CmaCh01G004120 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAAGTTCCCTGATGATTCGCAGAATCCGGATAATAAACTACCTGAAAAGGGTGTTCTGAGTTGTGCCCAAGATTTGAGTAAAATGTCATCCTCTAGACATTTTGGTCAAAGTAATGCTGAAGTAGTAGCTGGTAGTTTCCAACAGCGTGCGCTTGGTATCGTCCATGAAGAAGCTAATGGCTTGTTGATTTTCAAACCTCCACTTTCACGACCACCACGTTATCAGATGAGAAAAAAGCTTCTCATTCTTGATATTAATGGTGTGCTTGTTGATATTGTATCTCCTCCTCCCAAGGACCGGAAAGCAGACATTAATATTGCTCGACGTGCCGGTGAGAATCGATCAACATTTTATATTAACCAAGTTCAATGCAAATTCTATCTCTATCTTGATTTAATTCTGATTTTGAAAATTTCAGTTTTCAAAAGACCTTCTTATTTAGATTTCATGAAGTTCTGCTTTGAGCGATTTGAAGTTGGCATATGGTCATCAAGAAACGGGTATTGTTGAATTAATTGTGTTTCACATGTTATTAATTTCTTATTGGAACTATATCAAAGAAGTAATTAAGCCTCTTAATGCTTTGAAGGAAGAATGTACAGAGAATGGTTGATTATTTGATAGGAGACCTGAAGCACAAATTATTATTTTGTTGGGTGAGGAATAAAAAAAAACTCACTTAAAAAGTTCGTTTTTGAAATTGTATTCGTACTCTCCATTGGTGCTCTATATAATTCGCATTCAGCACAACGTAACTCTGTATTTTAATATAGTACGAGAGGCATTGCTTTTATGGACTCACTTTTACAGGATCTTTCGCGCTGCACTGCTTCAAGATTTAATACACTCGAAAACAAACACAAACCTCTAGTTTTCAAGCAACTGAGGAGAGTTTGGGAGAAGCAGGATCCGAATCTTCCATGGGAACGGGGAGAATATAACGAGTCCAATACGGTGTTGCTGGACGATTCTCCGTACAAAGCATTGCTTAATTCTGTATGTTCAGTTAACTTTTCCGATCATTAAAGATTATAATCATGGATGGCCTTGATGTTTCGATCACATTTTATCTTCTCTATTCACATTAGTAATGGATGGCCTAATCTTATCATTTGCTAACCGTTGATTCTTGCAGCCACATACGGCAGTTTTCCCACATTCTTACACATATCTGGATGACAAAGATACTTCATTAGGTGAGTTCAAAATTACATTTTGGGTGATGTTTAGTAAACATTGTTTACATTTGTAGAATGTGTTTGGAACGAGTCAGGAATACATCTCCATTGGTACGAGGCCTTTTGGGGCCCAAAGCAAAATCGTAAGAGTTTATGTTTAAAGTGGACAACATCATATCATTGTGGAGATCCGTGATTCCTAACATAAACATGACAATTAATTTGAAAAGTGTTTTTACAAAGCTAAAGTTGTGTTTCCTTTTAAGTTTGAGAATCATGCTGGCTGTGGTGTGTGTGTGTGTGGCAGGAACAGGAGGCGATCTTAGAAATTACCTAGAAGGCTTGGCTGAAGCTGAAAATGTACAGAAGTACGTGGGAGAAAACCCATTTGGTCAAAGGCCTATATCAGAAGGAAGTGCATCTTGGGACTTCTATCACATGGTTTTGGATGATTATCATTCCTTTTCATCAACTATTTGACATCTTTTCTATGAGTAATTTTGAAAGGTGTAAGAAGCACAGCAAGTTGACAAGCAAATTCTTTTGTATTAAATGAATTGACATTCATCTTTTGGGATCAAAAAGAAAGAAAGTTGACATATCCCTGCAAATGCCGTGGCTATCTATTCTTCCATTTGAAAGGACACCCCAAAAGGGGAGGAGGAGCCGCTAGCTATCTATTCTTCCATTTGAAAGGACACCCCAAAAGGGGAGGAGGAGCCGCTAGCTCTCTCTTAGTGGTTGATTGTGGGGGGAGTGGCTAATGATTTGTAGCAATGCACACTGAAATATGAAGGGTTAGGCTTCGATTGTGACAAGATGATTAGGGGCTTCTATGAACATGGCGACTTCCATTTTTCTCCACACAACTAAAAAAAAATGTCTATATATATATAGCTGTCCGAGTCAGGGTTTTAAAACAACTATCTACCAAGTAAGAGATTTTCATGTCAGG ATGTTGAAGTTCCCTGATGATTCGCAGAATCCGGATAATAAACTACCTGAAAAGGGTGTTCTGAGTTGTGCCCAAGATTTGAGTAAAATGTCATCCTCTAGACATTTTGGTCAAAGTAATGCTGAAGTAGTAGCTGGTAGTTTCCAACAGCGTGCGCTTGGTATCGTCCATGAAGAAGCTAATGGCTTGTTGATTTTCAAACCTCCACTTTCACGACCACCACGTTATCAGATGAGAAAAAAGCTTCTCATTCTTGATATTAATGGTGTGCTTGTTGATATTGTATCTCCTCCTCCCAAGGACCGGAAAGCAGACATTAATATTGCTCGACGTGCCGTTTTCAAAAGACCTTCTTATTTAGATTTCATGAAGTTCTGCTTTGAGCGATTTGAAGTTGGCATATGGTCATCAAGAAACGGGAAGAATGTACAGAGAATGGTTGATTATTTGATAGGAGACCTGAAGCACAAATTATTATTTTGTTGGGATCTTTCGCGCTGCACTGCTTCAAGATTTAATACACTCGAAAACAAACACAAACCTCTAGTTTTCAAGCAACTGAGGAGAGTTTGGGAGAAGCAGGATCCGAATCTTCCATGGGAACGGGGAGAATATAACGAGTCCAATACGGTGTTGCTGGACGATTCTCCGTACAAAGCATTGCTTAATTCTCCACATACGGCAGTTTTCCCACATTCTTACACATATCTGGATGACAAAGATACTTCATTAGGAACAGGAGGCGATCTTAGAAATTACCTAGAAGGCTTGGCTGAAGCTGAAAATGTACAGAAGTACGTGGGAGAAAACCCATTTGGTCAAAGGCCTATATCAGAAGGAAGTGCATCTTGGGACTTCTATCACATGGTTTTGGATGATTATCATTCCTTTTCATCAACTATTTGACATCTTTTCTATGAGTAATTTTGAAAGGTGTAAGAAGCACAGCAAGTTGACAAGCAAATTCTTTTGTATTAAATGAATTGACATTCATCTTTTGGGATCAAAAAGAAAGAAAGTTGACATATCCCTGCAAATGCCGTGGCTATCTATTCTTCCATTTGAAAGGACACCCCAAAAGGGGAGGAGGAGCCGCTAGCTATCTATTCTTCCATTTGAAAGGACACCCCAAAAGGGGAGGAGGAGCCGCTAGCTCTCTCTTAGTGGTTGATTGTGGGGGGAGTGGCTAATGATTTGTAGCAATGCACACTGAAATATGAAGGGTTAGGCTTCGATTGTGACAAGATGATTAGGGGCTTCTATGAACATGGCGACTTCCATTTTTCTCCACACAACTAAAAAAAAATGTCTATATATATATAGCTGTCCGAGTCAGGGTTTTAAAACAACTATCTACCAAGTAAGAGATTTTCATGTCAGG ATGTTGAAGTTCCCTGATGATTCGCAGAATCCGGATAATAAACTACCTGAAAAGGGTGTTCTGAGTTGTGCCCAAGATTTGAGTAAAATGTCATCCTCTAGACATTTTGGTCAAAGTAATGCTGAAGTAGTAGCTGGTAGTTTCCAACAGCGTGCGCTTGGTATCGTCCATGAAGAAGCTAATGGCTTGTTGATTTTCAAACCTCCACTTTCACGACCACCACGTTATCAGATGAGAAAAAAGCTTCTCATTCTTGATATTAATGGTGTGCTTGTTGATATTGTATCTCCTCCTCCCAAGGACCGGAAAGCAGACATTAATATTGCTCGACGTGCCGTTTTCAAAAGACCTTCTTATTTAGATTTCATGAAGTTCTGCTTTGAGCGATTTGAAGTTGGCATATGGTCATCAAGAAACGGGAAGAATGTACAGAGAATGGTTGATTATTTGATAGGAGACCTGAAGCACAAATTATTATTTTGTTGGGATCTTTCGCGCTGCACTGCTTCAAGATTTAATACACTCGAAAACAAACACAAACCTCTAGTTTTCAAGCAACTGAGGAGAGTTTGGGAGAAGCAGGATCCGAATCTTCCATGGGAACGGGGAGAATATAACGAGTCCAATACGGTGTTGCTGGACGATTCTCCGTACAAAGCATTGCTTAATTCTCCACATACGGCAGTTTTCCCACATTCTTACACATATCTGGATGACAAAGATACTTCATTAGGAACAGGAGGCGATCTTAGAAATTACCTAGAAGGCTTGGCTGAAGCTGAAAATGTACAGAAGTACGTGGGAGAAAACCCATTTGGTCAAAGGCCTATATCAGAAGGAAGTGCATCTTGGGACTTCTATCACATGGTTTTGGATGATTATCATTCCTTTTCATCAACTATTTGA MLKFPDDSQNPDNKLPEKGVLSCAQDLSKMSSSRHFGQSNAEVVAGSFQQRALGIVHEEANGLLIFKPPLSRPPRYQMRKKLLILDINGVLVDIVSPPPKDRKADINIARRAVFKRPSYLDFMKFCFERFEVGIWSSRNGKNVQRMVDYLIGDLKHKLLFCWDLSRCTASRFNTLENKHKPLVFKQLRRVWEKQDPNLPWERGEYNESNTVLLDDSPYKALLNSPHTAVFPHSYTYLDDKDTSLGTGGDLRNYLEGLAEAENVQKYVGENPFGQRPISEGSASWDFYHMVLDDYHSFSSTI
BLAST of CmaCh01G004120 vs. TrEMBL
Match: A0A0A0KY71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G131130 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 6.0e-138 Identity = 238/302 (78.81%), Postives = 264/302 (87.42%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TrEMBL
Match: M5WU72_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007590mg PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 3.6e-90 Identity = 156/229 (68.12%), Postives = 185/229 (80.79%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TrEMBL
Match: A0A059AE98_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01384 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 3.9e-89 Identity = 154/236 (65.25%), Postives = 191/236 (80.93%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TrEMBL
Match: A0A151U149_CAJCA (Putative FCP1 isogenyy domain-containing protein C1271.03c family OS=Cajanus cajan GN=KK1_005652 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 2.4e-86 Identity = 144/215 (66.98%), Postives = 182/215 (84.65%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TrEMBL
Match: A0A151QMT0_CAJCA (Putative FCP1 isogenyy domain-containing protein C1271.03c family OS=Cajanus cajan GN=KK1_047998 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 2.4e-86 Identity = 144/215 (66.98%), Postives = 182/215 (84.65%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TAIR10
Match: AT3G29760.1 (AT3G29760.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 210.7 bits (535), Expect = 1.3e-54 Identity = 94/152 (61.84%), Postives = 122/152 (80.26%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TAIR10
Match: AT4G26190.1 (AT4G26190.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 209.1 bits (531), Expect = 3.7e-54 Identity = 101/216 (46.76%), Postives = 141/216 (65.28%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TAIR10
Match: AT2G36540.1 (AT2G36540.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 147.9 bits (372), Expect = 1.0e-35 Identity = 89/226 (39.38%), Postives = 125/226 (55.31%), Query Frame = 1
BLAST of CmaCh01G004120 vs. TAIR10
Match: AT2G36550.1 (AT2G36550.1 NLI interacting factor (InterPro:IPR004274)) HSP 1 Score: 106.3 bits (264), Expect = 3.3e-23 Identity = 54/128 (42.19%), Postives = 75/128 (58.59%), Query Frame = 1
BLAST of CmaCh01G004120 vs. NCBI nr
Match: gi|659086659|ref|XP_008444054.1| (PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c-like isoform X1 [Cucumis melo]) HSP 1 Score: 504.6 bits (1298), Expect = 1.2e-139 Identity = 243/302 (80.46%), Postives = 265/302 (87.75%), Query Frame = 1
BLAST of CmaCh01G004120 vs. NCBI nr
Match: gi|778692165|ref|XP_011653415.1| (PREDICTED: ubiquitin-like domain-containing CTD phosphatase 1 isoform X1 [Cucumis sativus]) HSP 1 Score: 498.4 bits (1282), Expect = 8.6e-138 Identity = 238/302 (78.81%), Postives = 264/302 (87.42%), Query Frame = 1
BLAST of CmaCh01G004120 vs. NCBI nr
Match: gi|659086665|ref|XP_008444058.1| (PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c-like isoform X2 [Cucumis melo]) HSP 1 Score: 483.4 bits (1243), Expect = 2.9e-133 Identity = 236/302 (78.15%), Postives = 258/302 (85.43%), Query Frame = 1
BLAST of CmaCh01G004120 vs. NCBI nr
Match: gi|778692167|ref|XP_011653416.1| (PREDICTED: uncharacterized protein LOC101216785 isoform X2 [Cucumis sativus]) HSP 1 Score: 478.4 bits (1230), Expect = 9.2e-132 Identity = 232/302 (76.82%), Postives = 257/302 (85.10%), Query Frame = 1
BLAST of CmaCh01G004120 vs. NCBI nr
Match: gi|694379408|ref|XP_009365893.1| (PREDICTED: uncharacterized protein LOC103955716 isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 343.2 bits (879), Expect = 4.6e-91 Identity = 160/236 (67.80%), Postives = 189/236 (80.08%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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