CmaCh01G008450 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGAACATGTACTTATTCTAAGTGCCTATTTCTTTTCCATCGGTATCTATGGATTGATCACGATCCGAAATATGGTTAGGGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATGTATGAATTTTGTAACATTTTCTTGATAGTCGCCAAAGGGAATATTTTCTCAATTTTGGTTATAGCTATTGCACTAAAGCAGCTATTGGCCCAACTATTGTTTCGTCAATTTCTCGTAACAGAAAAGAAACTCATATCAATCAATCGAATTTGTTGAATAAGTAG ATGCTCGAACATGTACTTATTCTAAGTGCCTATTTCTTTTCCATCGGTATCTATGGATTGATCACGATCCGAAATATGGTTAGGGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATTCGCCAAAGGGAATATTTTCTCAATTTTGGTTATAGCTATTGCACTAAAGCAGCTATTGGCCCAACTATTGTTTCGTCAATTTCTCGTAACAGAAAAGAAACTCATATCAATCAATCGAATTTGTTGAATAAGTAG ATGCTCGAACATGTACTTATTCTAAGTGCCTATTTCTTTTCCATCGGTATCTATGGATTGATCACGATCCGAAATATGGTTAGGGCCCTTATGTGTCTTGAGCTTATACTGAATGCAGTTAATATTCGCCAAAGGGAATATTTTCTCAATTTTGGTTATAGCTATTGCACTAAAGCAGCTATTGGCCCAACTATTGTTTCGTCAATTTCTCGTAACAGAAAAGAAACTCATATCAATCAATCGAATTTGTTGAATAAGTAG MLEHVLILSAYFFSIGIYGLITIRNMVRALMCLELILNAVNIRQREYFLNFGYSYCTKAAIGPTIVSSISRNRKETHINQSNLLNK
BLAST of CmaCh01G008450 vs. Swiss-Prot
Match: NU4LC_ILLOL (NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Illicium oligandrum GN=ndhE PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 4.9e-22 Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. Swiss-Prot
Match: NU4LC_VITVI (NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Vitis vinifera GN=ndhE PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 4.9e-22 Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. Swiss-Prot
Match: NU4LC_MORIN (NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Morus indica GN=ndhE PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.4e-22 Identity = 65/104 (62.50%), Postives = 69/104 (66.35%), Query Frame = 1
BLAST of CmaCh01G008450 vs. Swiss-Prot
Match: NU4LC_DRIGR (NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Drimys granadensis GN=ndhE PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 6.4e-22 Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. Swiss-Prot
Match: NU4LC_CHLSC (NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Chloranthus spicatus GN=ndhE PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.4e-22 Identity = 64/100 (64.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. TrEMBL
Match: A0A158N6I9_CERCN (NADH-plastoquinone oxidoreductase subunit 4L OS=Cercis canadensis GN=ndhE PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-20 Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. TrEMBL
Match: A0A142G678_ASTMO (NADH dehydrogenase subunit 4L OS=Astragalus mongholicus GN=ndhE PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20 Identity = 66/100 (66.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. TrEMBL
Match: A0A0K0LVC9_9FABA (NADH-quinone oxidoreductase subunit K OS=Oxytropis lambertii GN=ndhE PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20 Identity = 66/100 (66.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. TrEMBL
Match: A0A0U2L131_9FABA (NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic OS=Astragalus nakaianus GN=ndhE PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20 Identity = 66/100 (66.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. TrEMBL
Match: A0A0K0LUM9_9FABA (NADH-quinone oxidoreductase subunit K OS=Astragalus canadensis GN=ndhE PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20 Identity = 66/100 (66.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. TAIR10
Match: ATCG01070.1 (ATCG01070.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L) HSP 1 Score: 93.6 bits (231), Expect = 6.4e-20 Identity = 60/100 (60.00%), Postives = 68/100 (68.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. NCBI nr
Match: gi|584458793|gb|AHI95917.1| (NADH-plastoquinone oxidoreductase subunit 4L (chloroplast) [Cercis canadensis]) HSP 1 Score: 107.1 bits (266), Expect = 1.6e-20 Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. NCBI nr
Match: gi|944543010|ref|YP_009175810.1| (NADH dehydrogenase subunit 4L (chloroplast) [Astragalus nakaianus]) HSP 1 Score: 106.7 bits (265), Expect = 2.1e-20 Identity = 66/100 (66.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. NCBI nr
Match: gi|1002165462|ref|YP_009235593.1| (NdhE (chloroplast) [Cynanchum wilfordii]) HSP 1 Score: 106.3 bits (264), Expect = 2.7e-20 Identity = 65/104 (62.50%), Postives = 69/104 (66.35%), Query Frame = 1
BLAST of CmaCh01G008450 vs. NCBI nr
Match: gi|657302913|ref|YP_009041139.1| (NADH dehydrogenase subunit 4L [Rhazya stricta]) HSP 1 Score: 105.9 bits (263), Expect = 3.5e-20 Identity = 66/100 (66.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of CmaCh01G008450 vs. NCBI nr
Match: gi|748992348|gb|AJE72772.1| (NADH dehydrogenase subunit 4L (plastid) [Astragalus crassicarpus]) HSP 1 Score: 105.9 bits (263), Expect = 3.5e-20 Identity = 65/100 (65.00%), Postives = 70/100 (70.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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