CmaCh02G010850 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGTCGAAGACTTCCCGCTATAAATCTTCACCATTTCCCCAATTAGGGTTTTTGTACATTATCGGCCGTCGCCGTCGCCGTCGCCGTCTCAACTCTAGAGAGGGAGAGGGAGAGAGAGATTTGCATTAGGAAAAGATGAAGACGATCCTCTCATCGGAAACTATGGATATCCCCGAGGGGGTGAAGATCAAAGTGAACGCCAAAATCATAGAGGTAGAAGGCCCTCGGGGAAAACTCATTCGTAACTTCAAGCATTTGAATTTGGATTTCCAGTTGATTACCGAAGAGGAAACTGGAAAGAAGAAGCTCAAGATTGATGCCTGGTTCGGATCCAGGAAGACTTCGGCTGCCATTCGTACTGCACTTAGCCATGTTGAGAATCTCATCACTGGTGTCACTAAGGGTTATCGTTACAAGATGCGGTTTGTTTATGCTCATTTTCCGATCAATGCTAGCATCACCAGCGGCAACAAGTCTATCGAGATCCGTAACTTTCTTGGTGAGAAAAAGGTAAAACTCTTAACCCCACTTTATTGTCATATGTTTCACTATTTGTATTCTGGATTCATGTTTACTGCTGCGTTTGGAACTTTACCATAATTGAATGTTAAATGATCGATTTGTTGGTGTTAAGATGAACTGGTTGACTAAATTTGTAACTACTTAAAGACGAAAGCCCTAGCTTTACAATATCATTCATTCTCCTTCCTCCTTTCGTAATTGTTTTAGCCGTACCCCTTGAAAGAGCATATGTTTAAAAATAGATCAGTTAATTTGTACATTGTGTTTACTTGATTTGATTCTCCACAATGTCTATGGTTTAACTTCAGCACCAACAAGCACATTATGTCATTTAGAGAGCAGAAGCAGAGGGGTTCAACTTTTTTGGAGAATTATTGTTTTTTCTATTTTACTATCGGTATCTAAAATAAAAAATGATGTTCCTTAAGGTTGAGTTGAAAAAAAAAAACTCCCCACGGTCAGGATTTTGGGTTTTTTTAATATGTTTTTTTCTCGCTCACATGCTTGGTAGAATAATTGCTTAGTAGTTGAATTTCTCTAACTCAAGCATGATGAACTTTGATATTCCAAAGATGGGGCCACTAAAAAAAAAGGTGTATTTTGTTTGTCTAGATAGTAATTTCAATTATTTGGAGTCGTTCTCAAACTTTCTAACCCTAGGATCACTCTTTATTCATGTACTTCTTTACTTGAGTCTCTCAAAAAATGTAGTTAATACTACTTTGATTACATTAAAAGGAAATAGATACATTGAATGCTGTCCTTTGGTTATTTCATCCAGAGTCCAATTGTTACAAAATTCAAACATTTATATAAACATAACAAGTACGTACTCCAAATAACTTTTATTAAAAAAATCCTCTTTTGTATTTTCATGCTTATTAACAATTGTTCTTGTAAGCACATTTGTTACTATTTATATGATGCATGGATGTGAAGTCTTTCTTCTCTGCAAAACAGGTGCGAAAGGTGGATATGCTTGACGGAGTATCGATTGTTCGATCTGAGAAGGTCAAAGATGAGTTAGTCTTGGATGGTAATGATATAGAGCTTGTATCTCGATCTGCTGCCTTGATAAACCAGGTCCTCTCTTCCACTCCACTTTGTGATTGATTCTTGCTTGCAAAACTTCTCCGCCTGTACAGGCATAATCAGTAGTCTTATACTTTTTTTTCCTTCTGGATGACAGAAATGCCATGTCAAGAACAAAGACATCCGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACTGTTTTGGAAGAGGAGTGAAGAATCTAGTTCTGTTCAACCACGTTTTGGCCTTTGGAGATAATTTCATCTTATATATTTTATGTTTCATAAGTAGAGAAATTCATGGAAGCTGTCTTTTTGGAGGGATAAGTATGTGCTGTAGACAAATTCACAAGCTTTTTAGTTCGTGGCTGATGTCTGATAGAGGAAATGCCAGTTTTTTAGTTCAATTTGTAGTTAGTATGGTACGATGAAGCAAAATTAGTGCTTGTGGATTCACTTCTTCTTGACTTTTGGCCATAAATTTTGCAATTTTGCAATTTTTCGTTTGCTAACTTCATATTTGGTGTCTGACCAAGTTTACGTTTTGTCATATATAGAAAGCTGTTTTTTCCTGTATTTCTCACACTTTTCTTGTAATGATTGGCTAGTCGATGTG CAGTCGAAGACTTCCCGCTATAAATCTTCACCATTTCCCCAATTAGGGTTTTTGTACATTATCGGCCGTCGCCGTCGCCGTCGCCGTCTCAACTCTAGAGAGGGAGAGGGAGAGAGAGATTTGCATTAGGAAAAGATGAAGACGATCCTCTCATCGGAAACTATGGATATCCCCGAGGGGGTGAAGATCAAAGTGAACGCCAAAATCATAGAGGTAGAAGGCCCTCGGGGAAAACTCATTCGTAACTTCAAGCATTTGAATTTGGATTTCCAGTTGATTACCGAAGAGGAAACTGGAAAGAAGAAGCTCAAGATTGATGCCTGGTTCGGATCCAGGAAGACTTCGGCTGCCATTCGTACTGCACTTAGCCATGTTGAGAATCTCATCACTGGTGTCACTAAGGGTTATCGTTACAAGATGCGGTTTGTTTATGCTCATTTTCCGATCAATGCTAGCATCACCAGCGGCAACAAGTCTATCGAGATCCGTAACTTTCTTGGTGAGAAAAAGGTGCGAAAGGTGGATATGCTTGACGGAGTATCGATTGTTCGATCTGAGAAGGTCAAAGATGAGTTAGTCTTGGATGGTAATGATATAGAGCTTGTATCTCGATCTGCTGCCTTGATAAACCAGAAATGCCATGTCAAGAACAAAGACATCCGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACTGTTTTGGAAGAGGAGTGAAGAATCTAGTTCTGTTCAACCACGTTTTGGCCTTTGGAGATAATTTCATCTTATATATTTTATGTTTCATAAGTAGAGAAATTCATGGAAGCTGTCTTTTTGGAGGGATAAGTATGTGCTGTAGACAAATTCACAAGCTTTTTAGTTCGTGGCTGATGTCTGATAGAGGAAATGCCAGTTTTTTAGTTCAATTTGTAGTTAGTATGGTACGATGAAGCAAAATTAGTGCTTGTGGATTCACTTCTTCTTGACTTTTGGCCATAAATTTTGCAATTTTGCAATTTTTCGTTTGCTAACTTCATATTTGGTGTCTGACCAAGTTTACGTTTTGTCATATATAGAAAGCTGTTTTTTCCTGTATTTCTCACACTTTTCTTGTAATGATTGGCTAGTCGATGTG ATGAAGACGATCCTCTCATCGGAAACTATGGATATCCCCGAGGGGGTGAAGATCAAAGTGAACGCCAAAATCATAGAGGTAGAAGGCCCTCGGGGAAAACTCATTCGTAACTTCAAGCATTTGAATTTGGATTTCCAGTTGATTACCGAAGAGGAAACTGGAAAGAAGAAGCTCAAGATTGATGCCTGGTTCGGATCCAGGAAGACTTCGGCTGCCATTCGTACTGCACTTAGCCATGTTGAGAATCTCATCACTGGTGTCACTAAGGGTTATCGTTACAAGATGCGGTTTGTTTATGCTCATTTTCCGATCAATGCTAGCATCACCAGCGGCAACAAGTCTATCGAGATCCGTAACTTTCTTGGTGAGAAAAAGGTGCGAAAGGTGGATATGCTTGACGGAGTATCGATTGTTCGATCTGAGAAGGTCAAAGATGAGTTAGTCTTGGATGGTAATGATATAGAGCTTGTATCTCGATCTGCTGCCTTGATAAACCAGAAATGCCATGTCAAGAACAAAGACATCCGGAAGTTCCTTGATGGTATTTATGTCAGCGAAAAGGGAACTGTTTTGGAAGAGGAGTGA MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITSGNKSIEIRNFLGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTVLEEE
BLAST of CmaCh02G010850 vs. Swiss-Prot
Match: RL9_PEA (60S ribosomal protein L9 OS=Pisum sativum GN=RPL9 PE=2 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 6.0e-92 Identity = 172/194 (88.66%), Postives = 184/194 (94.85%), Query Frame = 1
BLAST of CmaCh02G010850 vs. Swiss-Prot
Match: RL91_ARATH (60S ribosomal protein L9-1 OS=Arabidopsis thaliana GN=RPL9B PE=1 SV=3) HSP 1 Score: 331.3 bits (848), Expect = 7.3e-90 Identity = 164/194 (84.54%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of CmaCh02G010850 vs. Swiss-Prot
Match: RL92_ARATH (60S ribosomal protein L9-2 OS=Arabidopsis thaliana GN=RPL9D PE=2 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 3.1e-88 Identity = 161/194 (82.99%), Postives = 179/194 (92.27%), Query Frame = 1
BLAST of CmaCh02G010850 vs. Swiss-Prot
Match: RL9_ORYSJ (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica GN=RPL9 PE=2 SV=3) HSP 1 Score: 318.5 bits (815), Expect = 4.9e-86 Identity = 157/193 (81.35%), Postives = 179/193 (92.75%), Query Frame = 1
BLAST of CmaCh02G010850 vs. Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.1e-58 Identity = 115/194 (59.28%), Postives = 145/194 (74.74%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TrEMBL
Match: E5GBD5_CUCME (60S ribosomal protein l9 OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 1.2e-99 Identity = 187/194 (96.39%), Postives = 193/194 (99.48%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TrEMBL
Match: A0A0A0KJL8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139920 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 6.0e-99 Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TrEMBL
Match: W9SMP3_9ROSA (60S ribosomal protein L9 OS=Morus notabilis GN=L484_000672 PE=4 SV=1) HSP 1 Score: 361.7 bits (927), Expect = 5.6e-97 Identity = 182/194 (93.81%), Postives = 190/194 (97.94%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TrEMBL
Match: M5X166_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011825mg PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 9.6e-97 Identity = 181/194 (93.30%), Postives = 190/194 (97.94%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TrEMBL
Match: B9RYZ1_RICCO (60S ribosomal protein L9, putative OS=Ricinus communis GN=RCOM_1315040 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.4e-95 Identity = 179/194 (92.27%), Postives = 189/194 (97.42%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TAIR10
Match: AT1G33120.1 (AT1G33120.1 Ribosomal protein L6 family) HSP 1 Score: 331.3 bits (848), Expect = 4.1e-91 Identity = 164/194 (84.54%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TAIR10
Match: AT1G33140.1 (AT1G33140.1 Ribosomal protein L6 family) HSP 1 Score: 331.3 bits (848), Expect = 4.1e-91 Identity = 164/194 (84.54%), Postives = 182/194 (93.81%), Query Frame = 1
BLAST of CmaCh02G010850 vs. TAIR10
Match: AT4G10450.1 (AT4G10450.1 Ribosomal protein L6 family) HSP 1 Score: 325.9 bits (834), Expect = 1.7e-89 Identity = 161/194 (82.99%), Postives = 179/194 (92.27%), Query Frame = 1
BLAST of CmaCh02G010850 vs. NCBI nr
Match: gi|659074316|ref|XP_008437538.1| (PREDICTED: 60S ribosomal protein L9 [Cucumis melo]) HSP 1 Score: 370.5 bits (950), Expect = 1.7e-99 Identity = 187/194 (96.39%), Postives = 193/194 (99.48%), Query Frame = 1
BLAST of CmaCh02G010850 vs. NCBI nr
Match: gi|449456337|ref|XP_004145906.1| (PREDICTED: 60S ribosomal protein L9 [Cucumis sativus]) HSP 1 Score: 368.2 bits (944), Expect = 8.6e-99 Identity = 186/194 (95.88%), Postives = 192/194 (98.97%), Query Frame = 1
BLAST of CmaCh02G010850 vs. NCBI nr
Match: gi|1009123799|ref|XP_015878732.1| (PREDICTED: 60S ribosomal protein L9 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 365.9 bits (938), Expect = 4.3e-98 Identity = 184/194 (94.85%), Postives = 192/194 (98.97%), Query Frame = 1
BLAST of CmaCh02G010850 vs. NCBI nr
Match: gi|703144662|ref|XP_010108337.1| (60S ribosomal protein L9 [Morus notabilis]) HSP 1 Score: 361.7 bits (927), Expect = 8.1e-97 Identity = 182/194 (93.81%), Postives = 190/194 (97.94%), Query Frame = 1
BLAST of CmaCh02G010850 vs. NCBI nr
Match: gi|596006920|ref|XP_007218455.1| (hypothetical protein PRUPE_ppa011825mg [Prunus persica]) HSP 1 Score: 360.9 bits (925), Expect = 1.4e-96 Identity = 181/194 (93.30%), Postives = 190/194 (97.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |