CmaCh01G008550 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G008550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Location	Cma_Chr01 : 4813378 .. 4814136 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATTTGTGAACAATGTGGATACCATTTGAAAATGAGTAGTTCAGATAGAATCGAACTTTTGATTGATCCAGGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGTAAATTAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTCAGTTTATGGGGGTAGTATGGGATCTGTAGTAGGCGAGAAAATCACCCGTTTGATCGAGGTGGAAACCTTAAGAAACCTCAAGGAAAAATCCAAAAGGAAAAGCACAAATAGAACAATATATGCTAGTGGTCGACTTGAGTCTGGACCGTTTTCTTGTGATTTCCCTGGGGATAGACACGAGGTGATGTGCCGGATGCTGGCCCCAAAGGAGTGGAATGAGTGGGGGTCCCACATCCATTGAAAATTTTTCAAAGAATTTGGATCAAGTTGCTTTCTTAAGCCTTTACACGAGGGACTTGATTGTCCACTCTCTTTGAGATGAAAACTAGGTTCATTTTCTTTACTTTTCACGTTCTTCGTGGGGGATCATCTTTATCTCAATAGTCTCCGTCTTAATTTCGAATCCTTTTTCAATGTCTTTGCTCATTCTTTAGCATGATGTATAGGGCTCAAAAGCTAACTTTAGAGTTATGAAAAGAGCCGAAATTGGATTGCATTAG

mRNA sequence

ATGAATATTTGTGAACAATGTGGATACCATTTGAAAATGAGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGTAAATTAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTCAGTTTATGGGGGTAGGCTCAAAAGCTAACTTTAGAGTTATGAAAAGAGCCGAAATTGGATTGCATTAG

Coding sequence (CDS)

ATGAATATTTGTGAACAATGTGGATACCATTTGAAAATGAGTACTTGGGACCCTATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACAGGATTAACTGAGGCTATTCAAACAGGCACAGGTAAATTAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTCAGTTTATGGGGGTAGGCTCAAAAGCTAACTTTAGAGTTATGAAAAGAGCCGAAATTGGATTGCATTAG

Protein sequence

MNICEQCGYHLKMSTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIKTGLTEAIQTGTGKLNGIPIAIGIMDFQFMGVGSKANFRVMKRAEIGLH

Homology

[Close]

BLAST of CmaCh01G008550 vs. Swiss-Prot
Match: ACCD_EUCGG (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=accD PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-36
Identity = 75/106 (70.75%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNIC+QCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 248 MNICDQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 307

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLT+A+QTGTG+LNGIPIAIG+MDFQFMG  +GS    ++ +  E
Sbjct: 308 TGLTDAVQTGTGRLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIE 353

[Close]

BLAST of CmaCh01G008550 vs. Swiss-Prot
Match: ACCD_SOLTU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Solanum tuberosum GN=accD PE=2 SV=3)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-36
Identity = 75/106 (70.75%), Postives = 83/106 (78.30%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 241 MNICEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 300

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTG G+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 301 TGLTEAVQTGIGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 346

[Close]

BLAST of CmaCh01G008550 vs. Swiss-Prot
Match: ACCD_SOLLC (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Solanum lycopersicum GN=accD PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-36
Identity = 75/106 (70.75%), Postives = 83/106 (78.30%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 241 MNICEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 300

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTG G+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 301 TGLTEAVQTGIGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 346

[Close]

BLAST of CmaCh01G008550 vs. Swiss-Prot
Match: ACCD_SOLBU (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Solanum bulbocastanum GN=accD PE=3 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-36
Identity = 75/106 (70.75%), Postives = 83/106 (78.30%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 241 MNICEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 300

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTG G+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 301 TGLTEAVQTGIGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 346

[Close]

BLAST of CmaCh01G008550 vs. Swiss-Prot
Match: ACCD_NICTO (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Nicotiana tomentosiformis GN=accD PE=3 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 2.3e-36
Identity = 78/109 (71.56%), Postives = 85/109 (77.98%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 246 MNICEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 305

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG------VGSKANFRVMKRA 92
           TGLTEA+QTG G+LNGIP+AIG+MDFQFMG      VG K   R+++RA
Sbjct: 306 TGLTEAVQTGIGQLNGIPVAIGVMDFQFMGGSMGSVVGEKIT-RLIERA 353

[Close]

BLAST of CmaCh01G008550 vs. TrEMBL
Match: D3WF96_STACO (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Staphylea colchica GN=accD PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-35
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MN+CEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 252 MNVCEQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 311

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTGKLNGIPIAIG+MDFQFMG  +GS    ++ +  E
Sbjct: 312 TGLTEAVQTGTGKLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIE 357

[Close]

BLAST of CmaCh01G008550 vs. TrEMBL
Match: A0A158N6E3_CERCN (Acetyl-CoA carboxylase carboxyltransferase beta subunit OS=Cercis canadensis GN=accD PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 3.0e-35
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TW+PMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK
Sbjct: 250 MNICEQCGYHLKMSGSDRIELSIDPGTWNPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 309

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 310 TGLTEAVQTGTGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 355

[Close]

BLAST of CmaCh01G008550 vs. TrEMBL
Match: M4H084_9ROSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Francoa sonchifolia GN=accD PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.0e-35
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 245 MNICEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 304

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIPIAIG+MDFQFMG  +GS    ++ +  E
Sbjct: 305 TGLTEAVQTGTGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIE 350

[Close]

BLAST of CmaCh01G008550 vs. TrEMBL
Match: F2X0C5_HEVBR (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Hevea brasiliensis GN=accD PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.2e-35
Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 249 MNICEQCGYHLKMSSSDRIELLIDLGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 308

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 309 TGLTEAVQTGTGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 354

[Close]

BLAST of CmaCh01G008550 vs. TrEMBL
Match: G1D767_RICCO (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Ricinus communis GN=accD PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 5.2e-35
Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 251 MNICEQCGYHLKMSSSDRIELSIDLGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 310

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 311 TGLTEAVQTGTGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 356

[Close]

BLAST of CmaCh01G008550 vs. TAIR10
Match: ATCG00500.1 (ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta)

HSP 1 Score: 132.1 bits (331), Expect = 1.8e-31
Identity = 63/106 (59.43%), Postives = 81/106 (76.42%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MN+CEQCG++LKMS            TW+PMDEDMVS DPI+FHS+EEPYK+RIDS Q  
Sbjct: 244 MNVCEQCGHYLKMSSSERIELSIDPGTWNPMDEDMVSADPIKFHSKEEPYKNRIDSAQKT 303

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLT+A+QTGTG+LNGIP+A+G+MDF+FMG  +GS    ++ +  E
Sbjct: 304 TGLTDAVQTGTGQLNGIPVALGVMDFRFMGGSMGSVVGEKITRLIE 349

[Close]

BLAST of CmaCh01G008550 vs. NCBI nr
Match: gi|290490509|gb|ADD31611.1| (acetyl-CoA carboxylase carboxyltransferase beta subunit protein (chloroplast) [Staphylea colchica])

HSP 1 Score: 156.4 bits (394), Expect = 2.5e-35
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MN+CEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 252 MNVCEQCGYHLKMSSSDRIELSIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 311

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTGKLNGIPIAIG+MDFQFMG  +GS    ++ +  E
Sbjct: 312 TGLTEAVQTGTGKLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIE 357

[Close]

BLAST of CmaCh01G008550 vs. NCBI nr
Match: gi|584458752|gb|AHI95876.1| (acetyl-CoA carboxylase carboxyltransferase beta subunit (chloroplast) [Cercis canadensis])

HSP 1 Score: 155.6 bits (392), Expect = 4.3e-35
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TW+PMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK
Sbjct: 250 MNICEQCGYHLKMSGSDRIELSIDPGTWNPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 309

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 310 TGLTEAVQTGTGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 355

[Close]

BLAST of CmaCh01G008550 vs. NCBI nr
Match: gi|501770863|ref|YP_007889870.1| (acetyl-CoA carboxylase carboxyltransferase beta subunit [Francoa sonchifolia])

HSP 1 Score: 155.2 bits (391), Expect = 5.7e-35
Identity = 77/106 (72.64%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 245 MNICEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 304

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIPIAIG+MDFQFMG  +GS    ++ +  E
Sbjct: 305 TGLTEAVQTGTGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIE 350

[Close]

BLAST of CmaCh01G008550 vs. NCBI nr
Match: gi|372450148|ref|YP_005090187.1| (acetyl-CoA carboxylase beta subunit (chloroplast) [Ricinus communis])

HSP 1 Score: 154.8 bits (390), Expect = 7.4e-35
Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 251 MNICEQCGYHLKMSSSDRIELSIDLGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 310

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 311 TGLTEAVQTGTGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 356

[Close]

BLAST of CmaCh01G008550 vs. NCBI nr
Match: gi|223523670|gb|EEF27141.1| (carboxyl-tansferase, subunit of Het-ACCase, partial [Ricinus communis])

HSP 1 Score: 154.8 bits (390), Expect = 7.4e-35
Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 1


Query: 1   MNICEQCGYHLKMS------------TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQIK 60
           MNICEQCGYHLKMS            TWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQ K
Sbjct: 27  MNICEQCGYHLKMSSSDRIELSIDLGTWDPMDEDMVSLDPIEFHSEEEPYKDRIDSYQRK 86

Query: 61  TGLTEAIQTGTGKLNGIPIAIGIMDFQFMG--VGSKANFRVMKRAE 93
           TGLTEA+QTGTG+LNGIP+AIG+MDFQFMG  +GS    ++ +  E
Sbjct: 87  TGLTEAVQTGTGQLNGIPVAIGVMDFQFMGGSMGSVVGEKITRLIE 132

The following BLAST results are available for this feature:

BLAST of CmaCh01G008550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ACCD_EUCGG	1.4e-36	70.75	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_SOLTU	2.3e-36	70.75	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_SOLLC	2.3e-36	70.75	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_SOLBU	2.3e-36	70.75	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
ACCD_NICTO	2.3e-36	71.56	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh01G008550 vs. TrEMBL


Match Name	E-value	Identity	Description
D3WF96_STACO	1.8e-35	72.64	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A0A158N6E3_CERCN	3.0e-35	71.70	Acetyl-CoA carboxylase carboxyltransferase beta subunit OS=Cercis canadensis GN=...	[more]
M4H084_9ROSI	4.0e-35	72.64	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Francoa sonch...	[more]
F2X0C5_HEVBR	5.2e-35	71.70	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
G1D767_RICCO	5.2e-35	71.70	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh01G008550 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG00500.1	1.8e-31	59.43	ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]

BLAST of CmaCh01G008550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|290490509\|gb\|ADD31611.1\|	2.5e-35	72.64	acetyl-CoA carboxylase carboxyltransferase beta subunit protein (chloroplast) [S...	[more]
gi\|584458752\|gb\|AHI95876.1\|	4.3e-35	71.70	acetyl-CoA carboxylase carboxyltransferase beta subunit (chloroplast) [Cercis ca...	[more]
gi\|501770863\|ref\|YP_007889870.1\|	5.7e-35	72.64	acetyl-CoA carboxylase carboxyltransferase beta subunit [Francoa sonchifolia]	[more]
gi\|372450148\|ref\|YP_005090187.1\|	7.4e-35	71.70	acetyl-CoA carboxylase beta subunit (chloroplast) [Ricinus communis]	[more]
gi\|223523670\|gb\|EEF27141.1\|	7.4e-35	71.70	carboxyl-tansferase, subunit of Het-ACCase, partial [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:2001295	malonyl-CoA biosynthetic process
biological_process	GO:0006090	pyruvate metabolic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009570	chloroplast stroma
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G008550.1	CmaCh01G008550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22855	ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED	coord: 1..78 score: 3.2
None	No IPR available	PANTHER	PTHR22855:SF15	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC	coord: 1..78 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G008550	Cucumber (Chinese Long) v3	cmacucB0576
CmaCh01G008550	Watermelon (97103) v2	cmawmbB499
CmaCh01G008550	Watermelon (97103) v2	cmawmbB500
CmaCh01G008550	Wax gourd	cmawgoB0556
CmaCh01G008550	Cucurbita maxima (Rimu)	cmacmaB057
CmaCh01G008550	Cucumber (Gy14) v1	cgycmaB0661
CmaCh01G008550	Cucurbita moschata (Rifu)	cmacmoB438
CmaCh01G008550	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G008550	Wild cucumber (PI 183967)	cmacpiB486
CmaCh01G008550	Cucumber (Chinese Long) v2	cmacuB483
CmaCh01G008550	Melon (DHL92) v3.5.1	cmameB383
CmaCh01G008550	Watermelon (Charleston Gray)	cmawcgB430
CmaCh01G008550	Watermelon (97103) v1	cmawmB417
CmaCh01G008550	Watermelon (97103) v1	cmawmB418
CmaCh01G008550	Cucurbita pepo (Zucchini)	cmacpeB490
CmaCh01G008550	Cucurbita pepo (Zucchini)	cmacpeB510
CmaCh01G008550	Bottle gourd (USVL1VR-Ls)	cmalsiB453
CmaCh01G008550	Cucumber (Gy14) v2	cgybcmaB633
CmaCh01G008550	Melon (DHL92) v3.6.1	cmamedB443
CmaCh01G008550	Silver-seed gourd	carcmaB0219
CmaCh01G008550	Silver-seed gourd	carcmaB0954