CmaCh02G013380 (gene) Cucurbita maxima (Rimu)

NameCmaCh02G013380
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr02 : 7842135 .. 7843083 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCGAGTTGGAGGCTCTCGTCTATGGCTCATGTTGGCGTTGGCTATGGCTTATTGGCGTGCTCTCTCGAATTCCTCGTGATTTCCTTTAGCGACTGTTCGTTTGTTCTCTCTTTCTTCATTCATTTTCCCCAACGCTAAAACCAAACCAAATCCCTCTATTTTGTTTTCTCTTTCGTTTTTTTTTTTCATTCGATCCTTGGCTCTTTTGGTTTCCATTTTCGTATTGCTCTGTTCGGTGTCTTGGAGCCGTCGGTTTCGGAGGCTTGGATCATCCCCGACGTTACGGTGGGCAAGCTCGGTGGGTGGAGTGGGTTGCTCTCGTTGCATCGTTTCGCTGGAAATTTATGGTAATTATATGAGAGTTTTGCGTTTTTAGGGAGAATAGTTGTTTTACTGTGGAAGATTGAATGGCATGAGTTGATTGAGGTTGTGTGCTGTTTTATTTCTGCTGTTTTGGATGTATTTATGTATGCTATTGTTTAGAAAATGCTGAGTAATGAATCCTGCGTTTTGGTTTTTCTTTTGTTCATGTAGACTTTTTGAGTATGAAATTTGGAAAATTGTATGGATAATGAAGTTCGCCATTGATTATCTGCAAATTGTTAACCACGAATGTATATCCAAGGATGAGATATCTGGTGACGATTCTTTAAGTCAAAATTGATGCCGTTGCCTGGTGTTTAAATCATGGTTTGAAGTGAAATAGTAATTGACAGTGATATATTTGTTTTTGTTGCTTTCTCATGGACTCTAACATACGGTCTAAACTTTCTTTCATAAAGTTTTTAATGATGATTTTTGGTTGTTTGATGATACAATATTCCTTCGTATTATATTGGATCTTAGTGTGATTCCTGCATCAATGGTTTACTGACATGAAATGGAATCCTGGCAGACTTTTGATGTTTCATCTCAAAGTTCTTGGAAGAAATATGCTGGTTGA

mRNA sequence

ATGGAGTCGAGTTGGAGGCTCTCGTCTATGGCTCATGTTGGCGTTGGCTATGGCTTATTGGCGTGCTCTCTCGAATTCCTCGTGATTTCCTTTAGCGACTCCGTCGGTTTCGGAGGCTTGGATCATCCCCGACGTTACGGTGGGCAAGCTCGGTGGGTGGAGTGGGTTGCTCTCGTTGCATCGTTTCGCTGGAAATTTATGACTTTTGATGTTTCATCTCAAAGTTCTTGGAAGAAATATGCTGGTTGA

Coding sequence (CDS)

ATGGAGTCGAGTTGGAGGCTCTCGTCTATGGCTCATGTTGGCGTTGGCTATGGCTTATTGGCGTGCTCTCTCGAATTCCTCGTGATTTCCTTTAGCGACTCCGTCGGTTTCGGAGGCTTGGATCATCCCCGACGTTACGGTGGGCAAGCTCGGTGGGTGGAGTGGGTTGCTCTCGTTGCATCGTTTCGCTGGAAATTTATGACTTTTGATGTTTCATCTCAAAGTTCTTGGAAGAAATATGCTGGTTGA

Protein sequence

MESSWRLSSMAHVGVGYGLLACSLEFLVISFSDSVGFGGLDHPRRYGGQARWVEWVALVASFRWKFMTFDVSSQSSWKKYAG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G013380.1CmaCh02G013380.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh02G013380Cucurbita maxima (Rimu)cmacmaB230
CmaCh02G013380Cucurbita maxima (Rimu)cmacmaB470
CmaCh02G013380Cucurbita maxima (Rimu)cmacmaB498
CmaCh02G013380Cucurbita maxima (Rimu)cmacmaB507
CmaCh02G013380Cucumber (Gy14) v1cgycmaB0152
CmaCh02G013380Cucumber (Gy14) v1cgycmaB1067
CmaCh02G013380Cucurbita moschata (Rifu)cmacmoB607
CmaCh02G013380Cucurbita moschata (Rifu)cmacmoB619
CmaCh02G013380Cucurbita moschata (Rifu)cmacmoB628
CmaCh02G013380Wild cucumber (PI 183967)cmacpiB636
CmaCh02G013380Wild cucumber (PI 183967)cmacpiB648
CmaCh02G013380Cucumber (Chinese Long) v2cmacuB579
CmaCh02G013380Cucumber (Chinese Long) v2cmacuB631
CmaCh02G013380Cucumber (Chinese Long) v2cmacuB641
CmaCh02G013380Melon (DHL92) v3.5.1cmameB548
CmaCh02G013380Melon (DHL92) v3.5.1cmameB585
CmaCh02G013380Watermelon (Charleston Gray)cmawcgB541
CmaCh02G013380Watermelon (Charleston Gray)cmawcgB558
CmaCh02G013380Watermelon (97103) v1cmawmB582
CmaCh02G013380Watermelon (97103) v1cmawmB592
CmaCh02G013380Cucurbita pepo (Zucchini)cmacpeB627
CmaCh02G013380Cucurbita pepo (Zucchini)cmacpeB634
CmaCh02G013380Cucurbita pepo (Zucchini)cmacpeB644
CmaCh02G013380Bottle gourd (USVL1VR-Ls)cmalsiB540
CmaCh02G013380Bottle gourd (USVL1VR-Ls)cmalsiB564
CmaCh02G013380Cucumber (Gy14) v2cgybcmaB123
CmaCh02G013380Cucumber (Gy14) v2cgybcmaB820
CmaCh02G013380Cucumber (Gy14) v2cgybcmaB829
CmaCh02G013380Melon (DHL92) v3.6.1cmamedB626
CmaCh02G013380Melon (DHL92) v3.6.1cmamedB668
CmaCh02G013380Silver-seed gourdcarcmaB0332
CmaCh02G013380Silver-seed gourdcarcmaB0576
CmaCh02G013380Silver-seed gourdcarcmaB1268
CmaCh02G013380Cucumber (Chinese Long) v3cmacucB0758
CmaCh02G013380Cucumber (Chinese Long) v3cmacucB0694
CmaCh02G013380Cucumber (Chinese Long) v3cmacucB0753
CmaCh02G013380Watermelon (97103) v2cmawmbB602
CmaCh02G013380Watermelon (97103) v2cmawmbB629
CmaCh02G013380Watermelon (97103) v2cmawmbB647
CmaCh02G013380Wax gourdcmawgoB0747