CmaCh02G003890 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G003890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SNF1-related kinase regulatory subunit gamma 1
Location	Cma_Chr02 : 1971457 .. 1973887 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTGGAATCAAGTGGCTTGGAGTGGTTTGACAGCATAGTGGACAAAGTTATATCGAAGTTTCGGTAAGGAACATCACACCATCACATGAATAACAGATTGATCTATATGGAATTGAATAACATAATTGCTTCCTTTTCCTTTCTTGATCATTGTCAATTCAGGTTTCATAATGAAGAGAATGTTCTTCACGTCTATGGCGATCAAAACATTATGGAAGCCTTTCATTTACTATGGGAGAAACAAATGGGTGCAGTTGCTGTAACAGATAGGGAAAGTAAGAGCCTCATTGGTTGTTTGAGGAACAGCGACACATATCTTCTATTGGAGAAGGAAGATCTATTTCATAATAGAAAGTAAGTTCATTTGAAGCCCTTCTTTGTTTTGATGATCTGAATAAATCCTCACATTCAAAATTTTAAAGACTGAACTTGTAATTTAAACAATAGCATATGGTAAGGATTTAAGCTTAGAGATGCCATTGCCAATGGATCGTTAGTGATGAATTGCAGGAGGCTAACAGTGAAGGAGTTCATGCATATGGAATCGAGTAAAGAACAAGCAGACTCTAACCCAACAGTCAAAGGGGGCCAGAGGGCACTTACCTTGTCGAGCGCTCGTCCTCTAGTTAAGTGCAAAGTTCCAAATATGCACACTCCAGTCACCATCAGGAGAGATGACACTCTGAAGCAAGTGATGAAAACTATGGCAGAAACAAATAGCAGTTTCAGCTTTCTTGTCAATAGTTCCCACCAAGCAACAGGGATACTCACCGTGGGAGACGTAATAACTCAGTTTGCTCCGCCCTGTATGGATTCAACCATTCAAGGAGGCGGTTTTTTTGAATCTGCTCTGGAACATACTGGCTGTCAGATTAGAAATGGAACCTTAATTTGTAACAAAAGATCTTAGATAATGAGCTGAGTTTAACCATCTGAGGAAAATAATGTACCAGAGAAGAGGTGGGGTTGTTCATCTGCATGGTTTCCATTACCTGATTGGTCAAGACTCCACAAATTTCCATCCTATATTGATATTGACAGCTTCGGACTACTGAATGTTGTTCCTCTAACCACTTCAACCATATAATGGTTGTATGTTAGTTTTCTTCCTGGAAAAAGTGAGAAACGCTAAAATCATGTGCAAAAAGTGGTAGCATATATTGAGAAAGAACCACGCAGAATACAAAATCATTCAAAATTATAGAATTGTATACAGGCTCGTTGCTCGTTTCTTTACTGTAAATGGGTGGATGCTCACGTTTGCCTTCAGCCCCAGGAGATACATCGTGAATAATCGAGCACAAAACCATATAAAGGAACCATTCTTCCATTCAGGCAGTGGTGGCAACTGTAACGAGCTTATCCAGAAGCTTAATTTAGCTCTCTAGCAGTTCAAACTACTTGGGTCTGAGTTGATGATGGCCAGGAGTTCGATAGAAATAACTCCATTTCAAGATATCAGTAGTGTCGAAACTTAAGAGGGTTGTCAAATACCCTCGGTATTCCAGACCAGTGAAGATCCTCTTCTGATGAACTCACATGGCTGAAGCCCAGTCACTGTCTTGCCCATCAATGCCATAGCAGCTATACTGGGCATTGGCTTATTTAAAATTGGCCTAGAACATTGTGATTTGTGAACCACAGCAGTTTCAAGATTTCGTTCAGAAGATGTTGATCTATTATGACATAATCTTCGAATCCAGGGACTGGAGAGTATCATTTCTCGATTTTTTAATCTCAAGTTGCTGCACAAGTCACTAGCTTTTACTATAGTAGCCGTTTGGCCAACCGCCAATTGCTCTTGTCCATGGAGTGGACCCCTAGAGCGATCAGAGCTGGTTGAGCTGCGTTTCATTTTATTGAAGAGCTGATTGGCTTTATCACAGGAAGACTCTTCCACCTTTTTCGTGCTCTTTGAGTCATGAACAGACTCTGAAGCGCATGGCCTAAGACGTTTAACCCACCCACTGTCTATCTCCCGTTTAGAAGAGTCATCTGGAGGGACAATGGAATTCAAAAACCTTTGCTGCTCAGCATTTGAAAGGAGGTGTTCTGCATCTAAAGTTTGTGTTTTAGAGGTACTTGACTCCCCGTTTTCCATCAGGCTTGTAGAAGTAGAACGATTGGGTGGCCTTTCGTTTATATTAAGTAATCTTTTCTTCGGCAGCGGACCTCCAATTTGCTTTCTAACCGAACCAGTTGCACTCACAGAGAGCAGTGGTGATTTTGAACTCCTCAACTCCTGCAAATCCCAGAGCCATTTTAGTTCAGTAAAAAACTTCGTAACAGTTGAAAATTCTTCGACATAATCCTCCAATACCATCAATTCCAACGGTAATTAACATGTACGAGGCTTGATGAGCTAACCATCCATTCTGCATTTGTATTTTGATGAACATCCAAGCAAATAAAAGTTTCTATTGGAC

mRNA sequence

ATGCTTCTGGAATCAAGTGGCTTGGAGTGGTTTGACAGCATAGTGGACAAAGTTATATCGAAGTTTCGGTTTCATAATGAAGAGAATGTTCTTCACGTCTATGGCGATCAAAACATTATGGAAGCCTTTCATTTACTATGGGAGAAACAAATGGGTGCAGTTGCTGTAACAGATAGGGAAAGTAAGAGCCTCATTGGTTGTTTGAGGAACAGCGACACATATCTTCTATTGGAGAAGGAAGATCTATTTCATAATAGAAAGAGGCTAACAGTGAAGGAGTTCATGCATATGGAATCGAGTAAAGAACAAGCAGACTCTAACCCAACAGTCAAAGGGGGCCAGAGGGCACTTACCTTGTCGAGCGCTCGTCCTCTAGTTAAGTGCAAAGTTCCAAATATGCACACTCCAGTCACCATCAGGAGAGATGACACTCTGAAGCAAGTGATGAAAACTATGGCAGAAACAAATAGCAGTTTCAGCTTTCTTGTCAATAGTTCCCACCAAGCAACAGGGATACTCACCGTGGGAGACGTAATAACTCAGTTTGCTCCGCCCTGTATGGATTCAACCATTCAAGGAGGCGGTTTTTTTGAATCTGCTCTGGAACATACTGGCTGTCAGATTAGAAATGGAACCTTAATTTGTAACAAAAGATCTTAGATAATGAGCTGAGTTTAACCATCTGAGGAAAATAATGTACCAGAGAAGAGGTGGGGTTGTTCATCTGCATGGTTTCCATTACCTGATTGGTCAAGACTCCACAAATTTCCATCCTATATTGATATTGACAGCTTCGGACTACTGAATGTTGTTCCTCTAACCACTTCAACCATATAATGGTTGTATGTTAGTTTTCTTCCTGGAAAAAGTGAGAAACGCTAAAATCATGTGCAAAAAGTGGTAGCATATATTGAGAAAGAACCACGCAGAATACAAAATCATTCAAAATTATAGAATTGTATACAGGCTCGTTGCTCGTTTCTTTACTGTAAATGGGTGGATGCTCACGTTTGCCTTCAGCCCCAGGAGATACATCGTGAATAATCGAGCACAAAACCATATAAAGGAACCATTCTTCCATTCAGGCAGTGGTGGCAACTGTAACGAGCTTATCCAGAAGCTTAATTTAGCTCTCTAGCAGTTCAAACTACTTGGGTCTGAGTTGATGATGGCCAGGAGTTCGATAGAAATAACTCCATTTCAAGATATCAGTAGTGTCGAAACTTAAGAGGGTTGTCAAATACCCTCGGTATTCCAGACCAGTGAAGATCCTCTTCTGATGAACTCACATGGCTGAAGCCCAGTCACTGTCTTGCCCATCAATGCCATAGCAGCTATACTGGGCATTGGCTTATTTAAAATTGGCCTAGAACATTGTGATTTGTGAACCACAGCAGTTTCAAGATTTCGTTCAGAAGATGTTGATCTATTATGACATAATCTTCGAATCCAGGGACTGGAGAGTATCATTTCTCGATTTTTTAATCTCAAGTTGCTGCACAAGTCACTAGCTTTTACTATAGTAGCCGTTTGGCCAACCGCCAATTGCTCTTGTCCATGGAGTGGACCCCTAGAGCGATCAGAGCTGGTTGAGCTGCGTTTCATTTTATTGAAGAGCTGATTGGCTTTATCACAGGAAGACTCTTCCACCTTTTTCGTGCTCTTTGAGTCATGAACAGACTCTGAAGCGCATGGCCTAAGACGTTTAACCCACCCACTGTCTATCTCCCGTTTAGAAGAGTCATCTGGAGGGACAATGGAATTCAAAAACCTTTGCTGCTCAGCATTTGAAAGGAGGTGTTCTGCATCTAAAGTTTGTGTTTTAGAGGTACTTGACTCCCCGTTTTCCATCAGGCTTGTAGAAGTAGAACGATTGGGTGGCCTTTCGTTTATATTAAGTAATCTTTTCTTCGGCAGCGGACCTCCAATTTGCTTTCTAACCGAACCAGTTGCACTCACAGAGAGCAGTGGTGATTTTGAACTCCTCAACTCCTGCAAATCCCAGAGCCATTTTAGTTCAGTAAAAAACTTCGTAACAGTTGAAAATTCTTCGACATAATCCTCCAATACCATCAATTCCAACGGTAATTAACATGTACGAGGCTTGATGAGCTAACCATCCATTCTGCATTTGTATTTTGATGAACATCCAAGCAAATAAAAGTTTCTATTGGAC

Coding sequence (CDS)

ATGCTTCTGGAATCAAGTGGCTTGGAGTGGTTTGACAGCATAGTGGACAAAGTTATATCGAAGTTTCGGTTTCATAATGAAGAGAATGTTCTTCACGTCTATGGCGATCAAAACATTATGGAAGCCTTTCATTTACTATGGGAGAAACAAATGGGTGCAGTTGCTGTAACAGATAGGGAAAGTAAGAGCCTCATTGGTTGTTTGAGGAACAGCGACACATATCTTCTATTGGAGAAGGAAGATCTATTTCATAATAGAAAGAGGCTAACAGTGAAGGAGTTCATGCATATGGAATCGAGTAAAGAACAAGCAGACTCTAACCCAACAGTCAAAGGGGGCCAGAGGGCACTTACCTTGTCGAGCGCTCGTCCTCTAGTTAAGTGCAAAGTTCCAAATATGCACACTCCAGTCACCATCAGGAGAGATGACACTCTGAAGCAAGTGATGAAAACTATGGCAGAAACAAATAGCAGTTTCAGCTTTCTTGTCAATAGTTCCCACCAAGCAACAGGGATACTCACCGTGGGAGACGTAATAACTCAGTTTGCTCCGCCCTGTATGGATTCAACCATTCAAGGAGGCGGTTTTTTTGAATCTGCTCTGGAACATACTGGCTGTCAGATTAGAAATGGAACCTTAATTTGTAACAAAAGATCTTAG

Protein sequence

MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRESKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLSSARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVITQFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLICNKRS

Homology

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BLAST of CmaCh02G003890 vs. Swiss-Prot
Match: KING1_ARATH (SNF1-related protein kinase regulatory subunit gamma-1 OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 9.3e-09
Identity = 41/186 (22.04%), Postives = 87/186 (46.77%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISK--FRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTD 60
           ML E +GL WF+    K +S+      ++++++ +Y D+ +++AF L+  K++G + V +
Sbjct: 237 MLAECAGLLWFEDWGIKTLSEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPVIE 296

Query: 61  RESKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALT 120
           R S+  +G +   D   LL   +++H+ + +T K F+                       
Sbjct: 297 RNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFL----------------------- 356

Query: 121 LSSARPLVKC---KVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTV 180
           +S    L KC     P M   +   ++ TLK+++  +        ++V+      G++T+
Sbjct: 357 VSVREHLEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITL 399

Query: 181 GDVITQ 182
            D+I +
Sbjct: 417 RDIIAR 399

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BLAST of CmaCh02G003890 vs. TrEMBL
Match: A0A067L009_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26789 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.3e-60
Identity = 116/217 (53.46%), Postives = 156/217 (71.89%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGLEWFD I DK + +FRF +EE V+  YGDQ+I EA H+LWE ++ A+AV +RE
Sbjct: 205 LLLQSSGLEWFDGIADKALFEFRFPSEEQVILTYGDQSIAEALHILWESRIVAIAVINRE 264

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           ++ +IGC  NSD YLLLE ++L  NRK++TV EF+HME+    AD++P ++    AL  +
Sbjct: 265 TEKIIGCFSNSDVYLLLENDELLDNRKKITVAEFIHMETG--NADADPAIEQDLGALFSA 324

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
            A  L    +P MH PVT +R DTLKQ MK +AET  +F FLV+ S +  G+ T+ D+I 
Sbjct: 325 GALCLKSRFLPRMHCPVTAKRSDTLKQTMKKVAETKGNFCFLVDDSQKPIGMFTLRDIII 384

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLICNK 218
           QFAPPC+DS + GGGFFESALE TGCQ++NGT+   K
Sbjct: 385 QFAPPCIDSGVHGGGFFESALEQTGCQVKNGTISTEK 419

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BLAST of CmaCh02G003890 vs. TrEMBL
Match: B9HRL1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s12130g PE=4 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-60
Identity = 120/216 (55.56%), Postives = 157/216 (72.69%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGLEWFDSI DK +S+FRF NEE V  VYGD+++ EA H+L E ++G VAV +RE
Sbjct: 221 LLLQSSGLEWFDSIADKALSEFRFGNEERVDLVYGDRSLAEALHILRESRIGVVAVVNRE 280

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           +K +IGC+RNSD YLLLE  ++  +RKRLT  EF+H E++KE +D   T +    AL  +
Sbjct: 281 NKKVIGCIRNSDVYLLLENNEILGDRKRLTAGEFIHTETAKENSDG--TFERDLGALFAA 340

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
            A  L    +  M +PVT ++ +TLKQ MK +AET   F FLVN + Q  G+LT+ DVI 
Sbjct: 341 GALQLRNNFLTKMDSPVTTKKSNTLKQAMKDLAETKGCFCFLVNDAQQPAGLLTLRDVII 400

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLICN 217
           QFAPPC+DS I GGGFFESALE TGCQ++NGT+IC+
Sbjct: 401 QFAPPCIDSNIHGGGFFESALEQTGCQVKNGTVICD 434

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BLAST of CmaCh02G003890 vs. TrEMBL
Match: B9RH65_RICCO (AMP-activated protein kinase, gamma regulatory subunit, putative OS=Ricinus communis GN=RCOM_1447510 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 114/216 (52.78%), Postives = 160/216 (74.07%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGL WFD I DK +S+FRF +E  V+ +Y +Q++ EA  +LWE ++GAVAV +RE
Sbjct: 213 LLLQSSGLGWFDGIADKALSEFRFESEVRVVILYSNQSLAEALSMLWESRIGAVAVVNRE 272

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           ++ +IGCLRNSD YLLLE  +L ++RK LT++EF+HME++K+  D  PTV     A   +
Sbjct: 273 TEKIIGCLRNSDVYLLLEHHELLNDRKSLTMREFIHMETAKDNVD--PTVDQDLGAFLSA 332

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
               L    +P M+ PVT RR +TLKQVM  + ET SS  FL++ S + TG+LT+ D+I 
Sbjct: 333 GVLRLRSSVLPRMYAPVTARRSNTLKQVMYMLTETKSSHCFLLDDSQRPTGMLTLRDIII 392

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLICN 217
           QFAPPC+DS+I+GGGFFESALE TGCQ+++GT++C+
Sbjct: 393 QFAPPCIDSSIRGGGFFESALEQTGCQVKDGTIVCD 426

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BLAST of CmaCh02G003890 vs. TrEMBL
Match: M5W341_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024965mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 123/214 (57.48%), Postives = 160/214 (74.77%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGL+WFDSI DK +S+FRF NEE+VLHVYGDQ++ EA H+LW+ Q GAVAVTDR+
Sbjct: 205 LLLQSSGLDWFDSIADKPLSEFRFGNEEHVLHVYGDQSMTEALHVLWKSQNGAVAVTDRK 264

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           SK +IG +R  D YLLLE  +L  N K LTV+EF+HME+   +  S+PT +    AL  +
Sbjct: 265 SKRVIGSIRKCDIYLLLE--NLPRNIKSLTVEEFIHMEND-HKTGSDPTTERDIGALLSA 324

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
               L     P M +PVT ++ +TLKQ M+ MA+T SSFSFLV+ S+QATG+LT+ D+I 
Sbjct: 325 GFLRLKNNFAPRMDSPVTNKKTETLKQAMRNMADTKSSFSFLVDESNQATGMLTLRDMII 384

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLI 215
            FAPPC+DS+I G GFFESALE TGC ++NGT+I
Sbjct: 385 HFAPPCIDSSIHGCGFFESALEQTGCHVKNGTII 415

[Close]

BLAST of CmaCh02G003890 vs. TrEMBL
Match: M5VNP6_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022050mg PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.1e-59
Identity = 123/214 (57.48%), Postives = 160/214 (74.77%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGL+WFDSI DK +S+FRF NEE+VLHVYGDQ++ EA H+LW+ Q GAVAVTDR+
Sbjct: 168 LLLQSSGLDWFDSIADKPLSEFRFGNEEHVLHVYGDQSMTEALHVLWKSQNGAVAVTDRK 227

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           SK +IG +R  D YLLLE  +L  N K LTV+EF+HME+   +  S+PT +    AL  +
Sbjct: 228 SKRVIGSIRKCDIYLLLE--NLPRNIKSLTVEEFIHMEND-HKTGSDPTTERDIGALLSA 287

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
               L     P M +PVT ++ +TLKQ M+ MA+T SSFSFLV+ S+QATG+LT+ D+I 
Sbjct: 288 GFLRLKNNFAPRMDSPVTNKKTETLKQAMRNMADTKSSFSFLVDESNQATGMLTLRDMII 347

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLI 215
            FAPPC+DS+I G GFFESALE TGC ++NGT+I
Sbjct: 348 HFAPPCIDSSIHGCGFFESALEQTGCHVKNGTII 378

[Close]

BLAST of CmaCh02G003890 vs. TAIR10
Match: AT3G48530.1 (AT3G48530.1 SNF1-related protein kinase regulatory subunit gamma 1)

HSP 1 Score: 62.0 bits (149), Expect = 5.3e-10
Identity = 41/186 (22.04%), Postives = 87/186 (46.77%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISK--FRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTD 60
           ML E +GL WF+    K +S+      ++++++ +Y D+ +++AF L+  K++G + V +
Sbjct: 237 MLAECAGLLWFEDWGIKTLSEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPVIE 296

Query: 61  RESKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALT 120
           R S+  +G +   D   LL   +++H+ + +T K F+                       
Sbjct: 297 RNSEKPVGNISLRDVQFLLTAPEIYHDYRSITTKNFL----------------------- 356

Query: 121 LSSARPLVKC---KVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTV 180
           +S    L KC     P M   +   ++ TLK+++  +        ++V+      G++T+
Sbjct: 357 VSVREHLEKCGDTSAPIMSGVIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITL 399

Query: 181 GDVITQ 182
            D+I +
Sbjct: 417 RDIIAR 399

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BLAST of CmaCh02G003890 vs. NCBI nr
Match: gi|778674167|ref|XP_011650151.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 8.3e-82
Identity = 152/197 (77.16%), Postives = 173/197 (87.82%), Query Frame = 1


Query: 21  KFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRESKSLIGCLRNSDTYLLLEKE 80
           +FRF NEE+VLHVYGDQNI+EAFH+LW KQ+GAVAVTDR SK+LIGCLR SD YLLLEKE
Sbjct: 208 QFRFDNEEHVLHVYGDQNIIEAFHILWNKQIGAVAVTDRGSKTLIGCLRKSDAYLLLEKE 267

Query: 81  DLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLSSARPLVKCKVPNMHTPVTIR 140
           DLF NRKR+TVKEF+HME +K + D+  TV+G Q ALTLS AR L+  K+PNMHTPVT +
Sbjct: 268 DLFQNRKRITVKEFIHMEPNKGRVDAKITVEGSQGALTLSGARSLINGKLPNMHTPVTNK 327

Query: 141 RDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVITQFAPPCMDSTIQGGGFFESA 200
           RDDTLKQVMKTM ETNSSFSFLVN+  QATGILT+ D+ITQFAPPCM+STIQGG FFESA
Sbjct: 328 RDDTLKQVMKTMVETNSSFSFLVNNLQQATGILTLRDMITQFAPPCMNSTIQGGSFFESA 387

Query: 201 LEHTGCQIRNGTLICNK 218
           LE TGCQ+RNGT+ICNK
Sbjct: 388 LEQTGCQVRNGTIICNK 404

[Close]

BLAST of CmaCh02G003890 vs. NCBI nr
Match: gi|802564157|ref|XP_012067247.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Jatropha curcas])

HSP 1 Score: 245.4 bits (625), Expect = 9.5e-62
Identity = 116/216 (53.70%), Postives = 158/216 (73.15%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGLEWFD I DK + +FRF +EE V+  YGDQ+I EA H+LWE ++ A+AV +RE
Sbjct: 199 LLLQSSGLEWFDGIADKALFEFRFPSEEQVILTYGDQSIAEALHILWESRIVAIAVINRE 258

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           ++ +IGC  NSD YLLLE ++L  NRK++TV EF+HME+    AD++P ++    AL  +
Sbjct: 259 TEKIIGCFSNSDVYLLLENDELLDNRKKITVAEFIHMETG--NADADPAIEQDLGALFSA 318

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
            A  L    +P MH PVT +R DTLKQ MK +AET  +F FLV+ S +  G+ T+ D+I 
Sbjct: 319 GALCLKSRFLPRMHCPVTAKRSDTLKQTMKKVAETKGNFCFLVDDSQKPIGMFTLRDIII 378

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLICN 217
           QFAPPC+DS + GGGFFESALE TGCQ++NGT++C+
Sbjct: 379 QFAPPCIDSGVHGGGFFESALEQTGCQVKNGTIVCD 412

[Close]

BLAST of CmaCh02G003890 vs. NCBI nr
Match: gi|643735130|gb|KDP41771.1| (hypothetical protein JCGZ_26789 [Jatropha curcas])

HSP 1 Score: 241.1 bits (614), Expect = 1.8e-60
Identity = 116/217 (53.46%), Postives = 156/217 (71.89%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGLEWFD I DK + +FRF +EE V+  YGDQ+I EA H+LWE ++ A+AV +RE
Sbjct: 205 LLLQSSGLEWFDGIADKALFEFRFPSEEQVILTYGDQSIAEALHILWESRIVAIAVINRE 264

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           ++ +IGC  NSD YLLLE ++L  NRK++TV EF+HME+    AD++P ++    AL  +
Sbjct: 265 TEKIIGCFSNSDVYLLLENDELLDNRKKITVAEFIHMETG--NADADPAIEQDLGALFSA 324

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
            A  L    +P MH PVT +R DTLKQ MK +AET  +F FLV+ S +  G+ T+ D+I 
Sbjct: 325 GALCLKSRFLPRMHCPVTAKRSDTLKQTMKKVAETKGNFCFLVDDSQKPIGMFTLRDIII 384

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLICNK 218
           QFAPPC+DS + GGGFFESALE TGCQ++NGT+   K
Sbjct: 385 QFAPPCIDSGVHGGGFFESALEQTGCQVKNGTISTEK 419

[Close]

BLAST of CmaCh02G003890 vs. NCBI nr
Match: gi|566187595|ref|XP_002313037.2| (hypothetical protein POPTR_0009s12130g [Populus trichocarpa])

HSP 1 Score: 240.7 bits (613), Expect = 2.3e-60
Identity = 120/216 (55.56%), Postives = 157/216 (72.69%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGLEWFDSI DK +S+FRF NEE V  VYGD+++ EA H+L E ++G VAV +RE
Sbjct: 221 LLLQSSGLEWFDSIADKALSEFRFGNEERVDLVYGDRSLAEALHILRESRIGVVAVVNRE 280

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           +K +IGC+RNSD YLLLE  ++  +RKRLT  EF+H E++KE +D   T +    AL  +
Sbjct: 281 NKKVIGCIRNSDVYLLLENNEILGDRKRLTAGEFIHTETAKENSDG--TFERDLGALFAA 340

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
            A  L    +  M +PVT ++ +TLKQ MK +AET   F FLVN + Q  G+LT+ DVI 
Sbjct: 341 GALQLRNNFLTKMDSPVTTKKSNTLKQAMKDLAETKGCFCFLVNDAQQPAGLLTLRDVII 400

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLICN 217
           QFAPPC+DS I GGGFFESALE TGCQ++NGT+IC+
Sbjct: 401 QFAPPCIDSNIHGGGFFESALEQTGCQVKNGTVICD 434

[Close]

BLAST of CmaCh02G003890 vs. NCBI nr
Match: gi|645262789|ref|XP_008236921.1| (PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like isoform X2 [Prunus mume])

HSP 1 Score: 240.4 bits (612), Expect = 3.1e-60
Identity = 121/214 (56.54%), Postives = 161/214 (75.23%), Query Frame = 1


Query: 1   MLLESSGLEWFDSIVDKVISKFRFHNEENVLHVYGDQNIMEAFHLLWEKQMGAVAVTDRE 60
           +LL+SSGL+WFDSI DK +S+FRF NEE+V+HVYGDQ++ EA H+LW+ Q GAVAVTDR+
Sbjct: 206 LLLQSSGLDWFDSIADKPLSEFRFGNEEHVVHVYGDQSMTEALHVLWKSQNGAVAVTDRK 265

Query: 61  SKSLIGCLRNSDTYLLLEKEDLFHNRKRLTVKEFMHMESSKEQADSNPTVKGGQRALTLS 120
           SK +IG +R  D YLLLE  +L  N K LTV+EF+HME+   +  S+PT++    AL  +
Sbjct: 266 SKRVIGSIRKCDIYLLLE--NLPRNIKSLTVEEFIHMENDDHKTGSDPTIERDIGALLSA 325

Query: 121 SARPLVKCKVPNMHTPVTIRRDDTLKQVMKTMAETNSSFSFLVNSSHQATGILTVGDVIT 180
               L     P M +PVT ++ +TLKQ M+ MA+T SSFSFLV+ S+QATG+LT+ D+I 
Sbjct: 326 GFLRLKNNFAPRMDSPVTNKKTETLKQAMRNMADTKSSFSFLVDESNQATGMLTLRDMII 385

Query: 181 QFAPPCMDSTIQGGGFFESALEHTGCQIRNGTLI 215
            FAPPC+DS+I G GFFESALE TGC +++GT+I
Sbjct: 386 HFAPPCIDSSIHGCGFFESALEQTGCHVKDGTII 417

The following BLAST results are available for this feature:

BLAST of CmaCh02G003890 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KING1_ARATH	9.3e-09	22.04	SNF1-related protein kinase regulatory subunit gamma-1 OS=Arabidopsis thaliana G...	[more]

BLAST of CmaCh02G003890 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067L009_JATCU	1.3e-60	53.46	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26789 PE=4 SV=1	[more]
B9HRL1_POPTR	1.6e-60	55.56	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s12130g PE=4 SV=2	[more]
B9RH65_RICCO	1.1e-59	52.78	AMP-activated protein kinase, gamma regulatory subunit, putative OS=Ricinus comm...	[more]
M5W341_PRUPE	1.1e-59	57.48	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024965mg PE=4 SV=1	[more]
M5VNP6_PRUPE	1.1e-59	57.48	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022050mg PE=4 S...	[more]

BLAST of CmaCh02G003890 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G48530.1	5.3e-10	22.04	SNF1-related protein kinase regulatory subunit gamma 1	[more]

BLAST of CmaCh02G003890 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674167\|ref\|XP_011650151.1\|	8.3e-82	77.16	PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Cucumis ...	[more]
gi\|802564157\|ref\|XP_012067247.1\|	9.5e-62	53.70	PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Jatropha...	[more]
gi\|643735130\|gb\|KDP41771.1\|	1.8e-60	53.46	hypothetical protein JCGZ_26789 [Jatropha curcas]	[more]
gi\|566187595\|ref\|XP_002313037.2\|	2.3e-60	55.56	hypothetical protein POPTR_0009s12130g [Populus trichocarpa]	[more]
gi\|645262789\|ref\|XP_008236921.1\|	3.1e-60	56.54	PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like isoform X...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000644	CBS_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G003890.1	CmaCh02G003890.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000644	CBS domain	PFAM	PF00571	CBS	coord: 133..179 score: 3.
IPR000644	CBS domain	PROFILE	PS51371	CBS	coord: 25..83 score: 6.736coord: 132..189 score: 9
None	No IPR available	GENE3D	G3DSA:3.10.580.10		coord: 28..82 score: 6.2E-12coord: 125..182 score: 6.2
None	No IPR available	PANTHER	PTHR13780	AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT	coord: 1..115 score: 3.8E-82coord: 136..215 score: 3.8
None	No IPR available	PANTHER	PTHR13780:SF22	CBS DOMAIN-CONTAINING PROTEIN	coord: 136..215 score: 3.8E-82coord: 1..115 score: 3.8
None	No IPR available	unknown	SSF54631	CBS-domain pair	coord: 29..97 score: 3.06E-15coord: 129..186 score: 3.06

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G003890	ClCG11G004270	Watermelon (Charleston Gray)	cmawcgB517
CmaCh02G003890	CmoCh02G003960	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G003890	Lsi10G003820	Bottle gourd (USVL1VR-Ls)	cmalsiB548
CmaCh02G003890	Cp4.1LG05g12580	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G003890	MELO3C023309.2	Melon (DHL92) v3.6.1	cmamedB628

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G003890	Cucumber (Gy14) v2	cgybcmaB229
CmaCh02G003890	Cucumber (Gy14) v2	cgybcmaB961
CmaCh02G003890	Melon (DHL92) v3.6.1	cmamedB643
CmaCh02G003890	Silver-seed gourd	carcmaB0239
CmaCh02G003890	Silver-seed gourd	carcmaB0442
CmaCh02G003890	Silver-seed gourd	carcmaB0655
CmaCh02G003890	Cucumber (Chinese Long) v3	cmacucB0701
CmaCh02G003890	Cucumber (Chinese Long) v3	cmacucB0724
CmaCh02G003890	Cucumber (Chinese Long) v3	cmacucB0769
CmaCh02G003890	Watermelon (97103) v2	cmawmbB613
CmaCh02G003890	Watermelon (97103) v2	cmawmbB619
CmaCh02G003890	Wax gourd	cmawgoB0739
CmaCh02G003890	Wax gourd	cmawgoB0745
CmaCh02G003890	Cucurbita maxima (Rimu)	cmacmaB060
CmaCh02G003890	Cucurbita maxima (Rimu)	cmacmaB160
CmaCh02G003890	Cucurbita maxima (Rimu)	cmacmaB469
CmaCh02G003890	Cucurbita maxima (Rimu)	cmacmaB452
CmaCh02G003890	Cucumber (Gy14) v1	cgycmaB0254
CmaCh02G003890	Cucumber (Gy14) v1	cgycmaB1040
CmaCh02G003890	Cucurbita moschata (Rifu)	cmacmoB599
CmaCh02G003890	Cucurbita moschata (Rifu)	cmacmoB606
CmaCh02G003890	Wild cucumber (PI 183967)	cmacpiB593
CmaCh02G003890	Wild cucumber (PI 183967)	cmacpiB651
CmaCh02G003890	Cucumber (Chinese Long) v2	cmacuB588
CmaCh02G003890	Cucumber (Chinese Long) v2	cmacuB644
CmaCh02G003890	Melon (DHL92) v3.5.1	cmameB549
CmaCh02G003890	Melon (DHL92) v3.5.1	cmameB563
CmaCh02G003890	Watermelon (Charleston Gray)	cmawcgB531
CmaCh02G003890	Watermelon (97103) v1	cmawmB586
CmaCh02G003890	Watermelon (97103) v1	cmawmB610
CmaCh02G003890	Cucurbita pepo (Zucchini)	cmacpeB616
CmaCh02G003890	Cucurbita pepo (Zucchini)	cmacpeB626
CmaCh02G003890	Bottle gourd (USVL1VR-Ls)	cmalsiB562
CmaCh02G003890	Bottle gourd (USVL1VR-Ls)	cmalsiB577