CmaCh02G003460 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G003460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr02 : 1687648 .. 1690068 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCAGACTACCTTCACTTCTCCTCAATGTCAAGCAAGCTATCAAAATGCATACCACTTCTTCTAGAAACCAGTGTGGCGTCCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAAAGAAAAAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGTCTTACAATTCCTTGTAGAGAAGACATCTTCATCAATCTCACATCCAAGCTGCAAACTTCCTGAAAAAGAGAAGAAAAAAAAATCCTCCACACAGTTTTGTTAGATTCCCTCCGATTTTTTCCCATAGTTTAGTGTAGAACATCAATGTAGAGTTAGCTTCTACATGTAAATGATGAGTAGCAGAGAAGGGATACATAGGTTTGTAAGCATAAAAATTGAGATACAGTCACATTTTCTTTCAAGAACTCTTTCCCCCTTCATGAATTTTATTCACCTGAATTTGTTGGGTTTTTCATCTCCATTTTCTTGAATAAATGAATACCATGAAATGCAAAGTGTTACTCTAACGATGCTCATAAGAGAATAAAAAGATGAGTAGAGAACACCAAAAAGAAGCCTTGAAATGAGCTAATTCAAAATGGTTGATCCAAGAAAAGCTCTCATCTTCAAACATCCTCTTATTTCGTTTTACATTTTCTAGATTGGCTAATCAGAATTTTTGCCTTTCTTGAGAACCGGATGGAAATAGAAATCTTCCTTCATTTTTATGATAAATTCTCTGTGCTTGAGTTTTGTCAAATGTCTTGTTGCGTGATAAAATGAGAAAATACAAAGACCTTATATCTCATAATTCATGAATTAAAGGGATAAAGTTTATCAGTGAAAGAAATATAATTTTATAGCTGTGCCAACACAATTTTATACGGGTTATAATGTTCTGGACATATTGAGGCTTTCTGATCCATGCTTGATCTTACAATCACTGACTCGAAATGGGCTACTAAAGAGCAACTGTCGGCATATCTTCATCATCTGGCTGGGCACTGGGATGTGAAACTTTAAACAGAGACTCTTCCTTGTTAGACCACTTTGGTTCGATATTGTGTCGATTGGAGGGTAATTAAACTCCTTTTCTATCCCTTGAGTTTCAAGAAAGTTTTTCTAACTAAAAATGAACAAAAGAATGTTAGGGATTTCTATTTGTACATAATCTTTCAAAACCTATGTAGCGTAGAAGTGAGATCAATGAAGGTATCTTCTCTGCAGGGATTGTGAAACCCCCCATAGGATGATTGTATCTAAACTCTTCCTCAGTCCTCTTAAGTAAAGCCAAGAATGTAGAATGGTTTAAGTATGATATCGAAACTAAAAACCTGTTCCTTTGGATTTAGACTGCAACGTGACCCTTTGGAACATCAGATTGGTTTGTTGTAGAAATAGTTTGCTTTATGAGAACCTGCTTGGCATTGAGAAGTATGAAAGGCAACTGGATTCCCATGTCTAATCTTAGTAACAGGAGGTGGAACATAGGATGCATAGGGACTTTTGTTCAGTAGATCTAACATAGATTAATATTTACAGTAGAAAATTTAAATTGGCACATAAGGATTCAGTTTGCTTTGGATCTGTTTGAACTTAGAAGTTTGAATCTTCAAGATTCTGCTTAGTTTCTTGATGTGCTATGCTCTAGCAACAATTTTTCATTGTTCCATGAATTGCAGGTTACTTTCACAAATAAAGCAACAAAGAAAAGGCTATATAGAAATTGATGTTAAATTTGTGTATTTTTTCATTTGCAGGCAAGAAGGCCATGTCATTCTTCAACATTCTAGTATGAATCAAAAAAACAAGTGTCAGAAACAAACAGAAATGTTTGTCAAAAAATTGAAGCTTGTGCTTTGCTGTCGATCCTTCAAGAAACTTGCAATCTAGAAGTGAGATCAATAAAGGCATCTTCTTTGCAAGGAATTGTTAGGCCCCCTTGTGGATGATGGAAGCCAAACTCCTCCTCGGCATGACCGAGCAGTTTCTGGAACGATGGATGGTTTAGATAAGATATCGGAACCACGAACCGTTTCCTTTGGATCTCTCCCACATAAACAGCCACATGGCCTTTTGGAACGTCCAACTGGTTTTTGGTGAAACTTGACTGCATCTTTAGAATTTGCTTGGCATTAGGAACCAAAGATAGCAACCGAATCCCCATTTTCTCGAACGAAAGGCAGTCTGTCTAATGTTCTAATCTGATTGGTTTAGAGCTAACTAGAAGAGGAAGTAGAAGTTGAAATGAGTTGAGGGTGGTGTTTGAAGGCTCATTTTGATGTTTATATTTATAATATTTCAGAAGGAAATACTATGCTGATGACTCCGACCATTCCAGTGGCAAAGTGGGGTATTGATGTCTGGTAG

mRNA sequence

ATGGGAATCAGACTACCTTCACTTCTCCTCAATGTCAAGCAAGCTATCAAAATGCATACCACTTCTTCTAGAAACCAGTGTGGCGTCCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAAAGAAAAAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGCAAGAAGGCCATGTCATTCTTCAACATTCTAGAATTGTTAGGCCCCCTTGTGGATGATGGAAGCCAAACTCCTCCTCGGCATGACCGAGCAGTTTCTGGAACGATGGATGGTTTAGATAAGATATCGGAACCACGAACCGTTTCCTTTGGATCTCTCCCACATAAACAGCCACATGGCCTTTTGGAACGTCCAACTGAAGGAAATACTATGCTGATGACTCCGACCATTCCAGTGGCAAAGTGGGGTATTGATGTCTGGTAG

Coding sequence (CDS)

ATGGGAATCAGACTACCTTCACTTCTCCTCAATGTCAAGCAAGCTATCAAAATGCATACCACTTCTTCTAGAAACCAGTGTGGCGTCCCCAAAGGCCATATTGCAGTTTATGTGGGAGATATTGAAAGAAAAAGATTTGTAGTTCCAATAGCATACTTAAACCATCCTTCTTTTTCTGCTTTGCTCAACAGTGCAGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGCAAGAAGGCCATGTCATTCTTCAACATTCTAGAATTGTTAGGCCCCCTTGTGGATGATGGAAGCCAAACTCCTCCTCGGCATGACCGAGCAGTTTCTGGAACGATGGATGGTTTAGATAAGATATCGGAACCACGAACCGTTTCCTTTGGATCTCTCCCACATAAACAGCCACATGGCCTTTTGGAACGTCCAACTGAAGGAAATACTATGCTGATGACTCCGACCATTCCAGTGGCAAAGTGGGGTATTGATGTCTGGTAG

Protein sequence

MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNSAEEEFGFKHPTGGKKAMSFFNILELLGPLVDDGSQTPPRHDRAVSGTMDGLDKISEPRTVSFGSLPHKQPHGLLERPTEGNTMLMTPTIPVAKWGIDVW

Homology

[Close]

BLAST of CmaCh02G003460 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 37/69 (53.62%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 9  LLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNSAEEE 68
          LL  K+ +   TT++      PKG +AVYVG+ ++KR++VPI+YLN PSF ALL+ +EEE
Sbjct: 7  LLGAKKILSRSTTAAS---AAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGG 78
          FGF HP GG
Sbjct: 67 FGFDHPMGG 72

[Close]

BLAST of CmaCh02G003460 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.2e-14
Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MG RLP +    K +I  +  SS++   VPKG++ VYVGD + +RF++P++YLN PSF  
Sbjct: 1  MGFRLPGIR---KTSIAANQASSKS-VEVPKGYLVVYVGD-KMRRFLIPVSYLNQPSFQD 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LLN AEEEFG+ HP GG
Sbjct: 61 LLNQAEEEFGYDHPMGG 72

[Close]

BLAST of CmaCh02G003460 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1


Query: 15 AIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNSAEEEFGFKHP 74
          A K+ + S+      PKG +AVYVG+ ++KR++VP++YLN PSF ALL+ +EEEFGF HP
Sbjct: 10 AKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHP 69

Query: 75 TGG 78
           GG
Sbjct: 70 MGG 72

[Close]

BLAST of CmaCh02G003460 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 1


Query: 7  SLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNSAE 66
          +L+ ++  A K+ + S+      PKG +AVYVG+ ++KR++VP++YLN PSF ALL+ +E
Sbjct: 2  ALVRSLLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSE 61

Query: 67 EEFGFKHPTGG 78
          EEFGF HP GG
Sbjct: 62 EEFGFDHPMGG 72

[Close]

BLAST of CmaCh02G003460 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 34/71 (47.89%), Postives = 52/71 (73.24%), Query Frame = 1


Query: 7  SLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSALLNSAE 66
          +L+ ++  A K+ + S+      PKG +AVYVG+ ++KR++VP++YLN PSF ALL+ +E
Sbjct: 2  ALVRSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSE 61

Query: 67 EEFGFKHPTGG 78
          +EFGF HP GG
Sbjct: 62 DEFGFDHPMGG 72

[Close]

BLAST of CmaCh02G003460 vs. TrEMBL
Match: A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-33
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLN KQ  KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LL SAEEEFGFKHPTGG
Sbjct: 61 LLKSAEEEFGFKHPTGG 77

[Close]

BLAST of CmaCh02G003460 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIR+PSLLLN KQ  +M + S+R    +PKGHIAVYVG+IERKRFVVP++YLNHP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LLN AEEEFGF HP+GG
Sbjct: 61 LLNRAEEEFGFNHPSGG 77

[Close]

BLAST of CmaCh02G003460 vs. TrEMBL
Match: A0A061DZI1_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.0e-24
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 1   MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
           MG RLPSL+L+ +Q +K H+  SR Q  VPKGH+AVYVG+ +RKRFVVPI+YLNHPSF+ 
Sbjct: 80  MGFRLPSLILSSRQILKHHSGFSRKQPDVPKGHVAVYVGEAQRKRFVVPISYLNHPSFAE 139

Query: 61  LLNSAEEEFGFKHPTGG 78
           LLN AEEEFGF HPTGG
Sbjct: 140 LLNRAEEEFGFNHPTGG 156

[Close]

BLAST of CmaCh02G003460 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 7.0e-24
Identity = 56/77 (72.73%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPS+LLN KQ +KM   S+RNQ  VPKGHIAVYVG+I+RKRFVVPI+YL +PSF  
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LLN +EEEFGF HP GG
Sbjct: 61 LLNRSEEEFGFCHPMGG 77

[Close]

BLAST of CmaCh02G003460 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-23
Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPS+LL+ KQ +KM T S+R Q  VPKGHI VYVG+ +RKRF+VPI+YLNHPSF  
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LL+ AEEEFGF HPTGG
Sbjct: 61 LLSRAEEEFGFSHPTGG 77

[Close]

BLAST of CmaCh02G003460 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 87.8 bits (216), Expect = 6.7e-18
Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIK----MHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHP 60
          M IR+P +L + KQ ++    + ++SS +   VPKG++AVYVG+   KRFVVP++YL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFSALLNSAEEEFGFKHPTGG 78
          SF  LL  AEEEFGF HP GG
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGG 81

[Close]

BLAST of CmaCh02G003460 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 87.4 bits (215), Expect = 8.7e-18
Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDI-ERKRFVVPIAYLNHPSFS 60
          M IR+  +L + KQ +K  + SS N   +PKGH+AVYVG++ +++RFVVP+ YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNN-VAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLNSAEEEFGFKHPTGG 78
           LL  AEEEFGF HP GG
Sbjct: 61 KLLRKAEEEFGFDHPMGG 77

[Close]

BLAST of CmaCh02G003460 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 87.4 bits (215), Expect = 8.7e-18
Identity = 43/86 (50.00%), Postives = 60/86 (69.77%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCG------VPKGHIAVYVGD---IERKRFVVPIA 60
          MG+   ++    KQ +K+++ ++RN+        VPKGH+AVYVG+   +E+KRFVVPI+
Sbjct: 1  MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61 YLNHPSFSALLNSAEEEFGFKHPTGG 78
          +LNHPSF   L+ AEEEFGF HP GG
Sbjct: 61 FLNHPSFKEFLSRAEEEFGFNHPMGG 86

[Close]

BLAST of CmaCh02G003460 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 86.7 bits (213), Expect = 1.5e-17
Identity = 47/79 (59.49%), Postives = 55/79 (69.62%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDI--ERKRFVVPIAYLNHPSF 60
          M IRL S ++N KQ       S + Q  VPKGH+AVYVG+    +KRFVVPI+YLNHPSF
Sbjct: 1  MAIRL-SRVINSKQ-------SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 SALLNSAEEEFGFKHPTGG 78
            LL+ AEEEFGF HP GG
Sbjct: 61 QGLLSRAEEEFGFNHPIGG 71

[Close]

BLAST of CmaCh02G003460 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-16
Identity = 41/69 (59.42%), Postives = 50/69 (72.46%), Query Frame = 1


Query: 10 LNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDI-ERKRFVVPIAYLNHPSFSALLNSAEEE 69
          L+ + A  + T+ + N   VPKGH+AVYVG+   RKRFV+PI+YLNHP F  LLN AEEE
Sbjct: 19 LSARIASLLATSGTNN---VPKGHVAVYVGETYHRKRFVIPISYLNHPLFQGLLNLAEEE 78

Query: 70 FGFKHPTGG 78
          FGF HP GG
Sbjct: 79 FGFDHPMGG 84

[Close]

BLAST of CmaCh02G003460 vs. NCBI nr
Match: gi|449458562|ref|XP_004147016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 150.2 bits (378), Expect = 3.1e-33
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLLLN KQ  KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LL SAEEEFGFKHPTGG
Sbjct: 61 LLKSAEEEFGFKHPTGG 77

[Close]

BLAST of CmaCh02G003460 vs. NCBI nr
Match: gi|659115600|ref|XP_008457637.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 148.7 bits (374), Expect = 9.0e-33
Identity = 69/77 (89.61%), Postives = 71/77 (92.21%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPSLL N KQ  KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP++YLNHPSFSA
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LL SAEEEFGFKHPTGG
Sbjct: 61 LLKSAEEEFGFKHPTGG 77

[Close]

BLAST of CmaCh02G003460 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 9.0e-25
Identity = 57/77 (74.03%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIRLPS+LLN KQ +KM   S+RNQ  VPKGHIAVYVG+I+RKRFVVPI+YL HPSF  
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LLN +EEEFGF HP GG
Sbjct: 61 LLNRSEEEFGFCHPMGG 77

[Close]

BLAST of CmaCh02G003460 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 54/77 (70.13%), Postives = 65/77 (84.42%), Query Frame = 1


Query: 1  MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
          MGIR+PSLLLN KQ  +M + S+R    +PKGHIAVYVG+IERKRFVVP++YLNHP+F +
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLNSAEEEFGFKHPTGG 78
          LLN AEEEFGF HP+GG
Sbjct: 61 LLNRAEEEFGFNHPSGG 77

[Close]

BLAST of CmaCh02G003460 vs. NCBI nr
Match: gi|590684897|ref|XP_007041961.1| (SAUR-like auxin-responsive protein family [Theobroma cacao])

HSP 1 Score: 118.6 bits (296), Expect = 1.0e-23
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 1   MGIRLPSLLLNVKQAIKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPIAYLNHPSFSA 60
           MG RLPSL+L+ +Q +K H+  SR Q  VPKGH+AVYVG+ +RKRFVVPI+YLNHPSF+ 
Sbjct: 80  MGFRLPSLILSSRQILKHHSGFSRKQPDVPKGHVAVYVGEAQRKRFVVPISYLNHPSFAE 139

Query: 61  LLNSAEEEFGFKHPTGG 78
           LLN AEEEFGF HPTGG
Sbjct: 140 LLNRAEEEFGFNHPTGG 156

The following BLAST results are available for this feature:

BLAST of CmaCh02G003460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU20_ARATH	1.1e-14	53.62	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
AX10A_SOYBN	4.2e-14	51.95	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	[more]
SAU24_ARATH	1.2e-13	53.97	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU23_ARATH	1.2e-13	49.30	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU22_ARATH	1.6e-13	47.89	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]

BLAST of CmaCh02G003460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM71_CUCSA	2.2e-33	90.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	1.1e-24	70.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A061DZI1_THECC	7.0e-24	70.13	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006725 PE=4 ...	[more]
A0A0A0LM74_CUCSA	7.0e-24	72.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	2.0e-23	71.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]

BLAST of CmaCh02G003460 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	6.7e-18	51.85	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	8.7e-18	53.85	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	8.7e-18	50.00	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	1.5e-17	59.49	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	1.3e-16	59.42	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh02G003460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458562\|ref\|XP_004147016.1\|	3.1e-33	90.91	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115600\|ref\|XP_008457637.1\|	9.0e-33	89.61	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669614\|ref\|XP_011649278.1\|	9.0e-25	74.03	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	1.5e-24	70.13	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|590684897\|ref\|XP_007041961.1\|	1.0e-23	70.13	SAUR-like auxin-responsive protein family [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G003460.1	CmaCh02G003460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 16..74 score: 2.3
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..77 score: 1.7
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..77 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G003460	CsaV3_2G015520	Cucumber (Chinese Long) v3	cmacucB0701

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G003460	Cucurbita maxima (Rimu)	cmacmaB469
CmaCh02G003460	Cucurbita maxima (Rimu)	cmacmaB452
CmaCh02G003460	Cucumber (Gy14) v1	cgycmaB0480
CmaCh02G003460	Cucumber (Gy14) v1	cgycmaB1053
CmaCh02G003460	Cucurbita moschata (Rifu)	cmacmoB599
CmaCh02G003460	Cucurbita moschata (Rifu)	cmacmoB606
CmaCh02G003460	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G003460	Wild cucumber (PI 183967)	cmacpiB593
CmaCh02G003460	Wild cucumber (PI 183967)	cmacpiB651
CmaCh02G003460	Cucumber (Chinese Long) v2	cmacuB588
CmaCh02G003460	Cucumber (Chinese Long) v2	cmacuB644
CmaCh02G003460	Melon (DHL92) v3.5.1	cmameB537
CmaCh02G003460	Melon (DHL92) v3.5.1	cmameB563
CmaCh02G003460	Watermelon (Charleston Gray)	cmawcgB517
CmaCh02G003460	Watermelon (Charleston Gray)	cmawcgB531
CmaCh02G003460	Watermelon (97103) v1	cmawmB586
CmaCh02G003460	Watermelon (97103) v1	cmawmB610
CmaCh02G003460	Cucurbita pepo (Zucchini)	cmacpeB616
CmaCh02G003460	Cucurbita pepo (Zucchini)	cmacpeB626
CmaCh02G003460	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G003460	Bottle gourd (USVL1VR-Ls)	cmalsiB548
CmaCh02G003460	Bottle gourd (USVL1VR-Ls)	cmalsiB565
CmaCh02G003460	Bottle gourd (USVL1VR-Ls)	cmalsiB577
CmaCh02G003460	Cucumber (Gy14) v2	cgybcmaB229
CmaCh02G003460	Cucumber (Gy14) v2	cgybcmaB961
CmaCh02G003460	Melon (DHL92) v3.6.1	cmamedB617
CmaCh02G003460	Melon (DHL92) v3.6.1	cmamedB643
CmaCh02G003460	Melon (DHL92) v3.6.1	cmamedB670
CmaCh02G003460	Silver-seed gourd	carcmaB0442
CmaCh02G003460	Cucumber (Chinese Long) v3	cmacucB0724
CmaCh02G003460	Cucumber (Chinese Long) v3	cmacucB0769
CmaCh02G003460	Watermelon (97103) v2	cmawmbB608
CmaCh02G003460	Watermelon (97103) v2	cmawmbB613
CmaCh02G003460	Wax gourd	cmawgoB0734
CmaCh02G003460	Wax gourd	cmawgoB0745
CmaCh02G003460	Wax gourd	cmawgoB0767