CmaCh01G004840 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G004840
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RNA-binding LUC7-like protein
Location	Cma_Chr01 : 2456689 .. 2464486 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAATGTGGAAATCCACCCTGACACCCGAAAAAGATTTGACCCGGAAACTCTAAATCAAATCAAACCCTAATTCTGTATTTGCTTCCGATAGCCTCGCTCCTTGAGCAGAGACACCCTTTGGGGAGAAGGTTTTCCTAGAGAGATCTACGCAGAGACAGCCATGGATGCTTTTAGAAGGCAACTGGACCAGCTAATGGGTGCCAATCGAAATGGCGACGTGCAGGAAGTTAGCCGCAAGTACTACGACCGCGATGTGTGCCGCATGTTCTTAGTTGGGCTTTGTCCTCATGAACTCTTCCAACTCACGGTTAGATCAATTCATGTTTTCATCTATTTCCTACTGAGTTTCTCGTTTCTTGCTTCTTCGATTTCTTTTGTTAGTCAGAATACTGGCGACTCGTATTTTTTATGCTGTTATTGGTTGGTTCTCGGGTTTTTGTTGGTTTAGTTGCTAGGAAAAATCAGGGTGATCAGCCGTCTTGAAATGGAAAAGTGGAGAGGAAAAATGCCGAGGATAATTTATTTTGTTGCAGTGGGAAATTGATTTTTGCTATCGATGATTTGTGTTTTATTGCTGTTGGTAAAATTTTAACTTATTTGTATAATATTTTAATTGAAATTCATTTTCTGTTTCAGAAAATGGATATGGGTCCATGCCCGAAGATCCACTCCTTGCAACTTAGGAAAGAGTATCCTTGATTAAGTTACAGGGTGTTTGTTTTTTATTGCATTGCTGGAAGTACTTCGACGTATTTCTTTTATTATACCTTACTATCGTGCTGAGCCTTGGAGTTGGTTAATTTGCTATCATAATTTGGCTTGAAAATGGAAGTTTTATTATGCGGTAGTCAATTTTTAGGAGTTTCTGGAAGGGGACTCATACCGTTCAGTCAACTCTATACTGTATTTTTTGTGAAGATTTATAATTTTCGTGAACAATAAAGGGGACTGCACCATGTAGATGTTACTTCATAAAAAACCCTTTCTCAAGTTGTATAAATTTCTACCTTTCTAAGTCTAAATTAGTTTAAGGGATTCCTAATTACATAAAGGCAATTAGGTGGAATTGGAAGATTTCAAATGTGGTTCGTTTGTTTCCCAGAGGTTCTTTTAACTCTTTCTAGATATGAAGAAGCAAAGACTAAAGGGGTTCATAACTACGACAGAGACTTGGAGGATGTTATAGATCGTCTCATTATTGAGTGTGATAGAAAAATTGCTAGAGCCTTGAAGCGACTTGAGGAGGAAGATGCAAAAGCAGCTATTGCAATTTCTGTCTCTGAAGTCACCCAGGTACTTGTCCTTGGTGATCTAATTTTTTTTTTTTAATATATAAGAAACTTGAGTTACATGAGGTGATGCATATATAATTCCATTTATCTATTTAATTGATTGTTATTACAGATACCTGAGGTTCTTGAGTTATCAAAGCAAATTAAAGAGAAGTTGAAAGAAGCCGACCAATATGGTATTTTTATTTCAATTGGTGGAAGAATTGTATAGTTTCTTTATTGAATCAATTTTTCTTAAATATCAAGATATATCTTTCCATATAATTGATTGCTTATCTTTTTATATTGGAATAGTCAGAATTGTGTCAAAATGTTAACAATCCCCAATCATTCGCAATTCTGTTACCCTATTACGAGTGGTGGATAATGTTTTATTTTTCAATTGGAAGTGCATGTACGAAACCTTGAGTGGTGGGGTGCATGTGTTTGAGTTTTGGGCTCGTATTTATTTGTATCTCTTTTGGAAGCAATGAATCCTATCTTTTCTGATGTAATTTTTTTTTAAAAAAATTTGATCAATTGATTTTTTTGATAATCTAAAAAGTGGGTCAATGCTGTTTTGATTGCTTTGTTACCTTACATCTAAAGGTTATAGATCTAGTAGGTCGATGCTTATAAACACAAACATTTTGTTTTTAGCAAACTGTCCATATTTGACATGTCCACAGCATGGACATGCTGGAACTCGAAAAAACATCCTAAACTGAGTGTTTATTACTTTCTAATTTTGTTGGCACTCGAAAAAAACATCCTAAAGGATTTGTTTTTTTTTTTTTTAATTTAATTTAATTTTTTATGGAATTATACTAGTCAGCCACTTTTTATTAAATATATAAGGCTGTTTTAGCCATACCCGGAAACCTTGTTAAACAGATACATAGAGTGAACTGATGGATGAGAAAATTGGATCCAATCTCTAGTGAATGAGGGTTTAAGATCCATTGCAATCCAATCTCTAGTAGTTCCTAGGAGTAGGAAGATAGATAAGGATCATCAAGGTTTGAGGGCTACCTTGTGCTTCCTAAGGAAGTGATGTTGAAGTGGAAGCTATCAACAAAGAATTTTGACCGATTTTTTTGTTCCATCGAACAATTATCCAGTCCCCACAATGGGACGTTGACCACCACCACAAATAAGGCTCACTCACCCATCAGTGCTCATTTGGAACATCTATGAATAAAAAAGCAACTAAAAGAAGACCAGGTTTCCTTTGGCCTTGGTGGTAATGTCAGGCCTCCTGTTTTAAACTCCTGTTAATTGGGAAATAGAGTGTCTGTGAGTTAGTAGTGTATGTTCCTTATAACTTGAGGAAATGGCGGGGTGGAAAGGACTGCTGTTTCAGGAAGTGCCCACTTCCAAATTGGCGATAGAATGTCTGTGCTGATCTTCACTCCTTTTTGCTCAATATACATAAATGACACTCCAATGCCGGACAATATATATTGAGCTTGAGGATGTTGTCTGTTTATGTTACTTCAGTTCAAAAAATTGTGCTGTGTTTACATATGAAGAACTTGTAAAATGTCTGTGCTGAGATTTGTTTCTTTCTCCTTTCCTTTCTATTTGTTGGCTTATACTTGTTTTTTATTTGATTGATCGCTTCTAGTACTTTTATCGAGAAGTTGAAGCTAAGAAAGTCTTTCTTTATATGACTTGAAACTTTCTATCAAATATTGCAGATCTTGAGGGCAAGACAGATCTTAAAATTCGAGTTTTGGAGGTTGTAGAAGAGTTGAGGACATTACGAGCTGACAAACAGGTACATATAATATTTTTGGATGTAAAATAGTTGAACCTTCTATCTCTATGCTTATAGTTTTAACCACAATAGATGTCATAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTACATGCAAAGTGAGTAATCTAACTTTTAAATGAATTTTTAACAGTCGATGCTTCTTTTAGACGCTTTTAACAAAGATAGGGCATCTTTGCCTCAACCTCTGCCAAACCCACCGCCTCTGGCTCCTTTGCCTGTTGTAGCTCCTGATCCTCGTACACAGGAGATGATAAATGAGAAGTTGAAGAAGGCTGAGGAACTTGGTATGTTTTATTCAATATAACACTAGGCTACATTTTGAATTTCTGAGTGAAGTATGTCAGAATAACGTTTGTTCATCGTATCATTTATTTTTTGATGAAATGATTGATAATAATTGAAATGTAATTGTGTGTAGAACTAATAGTTGTCAGTTGCATGAGGATTGTACGTTTACTTTTTGCACTTCTGCTAATTAGTGGTGTTAATTTCTACAGGTGAGCAAGGAATGATTGACGAGGCTCAAAAAGCATTGGAGGAAGCTGAAGCACTCAAGAAGGTTTGTCTCTCATTCTTTAGCAGAGACTATGTACATCTATGTTTTCTACTTTTCGTAAGCACTTCTCATTTTTGTTCAGCTACCAGCTAGGCAGGAGCCAGTGATGGATTCTTCCAAATATACTGCTGCTGATGTGCGAATTGTGAGTCTTCTTTTTCTCGTGAAACCTACTCATCTCTTTCGCAAAACATGATGCATTTCCTTTCCACTTTAAAACCACTTCAGTATTAGAATATCCACATAAAAAGCTATTTATGCCATGGGTAACGATCAATGTTTTTCATCTTGGGTCTGTTCCATCTCAATATGTGGATGTAGATATGGCTTTTCATATCATCAAGGAAAACATTTCTTCCAAATATATATTTATTTATTTATGGCTTGTTTGGGACTTATCTTAGTAATTTATTCTTGAGATGCATAAATAGTGCACCTTGGATTAGCAAAAGTTATGTTAACATTGACATAATTATGTTAACCTTGGATTAGCTGTGGTGACGGAATTTTGCAATTTAGTTGTCTGAAGATTTCTGCTGTGATGTTTAATAAATGTTAAAAGAAATGGTTAAAGACATCAAACAAATGAACTTGGCAATTGTTAAGTGGGTGGCTGCAATAATATGGCTCGAGTTTATTATAAAGTTCAAAGCTTACAAATTTATTTGTATCTTATATGAATAATCAAGTAATTTCACTTGTTTTGTATTTACCCAGACGGATCAAAAGCTGCGTGTGTGTGACATTTGTGGAGCATTTTTAAGCGTTTATGACAGGTAAAATTTGACTCTACAACTTATACATGTTCTTTTAATGATCTATGTTTTTTGAGGAAAATGTAAAGTTAGTATTTGGGGTTTCCAAGTGCTCAGTTTTGACCCGACAATTATACCTCCTTTTCCCCAGCAGGCTCTTGGGCCCAGTTTTACGAGGATAACTTTTCCAGCTAAAGACTGTGCGTTATTTCTGTTTATATTTGTGGATCATGCTATTGTTGCTTAGAATGTTTTGGGGAACCATGCTTGCATGTTTTTGTAATTTCCAGAATGAATGTAAATTCATGAGGTTTTGTTTTGGTATTAGACCATTTTAATTTCTTTTTCTTTCAGTGATCGTCGTTTGGCAGATCATTTTGGAGGAAAGCTTCATCTTGGCTATATGCAAATCCGTGAAAAGCTAGCAGAGCTTCAGGTTAGATAATTTTAATCTTATGCATGTTAACCATTTTTGAAAAGAAAAGAAAAAAAAAAGTTATAAACTATTAGAAGACGTCTACAATCTCTAACCATAGCCATAGTCAATATAATCATTCGAGTTTTTCTAATGTTGAAAATGAATCAATGTATACATATGTTTCATTAGAAAATTGAAAAATATAGTCCCCTTAGAAAGTGATGTTTTTTTGGGTCTGTGTTGTGTCTGTGTCCCGTGTCTCTGTTTATGCTTTTTAGTTGATGACTTCTTGCCTGCCCTCTTTGATCAGCTTTGTTTAAGAGTGAATAGAGAAATGTTTCGATCTGGTCATTTCGTTTTATCTTTCCTTTTCTGGTTGGTGCTAGCATTTGCATCTTCTATTTGAATCTTTTAATTGACAGTTTGTGAGGTGTGAAGTTTGTATGCGTAGATCTTGATTACTCTCGGTGGAATTATCTTTTGATATTCAATTGGGAAAATTGCACACATCATCCCTAAAATTATCTTAAAATTTCAATTATTGAATATGAAATAATTTTATAATTTTTAAATGTTCTTGAAATTGAAATTTTTGGAATTAATTGTAACGCACCTCTATGGTTTGATGTCTTAATTAGTTTAGGAGTGGTTTATGCATTTTTCAATTGGCCACTAATGGATTTTTATTGATTATTATTATTATTATTATTATTTTTTAAAAATTTTAGAAAGAGTAACCAAACTTTGTATAAGAATAAATGAAAGAATATAAAGGGAATAAAAAAGATCAACCTCCAAAATGTGTATAACAAGAGATTTCAAAGACAAAATGAGACCTCAAAGATATTTACTAAAAGCTTTACACACTAATGCTCAATGAATGTTCTGAGAATGTGATTCTAACAACGTATAGTTCAAGGTTACGTTTTGTTTGTGTCATGCTTGTGTATGTGAGATGTTGTGTTTATGAACTGAGGTTTACAACTTGAGATTAATAGCGTTCCTTACTTATGATTTTGATTATTAGTTAAGGATCTCTTATGCCGCTGACATTATGTGATTTTCCTCCATTGGATTACCGTGATGTGTTGTTTCAATTGTATTCTTGTCACTTCTTTGTTAGGAAGAAAGAAACAAAAGCCGCAAGATTGATCGACATGATGATCAACGGTAAATGTTGTTCTTATTCCTAAATTATTATTATTATTTTTTACAGTAATATGTTTTTCAATATCTGAATGCTTTCTTTCAGATCGAAGGAGCGAAGTAGAGAACCTGATAGAGAACCGAGTAGGGATCGTGACCGTGACCGTGCTGATAGTCGTGACCGCGGAAGAGATAATGATCGTAGGAGCAGGGATCGTGATAGATATAACGATCGGGATCGTTATGACCGAGACCGCAACAGGGACCCAGATCGCTCTTATGATTCTAGAAGTCGTCGCCATTCACGCTCACGATCAACAGACCGTGAACGTTCAAGGGACTATGATCGTCACAAGTACTGTTAAATTTCAAATACCACGTTTCTTATTATCAAAAAATCAAATACCATATGGATGTAATGAGTGATTCTTCTTTTTAGTTATGACGGTTTGTTCTTTTTCACTCTTTGTGCAGGCGACGTGACCGGTACTAGTACTAAACAGATCTTACGGTGGGTCCAATGGAAGTGAAGGTACAGGTTTATGTCCTGTGTTTCTTCCTATATTTTGAGTGCAGTTGGCTGTATCTTCTCTAATGATTTTATAATGACCACCACAAGGTTATGTTGACTGTACTTTTGAGAGGTATGGTTGTACTGATTACTGGAATTTTATATGTAGCTGTTAGTGGAGTAGTTTCCTTGCAATCATTTTTTGACATATAGACTAAGGTTGTGGGATACATCAATTTTTCATATGATCATTTTGGAGACTTCATAACAGGATGCAAGAAACTGGTAAGATTTGACATATTATTGTTGACCAACCACCGTTTTATGTATCAAGAACCATAGTTTTTAGGCAGGCCGGATGAACGATCTTTTTCTTTTATGCTCTCCCTTTTCCAATCATGTTTTATCTGCAATTTGTAATATTATAATCTTTTTCTCATTTACTTGAAATTTGAAAAGAAAAGAAAATTTAGACAAAGAATTAAAAACAAATATTGGATAGAAAATGGGTAACTAGACATAAATAAACAAAAAAAATCATTAGCCGGGGCAGTGCAGTTGTGTTAAGTTTTAGTTGAAGTGATGTGCAGTATGCATGGAATTGAAAGATACAGATTGAGTTGCTATAAACGAAACAGGTACTGTCAACATTGGTTGCTGGAAAGTTTAGCCTCTCACAATCTTACTGTAAGTATTCATTTCTAAGTTTTAATTTGGAAAAATAGATGGTCAAAAGATCAAATGATCAAATTTAAGCTTGTGCTTCAGTTGAAAACTAGTAGATTGTTGTTGAGAACCACTTGTGTGGAGTTGTTGAATATTATGTGTTGTATGAAGAATGAATTCTATTTTTATATGGGATCTAATTGTGTTGGTTTGTGCTTGTGAATAAGAAATGTTATTTGTCGTTTCGAGTTAGCTGGTTCGAATCAAATGGAGCAAAAT

mRNA sequence

AGAGAATGTGGAAATCCACCCTGACACCCGAAAAAGATTTGACCCGGAAACTCTAAATCAAATCAAACCCTAATTCTGTATTTGCTTCCGATAGCCTCGCTCCTTGAGCAGAGACACCCTTTGGGGAGAAGGTTTTCCTAGAGAGATCTACGCAGAGACAGCCATGGATGCTTTTAGAAGGCAACTGGACCAGCTAATGGGTGCCAATCGAAATGGCGACGTGCAGGAAGTTAGCCGCAAGTACTACGACCGCGATGTGTGCCGCATGTTCTTAGTTGGGCTTTGTCCTCATGAACTCTTCCAACTCACGAAAATGGATATGGGTCCATGCCCGAAGATCCACTCCTTGCAACTTAGGAAAGAATATGAAGAAGCAAAGACTAAAGGGGTTCATAACTACGACAGAGACTTGGAGGATGTTATAGATCGTCTCATTATTGAGTGTGATAGAAAAATTGCTAGAGCCTTGAAGCGACTTGAGGAGGAAGATGCAAAAGCAGCTATTGCAATTTCTGTCTCTGAAGTCACCCAGATACCTGAGGTTCTTGAGTTATCAAAGCAAATTAAAGAGAAGTTGAAAGAAGCCGACCAATATGATCTTGAGGGCAAGACAGATCTTAAAATTCGAGTTTTGGAGGTTGTAGAAGAGTTGAGGACATTACGAGCTGACAAACAGTCGATGCTTCTTTTAGACGCTTTTAACAAAGATAGGGCATCTTTGCCTCAACCTCTGCCAAACCCACCGCCTCTGGCTCCTTTGCCTGTTGTAGCTCCTGATCCTCGTACACAGGAGATGATAAATGAGAAGTTGAAGAAGGCTGAGGAACTTGGTGAGCAAGGAATGATTGACGAGGCTCAAAAAGCATTGGAGGAAGCTGAAGCACTCAAGAAGCTACCAGCTAGGCAGGAGCCAGTGATGGATTCTTCCAAATATACTGCTGCTGATGTGCGAATTACGGATCAAAAGCTGCGTGTGTGTGACATTTGTGGAGCATTTTTAAGCGTTTATGACAGTGATCGTCGTTTGGCAGATCATTTTGGAGGAAAGCTTCATCTTGGCTATATGCAAATCCGTGAAAAGCTAGCAGAGCTTCAGGAAGAAAGAAACAAAAGCCGCAAGATTGATCGACATGATGATCAACGATCGAAGGAGCGAAGTAGAGAACCTGATAGAGAACCGAGTAGGGATCGTGACCGTGACCGTGCTGATAGTCGTGACCGCGGAAGAGATAATGATCGTAGGAGCAGGGATCGTGATAGATATAACGATCGGGATCGTTATGACCGAGACCGCAACAGGGACCCAGATCGCTCTTATGATTCTAGAAGTCGTCGCCATTCACGCTCACGATCAACAGACCGTGAACGTTCAAGGGACTATGATCGTCACAAGCGACGTGACCGGTACTAGTACTAAACAGATCTTACGGTGGGTCCAATGGAAGTGAAGGTACAGGTTTATGTCCTGTGTTTCTTCCTATATTTTGAGTGCAGTTGGCTGTATCTTCTCTAATGATTTTATAATGACCACCACAAGGTTATGTTGACTGTACTTTTGAGAGGTATGGTTGTACTGATTACTGGAATTTTATATGTAGCTGTTAGTGGAGTAGTTTCCTTGCAATCATTTTTTGACATATAGACTAAGGTTGTGGGATACATCAATTTTTCATATGATCATTTTGGAGACTTCATAACAGGATGCAAGAAACTGGTAAGATTTGACATATTATTGTTGACCAACCACCGTTTTATGTATCAAGAACCATAGTTTTTAGGCAGGCCGGATGAACGATCTTTTTCTTTTATGCTCTCCCTTTTCCAATCATGTTTTATCTGCAATTTGTAATATTATAATCTTTTTCTCATTTACTTGAAATTTGAAAAGAAAAGAAAATTTAGACAAAGAATTAAAAACAAATATTGGATAGAAAATGGGTAACTAGACATAAATAAACAAAAAAAATCATTAGCCGGGGCAGTGCAGTTGTGTTAAGTTTTAGTTGAAGTGATGTGCAGTATGCATGGAATTGAAAGATACAGATTGAGTTGCTATAAACGAAACAGGTACTGTCAACATTGGTTGCTGGAAAGTTTAGCCTCTCACAATCTTACTGTAAGTATTCATTTCTAAGTTTTAATTTGGAAAAATAGATGGTCAAAAGATCAAATGATCAAATTTAAGCTTGTGCTTCAGTTGAAAACTAGTAGATTGTTGTTGAGAACCACTTGTGTGGAGTTGTTGAATATTATGTGTTGTATGAAGAATGAATTCTATTTTTATATGGGATCTAATTGTGTTGGTTTGTGCTTGTGAATAAGAAATGTTATTTGTCGTTTCGAGTTAGCTGGTTCGAATCAAATGGAGCAAAAT

Coding sequence (CDS)

ATGGATGCTTTTAGAAGGCAACTGGACCAGCTAATGGGTGCCAATCGAAATGGCGACGTGCAGGAAGTTAGCCGCAAGTACTACGACCGCGATGTGTGCCGCATGTTCTTAGTTGGGCTTTGTCCTCATGAACTCTTCCAACTCACGAAAATGGATATGGGTCCATGCCCGAAGATCCACTCCTTGCAACTTAGGAAAGAATATGAAGAAGCAAAGACTAAAGGGGTTCATAACTACGACAGAGACTTGGAGGATGTTATAGATCGTCTCATTATTGAGTGTGATAGAAAAATTGCTAGAGCCTTGAAGCGACTTGAGGAGGAAGATGCAAAAGCAGCTATTGCAATTTCTGTCTCTGAAGTCACCCAGATACCTGAGGTTCTTGAGTTATCAAAGCAAATTAAAGAGAAGTTGAAAGAAGCCGACCAATATGATCTTGAGGGCAAGACAGATCTTAAAATTCGAGTTTTGGAGGTTGTAGAAGAGTTGAGGACATTACGAGCTGACAAACAGTCGATGCTTCTTTTAGACGCTTTTAACAAAGATAGGGCATCTTTGCCTCAACCTCTGCCAAACCCACCGCCTCTGGCTCCTTTGCCTGTTGTAGCTCCTGATCCTCGTACACAGGAGATGATAAATGAGAAGTTGAAGAAGGCTGAGGAACTTGGTGAGCAAGGAATGATTGACGAGGCTCAAAAAGCATTGGAGGAAGCTGAAGCACTCAAGAAGCTACCAGCTAGGCAGGAGCCAGTGATGGATTCTTCCAAATATACTGCTGCTGATGTGCGAATTACGGATCAAAAGCTGCGTGTGTGTGACATTTGTGGAGCATTTTTAAGCGTTTATGACAGTGATCGTCGTTTGGCAGATCATTTTGGAGGAAAGCTTCATCTTGGCTATATGCAAATCCGTGAAAAGCTAGCAGAGCTTCAGGAAGAAAGAAACAAAAGCCGCAAGATTGATCGACATGATGATCAACGATCGAAGGAGCGAAGTAGAGAACCTGATAGAGAACCGAGTAGGGATCGTGACCGTGACCGTGCTGATAGTCGTGACCGCGGAAGAGATAATGATCGTAGGAGCAGGGATCGTGATAGATATAACGATCGGGATCGTTATGACCGAGACCGCAACAGGGACCCAGATCGCTCTTATGATTCTAGAAGTCGTCGCCATTCACGCTCACGATCAACAGACCGTGAACGTTCAAGGGACTATGATCGTCACAAGCGACGTGACCGGTACTAG

Protein sequence

MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIHSLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSEVTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFNKDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEALKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRRSRDRDRYNDRDRYDRDRNRDPDRSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY

Homology

[Close]

BLAST of CmaCh01G004840 vs. Swiss-Prot
Match: LUC7L_HUMAN (Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.7e-22
Identity = 94/211 (44.55%), Postives = 126/211 (59.72%), Query Frame = 1


Query: 210 EMINEKLKKAEELGEQGMIDEAQKALEEAEALKKLPARQEPVMDSSKYTAADVRITDQKL 269
           E I + L KAE+LG +G +DE+QK L E E   K+ A+++   +  + +        QKL
Sbjct: 131 EEIGKLLAKAEQLGAEGNVDESQKILMEVE---KVRAKKKEAEEEYRNSMPASSFQQQKL 190

Query: 270 RVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKL-------AELQEERNKSRKIDR 329
           RVC++C A+L ++D+DRRLADHFGGKLHLG++QIREKL       AE QE+RN+ R   R
Sbjct: 191 RVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRR 250

Query: 330 HDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRRSRDRDRYNDRDRYDRDRNRDPD 389
            + +R +  SR   R  SR RDR R+ SRDR     RR R R    +R +  R R+RD  
Sbjct: 251 EEREREERLSR---RSGSRTRDRRRSRSRDR-----RRRRSRSTSRERRKLSRSRSRDRH 310

Query: 390 RSYDSRSRRHSRS-RSTDRERSRDYDRHKRR 413
           R + SRSR HSR  R   R+RS  Y   + R
Sbjct: 311 RRHRSRSRSHSRGHRRASRDRSAKYKFSRER 330

[Close]

BLAST of CmaCh01G004840 vs. Swiss-Prot
Match: LUC7L_MOUSE (Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l PE=1 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 6.3e-22
Identity = 93/211 (44.08%), Postives = 126/211 (59.72%), Query Frame = 1


Query: 210 EMINEKLKKAEELGEQGMIDEAQKALEEAEALKKLPARQEPVMDSSKYTAADVRITDQKL 269
           E I + L KAE+LG +G +DE+QK L E E   K+ A+++   +  + +        QKL
Sbjct: 131 EEIGKLLAKAEQLGAEGNVDESQKILMEVE---KVRAKKKEAEEEYRNSMPASSFQQQKL 190

Query: 270 RVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKL-------AELQEERNKSRKIDR 329
           RVC++C A+L ++D+DRRLADHFGGKLHLG++QIREKL       AE QE+RN+ R   R
Sbjct: 191 RVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRR 250

Query: 330 HDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRRSRDRDRYNDRDRYDRDRNRDPD 389
            + +R +   R   R  SR RDR R+ SRDR     RR R R    +R ++ R R+RD  
Sbjct: 251 EEREREERLGR---RSGSRTRDRRRSRSRDR-----RRRRSRSTSRERRKFSRSRSRDRY 310

Query: 390 RSYDSRSRRHSRS-RSTDRERSRDYDRHKRR 413
           R + SRSR HSR  R   R+RS  Y   + R
Sbjct: 311 RRHRSRSRSHSRGHRRASRDRSTKYKFSRER 330

[Close]

BLAST of CmaCh01G004840 vs. Swiss-Prot
Match: LC7L2_MOUSE (Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-19
Identity = 89/214 (41.59%), Postives = 127/214 (59.35%), Query Frame = 1


Query: 210 EMINEKLKKAEELGEQGMIDEAQKALEEAEALKKLPARQEPVMDSSKYTAADVRITDQKL 269
           E I + L K E+LG +G ++E+QK ++E E  +      E V  +S   ++      QKL
Sbjct: 131 EEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASS---FQQQKL 190

Query: 270 RVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAEL-------QEERNK---SRK 329
           RVC++C A+L ++D+DRRLADHFGGKLHLG+++IREKL EL       QE+RN+    R+
Sbjct: 191 RVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRR 250

Query: 330 IDRHDDQRSK-ERSREPDREPSRDRDRDRADSRDRGRDNDRRSRDRDRYNDRDRYDRDRN 389
            +R  ++R K  RSR   + P R R R+    R R    +R+ R R +   R++  R R+
Sbjct: 251 EEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSK--SREKRHRHRS 310

Query: 390 RDPDRSYDSRSRRHSRSRSTDRERSRDYDRHKRR 413
           R   R   SRSR H RSR + R+RSR  +R KRR
Sbjct: 311 RSSSR---SRSRSHQRSRHSSRDRSR--ERSKRR 334

[Close]

BLAST of CmaCh01G004840 vs. Swiss-Prot
Match: LC7L2_HUMAN (Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-19
Identity = 89/214 (41.59%), Postives = 127/214 (59.35%), Query Frame = 1


Query: 210 EMINEKLKKAEELGEQGMIDEAQKALEEAEALKKLPARQEPVMDSSKYTAADVRITDQKL 269
           E I + L K E+LG +G ++E+QK ++E E  +      E V  +S   ++      QKL
Sbjct: 131 EEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKKREAEEVYRNSMPASS---FQQQKL 190

Query: 270 RVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAEL-------QEERNK---SRK 329
           RVC++C A+L ++D+DRRLADHFGGKLHLG+++IREKL EL       QE+RN+    R+
Sbjct: 191 RVCEVCSAYLGLHDNDRRLADHFGGKLHLGFIEIREKLEELKRVVAEKQEKRNQERLKRR 250

Query: 330 IDRHDDQRSK-ERSREPDREPSRDRDRDRADSRDRGRDNDRRSRDRDRYNDRDRYDRDRN 389
            +R  ++R K  RSR   + P R R R+    R R    +R+ R R +   R++  R R+
Sbjct: 251 EEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSK--SREKRHRHRS 310

Query: 390 RDPDRSYDSRSRRHSRSRSTDRERSRDYDRHKRR 413
           R   R   SRSR H RSR + R+RSR  +R KRR
Sbjct: 311 RSSSR---SRSRSHQRSRHSSRDRSR--ERSKRR 334

[Close]

BLAST of CmaCh01G004840 vs. Swiss-Prot
Match: LUC7_SCHPO (U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=usp106 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.9e-17
Identity = 51/140 (36.43%), Postives = 79/140 (56.43%), Query Frame = 1


Query: 5   RRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIHSLQL 64
           R+ ++QLMG+N +         + DR VCR FL G+CPH++F  TKMD+GPCPKIHS +L
Sbjct: 6   RKIIEQLMGSNLSNFTSRGLVHFTDRKVCRSFLCGICPHDIFTNTKMDLGPCPKIHSDKL 65

Query: 65  RKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKI----ARALKRLEEEDAKAAIAISVSE 124
           + +YE A     + Y+ D  + ++R + +C+++I    AR  K  EEE+    +   +  
Sbjct: 66  KSDYERASYSHDYGYEWDYLEDLERHVDDCNKRIDIAEARREKTKEEEERIDELMRDIIH 125

Query: 125 VTQIPEVL--ELSKQIKEKL 139
                EV+  E+    K KL
Sbjct: 126 TDHSIEVIITEMEALAKRKL 145

[Close]

BLAST of CmaCh01G004840 vs. TrEMBL
Match: D7SPM7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00800 PE=4 SV=1)

HSP 1 Score: 664.1 bits (1712), Expect = 1.1e-187
Identity = 370/423 (87.47%), Postives = 396/423 (93.62%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDV+EV+RKYYDRDVCR+FLVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLFLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KGVHNYDRDLEDVIDRLI+ECDRKIARALKRLE+EDAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PEVLELSKQIKEKLKEADQ+DLEGKTD KIR LEVVEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQTPEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPV+APDPRTQEMINEKLKKAE+LGEQGMIDEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVLAPDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKL  RQEPV+DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHD-DQRSKERSREPDREPSRDRDRDRADSRDRGRDNDR 360
           MQIREKLAELQEERNKSRK+DRH+ D+RSKERSR+ DRE S    +DRADSR+RGRD+DR
Sbjct: 301 MQIREKLAELQEERNKSRKVDRHENDRRSKERSRDHDREAS----KDRADSRERGRDHDR 360

Query: 361 RSRDRDRYNDRDR-YDRDRNRDPD--RSYDSRSRRHSRSRSTDR----ERSRDYDRHKRR 416
           RSRDRDRY+DRDR +DR+R+RD D  R+YDSRSRR SRSRS +R    +RSRDYDRH+R 
Sbjct: 361 RSRDRDRYHDRDRGHDRERDRDSDRPRNYDSRSRRRSRSRSGERSRDYDRSRDYDRHRRY 419

[Close]

BLAST of CmaCh01G004840 vs. TrEMBL
Match: A0A0S3RSB9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G066800 PE=4 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 3.3e-187
Identity = 368/418 (88.04%), Postives = 392/418 (93.78%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDV+EV+RKYYDRDVCR++LVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KG  NYDR+LEDVID+LI ECDRKI RALKRLE+EDAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDEDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PEVLELSKQIKEKLKEADQYDLEGKTDLKIR LEVVEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQTPEVLELSKQIKEKLKEADQYDLEGKTDLKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLP PLPNPPPLAPLPVVAPDPRTQEMINEKLKKAE+LGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRASLPTPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKLPARQEPV+DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           MQIREKLAELQEERNKSRK DRH+D+RSKERSR+ DRE S  RDR+R DSR+RGRD+DRR
Sbjct: 301 MQIREKLAELQEERNKSRKTDRHEDRRSKERSRDRDRESS--RDRERGDSRERGRDHDRR 360

Query: 361 SRDRDRYNDRDR-YDRDRNRDPD--RSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDR+ DRDR ++RDR+RD D  RSY+SRSRR SRSRS  RERSRDYDRH+R DRY
Sbjct: 361 SRDRDRHYDRDRGHERDRDRDSDRTRSYESRSRRRSRSRS--RERSRDYDRHRRHDRY 414

[Close]

BLAST of CmaCh01G004840 vs. TrEMBL
Match: A5C9T9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000356 PE=4 SV=1)

HSP 1 Score: 659.8 bits (1701), Expect = 2.1e-186
Identity = 368/423 (87.00%), Postives = 395/423 (93.38%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDV+EV+RKYYDRDVCR+FLVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLFLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KGVHNYDRDLEDVIDRLI+ECDRKIARALKRLE+EDAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ  EVLELSKQIKEKLKEADQ+DLEGKTD KIR LEVVEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQTAEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPV++PDPRTQEMINEKLKKAE+LGEQGMIDEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVLSPDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKL  RQEPV+DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHD-DQRSKERSREPDREPSRDRDRDRADSRDRGRDNDR 360
           MQIREKLAELQEERNKSRK+DRH+ D+RSKERSR+ DRE S    +DRADSR+RGRD+DR
Sbjct: 301 MQIREKLAELQEERNKSRKVDRHENDRRSKERSRDRDREAS----KDRADSRERGRDHDR 360

Query: 361 RSRDRDRYNDRDR-YDRDRNRDPD--RSYDSRSRRHSRSRSTDR----ERSRDYDRHKRR 416
           RSRDRDRY+DRDR +DR+R+RD D  R+YDSRSRR SRSRS +R    +RSRDYDRH+R 
Sbjct: 361 RSRDRDRYHDRDRGHDRERDRDSDRPRNYDSRSRRRSRSRSGERSRDYDRSRDYDRHRRY 419

[Close]

BLAST of CmaCh01G004840 vs. TrEMBL
Match: A0A059D1I0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01428 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 2.8e-186
Identity = 364/418 (87.08%), Postives = 394/418 (94.26%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDV+EV+RKYYDRDVCRM+LVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRMYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KGV NYDRDLEDVIDRLI+ECDRKIARALKRLEE+DAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKGKGVDNYDRDLEDVIDRLIVECDRKIARALKRLEEDDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PE+LELSKQIKEKLKEADQ+DLEGKTDLKIR LE+VEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQTPEILELSKQIKEKLKEADQHDLEGKTDLKIRALEIVEELRTKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAE+LGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKL ARQEP  DS+KYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLHARQEPAQDSTKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           MQIR+KLAELQEERNK RK+D H+D+RSKERS++ DRE S  +D++RADSRDRGRD DRR
Sbjct: 301 MQIRDKLAELQEERNKIRKVDHHEDRRSKERSKDRDRESS--KDQERADSRDRGRDYDRR 360

Query: 361 SRDRDRYNDRDR-YDRDRNRDPD--RSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDR+++RDR Y+R+R+RD D  RSYDSRSRR SRSRS  +ERSRDYDRH+RRDRY
Sbjct: 361 SRDRDRHHERDRGYERERDRDIDRPRSYDSRSRRRSRSRS--QERSRDYDRHRRRDRY 414

[Close]

BLAST of CmaCh01G004840 vs. TrEMBL
Match: M5WNZ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006377mg PE=4 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 4.8e-186
Identity = 363/418 (86.84%), Postives = 391/418 (93.54%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLDQLMGANRNGDV+EV+RKYYDR+VCR++LVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDALRKQLDQLMGANRNGDVREVNRKYYDREVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KG  +YDRDLEDVIDRLI+ECDRKIARALKRLE++DAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKAKGTDDYDRDLEDVIDRLIVECDRKIARALKRLEDDDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PEVLELSKQIKEKLKE DQ+DLEGKTDLKIR +E+V+ELR  RADKQSMLLLDAFN
Sbjct: 121 VTQTPEVLELSKQIKEKLKEVDQFDLEGKTDLKIRAMEIVDELRGKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPVV PD RTQEMINEKLKKAE+LGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVVVPDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKLPARQEP++DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLPARQEPILDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           MQIREKLAELQEERNK RK+DR +D+RSKERS+E DRE S  RDR+R DSRDRGRD+DRR
Sbjct: 301 MQIREKLAELQEERNKIRKVDRSEDRRSKERSKERDRESS--RDRERGDSRDRGRDHDRR 360

Query: 361 SRDRDRYNDRDR-YDRDRNRDPDRS--YDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDRY DRDR YDR+R+RD DRS  YDSRSRR SRSRS  RERSRDYDRH+R DRY
Sbjct: 361 SRDRDRYYDRDRGYDRERDRDSDRSRNYDSRSRRRSRSRS--RERSRDYDRHRRYDRY 414

[Close]

BLAST of CmaCh01G004840 vs. TAIR10
Match: AT5G17440.1 (AT5G17440.1 LUC7 related protein)

HSP 1 Score: 562.4 bits (1448), Expect = 2.4e-160
Identity = 323/415 (77.83%), Postives = 361/415 (86.99%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDV EV+RKYYDRDVCR++L GLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDAMRKQLDVLMGANRNGDVTEVNRKYYDRDVCRLYLSGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEY++AK KGV NYDR+LED IDRLI+ECDRKI RAL RL+EEDAKAAIAISV+E
Sbjct: 61  SLQLRKEYKDAKAKGVDNYDRELEDAIDRLIVECDRKIGRALNRLQEEDAKAAIAISVTE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
            TQ PE+LELSKQIKEK+KEAD +DLEGKTDLKIR LE+VEE+RT RAD Q++LLLDAFN
Sbjct: 121 FTQSPEILELSKQIKEKMKEADLHDLEGKTDLKIRALELVEEMRTKRADLQAVLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDR SL Q +P   P A LP   PDPRTQEMINEKLKKAEELGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRTSLQQAVPAQQPAATLP--PPDPRTQEMINEKLKKAEELGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKL ARQEPV+DS+KYTAADVRITDQKLR+CDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLTARQEPVVDSTKYTAADVRITDQKLRLCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           M IR+KLAELQEE+NK  K +R +++RSKERSRE  RE S  +DRD  D+RDRGRD DRR
Sbjct: 301 MLIRDKLAELQEEKNKVHK-ERVEERRSKERSRE--RESS--KDRDGGDNRDRGRDVDRR 360

Query: 361 SRDRDRYNDRDRYDRDRNRDPDRSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDR++D   +DR+ N+   R YDSRSRR SRSRS  RER RD+DR +R DRY
Sbjct: 361 SRDRDRHHDHREHDRNYNQ--SRGYDSRSRRSSRSRS--RERPRDHDRRRRHDRY 404

[Close]

BLAST of CmaCh01G004840 vs. TAIR10
Match: AT3G03340.1 (AT3G03340.1 LUC7 related protein)

HSP 1 Score: 549.7 bits (1415), Expect = 1.6e-156
Identity = 309/415 (74.46%), Postives = 360/415 (86.75%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDVQEV+RKYYDRDVCR++L GLCPH+LFQLTKMDMGPCPK+H
Sbjct: 1   MDAIRKQLDVLMGANRNGDVQEVNRKYYDRDVCRLYLSGLCPHDLFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEY EA+ KGV NYDR+LED IDRLI+ECDRKI RALKRL+EEDAKAAIAISVSE
Sbjct: 61  SLQLRKEYREARAKGVDNYDRELEDAIDRLIVECDRKIGRALKRLQEEDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PE+LELS++IKEK+KEAD +DLEGK DLKIR LE+VEE+RT RAD+Q++LLL+AFN
Sbjct: 121 VTQSPEILELSEKIKEKMKEADIHDLEGKMDLKIRALELVEEMRTKRADQQAVLLLEAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQP+P  PP + LP   PDPRTQEMINEKLKKAE+LGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRASLPQPVPAQPPSSELP--PPDPRTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKL  R+EP  DS+KYTA DVRITDQKLR+CDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLTVRREPPADSTKYTAVDVRITDQKLRLCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           M +R+KL EL +E+   RK      +RSKER+ + +RE S+DR++++  SR+  RD DRR
Sbjct: 301 MLVRDKLTELLDEKANIRK------ERSKERNSK-ERESSKDREKEQETSREHRRDYDRR 360

Query: 361 SRDRDRYNDRDRYDRDRNRDPDRSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDR++DR   DR+++RD DRS+ SRSRR SRSRS  R+R RDYDRH+R +RY
Sbjct: 361 SRDRDRHHDR---DREQDRDYDRSH-SRSRRRSRSRSRSRDRPRDYDRHRRHNRY 402

[Close]

BLAST of CmaCh01G004840 vs. TAIR10
Match: AT5G51410.1 (AT5G51410.1 LUC7 N_terminus domain-containing protein)

HSP 1 Score: 83.2 bits (204), Expect = 4.2e-16
Identity = 56/169 (33.14%), Postives = 90/169 (53.25%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQE----VSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPC 60
           MDA R  LD+LMGA RN   +E       K+ DR+VC  ++V  CPH+LF  TK D+G C
Sbjct: 1   MDAQRALLDELMGAARNLTDEERRGFKEVKWDDREVCAFYMVRFCPHDLFVNTKSDLGAC 60

Query: 61  PKIHSLQLRKEYEEAKTKG--VHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAI 120
            +IH  +L++ +E +      V  ++ +L    ++L+ + DRK+ R  +RL +E      
Sbjct: 61  SRIHDPKLKESFENSPRHDSYVPKFEAELAQFCEKLVNDLDRKVRRGRERLAQEVEPVPP 120

Query: 121 AISVSEVTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEEL 164
               +E  +   VLE  +++K  L++ +    EGK D    ++  VE L
Sbjct: 121 PSLSAEKAEQLSVLE--EKVKNLLEQVEALGEEGKVDEAEALMRKVEGL 167

[Close]

BLAST of CmaCh01G004840 vs. NCBI nr
Match: gi|659082216|ref|XP_008441724.1| (PREDICTED: putative RNA-binding protein Luc7-like 2 isoform X1 [Cucumis melo])

HSP 1 Score: 739.2 bits (1907), Expect = 4.0e-210
Identity = 400/415 (96.39%), Postives = 408/415 (98.31%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH
Sbjct: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEE K KG+HNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEGKAKGIHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQIPEVLELSK+IKEKLKEADQYDLEGKTDLKIRVLEVVEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQIPEVLELSKEIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTRRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKLPARQEPV+DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLPARQEPVVDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           MQIREKLAELQEERNKSRK+DRHDD+RSKERSREPDREPS  RDRDR DSRDRGRDNDRR
Sbjct: 301 MQIREKLAELQEERNKSRKVDRHDDRRSKERSREPDREPS--RDRDRGDSRDRGRDNDRR 360

Query: 361 SRDRDRYNDRDRYDRDRNRDPDRSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDRY+DRDRYDR+RNRDPDRSYDSRSRR SRSRSTDRER+RDYDRHKRRDRY
Sbjct: 361 SRDRDRYHDRDRYDRERNRDPDRSYDSRSRRRSRSRSTDRERARDYDRHKRRDRY 413

[Close]

BLAST of CmaCh01G004840 vs. NCBI nr
Match: gi|1009118308|ref|XP_015875789.1| (PREDICTED: putative RNA-binding protein Luc7-like 2 [Ziziphus jujuba])

HSP 1 Score: 664.5 bits (1713), Expect = 1.2e-187
Identity = 370/419 (88.31%), Postives = 395/419 (94.27%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLDQLMGANRNGDV+EV+RKYYDRDVCR++LVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDALRKQLDQLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KG  NYDRDLEDVIDRLI+ECDRKIARALKRLE++DAKAAIAISVS+
Sbjct: 61  SLQLRKEYEEAKAKGTDNYDRDLEDVIDRLIVECDRKIARALKRLEDDDAKAAIAISVSK 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PEVLELSKQIKEKLKEADQ+DLEGKTDLKIR LEVVEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQTPEVLELSKQIKEKLKEADQHDLEGKTDLKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPVVAPD RTQEMINEKLKKAE+LGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVVAPDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKLPARQEPV+DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKER-SREPDREPSRDRDRDRADSRDRGRDNDR 360
           MQIREKLAELQEERNKSRK+DR+D++RSKER SR+ +REPS  +DRDR +SRDR RD DR
Sbjct: 301 MQIREKLAELQEERNKSRKVDRYDERRSKERKSRDREREPS--KDRDRGESRDRARDYDR 360

Query: 361 RSRDRDRYNDRDR-YDRDRNRDPD--RSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           RSRDRDRY DRDR YDR+R+RD D  RSYDSRSRR SRSRS  RERSRDYDRH+R DRY
Sbjct: 361 RSRDRDRYYDRDRGYDRERDRDSDHSRSYDSRSRRRSRSRS--RERSRDYDRHRRYDRY 415

[Close]

BLAST of CmaCh01G004840 vs. NCBI nr
Match: gi|225430908|ref|XP_002276691.1| (PREDICTED: putative RNA-binding protein Luc7-like 2 [Vitis vinifera])

HSP 1 Score: 664.1 bits (1712), Expect = 1.6e-187
Identity = 370/423 (87.47%), Postives = 396/423 (93.62%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDV+EV+RKYYDRDVCR+FLVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLFLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KGVHNYDRDLEDVIDRLI+ECDRKIARALKRLE+EDAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKAKGVHNYDRDLEDVIDRLIVECDRKIARALKRLEDEDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PEVLELSKQIKEKLKEADQ+DLEGKTD KIR LEVVEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQTPEVLELSKQIKEKLKEADQFDLEGKTDSKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPV+APDPRTQEMINEKLKKAE+LGEQGMIDEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVLAPDPRTQEMINEKLKKAEDLGEQGMIDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKL  RQEPV+DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLAPRQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHD-DQRSKERSREPDREPSRDRDRDRADSRDRGRDNDR 360
           MQIREKLAELQEERNKSRK+DRH+ D+RSKERSR+ DRE S    +DRADSR+RGRD+DR
Sbjct: 301 MQIREKLAELQEERNKSRKVDRHENDRRSKERSRDHDREAS----KDRADSRERGRDHDR 360

Query: 361 RSRDRDRYNDRDR-YDRDRNRDPD--RSYDSRSRRHSRSRSTDR----ERSRDYDRHKRR 416
           RSRDRDRY+DRDR +DR+R+RD D  R+YDSRSRR SRSRS +R    +RSRDYDRH+R 
Sbjct: 361 RSRDRDRYHDRDRGHDRERDRDSDRPRNYDSRSRRRSRSRSGERSRDYDRSRDYDRHRRY 419

[Close]

BLAST of CmaCh01G004840 vs. NCBI nr
Match: gi|951063096|ref|XP_014523201.1| (PREDICTED: putative RNA-binding protein Luc7-like 2 [Vigna radiata var. radiata])

HSP 1 Score: 662.5 bits (1708), Expect = 4.7e-187
Identity = 368/418 (88.04%), Postives = 392/418 (93.78%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLD LMGANRNGDV+EV+RKYYDRDVCR++LVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KG  NYDR+LEDVID+LI ECDRKI RALKRLE+EDAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKAKGTDNYDRELEDVIDKLIGECDRKIGRALKRLEDEDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PEVLELSKQIKEKLKEADQYDLEGKTDLKIR LEVVEELRT RADKQSMLLLDAFN
Sbjct: 121 VTQTPEVLELSKQIKEKLKEADQYDLEGKTDLKIRALEVVEELRTKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLP PLPNPPPLAPLPVVAPDPRTQEMINEKLKKAE+LGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRASLPTPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKLPARQEPV+DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLPARQEPVLDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           MQIREKLAELQEERNKSRK DRH+D+RSKERSR+ DRE S  RDR+R DSR+RGRD+DRR
Sbjct: 301 MQIREKLAELQEERNKSRKTDRHEDRRSKERSRDRDRESS--RDRERGDSRERGRDHDRR 360

Query: 361 SRDRDRYNDRDR-YDRDRNRDPD--RSYDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDR+ DRDR ++RDR+RD D  RSY+SRSRR SRSRS  RERSRDYDRH+R DRY
Sbjct: 361 SRDRDRHYDRDRGHERDRDRDSDRTRSYESRSRRRSRSRS--RERSRDYDRHRRHDRY 414

[Close]

BLAST of CmaCh01G004840 vs. NCBI nr
Match: gi|645223099|ref|XP_008218468.1| (PREDICTED: putative RNA-binding protein Luc7-like 2 [Prunus mume])

HSP 1 Score: 660.2 bits (1702), Expect = 2.3e-186
Identity = 364/418 (87.08%), Postives = 391/418 (93.54%), Query Frame = 1


Query: 1   MDAFRRQLDQLMGANRNGDVQEVSRKYYDRDVCRMFLVGLCPHELFQLTKMDMGPCPKIH 60
           MDA R+QLDQLMGANRNGDV+EV+RKYYDR+VCR++LVGLCPHELFQLTKMDMGPCPK+H
Sbjct: 1   MDALRKQLDQLMGANRNGDVREVNRKYYDREVCRLYLVGLCPHELFQLTKMDMGPCPKVH 60

Query: 61  SLQLRKEYEEAKTKGVHNYDRDLEDVIDRLIIECDRKIARALKRLEEEDAKAAIAISVSE 120
           SLQLRKEYEEAK KG  NYDRDLEDVIDRLI+ECDRKIARALKRLE++DAKAAIAISVSE
Sbjct: 61  SLQLRKEYEEAKAKGTDNYDRDLEDVIDRLIVECDRKIARALKRLEDDDAKAAIAISVSE 120

Query: 121 VTQIPEVLELSKQIKEKLKEADQYDLEGKTDLKIRVLEVVEELRTLRADKQSMLLLDAFN 180
           VTQ PEVLELSKQIKEKLKE DQ+DLEGKTDLKIR +E+V+ELR  RADKQSMLLLDAFN
Sbjct: 121 VTQTPEVLELSKQIKEKLKEVDQFDLEGKTDLKIRAMEIVDELRGKRADKQSMLLLDAFN 180

Query: 181 KDRASLPQPLPNPPPLAPLPVVAPDPRTQEMINEKLKKAEELGEQGMIDEAQKALEEAEA 240
           KDRASLPQPLPNPPPLAPLPVV PD RTQEMINEKLKKAE+LGEQGM+DEAQKALEEAEA
Sbjct: 181 KDRASLPQPLPNPPPLAPLPVVVPDARTQEMINEKLKKAEDLGEQGMVDEAQKALEEAEA 240

Query: 241 LKKLPARQEPVMDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300
           LKKLPARQEP++DSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY
Sbjct: 241 LKKLPARQEPILDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGY 300

Query: 301 MQIREKLAELQEERNKSRKIDRHDDQRSKERSREPDREPSRDRDRDRADSRDRGRDNDRR 360
           MQIREKLAELQEERNK RK+DR +D+RSKERS+E DRE S  RDR+R DSRDRGRD+DRR
Sbjct: 301 MQIREKLAELQEERNKIRKVDRAEDRRSKERSKERDRESS--RDRERGDSRDRGRDHDRR 360

Query: 361 SRDRDRYNDRDR-YDRDRNRDPDRS--YDSRSRRHSRSRSTDRERSRDYDRHKRRDRY 416
           SRDRDRY DRDR YDR+R+RD DRS  YDSRSRR SRSRS  RERSRDYDRH+R DRY
Sbjct: 361 SRDRDRYYDRDRGYDRERDRDSDRSRNYDSRSRRRSRSRS--RERSRDYDRHRRYDRY 414

The following BLAST results are available for this feature:

BLAST of CmaCh01G004840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LUC7L_HUMAN	3.7e-22	44.55	Putative RNA-binding protein Luc7-like 1 OS=Homo sapiens GN=LUC7L PE=1 SV=1	[more]
LUC7L_MOUSE	6.3e-22	44.08	Putative RNA-binding protein Luc7-like 1 OS=Mus musculus GN=Luc7l PE=1 SV=2	[more]
LC7L2_MOUSE	1.7e-19	41.59	Putative RNA-binding protein Luc7-like 2 OS=Mus musculus GN=Luc7l2 PE=1 SV=1	[more]
LC7L2_HUMAN	1.7e-19	41.59	Putative RNA-binding protein Luc7-like 2 OS=Homo sapiens GN=LUC7L2 PE=1 SV=2	[more]
LUC7_SCHPO	7.9e-17	36.43	U1 snRNP-associated protein usp106 OS=Schizosaccharomyces pombe (strain 972 / AT...	[more]

BLAST of CmaCh01G004840 vs. TrEMBL


Match Name	E-value	Identity	Description
D7SPM7_VITVI	1.1e-187	87.47	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g00800 PE=4 SV=...	[more]
A0A0S3RSB9_PHAAN	3.3e-187	88.04	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G066800 PE=...	[more]
A5C9T9_VITVI	2.1e-186	87.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000356 PE=4 SV=1	[more]
A0A059D1I0_EUCGR	2.8e-186	87.08	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01428 PE=4 SV=1	[more]
M5WNZ1_PRUPE	4.8e-186	86.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006377mg PE=4 SV=1	[more]

BLAST of CmaCh01G004840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17440.1	2.4e-160	77.83	LUC7 related protein	[more]
AT3G03340.1	1.6e-156	74.46	LUC7 related protein	[more]
AT5G51410.1	4.2e-16	33.14	LUC7 N_terminus domain-containing protein	[more]

BLAST of CmaCh01G004840 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082216\|ref\|XP_008441724.1\|	4.0e-210	96.39	PREDICTED: putative RNA-binding protein Luc7-like 2 isoform X1 [Cucumis melo]	[more]
gi\|1009118308\|ref\|XP_015875789.1\|	1.2e-187	88.31	PREDICTED: putative RNA-binding protein Luc7-like 2 [Ziziphus jujuba]	[more]
gi\|225430908\|ref\|XP_002276691.1\|	1.6e-187	87.47	PREDICTED: putative RNA-binding protein Luc7-like 2 [Vitis vinifera]	[more]
gi\|951063096\|ref\|XP_014523201.1\|	4.7e-187	88.04	PREDICTED: putative RNA-binding protein Luc7-like 2 [Vigna radiata var. radiata]	[more]
gi\|645223099\|ref\|XP_008218468.1\|	2.3e-186	87.08	PREDICTED: putative RNA-binding protein Luc7-like 2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004882	Luc7-rel

Vocabulary: **Molecular Function**
Term	Definition
GO:0003729	mRNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005685	U1 snRNP

Vocabulary: **Biological Process**
Term	Definition
GO:0006376	mRNA splice site selection

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006376	mRNA splice site selection
cellular_component	GO:0005685	U1 snRNP
cellular_component	GO:0071004	U2-type prespliceosome
molecular_function	GO:0003729	mRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G004840.1	CmaCh01G004840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004882	Luc7-related	PANTHER	PTHR12375	RNA-BINDING PROTEIN LUC7-RELATED	coord: 1..144 score: 4.1E-197coord: 212..415 score: 4.1E
IPR004882	Luc7-related	PFAM	PF03194	LUC7	coord: 2..171 score: 2.7E-40coord: 209..326 score: 1.2
None	No IPR available	unknown	Coil	Coil	coord: 127..147 score: -coord: 300..320 scor
None	No IPR available	PANTHER	PTHR12375:SF32	SUBFAMILY NOT NAMED	coord: 1..144 score: 4.1E-197coord: 212..415 score: 4.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G004840	Cucsa.189450	Cucumber (Gy14) v1	cgycmaB0552
CmaCh01G004840	Cla004141	Watermelon (97103) v1	cmawmB461
CmaCh01G004840	Csa2G099460	Cucumber (Chinese Long) v2	cmacuB441
CmaCh01G004840	MELO3C008563	Melon (DHL92) v3.5.1	cmameB430
CmaCh01G004840	CSPI02G08150	Wild cucumber (PI 183967)	cmacpiB444
CmaCh01G004840	CmoCh05G008570	Cucurbita moschata (Rifu)	cmacmoB485
CmaCh01G004840	CmoCh01G005200	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G004840	Lsi11G009620	Bottle gourd (USVL1VR-Ls)	cmalsiB404
CmaCh01G004840	Cp4.1LG11g07140	Cucurbita pepo (Zucchini)	cmacpeB462
CmaCh01G004840	Cp4.1LG02g12420	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G004840	MELO3C008563.2	Melon (DHL92) v3.6.1	cmamedB494
CmaCh01G004840	CsaV3_2G010530	Cucumber (Chinese Long) v3	cmacucB0532
CmaCh01G004840	Cla97C11G216120	Watermelon (97103) v2	cmawmbB451
CmaCh01G004840	Bhi06G000788	Wax gourd	cmawgoB0555
CmaCh01G004840	CsGy2G008410	Cucumber (Gy14) v2	cgybcmaB205
CmaCh01G004840	Carg20431	Silver-seed gourd	carcmaB0982

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G004840	CmaCh05G008710	Cucurbita maxima (Rimu)	cmacmaB428

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G004840	Watermelon (97103) v2	cmawmbB456
CmaCh01G004840	Watermelon (Charleston Gray)	cmawcgB395
CmaCh01G004840	Watermelon (97103) v1	cmawmB464