CmaCh01G014990 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh01G014990
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr01 : 10529118 .. 10533383 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCATGGTAAGAGAAATCGGAAAAGGCCAATCGTACATCTTCTTGTCGAGAATGTACTTGTTGTAGACGATGACGGTGAAGCTGAGGAAGATCCAAATGGCGACATAGGTGTACGAGAGAACAATCTTCTTCAGAACACCTTCACTGAGAGAACCACCCTTGCCCATGGCGTCGATTTGGGGGAAAATGGCAATGAATCCGATGAGGAAGAACAAGAAATTTGCAGGAAATCCGAGAAATGGAGCAGAAGATTCAGCAATGGAGATTCAGAGAAAAGAACTGAGCTCGATTCGAGTACGAATCAGAGAGGGAAGATGAACGAGACGGAGAAATTTGGGAGAATATAAATAAATCGAACAATTAATGGTGAAGAAACACACACAGTCCACAGATCCATTACTGCTTCCATTGTAAATTCTTTCACTCAACAACTTCTAATGAACTCTAAGCATAAATTAATTTTGTTTAATTTTTTATTATTATTTTTTAAATCTTGAATTAATATTTACTATTCAATTTTAATATATTTTTTTCCTTAAATATGAATTTTATTTTTAAGATTTATCAAATCTAAAAAATAATTATGAAATTAAGAAAATATATATATATATCATAACCAATAATATGTGTTTATATTTTTTTAAATTAATTTAGCACAAATAAATTGATAATATAATTGGATTTTATTTATTTTGTATTTTGTTATATTTTTCTTTCCTTTTTTCTTTTTTTTTTTTCATTGGCCAAATAATGAAATAAAGAAAGTGTGGGGTCTGAAATGAAAAGAATCTTATTTTGTTGTCTTGTGTCCCAATTTTTAAATGATCGAGTGACTCCCATGTTTGAATTTGAATTTTGAATTTTGAAATAGTTTCTTTACCATTTTATTAAATACAATTTATGGAATAATAATTACGGATCGTAATAACTCAACCCCACTGCTAATAGATATATTTGCTTTACCATTTTATGTATCGTCATCAGCCTTATGATTTTAAAATGCATTTAGCTAATGACGATATATAACGAACCAAAGCAAACAATATCAACTAGTTATAGGATTGAACTGTTATAATTGATATCAGAATCAGTCACCAAATCGTGCAAGACACTGGTTAGAATAAGGCTAGATCATTTGCATAGTAGCATATTTTAAAACGGTGAGACTAACGATAATATATAATTGTCAGTATTTTTTTTGTATTCAAAATATTATTATTATTTAATCAATTTTGATAAATTAATATAACTAATTATTAAATTTATTGAAAGTAAGAGAATAAAATTAAATATTTGAAAGTATAAATATAAAATAAAATAAAACTCATACCACTATTTTAAATAATAAATATTTTTTTAACGATATTTTAAATAAAAATTTATTATATGGTCAAAATTGTAATATTTTAAAGTTTTAAGGCTAAAAATTTAGAATATATAATATAATGTTTATAATCGGTTTATATTTTTTTTTAAAAATGGCAATTAATTATTAATTTTTAATAAGATGGTAGTAAATAACTAAATTTTAAGTCAAAAGATTTTATTAATGGAATAAATGCCTTTAAATGGGGGGATTTTTCAATTGACCAAAATAAAAATCACGTGCAATGCACGTGACATTTGTCATTTTATTATAAATAAATATTACCTAAAAATGCCAACCCAATTTTGAAAATGAAGCCATTGAAGAATATATTTATATAAAAAAAAACAAGTTGAAATATATAATATAATTATTAGAAAATTAAAAAAAAACATTAAAATTGATATTCATTTAAATTTAATTTAAGGGTAGGGGAAAAAAAATAAAAAGGAAATTTATAGCAATGAAAAAAGGAAGGAAAAAGAAATAAAATATATATTTTTTACTAAAAAATTTAAAAATATTAATGCACATGGAATTAAAAACTTTAAAAATAATATTACAAATATACTAAGATCCAAAATTAAAAAATGCAATTTATTTTTTTGCCTTAAAAAATAAGAATTATTAAAGTTGGCAGTTAGCTGTAATTATAAGCGTTAATTAATAACGTCCTTTTAGTACAAAATAAGCAAAATAATTAAACAATTGAAAATAAAACAATTTTTATTTTTATTTTGAAAGGGAGCCACAAAATAAATAAATAAAAAGTACCTTTTTAACTTATTTAAAATTCGTACCAGGAAAATAAAAGGTTAAATTTTAAAATATCTACCTTCTTTCAACAAAAATTATAAATTTATTTTAATATTTAATAAATATTTTAAATTTTAAATTTTAAATTTAATTTAGTATCTTAATTACTATACTTTAATATTATTCCGTGCTATACTAAACAAATGTAATTTAATTTTAAAATAAGTAAAAAAAAATCAGCTAATTACCAATATTTATAATTATAATTGGTGAATTGTAATTACCAAATATATATATTAAAAAAATGAAAATACTACCATTGTTTAGGGGTGGATGATTTAATTTATAATTAAAATTAAAATTAAGATTTTTATTGTTTAACTAATAAAAAAATTAAAAGAGGACTCTTTTAAGAAAATTTAAATGCAATTATTGCACGTAAAATCCTGATCGTCCAATGGATTAAAGGAATAAAAGACAATCCAACCCTCCGAAATTAAATGTATCATAGTCAAAGTAAAATTGATGTTTACCTAAATGTTTCAATTAATCATTAATTACTTACAATTTTTAGTTTTATATTTTATTTTTAATGAAAATTACTAGAAATTTATTCTAAAAAATTAAAGAATTTTTTTATTAGAATTTTTTTGTTAAATAATAATAATAATAATAATTTTAATGAGGAAATTTTATTGGAAGTATAAGGAATGGGTAAAATGGTATTTTAACCTTTAAAATAAATTAAACAGATAGTTTTTCGTAGTCTAAAGCATTTGACAGGTAAGTATATGGAATTTCAATGGCGTCTTGGTTTTTCAGTACCTTGCAACTCAAAATTCTTCTCATTCTTGGAAATTCCTGTAGTGAACTATAAAAATCATTTGGAAATTCCTCGACTGTTATGTGTTCTCATTTGGTAATCGAATTCCTCAACAGTTGGAGGCTGTGGCAATCAGAAGCTCAACCTGATTAACAATGGCTTCCATTATTCTTCAGTTGCTGGATTCCTTCATCTAAATAGCAAGGTTCTGCTTCTCCTGTTTGAAATTTGTTTTTCGATTACTTAAAATGAAACGCAATGTGTATATTCTTTGGAAATTGAGACGGTACTGTGTTTCTGATCGAATAGACTGCGAAGAATGATCGGAACACAAAACCTAATGGCGTGATTTGTGATGATTGTGATGGAATCGATAGGTCGATTTATAACTTGTTGCTAATGATTTAGGTTTTGCGAACGCTGATTTTTTTGTAATTTGAATGAAATAGTTGCTGTTATTTTCTCATAATGCCAAGGAAGTGGAGTTGATGCTGTTGATTTCTTCAATGGACAATTCATAGCCGGTGCATCTTGTTGGTTGTGTGGGTAATCTGTGGCCTAATTCAACTATTTGATTCAGCGTCCAAATTACAACTGAAGAAGAAGTATTATAACATGCAATTGACTGATAAACTGAGCTGTTTCTATTTTCTCGCGTTTTCCCCTGAAAATTTGAATTCTACTTGTGTTGTTTGTTCTGTTGATCAATGGCTTTGTGTTGCAGTGGGAACAAAGGAAATGCTGTGTGGGAATTGCAAAGGAGATGGCTTCTTTGGAGGTTTTTCTCAGCACTTACGATCAATAGAGGTATGTATTGCTAGTTTGTTTATGCTTGTGCATATATTCAATATCATGTCATCAACAATGGCGGTAACATTTAGGCATACTGGTATCGTATTCAAGTTCCTGACAGTTAAGTCCTGGCAATCTTTCATATAAGATTTGGTACAGTTGTGAATCTCAGGAGGTCATTCTCTGATCAATCAGTTTTGCATTTTGTACTTTTGGTTTACTAATTGATAAATGCCTCATAAATAACATTAGCTTTTCATAGTTTGTGCAAATATGCTGTGTTCTGCATCTCAAGATGCTAATAGCTCTTCATGAATTGGCTCATCTGCTCTTGAAGCTAGTGGGTCGCCTCGGATTCAAGATAGAATACATGAAATACATGGACTCCCCCCTGCTGCAGCTTCCACTAGCTTAGGGGTCAAACCTATGACTTTATGCTCTAATCTAGAGAGCTACAGGCACATCCAGCATTCTTGTAAAATCTTGTAATCACTTTCCGAACATCTCATTCCTTTTATCCCATGC

mRNA sequence

ATGGATCATGGTAAGAGAAATCGGAAAAGGCCAATCGTACATCTTCTTGTCGAGAATGTACTTGTTGTAGACGATGACGGTGAAGCTGAGGAAGATCCAAATGGCGACATAGGTGTACGAGAGAACAATCTTCTTCAGAACACCTTCACTGAGAGAACCACCCTTGCCCATGGCGTCGATTTGGGGGAAAATGGCAATGAATCCGATGAGGAAGAACAAGAAATTTGCAGGAAATCCGAGAAATGGAGCAGAAGATTCAGCAATGGAGATTCAGAGAAAAGAACTGAGCTCGATTCGATTGGAGGCTGTGGCAATCAGAAGCTCAACCTGATTAACAATGGCTTCCATTATTCTTCAGTTGCTGGATTCCTTCATCTAAATAGCAAGTGGGAACAAAGGAAATGCTGTGTGGGAATTGCAAAGGAGATGGCTTCTTTGGAGGTTTTTCTCAGCACTTACGATCAATAGAGCTAGTGGGTCGCCTCGGATTCAAGATAGAATACATGAAATACATGGACTCCCCCCTGCTGCAGCTTCCACTAGCTTAGGGGTCAAACCTATGACTTTATGCTCTAATCTAGAGAGCTACAGGCACATCCAGCATTCTTGTAAAATCTTGTAATCACTTTCCGAACATCTCATTCCTTTTATCCCATGC

Coding sequence (CDS)

ATGGATCATGGTAAGAGAAATCGGAAAAGGCCAATCGTACATCTTCTTGTCGAGAATGTACTTGTTGTAGACGATGACGGTGAAGCTGAGGAAGATCCAAATGGCGACATAGGTGTACGAGAGAACAATCTTCTTCAGAACACCTTCACTGAGAGAACCACCCTTGCCCATGGCGTCGATTTGGGGGAAAATGGCAATGAATCCGATGAGGAAGAACAAGAAATTTGCAGGAAATCCGAGAAATGGAGCAGAAGATTCAGCAATGGAGATTCAGAGAAAAGAACTGAGCTCGATTCGATTGGAGGCTGTGGCAATCAGAAGCTCAACCTGATTAACAATGGCTTCCATTATTCTTCAGTTGCTGGATTCCTTCATCTAAATAGCAAGTGGGAACAAAGGAAATGCTGTGTGGGAATTGCAAAGGAGATGGCTTCTTTGGAGGTTTTTCTCAGCACTTACGATCAATAG

Protein sequence

MDHGKRNRKRPIVHLLVENVLVVDDDGEAEEDPNGDIGVRENNLLQNTFTERTTLAHGVDLGENGNESDEEEQEICRKSEKWSRRFSNGDSEKRTELDSIGGCGNQKLNLINNGFHYSSVAGFLHLNSKWEQRKCCVGIAKEMASLEVFLSTYDQ
Homology
[Close]
BLAST of CmaCh01G014990 vs. TrEMBL
Match: A0A0Q3EYB5_BRADI (Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_4g43326 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.1e-06
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 1   MDHGKRNRKRPIVHLLVENVLVVDDDGEAEEDPNGDIGVRENNLLQNTFTERTTLAHG 59
           +DHG+R+R+RP+VHL V++VLVVDD  EA+ DP G +GVRE +  ++    R     G
Sbjct: 259 VDHGERDRERPVVHLRVQDVLVVDDHREAQADPYGYVGVREEHRPEHRCRRRRRRGRG 316

[Close]
BLAST of CmaCh01G014990 vs. TrEMBL
Match: A0A151SLN1_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_001905 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-06
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 1 

Query: 1   MDHGKRNRKRPIVHLLVENVLVVDDDGEAEEDPNGDIGVRENNLLQNTFTERTTL 56
           +DHG+R+R  P+VHL ++NVLVV DD EAEEDP   +GV E++ L +   +R  L
Sbjct: 89  VDHGERDRVWPVVHLPIQNVLVVHDDREAEEDPYRHVGVGEDDFLHHAVGDRHCL 143

[Close]
BLAST of CmaCh01G014990 vs. NCBI nr
Match: gi|944056752|gb|KQJ92390.1| (hypothetical protein BRADI_4g43326 [Brachypodium distachyon])

HSP 1 Score: 60.5 bits (145), Expect = 3.1e-06
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = 1 

Query: 1   MDHGKRNRKRPIVHLLVENVLVVDDDGEAEEDPNGDIGVRENNLLQNTFTERTTLAHG 59
           +DHG+R+R+RP+VHL V++VLVVDD  EA+ DP G +GVRE +  ++    R     G
Sbjct: 259 VDHGERDRERPVVHLRVQDVLVVDDHREAQADPYGYVGVREEHRPEHRCRRRRRRGRG 316

[Close]
BLAST of CmaCh01G014990 vs. NCBI nr
Match: gi|1012344491|gb|KYP55683.1| (hypothetical protein KK1_001905, partial [Cajanus cajan])

HSP 1 Score: 59.7 bits (143), Expect = 5.2e-06
Identity = 28/55 (50.91%), Postives = 39/55 (70.91%), Query Frame = 1 

Query: 1   MDHGKRNRKRPIVHLLVENVLVVDDDGEAEEDPNGDIGVRENNLLQNTFTERTTL 56
           +DHG+R+R  P+VHL ++NVLVV DD EAEEDP   +GV E++ L +   +R  L
Sbjct: 89  VDHGERDRVWPVVHLPIQNVLVVHDDREAEEDPYRHVGVGEDDFLHHAVGDRHCL 143

The following BLAST results are available for this feature:
BLAST of CmaCh01G014990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh01G014990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0Q3EYB5_BRADI2.1e-0648.28Uncharacterized protein OS=Brachypodium distachyon GN=BRADI_4g43326 PE=4 SV=1[more]
A0A151SLN1_CAJCA3.7e-0650.91Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_001905 PE=4 SV=1[more]
BLAST of CmaCh01G014990 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh01G014990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|944056752|gb|KQJ92390.1|3.1e-0648.28hypothetical protein BRADI_4g43326 [Brachypodium distachyon][more]
gi|1012344491|gb|KYP55683.1|5.2e-0650.91hypothetical protein KK1_001905, partial [Cajanus cajan][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G014990.1CmaCh01G014990.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh01G014990Carg00448Silver-seed gourdcarcmaB0947
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh01G014990Cucumber (Chinese Long) v3cmacucB0529
CmaCh01G014990Cucumber (Chinese Long) v3cmacucB0531
CmaCh01G014990Cucumber (Chinese Long) v3cmacucB0535
CmaCh01G014990Cucumber (Chinese Long) v3cmacucB0548
CmaCh01G014990Cucumber (Chinese Long) v3cmacucB0559
CmaCh01G014990Watermelon (97103) v2cmawmbB453
CmaCh01G014990Watermelon (97103) v2cmawmbB476
CmaCh01G014990Watermelon (97103) v2cmawmbB482
CmaCh01G014990Watermelon (97103) v2cmawmbB507
CmaCh01G014990Wax gourdcmawgoB0622
CmaCh01G014990Wax gourdcmawgoB0627
CmaCh01G014990Cucurbita maxima (Rimu)cmacmaB044
CmaCh01G014990Cucurbita maxima (Rimu)cmacmaB055
CmaCh01G014990Cucurbita maxima (Rimu)cmacmaB183
CmaCh01G014990Cucurbita maxima (Rimu)cmacmaB432
CmaCh01G014990Cucurbita maxima (Rimu)cmacmaB434
CmaCh01G014990Cucumber (Gy14) v1cgycmaB0457
CmaCh01G014990Cucumber (Gy14) v1cgycmaB0756
CmaCh01G014990Cucumber (Gy14) v1cgycmaB0863
CmaCh01G014990Cucumber (Gy14) v1cgycmaB0865
CmaCh01G014990Cucurbita moschata (Rifu)cmacmoB431
CmaCh01G014990Cucurbita moschata (Rifu)cmacmoB440
CmaCh01G014990Cucurbita moschata (Rifu)cmacmoB455
CmaCh01G014990Cucurbita moschata (Rifu)cmacmoB468
CmaCh01G014990Wild cucumber (PI 183967)cmacpiB446
CmaCh01G014990Wild cucumber (PI 183967)cmacpiB448
CmaCh01G014990Wild cucumber (PI 183967)cmacpiB459
CmaCh01G014990Wild cucumber (PI 183967)cmacpiB472
CmaCh01G014990Cucumber (Chinese Long) v2cmacuB443
CmaCh01G014990Cucumber (Chinese Long) v2cmacuB445
CmaCh01G014990Cucumber (Chinese Long) v2cmacuB456
CmaCh01G014990Cucumber (Chinese Long) v2cmacuB469
CmaCh01G014990Melon (DHL92) v3.5.1cmameB411
CmaCh01G014990Melon (DHL92) v3.5.1cmameB418
CmaCh01G014990Melon (DHL92) v3.5.1cmameB446
CmaCh01G014990Watermelon (Charleston Gray)cmawcgB409
CmaCh01G014990Watermelon (Charleston Gray)cmawcgB414
CmaCh01G014990Watermelon (Charleston Gray)cmawcgB438
CmaCh01G014990Watermelon (97103) v1cmawmB425
CmaCh01G014990Watermelon (97103) v1cmawmB436
CmaCh01G014990Watermelon (97103) v1cmawmB443
CmaCh01G014990Cucurbita pepo (Zucchini)cmacpeB490
CmaCh01G014990Cucurbita pepo (Zucchini)cmacpeB502
CmaCh01G014990Cucurbita pepo (Zucchini)cmacpeB512
CmaCh01G014990Bottle gourd (USVL1VR-Ls)cmalsiB430
CmaCh01G014990Bottle gourd (USVL1VR-Ls)cmalsiB433
CmaCh01G014990Bottle gourd (USVL1VR-Ls)cmalsiB460
CmaCh01G014990Cucumber (Gy14) v2cgybcmaB204
CmaCh01G014990Cucumber (Gy14) v2cgybcmaB207
CmaCh01G014990Cucumber (Gy14) v2cgybcmaB369
CmaCh01G014990Cucumber (Gy14) v2cgybcmaB508
CmaCh01G014990Melon (DHL92) v3.6.1cmamedB474
CmaCh01G014990Melon (DHL92) v3.6.1cmamedB481
CmaCh01G014990Silver-seed gourdcarcmaB0186
CmaCh01G014990Silver-seed gourdcarcmaB0894
CmaCh01G014990Silver-seed gourdcarcmaB0898
CmaCh01G014990Silver-seed gourdcarcmaB1353