CmaCh02G004640 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G004640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Peptidyl-tRNA hydrolase 2
Location	Cma_Chr02 : 2428703 .. 2437921 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGTTTTCTGGGAATGGGGAAAGAAACTTCAGCATTTTGAGAAGTAACTCGAGCAGGAGCACTACAGAAAGCGCATGGTTCGCCTCCTCGAACACAGCCTTCAGTGATGGCGGACTTATGCTGAAGTCTGATCTAAGATTCTGGCTGCCGATCGTCAGCTAAATGCAATCATAAAGCTTCATCGTCATTCAACGCCTGGTAATGCTGTTTTTTTTTTTTCACCTGTTTTGTTCTTCATTTCCTGAAAAGAATGTTATTTTGACAAACGTCTCGCAAGTTTCTATCATGAACTGCATCATCTGCGATGCGATGAGAAGGACCTGGATTGGTAAATTTATAGCTGAATATTAGGGTTTTAAGTTTGTATGTATGTTTGCTGAGAAATCGACATTGTACGATTGTTTTGATGCGAGGGCATCTTGGATTGACTTTGTTAATTAGCTTTTTTTTGTGAAGCGTACTTTGGAATCTGATTGCTTACTTTTGAAGCAGTTTGTACCTTTACTGTGTAAGAAAATGCCCTACAGTTAGTTATTTGTATATTCATGATCTATTTGCTAGGTTGATCAGATATTGGCATTATTACAATATTTGTGTTCCAGAAAAATTGGATCTCCAAATGACATTCATATTGTTTTTAATGCTATCTGCATAGCAAAATAAAGTAAAAATCGGTAGTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTGTACTTATAATCCTAAAGTTGAGAAAATTCCTGCTATTTCTTTCACTCTGTCTTGGATTTTTTTTCTTCTTTCCTCTAGTTGGTGTTTTCTTCCTGTATTTACTGTTTCTGAGTTTAATGTTGAGCTTTCCTGTTCTATGTAGGATTTATATTGCTTGAATTAGAATTTGGTATCTGGGCCAGTATTATCTATCCTTGCTGGTCTTCAATACTGGAGGAGTGCATTTTGGAGACTAAATTGGATGGATCTGACATGGCTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTGTATTCGTTCGAAGTATCCTCCTCGCATCTTTATCAAAGCCAAATTAGCCAAAAGCAACGAATCCAGCAGAAGTGGGAAGAAGGGCAAGCCTAAAGAGCCACTGGAGATCGAAAACTTGGCTGACATTCTCGAGGACTTCAAGATGGTCTGTCTCTGACTCTCTGTCTATTTCTGTTTCTCTTTGATGACTCTAAGGCGTTCTCTTTCTCTTTCACTCAAAAAATGCAATAACACTTCATGTGTCTCTGCAGGTTTTAGTCGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCTGCCCAATGCAGGTACTTTTTTACCACCTTGTGGTTTCTCTTTCATTCCCTGATGTTTTGAATGCTAACAATCATAGAAATCTTGAATTTTACTGCTGCTTGTATTATGTACATGCCCGAGTAGCTTTTTGTTAAAACTAGTCCCAAGAATTGGGCATATAGTGTTTAGGAGTTTAGGTTAACAATGCACTGCACACCTGGTATATTAAACTTCCCAAAATGCCTATAACAAATTTTACTAGAATAATGACTATAATAACATGGCTTTGGATAATAGTAGTTTTGAAGTAGAAGTTGAAATAATGCAAAATTTTGGATGATAATATTGCTCCTATTTTTTTTTTTTTTTTTTTTGAAATTTGGCACTGTTAAAATCGAAAAAAATTATTGATGCATGGAATCTACATAACTACAGCAATCTTGTAACGCTCTCTCATCTCTCCCTTCTCTCCCTCCTTCCTACCATCCTGCCTAATCCAAATTTGTCTCACTATGATCTAGCCATTGCTTCAGGGTGGTGGTTCGTAGTTGTAAGGTTCTTGATTTGTTCTTTTGTATTGGTCTAGAAGAGGATTTTATTTTCATGGAAGATGAGGCTTTTCACCAAGTCCTTCCTCTTTCTTTATCACATTTGAGGTTGGCTCAAAATTTCCTTAGTTTAATTATTGCATTAGCCAATCCATAAATTCTTCCTCAAGCTTGGTCGTGATGGGGCTTTTCGTTTGGGGCATCTTCGTATGTCATTAGGATGGTTTATGAGTTTTGTTGTTTGGCCGTCATCAGGTGGTAGAAATTCATTCATGTGCCAATGGGATTTTTGAAAATGGATTGGCCTTCTTTTTTGGGAAATGTTAAGTGATTTTCTTAAGCCATTCCTGTTTGAGATGTTTTCAAGTACCCACTCATTCCAAATGAACCATAGGAAGCCCTAATAAAATAAAATTACTTGGTGAGGAAGTATAATAATCTTCCCTAGAGTAAAAGATCTTCATGAAGTTTGCAGATTCCATTTTGTATCTTTTCCGAGATCAGTGACATGAAACTTGATAGGGGCCAACAATGCTGGATTTGCAAAGCAAGAGGTCCTTCTAGGATCTTTGCAAACTTTCACAAGTAAAACTAACTTAGCAATGATTCCAACCAAGAGCTGGTTAGAAGGATGAAATACTCTTATATCGAATTTGGAATCTATGATGGTCACTTTTAGATCTCTAACCGACTCACTCCGGAATTAGCTTGATCAAGACTAATCCAATGAATCGATTTAACTTCAAATCTAAAGCAAGGTTTGAAAAAAGAAAAATAACACCCGAAGGGTTTCCAAGAAAACACAACGTTTTTTATTCCACCATGATCAATATTACATGCCTTTAATTAGACCAAAAAGAAAAAGATAATCCAAACATAATGGTAGTTCATCTATCAACAACCGACTACCAATAAAAGTTATTAAATAAAAATTGAAGAAAATAAGACATGACATAAATAGTCTTAAATGGTAGTTCAACTACCAAAGACAAAAAGTCTTCAAATCACTTCCCAATACACTCCATTCTTTTCTTGATTTGATATACTAATATTATAAAGATTTTTGGACTAAAAAAATCCCATTGTCCTCTCATTTTTTTAATGAATTACATAAAGAAATGTAATTTCATATGGACATGCATTATCAAGAAGGGAATGAACCCTTTGATTTGAGGTCAAATCTTTTTAAAGAGAGAGGGATGATATGAATCCAACACTAAACTAATCCTACTAATCATGTACCCAAAGTAGCGATTACAAGAAGTAGGGTAAAGAAATTCAAGTAGCGATTACAAGAAGTAGGGTAAAGAAGATTCAAGAGGCCTTTACATTACATCTTTAAAGGCTAGCTAATGTACAAGTTGAAACAAAGATTTTTTAGAACAAAAATCTTTATAATATTAGTATATCAAATCAAGAAAATAATGGAGTGACAATAAACACTACTTGACATTGAAAAGTGATTTGAAGACTTTGTGTTTGGTAGTTGAACTACCATTTAAGACTATTTATGTTATGTCTTGTTTTCTTCAATTTTTATAGTTGAACTACCATTTAAGACTATTTATGTTATGTCTTATTTTCTTCAATTTTTATTTAATAGCTTTTATTGGTAATGGGCAATTGGTAGTTACCATGTTTGTATTATCTTTTTGGCTTATTTAAATATACGTAATATTCAAGTTGGAAAATCATGTGAAATAAAAAAACTTTTGTTTTTATTGAAATCCTCTAGGTGTTATTTTTATTTTTTTCAAACCTTACTTTAAGTTTGAAGTTAAACCGATTTTGGAGTTTGTCGTCTTGGGATTTAAGAGTGACCATCATAGATTCCAAGTTCAATCTAAGAGTTATTCATCCTTTTAACTAGCTCTTGGTTGGAATCATTTGTTAAGTTAGTTTTATTTGTGAAAGTTTGCAAGGACCTCTAGCTTTGCAAATTCATCAATGGTCGACGCTTATCATTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGTAAAGCTTGATTATAACCAATTCAACGATTAACTCTCACGAACTAAGACTAGTATCTCATCCTTAGGATCAATAACTTGAAAATTTTGAACAAGACTCAAATTAATGACAAGAACGGAATACTTTGAGACATTTCTTTGATAATTCGGGAGACTCAGAAAAATTGACAGAAAAAGAATAACATAAAGTAAATATATTTTACCTCTAGAGCCAACCAAAGAACGTCGACCAAATGCTCTGATACCAAGTGATAAGTACCAACAACTGTTGGATTTGCAATGCTAGAGGTCCTTCTAGGATCTTTGCAAACTATCACAAATAAAGCTAACTCAACAAATGATTCCAACCAAGAGCTGTTTAGATGGATGAGTAACTCATAGATCAAACTTGAAATTTATGATGGTTACTCTTAGATCTCAAGACGACTCACTTCAGAATTAGCTTGATCAAGACTAATCCAATGAATTGGTTTAACTTCAAACATAAAGCAAGGTTTGAAAAAAAATAAATAAAATAACACTCAGGGTTTTCAAGAGAACATAAGGTTGTTGTATTCACCATTATCCTCAAACTTGAATATTACATGTCTTTAAATAAACCAAAAAGATAATTCAAACATAATGGTAGTTCATCTCCCAACAACCAGCTACCCATAAAAGCTATTAAATAAAAATTGAAGAAAATAAAATATGATATAAATAGTTTTAGATGGCAGTTCAACTACCAAAGACAAAAGTCTTCAAATCACTTGAATCACTTTCCAATGTCAAGTGATGTTTATTGTCACTCCCTTCTTTTCTTGATTTGATATACTACTACTGTAAAGATTTTTGGGCTAAAATTTTTTTGTTTCAACTTGTACATTAGCTAGCTTTTGAAAATGTAGCGTAAAGGCCTCTTGAATCTTCTTTACTTTGCTTCTTGTAATTGCTACTTCAAATACATTTCAAATATATGCAAATGATTACAAATACATGCAATTGATTAGTGGTTTGATTCATCTCAAAGCTTTTCAAGCATACAAAATACATATTCTAATAATACTTAGGCATTTCTTGAAGAAAGTAATAATATGGACCAAAACCAGACTTAACTTTCTTGTTCTGGTCTTTAAAAAACCCTTATTACATAATTGCAATTCTCAGCTAACTTTTTGGCGGATACTTACTGAAAGAACCATCAATTCTACACAAACATTTATATTACTACTTCTTGAGAGGCCAAGCTTTCACATTATTTAATGACTACTGGTAATCTAATTTTCTCAAATCTTTGCACTGTGAACTTCCCAGTTTCTTAATGCTGTAAATTGAATTTCGACTAGCTTTTAATCTACTTTGCTTGCTTTTGTTAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCGAAAGCCTTGAATAGGTATGTATGTACAGGATAGTCCTCCCTTTATTAATGGGCATCATATACTTCGTTCTCGGCTCATTTATTTGATTTTATTTACATGCAGATGGGAGATGTGTGCACAACCCAAGGTGGTTCTGAAAATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGTAACAATTCCACTATGATTTCCTTTTTCTAAGAATTCCACTGTGATTTTATGGTATCTTGCTGATTTTTTGCTATCCGTATATGTCGAAAGCATATCACATTTGCAGTTGGTCAATATTTATTAGTTTTTCTAGTTTGTGCATATGTATTTATAATAATGATGTAAGCTTAATTTTGCATAATATCTGAGACAATTCTATACAGCTTGATCTTTTTTATATTTCTTCTATTCTTTGAGGCTTCTGAGTTCCCTCTGATTCTTATACTTTTAGGTGTTGATCTTAGTTCTTTTAGTTTTCAAACTTTTATATATTATTGTACATCAGGAGAGGGCAAAATCATTGAAGCTACCAACTCATATTACCATTGATGCCGGAAGAACTCAAATTGCTCCTAGTAAGTTATATGAAATTCACTTAAATGGGTCGACGTTTTAATACCAACTTTATCAAATTCACTCATTTTCACTTTTTTGTTCTTCTAGATTCGAGAACGGTGATGGCAATTCTTGGTAAGTGATTTTTTTTCCATGCAACCATTATATATTAATCAAGGAGTTTTCTCTTTGCTGCCTTATACAATTTAAGCATTCCTTTTTGGCAAAATTCCTCAGATAAATTTTCAGACTACTTTGGGAAGCTTTATTCTATCATAATAGCCCAGCAACCTCCCTACCTCTTTTGCGTTTTTGTTATAACTCATGTTTGGTTAGCTTAGCTGGTGGATCTACTGAACAATTTCATATTGTTGCATTCCTACTTGAATTAGTATTGGGGTATATTGGTTCGTATCGTCTCAATTTGAGTGTCAATTGGAACTGAACCACAAGAAATATAAAGAAAAATGGAAAAACTGAGCCGAGCCGAGCCGAGCCGAACCAAACCATTCTATGACGCATAACCAAACTGCCCAAACTGTTAACCATTGGTTTAGCCAGTTTGATCTGGCAGTTAGCCATTTGCAATAACTCCAAGAAACAAGCTGGTTTGGTTGGACTCTGTTCGCCTTGCCAAAATTGAGCCCGACCGAATTTAATTGGTTTTCCTTGTATGCAAACCAAACCTGTTCCAGACCTAATCAACATTGGTTTCGGTCAGTTAAAGTGATTTTTTTTGTCAGTTTTTCGTTGCACCCCGAATTAGTATTAACTAACTCGATTCATCCAATGAGATATGAGTATATCAGTAGTGTATAGACTAATACACTTTTTACTTCACAAATTGCAGGTCCTGTTGAAGTGGTTGATGATGTAACTGGTGGGTTGAAACTCTTGTAGTTTCAAAATTCTTGACTGTTACCACCTCAAAATTCTCGACTGTTACCACCTCAAAATTCTCGACTGTTACCACCTCAAAATTCTTGAAGACTTCAGGTCTGTAGCAGAAAGCTCTGCAAAATCCATCCATGCTTGGACCAACAACACGGTATGAAACCAATCTACGCAGAGCTAAGCTATCGCGATTCTAAATACTATTACCATTTCTGATGATGACAATGATGACCATGTCTAAGTTAACCTATTTCTTATGCAAATAGAAACAGTTGGGAAGTTCTTGGATTACCTTGCTTTAGAACTATCTATATTTCAGTCTATTCTCTATTTAATTTGTTTCTATTGCATTGTTTTAAGGATTTAGAGTTTATATTCAATCAAACCAAGTTCCATTTGGTTCGTCCAAGTTTCAACACGTATGCAAATAATGTTTATAAAGATCATTTCTGGACACTTAATCACATAGCATATATGTTTTTCTTACGGTTGAATTACAACATAAGCATGTAGCTTATTTATGTACTCCCTGATACAAAAAACTAAAACAAGGCATTGAAAATATGTCAATCAACCGAGATGAAAATAGCAAGCTAAGAAGAATAGGTCCTCACTCCTCACATTGTTTTGGCCAAATACATGTGATATATATGTTGGGGTATGATCAGGGCTACACAAGTTTGGACTTGCAGCGATTCTTGGATGAATTAAGATCTTCCCTCTTGTTTAGCTTGATCCTCAGCTAAAACCTTCTCCTTTGTTTTGTGACTGACTTCTACGGCCGCTTTTGCGACTCTTTGAAACGTCTGGGTAACCCAGGAAGCCCCGGTTGAGACGTACCGGTTAGCCATTAAGGCTGTTCCTGCATTGTTCACCGCAGCCTTGGTTTTCTCAGACACTTGAAACTTCTCATCCATTTCTTTCACTTTCTCATTCACCACTGTCGTGCCAACGCTAATCTTCTCGCTAAGGCCGATCTTTTGGTCCAGAGAAAGGACTTTCGATGAGGCTGTTGATGTCAATTGGTGCTTCTGGTCAAAAGACTTTGCCCTATTGAGGGTATCTTTGCCCAAAGTGAAGCCTTTAGCCAGCATGCTGCTCACAACATCCTCGGCCTTTTGCATTGCAGATCCAGCAGTACCAGAGCCTGCGTTCTCTGCAGACTGGTGAAACATGTTTGTTCATTCATGTCAGAAATTGGAAAGACAGGATTGAAAATTACTGTAGGATTAAGATCGAAGAAAATACTGGAGAAGACACTGGTAGAGGGGCACTGGCAGGTACAGCAGGAAGATTGTAATCTGGAGCAGTAGCAATGCTAACAGGCTGATCAACAATTGTAGCTCCCTGAGAAACGCAAGACAGTTTAATCAAGGTAAGAAAACAGATGAAACAAGAAAAAATCACTTGGTAATGAGACATAGAAATCAAGTTAACTATGCATTTTGAACACATCACGGCAATCATATTGAAGACATTCGAAACAAATGGATGAGAACTTTGTTTAACCTCTTCTATCTGAAGAATGAAACTCTGTTCTAAGTAATTTTCAAACCTTAGAGCCAATTTCATAACATAAGAGAGGTTCTACATTCCTGAAACAGTTTCTAATGGAAGCTTAAGTAAACAGTTTCTAATTCAGAATATCTTAAGTTTACGGACAATTGAAATGAAGAAAGGGAAGAATAGAGAATTGTATCAACC

mRNA sequence

TCAGTTTTCTGGGAATGGGGAAAGAAACTTCAGCATTTTGAGAAGTAACTCGAGCAGGAGCACTACAGAAAGCGCATGGTTCGCCTCCTCGAACACAGCCTTCAGTGATGGCGGACTTATGCTGAAGTCTGATCTAAGATTCTGGCTGCCGATCGTCAGCTAAATGCAATCATAAAGCTTCATCGTCATTCAACGCCTGGATTTATATTGCTTGAATTAGAATTTGGTATCTGGGCCAGTATTATCTATCCTTGCTGGTCTTCAATACTGGAGGAGTGCATTTTGGAGACTAAATTGGATGGATCTGACATGGCTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTGTATTCGTTCGAAGTATCCTCCTCGCATCTTTATCAAAGCCAAATTAGCCAAAAGCAACGAATCCAGCAGAAGTGGGAAGAAGGGCAAGCCTAAAGAGCCACTGGAGATCGAAAACTTGGCTGACATTCTCGAGGACTTCAAGATGGTTTTAGTCGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCTGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCGAAAGCCTTGAATAGATGGGAGATGTGTGCACAACCCAAGGTGGTTCTGAAAATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGCTACCAACTCATATTACCATTGATGCCGGAAGAACTCAAATTGCTCCTAATTCGAGAACGGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTTGATGATGTAACTGGTGGGTTGAAACTCTTGTAGTTTCAAAATTCTTGACTGTTACCACCTCAAAATTCTCGACTGTTACCACCTCAAAATTCTCGACTGTTACCACCTCAAAATTCTTGAAGACTTCAGGTCTGTAGCAGAAAGCTCTGCAAAATCCATCCATGCTTGGACCAACAACACGGTATGAAACCAATCTACGCAGAGCTAAGCTATCGCGATTCTAAATACTATTACCATTTCTGATGATGACAATGATGACCATGTCTAAGTTAACCTATTTCTTATGCAAATAGAAACAGTTGGGAAGTTCTTGGATTACCTTGCTTTAGAACTATCTATATTTCAGTCTATTCTCTATTTAATTTGTTTCTATTGCATTGTTTTAAGGATTTAGAGTTTATATTCAATCAAACCAAGTTCCATTTGGTTCGTCCAAGTTTCAACACGTATGCAAATAATGTTTATAAAGATCATTTCTGGACACTTAATCACATAGCATATATGTTTTTCTTACGGTTGAATTACAACATAAGCATGTAGCTTATTTATGTACTCCCTGATACAAAAAACTAAAACAAGGCATTGAAAATATGTCAATCAACCGAGATGAAAATAGCAAGCTAAGAAGAATAGGTCCTCACTCCTCACATTGTTTTGGCCAAATACATGTGATATATATGTTGGGGTATGATCAGGGCTACACAAGTTTGGACTTGCAGCGATTCTTGGATGAATTAAGATCTTCCCTCTTGTTTAGCTTGATCCTCAGCTAAAACCTTCTCCTTTGTTTTGTGACTGACTTCTACGGCCGCTTTTGCGACTCTTTGAAACGTCTGGGTAACCCAGGAAGCCCCGGTTGAGACGTACCGGTTAGCCATTAAGGCTGTTCCTGCATTGTTCACCGCAGCCTTGGTTTTCTCAGACACTTGAAACTTCTCATCCATTTCTTTCACTTTCTCATTCACCACTGTCGTGCCAACGCTAATCTTCTCGCTAAGGCCGATCTTTTGGTCCAGAGAAAGGACTTTCGATGAGGCTGTTGATGTCAATTGGTGCTTCTGGTCAAAAGACTTTGCCCTATTGAGGGTATCTTTGCCCAAAGTGAAGCCTTTAGCCAGCATGCTGCTCACAACATCCTCGGCCTTTTGCATTGCAGATCCAGCAGTACCAGAGCCTGCGTTCTCTGCAGACTGGTGAAACATGTTTGTTCATTCATGTCAGAAATTGGAAAGACAGGATTGAAAATTACTGTAGGATTAAGATCGAAGAAAATACTGGAGAAGACACTGGTAGAGGGGCACTGGCAGGTACAGCAGGAAGATTGTAATCTGGAGCAGTAGCAATGCTAACAGGCTGATCAACAATTGTAGCTCCCTGAGAAACGCAAGACAGTTTAATCAAGGTAAGAAAACAGATGAAACAAGAAAAAATCACTTGGTAATGAGACATAGAAATCAAGTTAACTATGCATTTTGAACACATCACGGCAATCATATTGAAGACATTCGAAACAAATGGATGAGAACTTTGTTTAACCTCTTCTATCTGAAGAATGAAACTCTGTTCTAAGTAATTTTCAAACCTTAGAGCCAATTTCATAACATAAGAGAGGTTCTACATTCCTGAAACAGTTTCTAATGGAAGCTTAAGTAAACAGTTTCTAATTCAGAATATCTTAAGTTTACGGACAATTGAAATGAAGAAAGGGAAGAATAGAGAATTGTATCAACC

Coding sequence (CDS)

ATGGATCTGACATGGCTGAGTGCCATTGTAGTTGGGGCCGGCTGCCTTGTTTTGGGATACTGTATTCGTTCGAAGTATCCTCCTCGCATCTTTATCAAAGCCAAATTAGCCAAAAGCAACGAATCCAGCAGAAGTGGGAAGAAGGGCAAGCCTAAAGAGCCACTGGAGATCGAAAACTTGGCTGACATTCTCGAGGACTTCAAGATGGTTTTAGTCGTGAGAAATGATTTGAAAATGGGAAAAGGAAAAATTGCTGCCCAATGCAGTCATGCAACTTTGGGTCTCTATAAGAAGCTCCATTATCGTGCACCGAAAGCCTTGAATAGATGGGAGATGTGTGCACAACCCAAGGTGGTTCTGAAAATAGAAAGTGAGGAAGACATGCTAGTTTTGCAAGAGAGGGCAAAATCATTGAAGCTACCAACTCATATTACCATTGATGCCGGAAGAACTCAAATTGCTCCTAATTCGAGAACGGTGATGGCAATTCTTGGTCCTGTTGAAGTGGTTGATGATGTAACTGGTGGGTTGAAACTCTTGTAG

Protein sequence

MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL

Homology

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BLAST of CmaCh02G004640 vs. Swiss-Prot
Match: PTH2_HUMAN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.9e-30
Identity = 81/176 (46.02%), Postives = 105/176 (59.66%), Query Frame = 1


Query: 9   IVVGAGC-LVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENLADILED- 68
           + VG  C + LG+ +R  +         L KS  S         K   + E+ A IL D 
Sbjct: 19  LAVGVACGMCLGWSLRVCF-------GMLPKSKTS---------KTHTDTESEASILGDS 78

Query: 69  --FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIES 128
             +KM+LVVRNDLKMGKGK+AAQCSHA +  YK++  R P+ L +WE C QPKVV+K   
Sbjct: 79  GEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPD 138

Query: 129 EEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDDVTGGLKL 180
           EE ++ L   AK L L   +  DAGRTQIAP S+TV+ I  GP +++D VTG LKL
Sbjct: 139 EETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178

[Close]

BLAST of CmaCh02G004640 vs. Swiss-Prot
Match: PTH2_MOUSE (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-29
Identity = 74/174 (42.53%), Postives = 107/174 (61.49%), Query Frame = 1


Query: 8   AIVVGAGC-LVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENLADILED 67
           ++  G  C + LG+ +RS     +F +   +++N  + +G +          ++     +
Sbjct: 18  SLAAGVACGMCLGWGLRSHLG--MFPQNSTSEANRDTETGTEA---------SILGESGE 77

Query: 68  FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESEE 127
           +KM+LVVR DLKMGKGK+AAQCSHA +  YK+   R+P+ L  WE C QPKVV+K   E+
Sbjct: 78  YKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDED 137

Query: 128 DMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDDVTGGLKL 180
            ++ L   AK+L L   +  DAGRTQI P SRTV+ I  GPVE++D+VTG LKL
Sbjct: 138 TLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180

[Close]

BLAST of CmaCh02G004640 vs. Swiss-Prot
Match: PTH2_BOVIN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.3e-29
Identity = 66/115 (57.39%), Postives = 82/115 (71.30%), Query Frame = 1


Query: 66  DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIESE 125
           ++KM+LVVRNDLKMGKGK+AAQCSHA +  YK++  R P+ L  WE C QPKVV+K   E
Sbjct: 64  EYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDE 123

Query: 126 EDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDDVTGGLKL 180
           E ++ L   AK L L   +  DAGRTQIAP SRTV+ I  GP +++D VTG LKL
Sbjct: 124 ETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178

[Close]

BLAST of CmaCh02G004640 vs. Swiss-Prot
Match: PTH2_DROME (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=2 SV=2)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 60/118 (50.85%), Postives = 83/118 (70.34%), Query Frame = 1


Query: 65  EDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVLKIES 124
           ++FKMVLVVRNDLKMGKGKIAAQC H  +G Y++   R P+ L  WE C   K+ +++ES
Sbjct: 70  DNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVES 129

Query: 125 EEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEV--VDDVTGGLKLL 181
           E +++ +++ A+  +L T +  DAGRTQI  NS+TV+A+ GP     +D VTG LKLL
Sbjct: 130 EAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAV-GPAAAADIDRVTGHLKLL 186

[Close]

BLAST of CmaCh02G004640 vs. Swiss-Prot
Match: PTH2_SCHPO (Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC19A8.14 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.1e-22
Identity = 77/198 (38.89%), Postives = 105/198 (53.03%), Query Frame = 1


Query: 7   SAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKE--PLEIEN----- 66
           +A++VGA   V+G+ I  KY       A  ++   S  + K   P++  P+ + N     
Sbjct: 15  AAVLVGA---VVGFMIGRKYSV-----ADASRGYSSKNANKASNPEKESPVSVSNDEDSE 74

Query: 67  ----LADILE-------------DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYR 126
               L D+L+               KMVLVVR DL M KGKIAAQC+HA L  YK     
Sbjct: 75  SETELLDMLKGNSSLAALALAEGQTKMVLVVRTDLGMTKGKIAAQCAHAALACYKIASAV 134

Query: 127 APKALNRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMA 180
            P  +  WE   Q K+ L+ ++EE + +LQ +A SL L   +  DAGRTQIA  S TV+ 
Sbjct: 135 DPDLVRIWENAGQAKITLQAQTEETLELLQAQAMSLGLCARVIHDAGRTQIASGSATVLG 194

[Close]

BLAST of CmaCh02G004640 vs. TrEMBL
Match: A0A0A0LTR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437060 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.8e-88
Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKK-GKPKEPLEIEN 60
           MDL WLSAIVVGAGCLVLGY I SKYPPR+F+KAKLAKSNESSR+GKK  K KEPLE+EN
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60

Query: 61  LADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

[Close]

BLAST of CmaCh02G004640 vs. TrEMBL
Match: A0A067JD80_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00549 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.6e-77
Identity = 152/180 (84.44%), Postives = 162/180 (90.00%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENL 60
           MDL WLSAI+VGAGCL LGYCI S+ P  IF++AK+ K     +  +K K KEPLEIE L
Sbjct: 1   MDLGWLSAILVGAGCLALGYCIGSRRPAFIFLRAKVVKDANFGKGNEKKKSKEPLEIEKL 60

Query: 61  ADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVL 120
           ADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL +RAPKALNRWEMCAQPKVV+
Sbjct: 61  ADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCAQPKVVV 120

Query: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
           KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL
Sbjct: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180

[Close]

BLAST of CmaCh02G004640 vs. TrEMBL
Match: V4VTH6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022485mg PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.5e-75
Identity = 148/180 (82.22%), Postives = 156/180 (86.67%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENL 60
           MDL+WLS I+ GAGCL  GYCI    P   F+  + AK+   +   KK K KEPLEIE L
Sbjct: 2   MDLSWLSTILFGAGCLAFGYCIGKGCPACFFVSVRRAKNAAVANENKKNKAKEPLEIEKL 61

Query: 61  ADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVL 120
           ADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK+ YRAPKALNRWEMCAQPKVVL
Sbjct: 62  ADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKVLYRAPKALNRWEMCAQPKVVL 121

Query: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
           KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL
Sbjct: 122 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 181

[Close]

BLAST of CmaCh02G004640 vs. TrEMBL
Match: A0A067E074_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030232mg PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.5e-75
Identity = 148/180 (82.22%), Postives = 156/180 (86.67%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENL 60
           MDL+WLS I+ GAGCL  GYCI    P   F+  + AK+   +   KK K KEPLEIE L
Sbjct: 2   MDLSWLSTILFGAGCLAFGYCIGKGCPACFFVSVRRAKNAAVANENKKNKAKEPLEIEKL 61

Query: 61  ADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVL 120
           ADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK+ YRAPKALNRWEMCAQPKVVL
Sbjct: 62  ADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKVLYRAPKALNRWEMCAQPKVVL 121

Query: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
           KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL
Sbjct: 122 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 181

[Close]

BLAST of CmaCh02G004640 vs. TrEMBL
Match: U5FER7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s07680g PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.6e-75
Identity = 153/186 (82.26%), Postives = 162/186 (87.10%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIK-----AKLAKSNESSRSG-KKGKPKEP 60
           MDL WLSAI+VGAGCL LGYCI ++ P  IF++      K  K+N SS  G KK K KEP
Sbjct: 1   MDLNWLSAILVGAGCLALGYCIGTRCPSFIFLRLTPKVVKDTKTNPSSHHGNKKNKSKEP 60

Query: 61  LEIENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCA 120
            EI+ LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKALNRWEMCA
Sbjct: 61  FEIDKLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLNRAPKALNRWEMCA 120

Query: 121 QPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVT 180
           QPKVV+KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVT
Sbjct: 121 QPKVVVKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVT 180

[Close]

BLAST of CmaCh02G004640 vs. TAIR10
Match: AT3G03010.1 (AT3G03010.1 Peptidyl-tRNA hydrolase II (PTH2) family protein)

HSP 1 Score: 246.9 bits (629), Expect = 9.5e-66
Identity = 134/182 (73.63%), Postives = 150/182 (82.42%), Query Frame = 1


Query: 1   MDLTWL-SAIVVGAGCLVLGYCIRS-KYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIE 60
           MDL WL S ++VGA    LGY I + +   RIF+ +K    +  S   KK K KEPLEIE
Sbjct: 1   MDLVWLLSVLLVGAA---LGYYISTLRQTRRIFLSSKSVAIDAGSSGNKKTKSKEPLEIE 60

Query: 61  NLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKV 120
            LAD  ++FKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKALNRWE CAQPKV
Sbjct: 61  KLADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKV 120

Query: 121 VLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLK 180
           V+KIESEE+MLVLQERAK+LKLPTHITIDAG+TQIAPNSRTVMAILGPV+ VD+VTGGLK
Sbjct: 121 VVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAILGPVDNVDEVTGGLK 179

[Close]

BLAST of CmaCh02G004640 vs. TAIR10
Match: AT5G16870.1 (AT5G16870.1 Peptidyl-tRNA hydrolase II (PTH2) family protein)

HSP 1 Score: 246.1 bits (627), Expect = 1.6e-65
Identity = 133/180 (73.89%), Postives = 146/180 (81.11%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENL 60
           MDLTWLSA++VGA    LGYCI ++    +          +SS+S        PLEIE L
Sbjct: 1   MDLTWLSALIVGAA---LGYCIGTRRSKPVVAAVDKDIKTQSSKS--------PLEIEKL 60

Query: 61  ADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVL 120
           ADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL  RAPKAL+ WE CAQPKVV+
Sbjct: 61  ADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVVV 120

Query: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
           KIE E++ML LQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVD+VTGGLKLL
Sbjct: 121 KIEDEDEMLELQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDEVTGGLKLL 169

[Close]

BLAST of CmaCh02G004640 vs. TAIR10
Match: AT4G32900.2 (AT4G32900.2 Peptidyl-tRNA hydrolase II (PTH2) family protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 1


Query: 33  KAKLAKSNESSRSGKKGKPKEPLEIENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHAT 92
           +++L  S    +S   G  K+           ++ KMVLVVR DLKM  GKIA+QC+HA 
Sbjct: 56  RSRLLSSKVQKQSSVPGNGKD-----------QELKMVLVVRQDLKMRTGKIASQCAHAA 115

Query: 93  LGLYKKLHYRAPKALNRWEMCAQPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQ 152
            G+Y +L       L RWE   QPK+V+  +++++M  + E A+S+ LPT +  DAGRT+
Sbjct: 116 TGMYAELMQSDRYLLRRWEENGQPKIVVTCKNQQEMNKITEAAESVGLPTFVVADAGRTE 175

Query: 153 IAPNSRTVMAI-LGPVEVVDDVTGGLKLL 181
           +A  SRTV+A+  GP E+VD +TG L LL
Sbjct: 176 VAAGSRTVLAVGPGPKELVDSITGRLALL 193

[Close]

BLAST of CmaCh02G004640 vs. NCBI nr
Match: gi|449460720|ref|XP_004148093.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 331.6 bits (849), Expect = 8.3e-88
Identity = 170/181 (93.92%), Postives = 175/181 (96.69%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKK-GKPKEPLEIEN 60
           MDL WLSAIVVGAGCLVLGY I SKYPPR+F+KAKLAKSNESSR+GKK  K KEPLE+EN
Sbjct: 1   MDLAWLSAIVVGAGCLVLGYYIGSKYPPRVFVKAKLAKSNESSRNGKKKDKTKEPLEVEN 60

Query: 61  LADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120
           LADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV
Sbjct: 61  LADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVV 120

Query: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180
           LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL
Sbjct: 121 LKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKL 180

[Close]

BLAST of CmaCh02G004640 vs. NCBI nr
Match: gi|802777489|ref|XP_012090900.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Jatropha curcas])

HSP 1 Score: 297.0 bits (759), Expect = 2.3e-77
Identity = 152/180 (84.44%), Postives = 162/180 (90.00%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENL 60
           MDL WLSAI+VGAGCL LGYCI S+ P  IF++AK+ K     +  +K K KEPLEIE L
Sbjct: 1   MDLGWLSAILVGAGCLALGYCIGSRRPAFIFLRAKVVKDANFGKGNEKKKSKEPLEIEKL 60

Query: 61  ADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVL 120
           ADIL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL +RAPKALNRWEMCAQPKVV+
Sbjct: 61  ADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCAQPKVVV 120

Query: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
           KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL
Sbjct: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180

[Close]

BLAST of CmaCh02G004640 vs. NCBI nr
Match: gi|1009123393|ref|XP_015878517.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 292.7 bits (748), Expect = 4.3e-76
Identity = 150/186 (80.65%), Postives = 163/186 (87.63%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSN------ESSRSGKKGKPKEP 60
           MDL+WLSAI+VGAGCL LGYCI +++P  IFI A LAK N       S     K +PK+P
Sbjct: 1   MDLSWLSAILVGAGCLALGYCIGARFPAPIFISASLAKGNALVSDSSSGNRNNKDRPKDP 60

Query: 61  LEIENLADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCA 120
           LEIE LAD+L+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKL +RAPKALNRWEMCA
Sbjct: 61  LEIEKLADLLDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLHRAPKALNRWEMCA 120

Query: 121 QPKVVLKIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVT 180
           QPKVV+KIESEEDMLVLQ RAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPV++VDDVT
Sbjct: 121 QPKVVVKIESEEDMLVLQGRAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVDMVDDVT 180

[Close]

BLAST of CmaCh02G004640 vs. NCBI nr
Match: gi|1021489816|ref|XP_016187918.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Arachis ipaensis])

HSP 1 Score: 292.7 bits (748), Expect = 4.3e-76
Identity = 150/180 (83.33%), Postives = 160/180 (88.89%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENL 60
           M+LTWLSAI+VGAG L LGY I SKYPPR    +KL+  N +  S  K KPKE LEIE L
Sbjct: 1   MELTWLSAIIVGAGYLALGYFIGSKYPPRFLFSSKLSIDNTNRNSNTKSKPKESLEIEQL 60

Query: 61  ADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVL 120
           A+IL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK+ +RAPKALNRWEMCAQPKVV+
Sbjct: 61  ANILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKVLHRAPKALNRWEMCAQPKVVV 120

Query: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
           KIESEEDML LQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL
Sbjct: 121 KIESEEDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180

[Close]

BLAST of CmaCh02G004640 vs. NCBI nr
Match: gi|1012033893|ref|XP_015952677.1| (PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Arachis duranensis])

HSP 1 Score: 292.0 bits (746), Expect = 7.3e-76
Identity = 150/180 (83.33%), Postives = 159/180 (88.33%), Query Frame = 1


Query: 1   MDLTWLSAIVVGAGCLVLGYCIRSKYPPRIFIKAKLAKSNESSRSGKKGKPKEPLEIENL 60
           M+LTWLSAI+VGAG L LGY I SKYPPR     KL+  N +  S  K KPKE LEIE L
Sbjct: 1   MELTWLSAIIVGAGYLALGYFIGSKYPPRFLFSPKLSIDNTNRNSNTKSKPKESLEIEQL 60

Query: 61  ADILEDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLHYRAPKALNRWEMCAQPKVVL 120
           A+IL+DFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKK+ +RAPKALNRWEMCAQPKVV+
Sbjct: 61  ANILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKVLHRAPKALNRWEMCAQPKVVV 120

Query: 121 KIESEEDMLVLQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180
           KIESEEDML LQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL
Sbjct: 121 KIESEEDMLALQERAKSLKLPTHITIDAGRTQIAPNSRTVMAILGPVEVVDDVTGGLKLL 180

The following BLAST results are available for this feature:

BLAST of CmaCh02G004640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PTH2_HUMAN	7.9e-30	46.02	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens GN=PTRH2 PE=1 SV=1	[more]
PTH2_MOUSE	1.8e-29	42.53	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus GN=Ptrh2 PE=1 SV=1	[more]
PTH2_BOVIN	2.3e-29	57.39	Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus GN=PTRH2 PE=2 SV=1	[more]
PTH2_DROME	1.2e-25	50.85	Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster GN=CG1307 PE=2 SV=...	[more]
PTH2_SCHPO	6.1e-22	38.89	Probable peptidyl-tRNA hydrolase 2 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of CmaCh02G004640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTR6_CUCSA	5.8e-88	93.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G437060 PE=4 SV=1	[more]
A0A067JD80_JATCU	1.6e-77	84.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00549 PE=4 SV=1	[more]
V4VTH6_9ROSI	2.5e-75	82.22	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022485mg PE=4 SV=1	[more]
A0A067E074_CITSI	2.5e-75	82.22	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g030232mg PE=4 SV=1	[more]
U5FER7_POPTR	5.6e-75	82.26	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s07680g PE=4 SV=1	[more]

BLAST of CmaCh02G004640 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03010.1	9.5e-66	73.63	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT5G16870.1	1.6e-65	73.89	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]
AT4G32900.2	1.1e-24	42.28	Peptidyl-tRNA hydrolase II (PTH2) family protein	[more]

BLAST of CmaCh02G004640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460720\|ref\|XP_004148093.1\|	8.3e-88	93.92	PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis sativus]	[more]
gi\|802777489\|ref\|XP_012090900.1\|	2.3e-77	84.44	PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Jatropha curcas]	[more]
gi\|1009123393\|ref\|XP_015878517.1\|	4.3e-76	80.65	PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Ziziphus jujuba]	[more]
gi\|1021489816\|ref\|XP_016187918.1\|	4.3e-76	83.33	PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Arachis ipaensis]	[more]
gi\|1012033893\|ref\|XP_015952677.1\|	7.3e-76	83.33	PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002833	PTH2
IPR023476	Pep_tRNA_hydro_II_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0004045	aminoacyl-tRNA hydrolase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004045	aminoacyl-tRNA hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G004640.1	CmaCh02G004640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002833	Peptidyl-tRNA hydrolase, PTH2	PFAM	PF01981	PTH2	coord: 68..180 score: 3.4
IPR002833	Peptidyl-tRNA hydrolase, PTH2	TIGRFAMs	TIGR00283	TIGR00283	coord: 68..180 score: 1.6
IPR023476	Peptidyl-tRNA hydrolase II domain	GENE3D	G3DSA:3.40.1490.10		coord: 64..180 score: 1.8
IPR023476	Peptidyl-tRNA hydrolase II domain	unknown	SSF102462	Peptidyl-tRNA hydrolase II	coord: 66..180 score: 5.23
None	No IPR available	PANTHER	PTHR12649	PEPTIDYL-TRNA HYDROLASE 2	coord: 1..180 score: 3.0E
None	No IPR available	PANTHER	PTHR12649:SF11	PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL	coord: 1..180 score: 3.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G004640	Csa2G437060	Cucumber (Chinese Long) v2	cmacuB590
CmaCh02G004640	ClCG09G016880	Watermelon (Charleston Gray)	cmawcgB510
CmaCh02G004640	CSPI02G27710	Wild cucumber (PI 183967)	cmacpiB595
CmaCh02G004640	CmoCh20G009320	Cucurbita moschata (Rifu)	cmacmoB606
CmaCh02G004640	CmoCh02G004710	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G004640	Lsi10G002540	Bottle gourd (USVL1VR-Ls)	cmalsiB548
CmaCh02G004640	Cp4.1LG16g01790	Cucurbita pepo (Zucchini)	cmacpeB626
CmaCh02G004640	Cp4.1LG05g12010	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G004640	CsaV3_2G036370	Cucumber (Chinese Long) v3	cmacucB0703
CmaCh02G004640	Cla97C09G178440	Watermelon (97103) v2	cmawmbB663
CmaCh02G004640	Bhi10G001306	Wax gourd	cmawgoB0764
CmaCh02G004640	CsGy2G027150	Cucumber (Gy14) v2	cgybcmaB231
CmaCh02G004640	Carg24038	Silver-seed gourd	carcmaB1460

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh02G004640	CmaCh20G009260	Cucurbita maxima (Rimu)	cmacmaB469

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G004640	Melon (DHL92) v3.6.1	cmamedB614
CmaCh02G004640	Melon (DHL92) v3.6.1	cmamedB616
CmaCh02G004640	Cucumber (Gy14) v1	cgycmaB0882
CmaCh02G004640	Melon (DHL92) v3.5.1	cmameB534
CmaCh02G004640	Watermelon (97103) v1	cmawmB549