGCGGCGACGCTTCGGCGGCCGAAAACGGATCCGGAGTTATTGTCGTTCAAGAAACTAGGTTTATCGGCGCCGTCGCTGGATGGACGGCCGAAGATGACGAAGTTACTTTTCAACGTGACGATTCAGGGCAGTCTAGGTCCAGTACAAGTGTTGATGTCGCCGGATATGACCGTCGCCGATCTTGTGGCTGCGACCGTACGCCAATACTTGAAGGAAGCCCGCCGACCAATTCTGCCGACTGCAGATCCCTCCGCCTTTGACCTCCATTATTCACAATTCAGCTTAGAAAGTTTGAATGAGGATGAGAAGCTAATCGCCTTGGGATCTAGAAACTTCTTTCTGTGCCCTAGAAAATCGGAGGATAACGACGATTTAGTAGCTTCTTCATCGTCGTCGTCCTGCTCGACACAGGCCAAAGAAAACGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGAATTCCGGATTTAG

Protein sequence

MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSAPSLDGRPKMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWFKFIEFRI

Homology

[Close]

BLAST of CmaCh02G013520 vs. Swiss-Prot
Match: Y4276_ARATH (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana GN=At4g22758 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 1


Query: 22  ERPTKTAATLRRPKTD-----PELLSFKKLGLSAP-SLDGRPKMT-KLLFNVTIQGSLGP 81
           E  TK    L R +++     P LL+      S+P + +G  K   K++ +V ++GS GP
Sbjct: 77  EEETKPIVYLPRIRSEVFASSPSLLNLYSPSSSSPINQEGNTKEAPKVIISVAVEGSPGP 136

Query: 82  VQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESLNEDEKLIAL 141
           V+ ++     V + +   V +Y KE R P L     SAF+LH S FS++ L + E +  L
Sbjct: 137 VRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDR--DSAFELHQSHFSIQCLEKREIIGEL 196

Query: 142 GSRNFFLCPRKSE 148
           GSR+F++  +  E
Sbjct: 197 GSRSFYMRKKAPE 207

[Close]

BLAST of CmaCh02G013520 vs. TrEMBL
Match: A0A0A0KES9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G150560 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 1.7e-82
Identity = 163/187 (87.17%), Postives = 176/187 (94.12%), Query Frame = 1


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSA--PSLDGRPK 60
           MPNP+S+RKGKL EKSSSFHGE  TKTA  LRRPKTDPELLSFK LGLSA  PSLDGRPK
Sbjct: 1   MPNPRSHRKGKLAEKSSSFHGESSTKTATMLRRPKTDPELLSFKNLGLSASAPSLDGRPK 60

Query: 61  MTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYS 120
           MTKLL NVTIQGSLGPVQVLMSP+MTVADLV+ATVRQYLKE RRPILPTADPSAFDLHYS
Sbjct: 61  MTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYS 120

Query: 121 QFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWF 180
           QFSLESLN++EKLIALGSRNFFLCP+KS+DN+DL+ASSSSSSCS +AKE+AKSSSSFSWF
Sbjct: 121 QFSLESLNKEEKLIALGSRNFFLCPKKSDDNNDLIASSSSSSCSKEAKESAKSSSSFSWF 180

Query: 181 KFIEFRI 186
           KFI+FRI
Sbjct: 181 KFIDFRI 187

[Close]

BLAST of CmaCh02G013520 vs. TrEMBL
Match: A0A061GUN7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_041515 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-44
Identity = 105/180 (58.33%), Postives = 131/180 (72.78%), Query Frame = 1


Query: 4   PKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSAPSLDGRPKMTKLL 63
           P+  R+G+L+EK+SSFHG  PT   A LRRPKT P+LLS + + +S    D RPK+TKLL
Sbjct: 11  PEKNRRGRLSEKASSFHGRIPTIAPAELRRPKTLPDLLSERTISISQ---DARPKLTKLL 70

Query: 64  FNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLE 123
            NVTIQGSLG VQVLMSP+ TV DL+ A VRQY KE RRPILP+ + S FDLHYSQFSLE
Sbjct: 71  LNVTIQGSLGAVQVLMSPENTVGDLINAAVRQYSKEGRRPILPSTNASLFDLHYSQFSLE 130

Query: 124 SLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWFKFIEF 183
            L  +EKL+ALGSRNFFLC +K+   D    +S ++SCS +A++  K  S   W KF++F
Sbjct: 131 RLEREEKLMALGSRNFFLCTKKAASKDG--ENSETTSCSKEAEKVTK--SVIPWLKFMDF 183

[Close]

BLAST of CmaCh02G013520 vs. TrEMBL
Match: A5C200_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009604 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 5.8e-43
Identity = 105/183 (57.38%), Postives = 134/183 (73.22%), Query Frame = 1


Query: 8   RKGKLTEKSSSFHGERPTKTA--ATLRRPKTDPELLSFKKLGLSAPSLDGRPKMTKLLFN 67
           RKG+L ++SSSFH   P   A  A LRRPKT P+LLS ++  +S  S +G P++TKLL N
Sbjct: 16  RKGRLAQRSSSFHSGIPMTMAPQAELRRPKTLPDLLSGRR-SVSGLSPEGGPRLTKLLLN 75

Query: 68  VTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESL 127
           VT+Q SLGPVQV+MSPD TV DL+AA +RQY KE RR +LPT DP+ FDLHYSQFSLESL
Sbjct: 76  VTVQRSLGPVQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESL 135

Query: 128 NEDEKLIALGSRNFFLCPRKSEDN-----DDLVASSSSSSCSTQAKENAKSSSSFSWFKF 184
           + +EKL+ LGSRNFFLC +KSE +      +   ++SSS+CST+A + +K   S  W KF
Sbjct: 136 DRNEKLMTLGSRNFFLCCKKSEPDVGESAXEASETTSSSTCSTEADKVSK--ISVPWLKF 195

[Close]

BLAST of CmaCh02G013520 vs. TrEMBL
Match: F6GW54_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g01250 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-42
Identity = 104/183 (56.83%), Postives = 133/183 (72.68%), Query Frame = 1


Query: 8   RKGKLTEKSSSFHGERPTKTA--ATLRRPKTDPELLSFKKLGLSAPSLDGRPKMTKLLFN 67
           RKG+L ++SSSFH   P   A  A LRRPKT P+LLS + +   +P  +G P++TKLL N
Sbjct: 16  RKGRLAQRSSSFHSGIPMTMAPQAELRRPKTLPDLLSGRSVSGLSP--EGGPRLTKLLLN 75

Query: 68  VTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESL 127
           VT+Q SLGPVQV+MSPD TV DL+AA +RQY KE RR +LPT DP+ FDLHYSQFSLESL
Sbjct: 76  VTVQRSLGPVQVVMSPDSTVGDLIAAVLRQYAKEGRRLVLPTTDPAGFDLHYSQFSLESL 135

Query: 128 NEDEKLIALGSRNFFLCPRKSEDN-----DDLVASSSSSSCSTQAKENAKSSSSFSWFKF 184
           + +EKL+ LGSRNFFLC +KSE +      +   ++SSS+CST+A + +K   S  W KF
Sbjct: 136 DRNEKLMTLGSRNFFLCCKKSEPDVGESAAEASETTSSSTCSTEADKVSK--ISVPWLKF 194

[Close]

BLAST of CmaCh02G013520 vs. TrEMBL
Match: A0A0D2N274_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G119300 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.9e-42
Identity = 106/190 (55.79%), Postives = 127/190 (66.84%), Query Frame = 1


Query: 1   MPNPKSYRK-------GKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSAPSL 60
           MPN K+ RK       GKL+EK+SSFHG+ PT   + LRRPKT P+L S +   +     
Sbjct: 1   MPNSKNNRKEQEKNRKGKLSEKASSFHGKFPTVAPSDLRRPKTLPDLFSERTTSVLP--- 60

Query: 61  DGRPKMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAF 120
           D RPK+TKLL NVTIQGSLG VQV++SP+ TV DL+ A VRQY KE RRPILP+ D S  
Sbjct: 61  DARPKLTKLLLNVTIQGSLGAVQVVLSPENTVGDLITAAVRQYSKEGRRPILPSTDASLL 120

Query: 121 DLHYSQFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSS 180
           DLHYSQFSLESL   EKL+ALGSRNFFLC +K+   D     + +SSCS +A E    S 
Sbjct: 121 DLHYSQFSLESLERGEKLMALGSRNFFLCTKKAASKD---GDNPTSSCSKEA-EKVTKSV 180

Query: 181 SFSWFKFIEF 184
              W KF+ F
Sbjct: 181 IIPWLKFMNF 183

[Close]

BLAST of CmaCh02G013520 vs. TAIR10
Match: AT2G27830.1 (AT2G27830.1 unknown protein)

HSP 1 Score: 171.0 bits (432), Expect = 6.8e-43
Identity = 100/181 (55.25%), Postives = 127/181 (70.17%), Query Frame = 1


Query: 5   KSYRKGKLTEKSSSFHGE--RPTKTAATLRRPKTDPELLSFKKLGLSAPSLDGRPKMTKL 64
           KS+R+ KL+EK+ SFHG    P      LRRPKT PEL S  +      ++   P++TKL
Sbjct: 14  KSHRR-KLSEKAMSFHGRGTTPLSNPGELRRPKTLPELFSTGQSITVPETVSLPPRLTKL 73

Query: 65  LFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSL 124
           L NVT+QGSLG VQ+++SP+ TV+DL+ A VRQY+KEARRP LP ++PS FDLHYSQFSL
Sbjct: 74  LLNVTVQGSLGAVQIIISPESTVSDLIDAAVRQYVKEARRPFLPESEPSRFDLHYSQFSL 133

Query: 125 ESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWFKFIE 184
           ES+  DEKLI+LGSRNFFLC RK E    +    SS SCS +A++ AK  + F W KF+ 
Sbjct: 134 ESIVRDEKLISLGSRNFFLCGRK-ETGGFIGCGLSSESCSKEAEKVAK--TGFHWLKFMG 190

[Close]

BLAST of CmaCh02G013520 vs. TAIR10
Match: AT4G22758.1 (AT4G22758.1 unknown protein)

HSP 1 Score: 60.1 bits (144), Expect = 1.7e-09
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 1


Query: 22  ERPTKTAATLRRPKTD-----PELLSFKKLGLSAP-SLDGRPKMT-KLLFNVTIQGSLGP 81
           E  TK    L R +++     P LL+      S+P + +G  K   K++ +V ++GS GP
Sbjct: 77  EEETKPIVYLPRIRSEVFASSPSLLNLYSPSSSSPINQEGNTKEAPKVIISVAVEGSPGP 136

Query: 82  VQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLESLNEDEKLIAL 141
           V+ ++     V + +   V +Y KE R P L     SAF+LH S FS++ L + E +  L
Sbjct: 137 VRAMVKLSCNVEETIKIVVDKYCKEGRTPKLDR--DSAFELHQSHFSIQCLEKREIIGEL 196

Query: 142 GSRNFFLCPRKSE 148
           GSR+F++  +  E
Sbjct: 197 GSRSFYMRKKAPE 207

[Close]

BLAST of CmaCh02G013520 vs. TAIR10
Match: AT1G70780.1 (AT1G70780.1 unknown protein)

HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06
Identity = 36/106 (33.96%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 58  KMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHY 117
           K  ++L +VT+ GS GP++ +   D  VA ++   ++ Y +E R P+L + D + F L+ 
Sbjct: 14  KGNRILISVTVLGSAGPIRFVAYEDDLVASVIDTALKGYAREGRLPLLGS-DFNDFLLYC 73

Query: 118 SQFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCST 164
                E+L+  + + +LG+RNF LC RK E+    V  S+  S ST
Sbjct: 74  PMVGPEALSTWDAIGSLGARNFMLC-RKPEEKK--VEESNGRSDST 115

[Close]

BLAST of CmaCh02G013520 vs. TAIR10
Match: AT5G37730.1 (AT5G37730.1 unknown protein)

HSP 1 Score: 47.8 bits (112), Expect = 8.7e-06
Identity = 25/88 (28.41%), Postives = 47/88 (53.41%), Query Frame = 1


Query: 58  KMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHY 117
           K  KLL +V + GS+GP++ L + D  V+  +  T++ Y ++ R P+L   D   F  + 
Sbjct: 14  KNKKLLVSVNVLGSVGPIRFLANEDDEVSSAINTTLKAYARQGRIPVL-GFDVDNFIFYS 73

Query: 118 SQFSLESLNEDEKLIALGSRNFFLCPRK 146
                 +L+  EK+ ++   NF +C ++
Sbjct: 74  INAGFNTLHPQEKIGSMDVTNFLMCKKE 100

[Close]

BLAST of CmaCh02G013520 vs. NCBI nr
Match: gi|449456088|ref|XP_004145782.1| (PREDICTED: uncharacterized protein At4g22758 [Cucumis sativus])

HSP 1 Score: 313.5 bits (802), Expect = 2.4e-82
Identity = 163/187 (87.17%), Postives = 176/187 (94.12%), Query Frame = 1


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSA--PSLDGRPK 60
           MPNP+S+RKGKL EKSSSFHGE  TKTA  LRRPKTDPELLSFK LGLSA  PSLDGRPK
Sbjct: 1   MPNPRSHRKGKLAEKSSSFHGESSTKTATMLRRPKTDPELLSFKNLGLSASAPSLDGRPK 60

Query: 61  MTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYS 120
           MTKLL NVTIQGSLGPVQVLMSP+MTVADLV+ATVRQYLKE RRPILPTADPSAFDLHYS
Sbjct: 61  MTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYS 120

Query: 121 QFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWF 180
           QFSLESLN++EKLIALGSRNFFLCP+KS+DN+DL+ASSSSSSCS +AKE+AKSSSSFSWF
Sbjct: 121 QFSLESLNKEEKLIALGSRNFFLCPKKSDDNNDLIASSSSSSCSKEAKESAKSSSSFSWF 180

Query: 181 KFIEFRI 186
           KFI+FRI
Sbjct: 181 KFIDFRI 187

[Close]

BLAST of CmaCh02G013520 vs. NCBI nr
Match: gi|659117489|ref|XP_008458628.1| (PREDICTED: uncharacterized protein At4g22758 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 7.7e-81
Identity = 163/188 (86.70%), Postives = 175/188 (93.09%), Query Frame = 1


Query: 1   MPNPKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGL--SAPSLDGRPK 60
           MPNP+S+RKGKL EKSSSFHGE PTKTA  LRRPKTDPELLSFK LGL  SAPSLDGRPK
Sbjct: 1   MPNPRSHRKGKLAEKSSSFHGESPTKTATMLRRPKTDPELLSFKNLGLPASAPSLDGRPK 60

Query: 61  MTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYS 120
           MTKLL NVTIQGSLGPVQVLMSP+MTVADLV+ATVRQYLKE RRPILPTADPSAF LHYS
Sbjct: 61  MTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFGLHYS 120

Query: 121 QFSLESLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKS-SSSFSW 180
           QFSLESLN++EKLIALGSRNFFLCPRKS+DN+DL+AS SSSSCS +AKE+AKS SSSFSW
Sbjct: 121 QFSLESLNKEEKLIALGSRNFFLCPRKSDDNNDLIASPSSSSCSKEAKESAKSNSSSFSW 180

Query: 181 FKFIEFRI 186
           FKFI+FRI
Sbjct: 181 FKFIDFRI 188

[Close]

BLAST of CmaCh02G013520 vs. NCBI nr
Match: gi|1009114043|ref|XP_015873471.1| (PREDICTED: uncharacterized protein At4g22758 [Ziziphus jujuba])

HSP 1 Score: 197.6 bits (501), Expect = 1.9e-47
Identity = 116/204 (56.86%), Postives = 144/204 (70.59%), Query Frame = 1


Query: 1   MPNPKSYRKG----------KLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSA 60
           MP+PKS+R+G          +L+E+SSSFH E P   +  LRRPKT P+LLS      S 
Sbjct: 1   MPSPKSHRRGQEDRNHNRRGRLSERSSSFHSESPASNSLQLRRPKTLPDLLSNSARNTSG 60

Query: 61  PSL-DGRPKMTKLLFNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTAD 120
            +  DG PK+TKLL NVTIQGSLG VQV+MSP+ TV DLV A+VRQY KE RRPIL T D
Sbjct: 61  MAFFDGPPKLTKLLLNVTIQGSLGAVQVVMSPESTVGDLVTASVRQYAKEGRRPILTTTD 120

Query: 121 PSAFDLHYSQFSLESLNEDEKLIALGSRNFFLCPRKSE---DNDDL-------VASSSSS 180
           PS FDLHYSQFSLESL+ +EKLI+LGSRNFFLC RKSE   +  ++       VA++SSS
Sbjct: 121 PSKFDLHYSQFSLESLDREEKLISLGSRNFFLCLRKSEAAAEQSEIGIGSASGVATTSSS 180

Query: 181 SCSTQAKENAKSSSSFSWFKFIEF 184
           SCS +A + A + + F+W KF++F
Sbjct: 181 SCSKEASK-AVAKTGFAWLKFMDF 203

[Close]

BLAST of CmaCh02G013520 vs. NCBI nr
Match: gi|720072044|ref|XP_010278240.1| (PREDICTED: uncharacterized protein At4g22758 [Nelumbo nucifera])

HSP 1 Score: 189.5 bits (480), Expect = 5.2e-45
Identity = 110/181 (60.77%), Postives = 132/181 (72.93%), Query Frame = 1


Query: 5   KSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSAPSLDGRPKMTKLLF 64
           K  + GKLTEKSSSFHG R       L RPKTDP+LLS +K  ++A       K+TKLL 
Sbjct: 15  KVVKMGKLTEKSSSFHG-RSNLIPPQLLRPKTDPDLLSGRKFTVTAQET-APAKLTKLLL 74

Query: 65  NVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLES 124
           NVTIQ SLG +QV++SP+ TV+DL+AA VR Y+KE RRP LPT DPSAFDLHYSQFSLES
Sbjct: 75  NVTIQRSLGAIQVVISPESTVSDLIAAAVRLYVKEGRRPFLPTTDPSAFDLHYSQFSLES 134

Query: 125 LNEDEKLIALGSRNFFLCPRKSEDNDDLV--ASSSSSSCSTQAKENAKSSSSFSWFKFIE 184
           L  +EKLI LGSRNFFLCPRK +  D  V  +SSSSSSCS QA++ +K     SW +F++
Sbjct: 135 LGREEKLITLGSRNFFLCPRKQQVGDATVLSSSSSSSSCSNQAEKASK--IGVSWLRFMD 191

[Close]

BLAST of CmaCh02G013520 vs. NCBI nr
Match: gi|590587389|ref|XP_007015951.1| (Uncharacterized protein TCM_041515 [Theobroma cacao])

HSP 1 Score: 188.0 bits (476), Expect = 1.5e-44
Identity = 105/180 (58.33%), Postives = 131/180 (72.78%), Query Frame = 1


Query: 4   PKSYRKGKLTEKSSSFHGERPTKTAATLRRPKTDPELLSFKKLGLSAPSLDGRPKMTKLL 63
           P+  R+G+L+EK+SSFHG  PT   A LRRPKT P+LLS + + +S    D RPK+TKLL
Sbjct: 11  PEKNRRGRLSEKASSFHGRIPTIAPAELRRPKTLPDLLSERTISISQ---DARPKLTKLL 70

Query: 64  FNVTIQGSLGPVQVLMSPDMTVADLVAATVRQYLKEARRPILPTADPSAFDLHYSQFSLE 123
            NVTIQGSLG VQVLMSP+ TV DL+ A VRQY KE RRPILP+ + S FDLHYSQFSLE
Sbjct: 71  LNVTIQGSLGAVQVLMSPENTVGDLINAAVRQYSKEGRRPILPSTNASLFDLHYSQFSLE 130

Query: 124 SLNEDEKLIALGSRNFFLCPRKSEDNDDLVASSSSSSCSTQAKENAKSSSSFSWFKFIEF 183
            L  +EKL+ALGSRNFFLC +K+   D    +S ++SCS +A++  K  S   W KF++F
Sbjct: 131 RLEREEKLMALGSRNFFLCTKKAASKDG--ENSETTSCSKEAEKVTK--SVIPWLKFMDF 183

The following BLAST results are available for this feature:

BLAST of CmaCh02G013520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y4276_ARATH	3.0e-08	32.33	Uncharacterized protein At4g22758 OS=Arabidopsis thaliana GN=At4g22758 PE=2 SV=1	[more]

BLAST of CmaCh02G013520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KES9_CUCSA	1.7e-82	87.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G150560 PE=4 SV=1	[more]
A0A061GUN7_THECC	1.1e-44	58.33	Uncharacterized protein OS=Theobroma cacao GN=TCM_041515 PE=4 SV=1	[more]
A5C200_VITVI	5.8e-43	57.38	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009604 PE=4 SV=1	[more]
F6GW54_VITVI	1.7e-42	56.83	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g01250 PE=4 SV=...	[more]
A0A0D2N274_GOSRA	2.9e-42	55.79	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G119300 PE=4 SV=1	[more]

BLAST of CmaCh02G013520 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27830.1	6.8e-43	55.25	unknown protein	[more]
AT4G22758.1	1.7e-09	32.33	unknown protein	[more]
AT1G70780.1	2.3e-06	33.96	unknown protein	[more]
AT5G37730.1	8.7e-06	28.41	unknown protein	[more]

BLAST of CmaCh02G013520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456088\|ref\|XP_004145782.1\|	2.4e-82	87.17	PREDICTED: uncharacterized protein At4g22758 [Cucumis sativus]	[more]
gi\|659117489\|ref\|XP_008458628.1\|	7.7e-81	86.70	PREDICTED: uncharacterized protein At4g22758 [Cucumis melo]	[more]
gi\|1009114043\|ref\|XP_015873471.1\|	1.9e-47	56.86	PREDICTED: uncharacterized protein At4g22758 [Ziziphus jujuba]	[more]
gi\|720072044\|ref\|XP_010278240.1\|	5.2e-45	60.77	PREDICTED: uncharacterized protein At4g22758 [Nelumbo nucifera]	[more]
gi\|590587389\|ref\|XP_007015951.1\|	1.5e-44	58.33	Uncharacterized protein TCM_041515 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G013520.1	CmaCh02G013520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33270	FAMILY NOT NAMED	coord: 8..183 score: 7.6
None	No IPR available	PANTHER	PTHR33270:SF3	EXPRESSED PROTEIN	coord: 8..183 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G013520	Cucsa.385390	Cucumber (Gy14) v1	cgycmaB1067
CmaCh02G013520	Cla008673	Watermelon (97103) v1	cmawmB592
CmaCh02G013520	Csa6G150560	Cucumber (Chinese Long) v2	cmacuB631
CmaCh02G013520	MELO3C021455	Melon (DHL92) v3.5.1	cmameB548
CmaCh02G013520	ClCG02G021890	Watermelon (Charleston Gray)	cmawcgB541
CmaCh02G013520	CSPI06G12240	Wild cucumber (PI 183967)	cmacpiB636
CmaCh02G013520	CmoCh02G013890	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G013520	CmoCh20G005770	Cucurbita moschata (Rifu)	cmacmoB615
CmaCh02G013520	Lsi10G011940	Bottle gourd (USVL1VR-Ls)	cmalsiB540
CmaCh02G013520	Cp4.1LG16g04630	Cucurbita pepo (Zucchini)	cmacpeB622
CmaCh02G013520	Cp4.1LG05g04180	Cucurbita pepo (Zucchini)	cmacpeB644
CmaCh02G013520	MELO3C021455.2	Melon (DHL92) v3.6.1	cmamedB626
CmaCh02G013520	CsaV3_6G014700	Cucumber (Chinese Long) v3	cmacucB0753
CmaCh02G013520	Cla97C02G047950	Watermelon (97103) v2	cmawmbB629
CmaCh02G013520	Bhi10G000064	Wax gourd	cmawgoB0747
CmaCh02G013520	CsGy6G012300	Cucumber (Gy14) v2	cgybcmaB820
CmaCh02G013520	Carg02610	Silver-seed gourd	carcmaB1268
CmaCh02G013520	Carg03175	Silver-seed gourd	carcmaB0474

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh02G013520	CmaCh20G005510	Cucurbita maxima (Rimu)	cmacmaB479

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G013520	Cucumber (Chinese Long) v3	cmacucB0758
CmaCh02G013520	Cucumber (Chinese Long) v3	cmacucB0694
CmaCh02G013520	Watermelon (97103) v2	cmawmbB610
CmaCh02G013520	Watermelon (97103) v2	cmawmbB647
CmaCh02G013520	Cucurbita maxima (Rimu)	cmacmaB230
CmaCh02G013520	Cucurbita maxima (Rimu)	cmacmaB266
CmaCh02G013520	Cucurbita maxima (Rimu)	cmacmaB507
CmaCh02G013520	Cucumber (Gy14) v1	cgycmaB0152
CmaCh02G013520	Cucurbita moschata (Rifu)	cmacmoB628
CmaCh02G013520	Cucumber (Chinese Long) v2	cmacuB579
CmaCh02G013520	Cucumber (Chinese Long) v2	cmacuB641
CmaCh02G013520	Melon (DHL92) v3.5.1	cmameB585
CmaCh02G013520	Watermelon (Charleston Gray)	cmawcgB558
CmaCh02G013520	Watermelon (97103) v1	cmawmB582
CmaCh02G013520	Cucurbita pepo (Zucchini)	cmacpeB634
CmaCh02G013520	Bottle gourd (USVL1VR-Ls)	cmalsiB564
CmaCh02G013520	Bottle gourd (USVL1VR-Ls)	cmalsiB573
CmaCh02G013520	Cucumber (Gy14) v2	cgybcmaB123
CmaCh02G013520	Cucumber (Gy14) v2	cgybcmaB400
CmaCh02G013520	Cucumber (Gy14) v2	cgybcmaB829
CmaCh02G013520	Melon (DHL92) v3.6.1	cmamedB649
CmaCh02G013520	Melon (DHL92) v3.6.1	cmamedB668
CmaCh02G013520	Silver-seed gourd	carcmaB0346