CmaCh02G003480 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G003480
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr02 : 1690604 .. 1692371 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGGTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAATCATCCATCATTCCAAAATCTACTCAGCCATGCAGAGGAGGAGTTTGGCTTCCATCATCCACAGGGGGGTCTAACCATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAGGTCTCTTGAAGGATGCAGAAGAAAGGACAATATGCCATTTTTGACAATTTTTTTCCAACTCGTTTACTTTTTGACACATGCTAGAGTGTTGTAGAGTGGGATACCTTCCTGCCTATAAATGAGTTGCATTGTAAAGATACATTTACCGACAGAACTAATGGAAAATAGATCAATTCAGCATCAATTTCTATATCTTATTTTCTGGTGATTTGTGATTGCTAATCTGAGGTTTTGGGGAGAGAGAAAACTTGTTACTAAATTATTATATACCAAAAAAGAAACTGAATAACACATTGATCGGCATCAAACATTCTACAAGTTCATACAGATTTCCCAGAAATCTGTTATATGTTTCAAAGGGTAATATGGGAGAGACGGAGGGAAACGGATTGTGTTTCCAATATCATACTTGAATCATCCTTCATTCCAACCACTGCTTAAACACGCTGAGGAAGAGTTTGTATTCCATCATCCTCAGGTTGTCAAACAAATCCTTGCAAAAAGATGTCTTTCTTGATTTCACTTCTAGATTGGAAGTTTCTTAAAGATGAGGGGAAAGAAAATTTACCAAGTTTTGAAAATTTTCCCTGTTTTCTTGACTCGTTTATGAACTTGGATTAAAATGTTGCAGGAAATCCAAGAACAATTCCTTCCTGAATGTTAATGAATGACACTGATTCTTGCTACTGACATCTGACAAAACAGGCAGAAATTATAGAACGGTCATGATTTAGTGTTGCATTGAAACAGTAAAATTATGACTATCAAATACTTGCCTATGGTAGGGGCCTTAAGTTTCAACTATGAAAAATATGGTTCACTTAAGGGGGATTAAGAAAAGATCAAAATTTATTCAAACCTGTTTATCCTTTTTCTGGTCGTATGAGCATTGTTAGGGAACAGCTAATACACTTTGCATTTTCATGGTCATTCATTTATTCAAGAAAAACCTTTGTGCTCAGCTGAATTCAAGTAAAGTAGCAAGAGCATGGAGATGAAAAACCCAACGAATTCAGGAGAATAAAATTCAAGAAGGGGCACAGTGTTCTTGTAAGAAAATGTGATAGTCTATTTCAATTTTGAATCTCTTTTCTGCTACTCAACATTTACATGTAGAAGCTAACTCTACATTGATGTTCTACATTTAACTATGGGAAAAAATCGAAGGGAATCTGGCAAAACTGTGTGGAGGATTGTTATTCTTCTCTTTCAGGAAGATTGCAGCTTGGATGTCAGATTGATGAAGACATCTTCTCTGCAAGGAATTGTAAGACCTCCACTTGGATGTTTAAATCCAAATTCTTCTTCAGCACAGTTGAGCAAAGCAGAAAAAGAAGGATGGTTTAAGTATGCTATTGGAACTACAAATCTCTCTCTCAATATCTCCCACATAAACTGCAATATGGCCTTTGGGAATGCCACACCGGTTTCTGGAAGAAGCGGTATGCATTTTGACAGCTTGCTTGGCATTGAGGAGAAGTGA

mRNA sequence

ATGGGTATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGGTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAATCATCCATCATTCCAAAATCTACTCAGCCATGCAGAGGAGGAGTTTGGCTTCCATCATCCACAGGGGGGTCTAACCATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAGGAAGATTGCAGCTTGGATGTCAGATTGATGAAGACATCTTCTCTGCAAGGAATTGTAAGACCTCCACTTGGATGTTTAAATCCAAATTCTTCTTCAGCACAGTTGAGCAAAGCAGAAAAAGAAGGATGGTTTAAGTATGCTATTGGAACTACAAATCTCTCTCTCAATATCTCCCACATAAACTGCAATATGGCCTTTGGGAATGCCACACCGGTTTCTGGAAGAAGCGGTATGCATTTTGACAGCTTGCTTGGCATTGAGGAGAAGTGA

Coding sequence (CDS)

ATGGGTATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGGTTTACCAAAAGTCAGCTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAATCATCCATCATTCCAAAATCTACTCAGCCATGCAGAGGAGGAGTTTGGCTTCCATCATCCACAGGGGGGTCTAACCATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAGGAAGATTGCAGCTTGGATGTCAGATTGATGAAGACATCTTCTCTGCAAGGAATTGTAAGACCTCCACTTGGATGTTTAAATCCAAATTCTTCTTCAGCACAGTTGAGCAAAGCAGAAAAAGAAGGATGGTTTAAGTATGCTATTGGAACTACAAATCTCTCTCTCAATATCTCCCACATAAACTGCAATATGGCCTTTGGGAATGCCACACCGGTTTCTGGAAGAAGCGGTATGCATTTTGACAGCTTGCTTGGCATTGAGGAGAAGTGA

Protein sequence

MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQEDCSLDVRLMKTSSLQGIVRPPLGCLNPNSSSAQLSKAEKEGWFKYAIGTTNLSLNISHINCNMAFGNATPVSGRSGMHFDSLLGIEEK

Homology

[Close]

BLAST of CmaCh02G003480 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-24
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmaCh02G003480 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.5e-23
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmaCh02G003480 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.5e-23
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmaCh02G003480 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.6e-23
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmaCh02G003480 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.6e-23
Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGF 71
          AK+IL   +    +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRL 95
           HP GGLTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh02G003480 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.6e-43
Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MG RLLSLVPHAKQILKMQSGFTK+QL+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ 
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQ
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of CmaCh02G003480 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.9e-42
Identity = 84/95 (88.42%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MGIRLLSLVPHAKQILK+QSG TK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSF+ 
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ 95

[Close]

BLAST of CmaCh02G003480 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.8e-42
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ 
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ 95

[Close]

BLAST of CmaCh02G003480 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 3.5e-40
Identity = 81/95 (85.26%), Postives = 88/95 (92.63%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MG+ LL LVPHAK+ILKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VP+SYLN PSFQ 
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LLS AEEEFGFHHP GGLTIPCKEDAF+DLTSRL+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLK 95

[Close]

BLAST of CmaCh02G003480 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MGIR LSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRF+VPISYLN  SFQ 
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LLS+AEEEFGFHHPQGGLTIPCKEDAF+DLTS+LQ
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQ 95

[Close]

BLAST of CmaCh02G003480 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 5.2e-27
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRF+VP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQNLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR 94
          SFQ+LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmaCh02G003480 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.4 bits (285), Expect = 7.5e-26
Identity = 59/105 (56.19%), Postives = 76/105 (72.38%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVGE---IQRKRFLVPIS 60
           MG+   ++    KQILK+ S   +++        VPKGHVAVYVGE   +++KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQNLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF+  LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmaCh02G003480 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-25
Identity = 55/95 (57.89%), Postives = 72/95 (75.79%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEI-QRKRFLVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE+ Q++RF+VP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 NLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRL 95
           LL  AEEEFGF HP GGLTIPC E  FIDL SRL
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRL 94

[Close]

BLAST of CmaCh02G003480 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-25
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmaCh02G003480 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 8.3e-25
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQNLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmaCh02G003480 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 184.9 bits (468), Expect = 1.3e-43
Identity = 87/95 (91.58%), Postives = 92/95 (96.84%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MGIRLLSLVPHAKQ+LKMQSGFTK+QLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQ 
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LLS+AEEEFGFHHPQGGLTIPCKED F+DLTSRLQ
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQ 95

[Close]

BLAST of CmaCh02G003480 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 3.7e-43
Identity = 87/95 (91.58%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MG RLLSLVPHAKQILKMQSGFTK+QL+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ 
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQ
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

[Close]

BLAST of CmaCh02G003480 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 4.1e-42
Identity = 84/95 (88.42%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MGIRLLSLVPHAKQILK+QSG TK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSF+ 
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ 95

[Close]

BLAST of CmaCh02G003480 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 5.4e-42
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ 
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQ 95

[Close]

BLAST of CmaCh02G003480 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 7.0e-42
Identity = 85/95 (89.47%), Postives = 91/95 (95.79%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQN 60
          MGIRLLSLVPHAKQILKMQSGFTK++L+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ 
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQ 96
          LL+ AEEEFGFHHP GGLTIPCKEDAF+DLTSRLQ
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQ 95

The following BLAST results are available for this feature:

BLAST of CmaCh02G003480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	3.0e-24	65.48	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	1.5e-23	67.09	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	2.5e-23	65.82	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	5.6e-23	65.82	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU23_ARATH	5.6e-23	63.86	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of CmaCh02G003480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	2.6e-43	91.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	2.9e-42	88.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	3.8e-42	88.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	3.5e-40	85.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.7e-39	86.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]

BLAST of CmaCh02G003480 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	5.2e-27	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	7.5e-26	56.19	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.3e-25	57.89	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.7e-25	65.48	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	8.3e-25	67.09	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh02G003480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115596\|ref\|XP_008457635.1\|	1.3e-43	91.58	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	3.7e-43	91.58	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	4.1e-42	88.42	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	5.4e-42	88.42	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	7.0e-42	89.47	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G003480.1	CmaCh02G003480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 5.2
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..98 score: 1.0
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..98 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G003480	Cucurbita pepo (Zucchini)	cmacpeB616
CmaCh02G003480	Cucurbita pepo (Zucchini)	cmacpeB626
CmaCh02G003480	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G003480	Bottle gourd (USVL1VR-Ls)	cmalsiB548
CmaCh02G003480	Bottle gourd (USVL1VR-Ls)	cmalsiB565
CmaCh02G003480	Bottle gourd (USVL1VR-Ls)	cmalsiB577
CmaCh02G003480	Cucumber (Gy14) v2	cgybcmaB229
CmaCh02G003480	Cucumber (Gy14) v2	cgybcmaB961
CmaCh02G003480	Melon (DHL92) v3.6.1	cmamedB617
CmaCh02G003480	Melon (DHL92) v3.6.1	cmamedB643
CmaCh02G003480	Melon (DHL92) v3.6.1	cmamedB670
CmaCh02G003480	Silver-seed gourd	carcmaB0442
CmaCh02G003480	Cucumber (Chinese Long) v3	cmacucB0701
CmaCh02G003480	Cucumber (Chinese Long) v3	cmacucB0724
CmaCh02G003480	Cucumber (Chinese Long) v3	cmacucB0769
CmaCh02G003480	Watermelon (97103) v2	cmawmbB608
CmaCh02G003480	Watermelon (97103) v2	cmawmbB613
CmaCh02G003480	Wax gourd	cmawgoB0734
CmaCh02G003480	Wax gourd	cmawgoB0745
CmaCh02G003480	Wax gourd	cmawgoB0767
CmaCh02G003480	Cucurbita maxima (Rimu)	cmacmaB469
CmaCh02G003480	Cucurbita maxima (Rimu)	cmacmaB452
CmaCh02G003480	Cucumber (Gy14) v1	cgycmaB0480
CmaCh02G003480	Cucumber (Gy14) v1	cgycmaB1053
CmaCh02G003480	Cucurbita moschata (Rifu)	cmacmoB599
CmaCh02G003480	Cucurbita moschata (Rifu)	cmacmoB606
CmaCh02G003480	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G003480	Wild cucumber (PI 183967)	cmacpiB593
CmaCh02G003480	Wild cucumber (PI 183967)	cmacpiB651
CmaCh02G003480	Cucumber (Chinese Long) v2	cmacuB588
CmaCh02G003480	Cucumber (Chinese Long) v2	cmacuB644
CmaCh02G003480	Melon (DHL92) v3.5.1	cmameB537
CmaCh02G003480	Melon (DHL92) v3.5.1	cmameB563
CmaCh02G003480	Watermelon (Charleston Gray)	cmawcgB517
CmaCh02G003480	Watermelon (Charleston Gray)	cmawcgB531
CmaCh02G003480	Watermelon (97103) v1	cmawmB586
CmaCh02G003480	Watermelon (97103) v1	cmawmB610