CmaCh02G003240 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAATCCCCGGCTAGTTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGGGTTCATCTAAAACCGAAGGAAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACTGCTGTCGAAGTTGCGCATTCGAACGTCACCTTCGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCGAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCAGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAATCCGGTGACAGAGTCGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGGTTTGCTAAGCTAAAGACACATTATTTGAATGTCAACAATGGTGATGCCATTATTGAATATGATGTTACTGTGTTTCATTATTGAGAGATTTGGAGAAGATGATAGCCGTTGGATTTGAATTCTGACATCTAATCATTTGGTCTTAAGGATTGATTAATTACCTAATTATCCTTTTGCTAAATTAATAAAAATCTCTCTTTTATTACTCCTATAAATATATTTTTAAGTTTTTTAAAGAAAATTTACGGTATTAATTTTTTTTTTATTTTTAAAATAAAGTATTAATGGTTTACCTCTAAAATTAATTATCAAGGATATTTTTTAATATTTTTTTAAAAATATAAAGGTGTTTTTTGAAACATGTAAATGTAAAAAGTATTCATTAATTTTTTTTCATTTTCTTCTTATTATTATAAACCAATATTAAATAATTATTGATATAAAAAATGTTATTATAGGGTCGAATAAGAAAAGAAATTATAAGAATCTAATTGAGAACGAGTATCTTCATTTGTATGAGATCTTTTAAGGAAAATTAGAAACAAAATGGAGAGAACTTTTAAAACGTTATCTTTACTTGTATGTGCTATCTGTCATAGTCATGTTTGTCCAAAGCGTGTTGCCAAGAGCTATTGAAGAGGTATTATTTGGGATGTACGGTAGGGAGATGCGACTAGTTTGAAGTTTAGGGAATGGCTACTGAAGGGCTATAAGGGATGTCCAAGACGTGTCTCAGAATGTACTATAAGAAAATGTGACTAGTGTTTTTTTTTTAACTTACAATTATATAACGTTGTTTTTAATTCTTTCAAACTCTCTTTCTAAAATCTCTCTGCCCCGTTTTATAGACTTATTCTAAAATCAGAGCTAGAGATTTGGGTATAAGTTTTCAAATCGAAGGCGACACAATTTCAAGTTGGTTGACTCAATCGGTGGTTAGGATGAGTGTCACACTTAGAAACGATTACATGAGTTTGAAACATGCATGCTTTTGTTCTTCTACTTTAAAACGATATCATCATTCATATGATAACGAGCACGTATCAATCTATAATTTTAAAAAGTCGATCGAGTTTATAAAGAAACTAAATAAATACTCCTAATGCCACCTAAACATCCCTTATTTGGCTAACAAGAGACTATAGCATTAAAGTGAAAATTTTGTTTAAAAAAATAAAAAAATAAAAAAATAAAAATTACCCCTAATGTGTACTAAACATCCCTAAATAGGTTTATTTTAAAATAAAATTCCTTAAAAAGGTTATATCATTAAATTCATTGATTTTTTCTTTTATAAATTAACTTTTTTAAAATTTTACAATGAGAATAAAAAAAAATAAAGAATTTGTTTGTTTGGTCTATAAATATTTTATATAATTCCTAAAATTTTAATATTATTAATTTAGTTCATAAAATTTAAAAAATATTTTTTTTCATTCTTTGTAAAATTTAAAAATATCATAAAAATAAGATATAAATGAAATTCAAATTATTATAATAATATATAATATATAAATATAAATTTTCATCCCTATTAATTTTTTTCCGAATCATATATATATTAAAAAATATTTCTTAAAAAAATTAATTAATAATTTATCATTTTTCTAATAAATTTTCTATAAAAGGAATCCTAATAAATTCGATATTACAGATCATATTTTTCAAACTAAAATGGGTCCCACATACACGTGGTGTATTCTTATTTTTCCACGTCAGTCATATTTATAAATTAAATTTAAAAAATAAAAGAAAAACCGTCTCCTTTCCATTATAAAACCACCTCGTCATCGTCTTCATCGCCACGACAAGCTCTGTTTTTACAGAGAAAAACAGAGAAAAACAGAGGAAAAGAAAATGGTGAATCTTTCTATTTCATTTTTCTTCGTTTTTCTCCTCACAGCTCTCCCATGGACTCGAACCCTCGACGCGAAGAAAACCGTAATTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTGGCAGAGGCCCCTTCCTCCGCCAACTCACCGACGCTCTTCGGCACCGTGTCTATCGCCGATGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGTTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGGGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTATTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAG ATGGCAAATCCCCGGCTAGTTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGGGTTCATCTAAAACCGAAGGAAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACTGCTGTCGAAGTTGCGCATTCGAACGTCACCTTCGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCGAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCAGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAATCCGGTGACAGAGTCGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGAGAAAAACAGAGAAAAACAGAGGAAAAGAAAATGGTGAATCTTTCTATTTCATTTTTCTTCGTTTTTCTCCTCACAGCTCTCCCATGGACTCGAACCCTCGACGCGAAGAAAACCGTAATTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTGGCAGAGGCCCCTTCCTCCGCCAACTCACCGACGCTCTTCGGCACCGTGTCTATCGCCGATGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGTTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGGGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTATTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAG ATGGCAAATCCCCGGCTAGTTATCGTTCTCTCCGTCCTCTTCCTCGTCTCCATATCGGCCCGTTCCGAGTACTACTCCAGAACTTCCCGGCGGGTTCATCTAAAACCGAAGGAAACCCATCTCCGTTTCTTCCTTTTCGACATCCTAAGCGGCGATAAACCCACTGCTGTCGAAGTTGCGCATTCGAACGTCACCTTCGGCACGTCTGTGATCCCATTCGGCACCGTCTACGCCATCGACGACCCGCTTCGAGAGGGACCCGAATATAATTCGACATTGATCGGCAATGCGAGGGGGATGTATATGTCAGCAAGTAGAGGCTCAGATTTTTGCTTGGTGATGTACATTGACTACGCTTTCACTGCAGGCAAGTTCAAGGGCAGCTCCATCAGTGTGTTTTCGAGGAATCCGGTGACAGAGTCGAAACGGGAGGTGGCGGTTGTCGGCGGGCGAGGGAAGTTTAGGATGGCTCGAGGAGAAAAACAGAGAAAAACAGAGGAAAAGAAAATGGTGAATCTTTCTATTTCATTTTTCTTCGTTTTTCTCCTCACAGCTCTCCCATGGACTCGAACCCTCGACGCGAAGAAAACCGTAATTTGCAGACGCCATTGCCGGAAGCAGACCGTCACCAAGATCCAATTCTACTTCCACGACACCATCACCGGGAAGAATCCCTCCGCCATTAAGGTGGCAGAGGCCCCTTCCTCCGCCAACTCACCGACGCTCTTCGGCACCGTGTCTATCGCCGATGACCCATTGACGGAAACGCCGGACCCGAAATCGAAGGAGGTGGGCAGGGCACAGGGGCTGTATTCGTCGGCCGCGCAGCAGGAGGTGGGTCTGCTCATGACACTGACCTATGTATTCACCGCCGGTAAGTTCAACGGCAGTTCCGTTGTTATTGTTGGGAAGAATTCGATTATGAATAAAGTCCGGGAATTGCCGGTGGTCGGAGGGACGGGGGCTTTCCGGTTCGCTCGTGGGTATGCTCTGGCGAGTACTTATTGGGCCAACAACGTTGGAGATGCAATTGTGGGTTATAATTTAACGGTTATACACTAG MANPRLVIVLSVLFLVSISARSEYYSRTSRRVHLKPKETHLRFFLFDILSGDKPTAVEVAHSNVTFGTSVIPFGTVYAIDDPLREGPEYNSTLIGNARGMYMSASRGSDFCLVMYIDYAFTAGKFKGSSISVFSRNPVTESKREVAVVGGRGKFRMARGEKQRKTEEKKMVNLSISFFFVFLLTALPWTRTLDAKKTVICRRHCRKQTVTKIQFYFHDTITGKNPSAIKVAEAPSSANSPTLFGTVSIADDPLTETPDPKSKEVGRAQGLYSSAAQQEVGLLMTLTYVFTAGKFNGSSVVIVGKNSIMNKVRELPVVGGTGAFRFARGYALASTYWANNVGDAIVGYNLTVIH
BLAST of CmaCh02G003240 vs. Swiss-Prot
Match: DIR23_ARATH (Dirigent protein 23 OS=Arabidopsis thaliana GN=DIR23 PE=2 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 5.3e-46 Identity = 87/149 (58.39%), Postives = 115/149 (77.18%), Query Frame = 1
BLAST of CmaCh02G003240 vs. Swiss-Prot
Match: DIR1_ARATH (Dirigent protein 1 OS=Arabidopsis thaliana GN=DIR1 PE=2 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 3.0e-41 Identity = 84/150 (56.00%), Postives = 108/150 (72.00%), Query Frame = 1
BLAST of CmaCh02G003240 vs. Swiss-Prot
Match: DIR2_ARATH (Dirigent protein 2 OS=Arabidopsis thaliana GN=DIR2 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.7e-39 Identity = 86/181 (47.51%), Postives = 116/181 (64.09%), Query Frame = 1
BLAST of CmaCh02G003240 vs. Swiss-Prot
Match: DIR15_ARATH (Dirigent protein 15 OS=Arabidopsis thaliana GN=DIR15 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.5e-37 Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = 1
BLAST of CmaCh02G003240 vs. Swiss-Prot
Match: DIR11_ARATH (Dirigent protein 11 OS=Arabidopsis thaliana GN=DIR11 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 4.5e-37 Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TrEMBL
Match: A0A087G244_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AAs47289U000600 PE=4 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 4.6e-81 Identity = 172/355 (48.45%), Postives = 232/355 (65.35%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TrEMBL
Match: E5GC06_CUCME (Disease resistance response protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 5.1e-72 Identity = 135/184 (73.37%), Postives = 158/184 (85.87%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TrEMBL
Match: A0A0A0LPM2_CUCSA (Disease resistance response protein OS=Cucumis sativus GN=Csa_2G264060 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 6.7e-72 Identity = 136/184 (73.91%), Postives = 157/184 (85.33%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TrEMBL
Match: A0A118JU72_CYNCS (Plant disease resistance response protein OS=Cynara cardunculus var. scolymus GN=Ccrd_007373 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.3e-62 Identity = 149/383 (38.90%), Postives = 226/383 (59.01%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TrEMBL
Match: A0A0D3HIW3_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 2.3e-56 Identity = 141/362 (38.95%), Postives = 200/362 (55.25%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TAIR10
Match: AT2G21100.1 (AT2G21100.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 186.4 bits (472), Expect = 3.0e-47 Identity = 87/149 (58.39%), Postives = 115/149 (77.18%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TAIR10
Match: AT5G42510.1 (AT5G42510.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 170.6 bits (431), Expect = 1.7e-42 Identity = 84/150 (56.00%), Postives = 108/150 (72.00%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TAIR10
Match: AT5G42500.1 (AT5G42500.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 163.7 bits (413), Expect = 2.1e-40 Identity = 86/181 (47.51%), Postives = 116/181 (64.09%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TAIR10
Match: AT4G38700.1 (AT4G38700.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 156.8 bits (395), Expect = 2.5e-38 Identity = 88/170 (51.76%), Postives = 116/170 (68.24%), Query Frame = 1
BLAST of CmaCh02G003240 vs. TAIR10
Match: AT1G22900.1 (AT1G22900.1 Disease resistance-responsive (dirigent-like protein) family protein) HSP 1 Score: 156.8 bits (395), Expect = 2.5e-38 Identity = 83/176 (47.16%), Postives = 114/176 (64.77%), Query Frame = 1
BLAST of CmaCh02G003240 vs. NCBI nr
Match: gi|674230161|gb|KFK23946.1| (hypothetical protein AALP_AAs47289U000600 [Arabis alpina]) HSP 1 Score: 309.7 bits (792), Expect = 6.6e-81 Identity = 172/355 (48.45%), Postives = 232/355 (65.35%), Query Frame = 1
BLAST of CmaCh02G003240 vs. NCBI nr
Match: gi|659115651|ref|XP_008457663.1| (PREDICTED: dirigent protein 23-like [Cucumis melo]) HSP 1 Score: 279.6 bits (714), Expect = 7.3e-72 Identity = 135/184 (73.37%), Postives = 158/184 (85.87%), Query Frame = 1
BLAST of CmaCh02G003240 vs. NCBI nr
Match: gi|449458582|ref|XP_004147026.1| (PREDICTED: dirigent protein 23 [Cucumis sativus]) HSP 1 Score: 279.3 bits (713), Expect = 9.6e-72 Identity = 136/184 (73.91%), Postives = 157/184 (85.33%), Query Frame = 1
BLAST of CmaCh02G003240 vs. NCBI nr
Match: gi|976902657|gb|KVH90595.1| (Plant disease resistance response protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62 Identity = 149/383 (38.90%), Postives = 226/383 (59.01%), Query Frame = 1
BLAST of CmaCh02G003240 vs. NCBI nr
Match: gi|604333577|gb|EYU37928.1| (hypothetical protein MIMGU_mgv1a022110mg, partial [Erythranthe guttata]) HSP 1 Score: 225.7 bits (574), Expect = 1.3e-55 Identity = 141/346 (40.75%), Postives = 193/346 (55.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |