CmaCh02G003980 (gene) Cucurbita maxima (Rimu)

NameCmaCh02G003980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr02 : 2013007 .. 2016009 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGAAATCGGACGCAGAGAAGCAGAGCCTGAAGAAATGGCCGCAACTCCACACGCAGAAACCCAGATTTTGAAGGTTCAAGGGTTCTTGAGGCCAGCTTCTTCATCCCTTTCTGTTTTATTTTCATTCTTAGTAGTTTTTCTATGGGTCCAAATTCAGAGCTGAATCAATGGATTCTACAAAAAATTTCACGTGTATGCTTCTGCTACAAAACCCCCTTTTGTTTTCTTTTCAATTTTTCATCTCTGCAAAATTTTCCCTCTTTCCCATGTTGCTTTAAATAGTAATCGCTTTGTGTTCTTCTTGCACTGTTGATATATCTTTGATGTGTCCTATCCTGAACAACGTTCCAAGCAAGGCTAGCTGGCCAAACGAGTCTGTACAATGATTGCCTTGTATGTGTATGAAGAAATGCCTGGTTCCCATTTCCTCTTTGTTGGGGGTTTCTTAGCCATTGATATCTTACCAAGTGAATTCATGTTTTTTCCCTGTTGTTTTCCATCATTGTCATAGATATTTGAACCTTAATTCTCTAAGCAATTTGCTTGGCTGTATTATCATCTTACATTGGAATTAGAACACTAGGTTAGGAGTGTGAAAGTCCAAGCATGTTAGAGCCATGATAAACAATGAACTGATGGTTAATAACTAGAAGTTGGTATATCGATTGCTGGTTAAACCTTGTGAATTACAGATTTTCCAAATGAGTTTCTGGATAATCCCAACAGTTAATGGTATATGGATTGCTCGCACGCCTATAAACGAGATGGGAGAACGAGCATTAACCCGATGAAAAGGATGAAATTGTATTGGTTCTTCGATCAGGATGAAATATTTCTTGATATCAAGCATATCCCTGATGACCCTTTTGTTTTGTTTTGTTGGAACTGTTTCTGAATGGTGTTATTGCAGTCACCAAGATTGGCTCATATGCTTTTGCCTGTTTATCCTTCCTTCATGTAAGTTTTTAAGGGTCCACAGCTATGTATTCCCCTTGCTATATTTGGTTATTTTTATGTGAATAAATAGTGACATTTATTTTACTGGTTCCAGCTAGAAGATATGGTTGAGCTTTGGCTGGCCCATTTTATGTGTCTCAAGCTTCAATATTCAAAGTATGTATAATCATATTCCGACTAGTATCATGATATGTTTTTCAACTTAAATGCGATGTAGAATCTTTGTTGTCCTAGATGCAAAGGATTGTTACGGCCCAGCTGAATTCTTTTGTCTGCTCTTACTTTTCTTTTGTTACAAAAGATACTTGATCAGGGGACCTAGTTTTTGTTTCTAATCGAGACGATATAGCATTGACAAAGTTATTGTTTTGGGATACTGTCGAAATACTTAGAATTCATTAAGAACAATCGATTCTCTTGTATAAGTATTGATTGGTGAAGTTCTACACTATCCAGCTACGGTGTTTTACATGTCGAGTCGATAAGACTCATGTTAGACATACTCTAAGAAAGCATCTGATAACATAAGATAGCAGAATGACCCCACTATTTGAGCGTAGCTCGACTAGTGATGATATATATCTTCGACAAGAGGTCAAAGGTTTGAATCCTCCACTCTTACACATTGTTGAACTCAAGTTATTAGTTTGCAATGGATGTAATGGAATCTCGAGTTACGCATTGTAGTCAAGTTCATTGCTTGATTATTACTTACATGTAATGGAATATGTGCACGCAGATACACCCTCGGTTGACATTAAGAATCCTTATCAAGTATTGTCCTAATCCCTTTTCACATGAAAATAATACTGATATCAATTCTATTGAGGATTGCTGGGAGAAGAATCCCACATTGGTTAATTAAGAGGTTGATCATGGGTTTGTAAGTAAGGAATACATTTTCATTGGTATGAGACCCAAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACTATTGTGGAGGTTTGTGATTCCTAATATGGTATTGAGTCATGCCCTTAACTTAGTCATGTCAATAGAATCCTTAAATGTCGAACAAAGAAGTTGTGAGTCCTGAAGGTATAGTAAGAAGTGACTTAAATATTGAATAAATGATGTATTTTGTTCGAGGGCTCTAGAGAAAGGAGTTGAGCCTCAATTAAGGGGAGGTTGTTCAAAGGCTCCATAAGCCTCAGGGAGGCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTAAGGATTGTTGGTAGAGGAGTCCTACATCGGCTAATTAAGAGGTTGATCCTGAGTTTAAAAGTAAGGAATACATCTTCATTAGTATGAGGCATTTTAGGGAAACCAAAAGTGAAGCCATAAAAGCTTATATTCAAATTGGACAATATCATACCATTGTGAAGATTTGTGATTCCTAACAAATTCCTTCCATCTTTGGGATTGTTATGCTACAAAGTGGTCCTCATCCTAGAGTCATAGAAAGATTCCATCATGTTTGACTGCTGTTCTATGGGTGAATGTGAATATGCATAGTTTGTTTAGTTCCCAAAGGGTGGTGTAAAGGTTGCATATTCAATTGCTAAGATGCGATGCATGGCTTTTGTATTCATTGCACCCTAGTTGCTTGGAAGAAATGGACAAGAATCATGAACTTTATGGAGAGAAGAAGAATTGCACCGTCCAAACCTAGTTGGATGGTCCAAAGGCGTCTTCAAAAGAATAAAACTAACTTATTACACGGAATCTTACGAGCAGGTTGGCTTTTGAATTCCGAGTTGTTTGCTTTGTTTTTCTCCAAGATTATGCTGGTGAAGTTAAAGAAATAGAAAAGGTCAGTGCAAAGTCCATTTTGGTCTGCTTGAATTAACTTCTGATATAATCTCATGCTGCTTATATATATTCCAGTGCTGAGAAAAAGAACGTGAACCCACTGGGCGCTCGTGATGTGGCACAGGGATTCGCCTCTTCCTGCTCATTAGTTTTGGTATAATTTCAAGACATTTTATTCATTTCTTTATTATTAACAGCTGCAGAGTTATTGGTTTGGCCTATAT

mRNA sequence

ATGCAAGAAATCGGACGCAGAGAAGCAGAGCCTGAAGAAATGGCCGCAACTCCACACGCAGAAACCCAGATTTTGAAGATTTTCCAAATGAGTTTCTGGATAATCCCAACAGTTAATGTCACCAAGATTGGCTCATATGCTTTTGCCTGTTTATCCTTCCTTCATCTAGAAGATATGGTTGAGCTTTGGCTGGCCCATTTTATGTGTCTCAAGCTTCAATATTCAAAGTTGGCTTTTGAATTCCGAGTTGTTTGCTTTGTTTTTCTCCAAGATTATGCTGGTGAAGTTAAAGAAATAGAAAAGTGCTGAGAAAAAGAACGTGAACCCACTGGGCGCTCGTGATGTGGCACAGGGATTCGCCTCTTCCTGCTCATTAGTTTTGGTATAATTTCAAGACATTTTATTCATTTCTTTATTATTAACAGCTGCAGAGTTATTGGTTTGGCCTATAT

Coding sequence (CDS)

ATGCAAGAAATCGGACGCAGAGAAGCAGAGCCTGAAGAAATGGCCGCAACTCCACACGCAGAAACCCAGATTTTGAAGATTTTCCAAATGAGTTTCTGGATAATCCCAACAGTTAATGTCACCAAGATTGGCTCATATGCTTTTGCCTGTTTATCCTTCCTTCATCTAGAAGATATGGTTGAGCTTTGGCTGGCCCATTTTATGTGTCTCAAGCTTCAATATTCAAAGTTGGCTTTTGAATTCCGAGTTGTTTGCTTTGTTTTTCTCCAAGATTATGCTGGTGAAGTTAAAGAAATAGAAAAGTGCTGA

Protein sequence

MQEIGRREAEPEEMAATPHAETQILKIFQMSFWIIPTVNVTKIGSYAFACLSFLHLEDMVELWLAHFMCLKLQYSKLAFEFRVVCFVFLQDYAGEVKEIEKC
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh02G003980.1CmaCh02G003980.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh02G003980Cp4.1LG05g12650Cucurbita pepo (Zucchini)cmacpeB646
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh02G003980Cucurbita pepo (Zucchini)cmacpeB616
CmaCh02G003980Cucurbita pepo (Zucchini)cmacpeB626
CmaCh02G003980Bottle gourd (USVL1VR-Ls)cmalsiB548
CmaCh02G003980Bottle gourd (USVL1VR-Ls)cmalsiB562
CmaCh02G003980Bottle gourd (USVL1VR-Ls)cmalsiB577
CmaCh02G003980Cucumber (Gy14) v2cgybcmaB229
CmaCh02G003980Melon (DHL92) v3.6.1cmamedB628
CmaCh02G003980Melon (DHL92) v3.6.1cmamedB643
CmaCh02G003980Silver-seed gourdcarcmaB0239
CmaCh02G003980Silver-seed gourdcarcmaB0442
CmaCh02G003980Silver-seed gourdcarcmaB1233
CmaCh02G003980Cucumber (Chinese Long) v3cmacucB0701
CmaCh02G003980Cucumber (Chinese Long) v3cmacucB0724
CmaCh02G003980Watermelon (97103) v2cmawmbB613
CmaCh02G003980Watermelon (97103) v2cmawmbB619
CmaCh02G003980Wax gourdcmawgoB0739
CmaCh02G003980Wax gourdcmawgoB0745
CmaCh02G003980Cucurbita maxima (Rimu)cmacmaB060
CmaCh02G003980Cucurbita maxima (Rimu)cmacmaB160
CmaCh02G003980Cucurbita maxima (Rimu)cmacmaB469
CmaCh02G003980Cucurbita maxima (Rimu)cmacmaB452
CmaCh02G003980Cucumber (Gy14) v1cgycmaB0254
CmaCh02G003980Cucurbita moschata (Rifu)cmacmoB599
CmaCh02G003980Cucurbita moschata (Rifu)cmacmoB606
CmaCh02G003980Cucurbita moschata (Rifu)cmacmoB619
CmaCh02G003980Wild cucumber (PI 183967)cmacpiB593
CmaCh02G003980Cucumber (Chinese Long) v2cmacuB588
CmaCh02G003980Melon (DHL92) v3.5.1cmameB549
CmaCh02G003980Melon (DHL92) v3.5.1cmameB563
CmaCh02G003980Watermelon (Charleston Gray)cmawcgB517
CmaCh02G003980Watermelon (Charleston Gray)cmawcgB531
CmaCh02G003980Watermelon (97103) v1cmawmB586
CmaCh02G003980Watermelon (97103) v1cmawmB610