CmaCh01G003470 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh01G003470
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUbiquitin-protein ligase/ zinc ion binding protein
LocationCma_Chr01 : 1723603 .. 1725899 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTTCTCGATCATCGGACGGCGAAAAGGAGAGGCGAAGTTCGGTCAACTCTAGCAGATGGAAGAACGAGACGATGAAAGTCATACTTACCGATCCTCAAGTTCTCGATTGCTATATTTGTTGCGTGCCCTTGTCCGTTCCTGTTTACCAGGTTCGATTAAGCTTTTTTTCCGCTTGCATTTTGCTTACGATTATCGTTCTTGTTAATCTTCTTGTCTATGATGCTTTGTTCTTCTCGTCCATTTTTTTTCTTGCAATTTTGACTACTGTAGTTCACTTAGTGTGTTTGCTGGATTTGACGGTTTCCAAATCCCCCTTACTATGAGATTTTAACCTTCTCGTTTAGAAGTTTATTGTGCAGACTGTGGATTTCCAATGGAAGTTATGGATTATGATAAAAATTAAAGAAATATGCCGAAGTTTTGAACAGTTATTGGCAAAGATCGTGGAGGTATGGATTGTAGAACTGAAGATATCAAATGTTTTGATGTAAATAATCTTTGAACATGAAAATTATTCTGGATATTATGGGGACATAATCACAAATGGTTGGGATTGAATTGAAATCTTTGGTGAGGATTGTTGGAGTCTACGTTGGCTATGAGGAAGGCTATGAGTATATAAGCAACGGATACTATCTTCATTGGTATGAAGCCTTTTGGAGAAACCAAAAGTAAAGCCATGAGAGCTTATCACATCATTGTGGCCCACATGTTCCTATCAAGTAGTATCATAGTCTTATTCTTATCTTAACTTAGCGGTTTCCATAGAATCCTCAGGTTTCGAATAAAAAAAGTTGTGAGCCTAGAAGGTGTGACTTAGATGTCGAACAAAAAAAAAAAGTGAGCCTCGAAGTTGTAGTCATAGTGAAGATCCGTGGTAGAGCTCTATTGAACTAGCAATGTGCTCTAGAAAAGAGGAGTTGTCTAAAATAGTGTTAAGACAGACACGTGACTATTAAAAAGAGACGCAATAGTGTACTCTGTTCGAAGGGAGGATTGTTGAGGATTGTTGAAGTCCCACATTGGCCAATTAAGATGGAAGACCGTGGGTATATAAATAAGGGACACTATCTTCTTTGGTATGAAGCGTTTAGGGAAATCAAAGGCCAAGCCATGAGAGATTATACTCATACTGGACAATATCATTCTAATGTGAAGGTCCCTTGTTCCTATCAATCTTGCCCTGAATTGCTTTTCTTGTTACATTATCTCGAGCAAATGCCAAAAATCAAGCTGTACTTATTTGATATTTTTTTCACCTTGAACTTGAAAGGGATGAATATAGAAGAAAATAAGCATATATTGGTGTATATAATCTCTTTTCTTGTTATCTTTGAGTCTATTTTATGTCATATAGCATATACTTTGGTGCTGAGATGTTGATTGTTGGATGAATTAGTGTGAGAATGGGCATATTTCTTGTTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCTAGCTGCAGCTTGCCAATTGGCTACATGCGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATTAAGATGCCCTGCCAAAACTCAAGATACGGATGCAAAACTACAACGAATTTGAACCAAATAAATGAGCATGAGACATTGTGCCCATATCAACCCTGTTCGTGCCCTTTATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCAAGACTCCGCCAAAAGCATCTCATACAATTCAAGGTTCACAATATGCTTGAACAGTGATGATAAATATTGTATCTTTCAAGCAGAGAACGATGGTGTTTTGTTTGTCCTCTCTTACTCGTTTGAAACTTTTGGTGATGCGGTTACTTTGAAAAGGATTGGACCTCGGTCGTCTGAGAAAAAGTTTTGTTATGATATTAAAGCCAAATCACACGGGAATGTTCTTTCTTTGCTATCAGTGGCGAAGGAGATCCAACGTTGGACTGAAGATCCTCCTTCCAAGGGATCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAGGACCAACATTGAGGATCATCACAGGTGCACATTCATTTTAAAACAAAGCTCAATTATTGTTTAAACTGTCTTAACGTTGTTGGCTGGCTCTGATCTTTGTCACCTAAACTTTCTATCTGGGGGGGAAGGACTTGGTGCATGCTTTTGTGCATATCATCATCTTTTATCATGCATATCCAGTAATAAAATGCATCTTTTGTGTATGATAGATGGATAGCATATTCAACATTGTC

mRNA sequence

ATGGCGGGTTCTCGATCATCGGACGGCGAAAAGGAGAGGCGAAGTTCGGTCAACTCTAGCAGATGGAAGAACGAGACGATGAAAGTCATACTTACCGATCCTCAAGTTCTCGATTGCTATATTTGTTGCGTGCCCTTGTCCGTTCCTGTTTACCAGTGTGAGAATGGGCATATTTCTTGTTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCTAGCTGCAGCTTGCCAATTGGCTACATGCGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATTAAGATGCCCTGCCAAAACTCAAGATACGGATGCAAAACTACAACGAATTTGAACCAAATAAATGAGCATGAGACATTGTGCCCATATCAACCCTGTTCGTGCCCTTTATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCAAGACTCCGCCAAAAGCATCTCATACAATTCAAGGTTCACAATATGCTTGAACAGTGATGATAAATATTGTATCTTTCAAGCAGAGAACGATGGTGTTTTGTTTGTCCTCTCTTACTCGTTTGAAACTTTTGGTGATGCGGTTACTTTGAAAAGGATTGGACCTCGGTCGTCTGAGAAAAAGTTTTGTTATGATATTAAAGCCAAATCACACGGGAATGTTCTTTCTTTGCTATCAGTGGCGAAGGAGATCCAACGTTGGACTGAAGATCCTCCTTCCAAGGGATCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGAGGACCAACATTGAGGATCATCACAGGTGCACATTCATTTTAAAACAAAGCTCAATTATTGTTTAAACTGTCTTAACGTTGTTGGCTGGCTCTGATCTTTGTCACCTAAACTTTCTATCTGGGGGGGAAGGACTTGGTGCATGCTTTTGTGCATATCATCATCTTTTATCATGCATATCCAGTAATAAAATGCATCTTTTGTGTATGATAGATGGATAGCATATTCAACATTGTC

Coding sequence (CDS)

ATGGCGGGTTCTCGATCATCGGACGGCGAAAAGGAGAGGCGAAGTTCGGTCAACTCTAGCAGATGGAAGAACGAGACGATGAAAGTCATACTTACCGATCCTCAAGTTCTCGATTGCTATATTTGTTGCGTGCCCTTGTCCGTTCCTGTTTACCAGTGTGAGAATGGGCATATTTCTTGTTCTAGCTGCTGCTCCAAAGTTCACAATAAATGCCCTAGCTGCAGCTTGCCAATTGGCTACATGCGTTGCAGAGCGATCGAGAAGGTTCTTGAATCAATTAAGATGCCCTGCCAAAACTCAAGATACGGATGCAAAACTACAACGAATTTGAACCAAATAAATGAGCATGAGACATTGTGCCCATATCAACCCTGTTCGTGCCCTTTATCTGATTGCTCTTATGTTGATTCGGCAGAGCATTTGGGGTCACACTTCAGAAAAAGGCACCAAGACTCCGCCAAAAGCATCTCATACAATTCAAGGTTCACAATATGCTTGAACAGTGATGATAAATATTGTATCTTTCAAGCAGAGAACGATGGTGTTTTGTTTGTCCTCTCTTACTCGTTTGAAACTTTTGGTGATGCGGTTACTTTGAAAAGGATTGGACCTCGGTCGTCTGAGAAAAAGTTTTGTTATGATATTAAAGCCAAATCACACGGGAATGTTCTTTCTTTGCTATCAGTGGCGAAGGAGATCCAACGTTGGACTGAAGATCCTCCTTCCAAGGGATCGCTTTTGATTCCAAATGAGTTCTTCGGATCTTCTTCAGCCCAGACGATCTTGGAGATTCGCATTTGGCCTTCACGCTGA

Protein sequence

MAGSRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIWPSR
Homology
[Close]
BLAST of CmaCh01G003470 vs. Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.4e-52
Identity = 108/276 (39.13%), Postives = 161/276 (58.33%), Query Frame = 1 

Query: 3   GSRSSDGEKE-----RR-----SSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQ 62
           GS S D ++E     RR     +S +SS  K+  + V L DP VLDC ICC PL +P++Q
Sbjct: 67  GSTSDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQ 126

Query: 63  CENGHISCSSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQ 122
           C+NGH++C+ CC+KV N+CPSC+LPIGY+RCRA+EKV+E+ ++ C N++YGCK +T+   
Sbjct: 127 CDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGN 186

Query: 123 INEHETLCPYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKY 182
              HE +C + PCSCP+ DC Y    + L +H R  H+D   S  +N+R TI L+ + K 
Sbjct: 187 RFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKT 246

Query: 183 CIFQAENDGVLFVLSYSFETFGDAVTLKRIGPRS-SEKKFCYDIKAKSHGNVLSLLSVAK 242
            I Q ENDG + V+          V++  I P +    +    +   +  ++L    + K
Sbjct: 247 TILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVK 306

Query: 243 EIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIW 268
            IQ+ T + P  G +LIP+  F   S    L ++IW
Sbjct: 307 NIQKVTNEHPEDGFMLIPSYLF---SGNDNLNLQIW 339

[Close]
BLAST of CmaCh01G003470 vs. Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 88/268 (32.84%), Postives = 144/268 (53.73%), Query Frame = 1 

Query: 3   GSRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSS 62
           GS S   +K + SS ++++   +    +L D ++LDC IC    ++P++QC+NGH++CSS
Sbjct: 15  GSNSILSQKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQCDNGHLACSS 74

Query: 63  CCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPY 122
           CC K++NKCP+C+ P+G+ RCRA+E VLESI +PC N++ GCK   +  +   HE  C +
Sbjct: 75  CCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMF 134

Query: 123 QPCSCPLSDCSYVDSAEHLGSHFRKRHQD--SAKSISYNSRFTICLNSDDKYCIFQAEND 182
             C+CP  DC+Y  S + L +H+R  H +     +   +   ++ +N   K  I      
Sbjct: 135 SHCACPALDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLT 194

Query: 183 GVLFVLSYSFETFGDAVTLKRIGPRSSE-KKFCYDIKAKSHGNVLSLLS-VAKEIQRWTE 242
             LF +    E +G  VT+  I P S E  ++ Y +     G+ +   S   K + + + 
Sbjct: 195 NHLFAVQCFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSF 254

Query: 243 DPPSKGSLLIPNEFFGSSSAQTILEIRI 267
             P +  +LIPN          +LE+RI
Sbjct: 255 QTPQENFMLIPNSLLRGD----VLEMRI 278

[Close]
BLAST of CmaCh01G003470 vs. Swiss-Prot
Match: SIL11_ARATH (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE=2 SV=2)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 92/258 (35.66%), Postives = 135/258 (52.33%), Query Frame = 1 

Query: 2   AGSRSSDGEKERRSS--VNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHIS 61
           + S   +   +R+SS      R +NET    L D  VLDC +C  PL++P +QC++GHI 
Sbjct: 4   SNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIV 63

Query: 62  CSSCCSKVHNKCPS--CSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHE 121
           C+ C +KV NKCP   C LPIG  RC A+E+VLES  +PCQN+ +GC  + +  +++ HE
Sbjct: 64  CNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVSSHE 123

Query: 122 TLCPYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYN---SRFTICLNSDDKYCI 181
             C Y  CSCP  +C+Y  S   +  HF +RH  ++  +S     S   + +N  +K  +
Sbjct: 124 KECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTIVSSKWGYSTVDVLINIKEKVSV 183

Query: 182 FQAENDGVLFVLSYSFETFGDAVTLKRIGPRSSE-KKFCYDIKAKSHG-NVLSLLSVAKE 241
                  +LFV+    E  G  VT++RI P +SE KKF Y +     G NV       K 
Sbjct: 184 LWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYESPEVKR 243

Query: 242 IQRWTEDPPSKGSLLIPN 251
           +       P    + +PN
Sbjct: 244 LLEVNSQIPDDSFMFVPN 261

[Close]
BLAST of CmaCh01G003470 vs. Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g37870 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.1e-38
Identity = 88/255 (34.51%), Postives = 142/255 (55.69%), Query Frame = 1 

Query: 4   SRSSDGEKERRSSVNSSRWK---NETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISC 63
           S  +  +K   SS++S   +   ++T   +LTD  +LDC IC   L +PV+QC NGH++C
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 64  SSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLC 123
           SSCC K+ NKCP+C+LP+G++RCRA+E+VLES+ +PC+ +  GC  T    + + HE +C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 124 PYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYN--SRFTICLNSDDKYCIFQAE 183
            + PCSCP+  C+Y  S + L  H+   H   + + S+N  S     +   DK  I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 184 NDGVLFVLSYSFETFGDAVTLKRIGPRSSE-KKFCYDIKAKS-HGNVLSLLS-VAKEIQR 243
              +LFV+    E  G  V++  I P + E  +F Y +   +  G  ++  S   K++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLK 246

Query: 244 WTEDPPSKGSLLIPN 251
            +   P    +LIP+
Sbjct: 247 VSSQRPKDSFMLIPH 261

[Close]
BLAST of CmaCh01G003470 vs. Swiss-Prot
Match: SINL4_ARATH (E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana GN=At1g66650 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37
Identity = 90/231 (38.96%), Postives = 127/231 (54.98%), Query Frame = 1 

Query: 29  VILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLPIGYMRCRAIEK 88
           V L +  VL+C  C  PL  P++QC NGH++C  CC K+  +C  C LPIG +RCRA+EK
Sbjct: 76  VTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEK 135

Query: 89  VLESIKMPCQNSRYGCK-TTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEHLGSHFRK 148
           V+++  + C N+ YGCK +TT  NQ+  HE +C + PCSCP+ DC+Y+   + L +HFR 
Sbjct: 136 VIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRA 195

Query: 149 RHQDSAKSIS-----YNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLKRI 208
            H+ S   I+         F + L+S DK  IF  E  G LFV+     + G   T+  I
Sbjct: 196 THKVSPGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVVQGFIGSHGVYATVSHI 255

Query: 209 GPRSSE-KKFCYDIKAKSHGNVLSLLSVAKEIQ--RWTEDPPSKGSLLIPN 251
            P   E +KF   +      + L L    K IQ  R  E+ P +  LLIP+
Sbjct: 256 APMVPEVRKFSCSLARLRPYSTLRLGLEVKNIQKLRSQEEQPQEDFLLIPS 306

[Close]
BLAST of CmaCh01G003470 vs. TrEMBL
Match: A0A0A0L9Z6_CUCSA (E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 5.8e-108
Identity = 190/269 (70.63%), Postives = 224/269 (83.27%), Query Frame = 1 

Query: 1   MAGSRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISC 60
           M  SRSSDG  ERRSSV S R  N T+ VI TDPQ+LDCYICC PLS+PV+QCENGHI+C
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLC 120
           SSCC+K  NKCPSC+L IGY+RCRAIEKVLESIK+PCQN+ YGCKT   LN IN+HE+LC
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 PYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAEND 180
            Y+PCSCPL +C++V S E LG HF K+H+DSAK  SYN+RFTICLN+ D + I +AEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 GVLFVLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDP 240
           GVLF LSY+FE FG+AVT+ RIGP SSEKKFCY+IKAK+ G+VLSL S+AKEIQ   + P
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PSKGSLLIPNEFFGSSSAQTILEIRIWPS 270
           PSKGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]
BLAST of CmaCh01G003470 vs. TrEMBL
Match: A0A061EGM7_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.1e-65
Identity = 122/265 (46.04%), Postives = 173/265 (65.28%), Query Frame = 1 

Query: 10  EKERRSSVNSSRWKNET-----MKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCC 69
           E+E  S         ET     + + LTDP+VLDC IC   L++PV+QCENGHI+CS CC
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQCENGHIACSICC 130

Query: 70  SKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQP 129
            K+ NKCPSC+ PIGY RCRAIEKVLES+K+ CQN++YGC+     +   +HE +CPY P
Sbjct: 131 IKIRNKCPSCATPIGYSRCRAIEKVLESVKVSCQNTKYGCREAFRYSIKQKHEKICPYAP 190

Query: 130 CSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLF 189
           CSCPL+DC++  S++ L  HFR +H+ SA    Y+   +I +  D+++CI Q E DG LF
Sbjct: 191 CSCPLADCNFEGSSKELYEHFRDKHKYSATRFQYDRTISITVGIDERFCILQEEQDGSLF 250

Query: 190 VLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAK--SHGNVLSLLSVAKEIQRWTEDPPS 249
           +L+   ET G+ VTL RIGP S E+ F YD+ AK  +  + + L S  K   +  ++PPS
Sbjct: 251 ILNNKVETLGNVVTLSRIGP-SEERGFFYDLMAKALTEASTVRLQSFTKSTPKQVDNPPS 310

Query: 250 KGSLLIPNEFFGSSSAQTILEIRIW 268
            G LL+P++ F  +S +  +++R+W
Sbjct: 311 LGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]
BLAST of CmaCh01G003470 vs. TrEMBL
Match: A0A061EG86_THECC (E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.1e-65
Identity = 122/265 (46.04%), Postives = 173/265 (65.28%), Query Frame = 1 

Query: 10  EKERRSSVNSSRWKNET-----MKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCC 69
           E+E  S         ET     + + LTDP+VLDC IC   L++PV+QCENGHI+CS CC
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQCENGHIACSICC 130

Query: 70  SKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQP 129
            K+ NKCPSC+ PIGY RCRAIEKVLES+K+ CQN++YGC+     +   +HE +CPY P
Sbjct: 131 IKIRNKCPSCATPIGYSRCRAIEKVLESVKVSCQNTKYGCREAFRYSIKQKHEKICPYAP 190

Query: 130 CSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLF 189
           CSCPL+DC++  S++ L  HFR +H+ SA    Y+   +I +  D+++CI Q E DG LF
Sbjct: 191 CSCPLADCNFEGSSKELYEHFRDKHKYSATRFQYDRTISITVGIDERFCILQEEQDGSLF 250

Query: 190 VLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAK--SHGNVLSLLSVAKEIQRWTEDPPS 249
           +L+   ET G+ VTL RIGP S E+ F YD+ AK  +  + + L S  K   +  ++PPS
Sbjct: 251 ILNNKVETLGNVVTLSRIGP-SEERGFFYDLMAKALTEASTVRLQSFTKSTPKQVDNPPS 310

Query: 250 KGSLLIPNEFFGSSSAQTILEIRIW 268
            G LL+P++ F  +S +  +++R+W
Sbjct: 311 LGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]
BLAST of CmaCh01G003470 vs. TrEMBL
Match: W9S0Z7_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 8.7e-64
Identity = 129/253 (50.99%), Postives = 165/253 (65.22%), Query Frame = 1 

Query: 4   SRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSC 63
           S  ++ E  R  S NS R    ++ V LTDP VLDC IC   L+VPV+QCENGHI+CSSC
Sbjct: 93  SADANQEDPRPLSTNSDR----SISVFLTDPDVLDCCICFEALTVPVFQCENGHIACSSC 152

Query: 64  CSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQ 123
           C+K+ NKCPSCS PIGY RCRAIEKVLES+K+ CQN +YGCK   + ++I +HET C + 
Sbjct: 153 CTKLGNKCPSCSWPIGYNRCRAIEKVLESVKIACQNKQYGCKEMVSYSEIKDHETTCTHA 212

Query: 124 PCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVL 183
           PCSCPL+ C+++ SA+ L  HFR +H DSA    YN  FT+ LN  DK+ + Q  + G L
Sbjct: 213 PCSCPLTSCNFISSAKQLYQHFRSQHADSAVLFQYNCDFTVTLNEGDKFLVLQERDGGGL 272

Query: 184 FVLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDPPSK 243
           F+L+   ET G+ V++  IGP S  K + Y++ AK  GN L L S A   Q   +   S 
Sbjct: 273 FILNNETETLGNLVSVSCIGPYSFGKSY-YNLLAKCDGNTLRLESFATCTQGQADYSLSS 332

Query: 244 GSLLIPNEFFGSS 257
             LLIP  FFGSS
Sbjct: 333 VYLLIPPGFFGSS 340

[Close]
BLAST of CmaCh01G003470 vs. TrEMBL
Match: V4UW18_9ROSI (E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.7e-62
Identity = 121/249 (48.59%), Postives = 159/249 (63.86%), Query Frame = 1 

Query: 8   DGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCCSKV 67
           +GEK        SR  N    V +TDP+V DC IC   L+ PV+QCENGHI+CS+CCSK+
Sbjct: 59  NGEKADLDLAGPSR--NGPFSVTVTDPEVFDCPICYESLTAPVFQCENGHIACSTCCSKI 118

Query: 68  HNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQPCSC 127
            NKCPSC  PIGY RCRAIEKVLES+K+ C+NS YGCK T +  + ++HE +CP+ PCSC
Sbjct: 119 MNKCPSCCTPIGYNRCRAIEKVLESVKVTCRNSNYGCKVTMSYGKKHDHEKICPHVPCSC 178

Query: 128 PLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLFVLS 187
           P+ DC++V SA HL  HF  +H++SA    YN    + LN  +++ + Q E DGVLF+LS
Sbjct: 179 PIPDCNFVGSANHLYKHFSAKHKNSALHFLYNEVVEVTLNVKNRFIVLQEEGDGVLFILS 238

Query: 188 YSFETFGDAVTLKRIGPRSSEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDPPSKGSLL 247
              ET G  +++  I P S +    Y I A   G+ +   S  K IQ   ++PPS G LL
Sbjct: 239 SRSETLGHVISVSCIAP-SCKGCLFYSIFAGPAGSTVRFQSFTKNIQNRVDNPPSTGFLL 298

Query: 248 IPNEFFGSS 257
           +P E FGSS
Sbjct: 299 VPIESFGSS 304

[Close]
BLAST of CmaCh01G003470 vs. TAIR10
Match: AT5G37930.1 (AT5G37930.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 205.7 bits (522), Expect = 3.6e-53
Identity = 108/276 (39.13%), Postives = 161/276 (58.33%), Query Frame = 1 

Query: 3   GSRSSDGEKE-----RR-----SSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQ 62
           GS S D ++E     RR     +S +SS  K+  + V L DP VLDC ICC PL +P++Q
Sbjct: 67  GSTSDDSDREVVIEERRFGKFVNSQSSSSSKDSPLSVTLLDPDVLDCPICCEPLKIPIFQ 126

Query: 63  CENGHISCSSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQ 122
           C+NGH++C+ CC+KV N+CPSC+LPIGY+RCRA+EKV+E+ ++ C N++YGCK +T+   
Sbjct: 127 CDNGHLACTLCCTKVRNRCPSCTLPIGYVRCRAMEKVIEASRVSCLNAKYGCKESTSYGN 186

Query: 123 INEHETLCPYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKY 182
              HE +C + PCSCP+ DC Y    + L +H R  H+D   S  +N+R TI L+ + K 
Sbjct: 187 RFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISFVWNTRLTISLDLNKKT 246

Query: 183 CIFQAENDGVLFVLSYSFETFGDAVTLKRIGPRS-SEKKFCYDIKAKSHGNVLSLLSVAK 242
            I Q ENDG + V+          V++  I P +    +    +   +  ++L    + K
Sbjct: 247 TILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSLLKQGFMVK 306

Query: 243 EIQRWTEDPPSKGSLLIPNEFFGSSSAQTILEIRIW 268
            IQ+ T + P  G +LIP+  F   S    L ++IW
Sbjct: 307 NIQKVTNEHPEDGFMLIPSYLF---SGNDNLNLQIW 339

[Close]
BLAST of CmaCh01G003470 vs. TAIR10
Match: AT5G37890.1 (AT5G37890.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-39
Identity = 88/268 (32.84%), Postives = 144/268 (53.73%), Query Frame = 1 

Query: 3   GSRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSS 62
           GS S   +K + SS ++++   +    +L D ++LDC IC    ++P++QC+NGH++CSS
Sbjct: 15  GSNSILSQKRQLSSSDAAKRDAKKRSTMLMDLEILDCPICYEAFTIPIFQCDNGHLACSS 74

Query: 63  CCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPY 122
           CC K++NKCP+C+ P+G+ RCRA+E VLESI +PC N++ GCK   +  +   HE  C +
Sbjct: 75  CCPKLNNKCPACTSPVGHNRCRAMESVLESILIPCPNAKLGCKKNVSYGKELTHEKECMF 134

Query: 123 QPCSCPLSDCSYVDSAEHLGSHFRKRHQD--SAKSISYNSRFTICLNSDDKYCIFQAEND 182
             C+CP  DC+Y  S + L +H+R  H +     +   +   ++ +N   K  I      
Sbjct: 135 SHCACPALDCNYTSSYKDLYTHYRITHMEINQINTFICDIPLSVRMNISKKILIRTEHLT 194

Query: 183 GVLFVLSYSFETFGDAVTLKRIGPRSSE-KKFCYDIKAKSHGNVLSLLS-VAKEIQRWTE 242
             LF +    E +G  VT+  I P S E  ++ Y +     G+ +   S   K + + + 
Sbjct: 195 NHLFAVQCFREPYGVYVTVSCIAPSSPELSQYSYALSYTVDGHTVIYQSPEVKRVLKLSF 254

Query: 243 DPPSKGSLLIPNEFFGSSSAQTILEIRI 267
             P +  +LIPN          +LE+RI
Sbjct: 255 QTPQENFMLIPNSLLRGD----VLEMRI 278

[Close]
BLAST of CmaCh01G003470 vs. TAIR10
Match: AT5G62800.1 (AT5G62800.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-39
Identity = 92/258 (35.66%), Postives = 135/258 (52.33%), Query Frame = 1 

Query: 2   AGSRSSDGEKERRSS--VNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHIS 61
           + S   +   +R+SS      R +NET    L D  VLDC +C  PL++P +QC++GHI 
Sbjct: 4   SNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIV 63

Query: 62  CSSCCSKVHNKCPS--CSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHE 121
           C+ C +KV NKCP   C LPIG  RC A+E+VLES  +PCQN+ +GC  + +  +++ HE
Sbjct: 64  CNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVSSHE 123

Query: 122 TLCPYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYN---SRFTICLNSDDKYCI 181
             C Y  CSCP  +C+Y  S   +  HF +RH  ++  +S     S   + +N  +K  +
Sbjct: 124 KECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTIVSSKWGYSTVDVLINIKEKVSV 183

Query: 182 FQAENDGVLFVLSYSFETFGDAVTLKRIGPRSSE-KKFCYDIKAKSHG-NVLSLLSVAKE 241
                  +LFV+    E  G  VT++RI P +SE KKF Y +     G NV       K 
Sbjct: 184 LWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYESPEVKR 243

Query: 242 IQRWTEDPPSKGSLLIPN 251
           +       P    + +PN
Sbjct: 244 LLEVNSQIPDDSFMFVPN 261

[Close]
BLAST of CmaCh01G003470 vs. TAIR10
Match: AT5G37870.1 (AT5G37870.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-39
Identity = 88/255 (34.51%), Postives = 142/255 (55.69%), Query Frame = 1 

Query: 4   SRSSDGEKERRSSVNSSRWK---NETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISC 63
           S  +  +K   SS++S   +   ++T   +LTD  +LDC IC   L +PV+QC NGH++C
Sbjct: 7   SERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCGNGHLAC 66

Query: 64  SSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLC 123
           SSCC K+ NKCP+C+LP+G++RCRA+E+VLES+ +PC+ +  GC  T    + + HE +C
Sbjct: 67  SSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRESTHEKIC 126

Query: 124 PYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYN--SRFTICLNSDDKYCIFQAE 183
            + PCSCP+  C+Y  S + L  H+   H   + + S+N  S     +   DK  I +  
Sbjct: 127 NFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKILIERVY 186

Query: 184 NDGVLFVLSYSFETFGDAVTLKRIGPRSSE-KKFCYDIKAKS-HGNVLSLLS-VAKEIQR 243
              +LFV+    E  G  V++  I P + E  +F Y +   +  G  ++  S   K++ +
Sbjct: 187 EKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPKVKKVLK 246

Query: 244 WTEDPPSKGSLLIPN 251
            +   P    +LIP+
Sbjct: 247 VSSQRPKDSFMLIPH 261

[Close]
BLAST of CmaCh01G003470 vs. TAIR10
Match: AT1G66650.1 (AT1G66650.1 Protein with RING/U-box and TRAF-like domains)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 90/231 (38.96%), Postives = 127/231 (54.98%), Query Frame = 1 

Query: 29  VILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCCSKVHNKCPSCSLPIGYMRCRAIEK 88
           V L +  VL+C  C  PL  P++QC NGH++C  CC K+  +C  C LPIG +RCRA+EK
Sbjct: 76  VTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKKRCSFCKLPIGDVRCRAMEK 135

Query: 89  VLESIKMPCQNSRYGCK-TTTNLNQINEHETLCPYQPCSCPLSDCSYVDSAEHLGSHFRK 148
           V+++  + C N+ YGCK +TT  NQ+  HE +C + PCSCP+ DC+Y+   + L +HFR 
Sbjct: 136 VIKAGLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRA 195

Query: 149 RHQDSAKSIS-----YNSRFTICLNSDDKYCIFQAENDGVLFVLSYSFETFGDAVTLKRI 208
            H+ S   I+         F + L+S DK  IF  E  G LFV+     + G   T+  I
Sbjct: 196 THKVSPGDINSFVFDRPVIFGLDLDSSDKMVIFVEEKQGNLFVVQGFIGSHGVYATVSHI 255

Query: 209 GPRSSE-KKFCYDIKAKSHGNVLSLLSVAKEIQ--RWTEDPPSKGSLLIPN 251
            P   E +KF   +      + L L    K IQ  R  E+ P +  LLIP+
Sbjct: 256 APMVPEVRKFSCSLARLRPYSTLRLGLEVKNIQKLRSQEEQPQEDFLLIPS 306

[Close]
BLAST of CmaCh01G003470 vs. NCBI nr
Match: gi|778679778|ref|XP_004140738.2| (PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 8.3e-108
Identity = 190/269 (70.63%), Postives = 224/269 (83.27%), Query Frame = 1 

Query: 1   MAGSRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISC 60
           M  SRSSDG  ERRSSV S R  N T+ VI TDPQ+LDCYICC PLS+PV+QCENGHI+C
Sbjct: 1   MEDSRSSDGGSERRSSVISRRGTNGTLNVIFTDPQILDCYICCEPLSIPVFQCENGHIAC 60

Query: 61  SSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLC 120
           SSCC+K  NKCPSC+L IGY+RCRAIEKVLESIK+PCQN+ YGCKT   LN IN+HE+LC
Sbjct: 61  SSCCTKAQNKCPSCTLAIGYIRCRAIEKVLESIKLPCQNAIYGCKTVMGLNLINDHESLC 120

Query: 121 PYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAEND 180
            Y+PCSCPL +C++V S E LG HF K+H+DSAK  SYN+RFTICLN+ D + I +AEND
Sbjct: 121 RYEPCSCPLDNCTFVGSTEQLGLHFTKKHKDSAKIFSYNTRFTICLNNGDTHRILKAEND 180

Query: 181 GVLFVLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDP 240
           GVLF LSY+FE FG+AVT+ RIGP SSEKKFCY+IKAK+ G+VLSL S+AKEIQ   + P
Sbjct: 181 GVLFFLSYTFEIFGNAVTMNRIGPLSSEKKFCYEIKAKTLGSVLSLQSIAKEIQGLIKVP 240

Query: 241 PSKGSLLIPNEFFGSSSAQTILEIRIWPS 270
           PSKGSLLIPNE+FGSS+ QT+LEI IWP+
Sbjct: 241 PSKGSLLIPNEYFGSST-QTMLEISIWPA 268

[Close]
BLAST of CmaCh01G003470 vs. NCBI nr
Match: gi|659114528|ref|XP_008457096.1| (PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis melo])

HSP 1 Score: 299.3 bits (765), Expect = 6.8e-78
Identity = 143/215 (66.51%), Postives = 171/215 (79.53%), Query Frame = 1 

Query: 1   MAGSRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISC 60
           MA S+SSDG  ERRSSV S R  N TM VI TDPQ+LDCYIC   LS+P++QCEN HI+C
Sbjct: 1   MADSQSSDGGSERRSSVISRRGTNGTMNVIFTDPQILDCYICWNXLSIPIFQCENXHIAC 60

Query: 61  SSCCSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLC 120
           SSCC+KV NKCPSC L IGY+RCRAIEKVLESIK+PC+N+ Y CKT  +LN IN+ ETLC
Sbjct: 61  SSCCTKVQNKCPSCILAIGYIRCRAIEKVLESIKLPCKNAIYRCKTAMDLNLINDQETLC 120

Query: 121 PYQPCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAEND 180
            Y+PCSCPL +C++V  AE L  HF +RH++SAK  SYN+RFTICLN+ D Y I +AE+D
Sbjct: 121 RYEPCSCPLDNCTFVGLAEQLYLHFSRRHKNSAKHFSYNTRFTICLNNGDTYRILKAEDD 180

Query: 181 GVLFVLSYSFETFGDAVTLKRIGPRSSEKKFCYDI 216
           GVLF LSY+FE FG+A+T+  IGP SSEKKF Y I
Sbjct: 181 GVLFFLSYTFEIFGNAITVNWIGPLSSEKKFSYKI 215

[Close]
BLAST of CmaCh01G003470 vs. NCBI nr
Match: gi|590652270|ref|XP_007033104.1| (RING/U-box and TRAF-like domains, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 257.3 bits (656), Expect = 3.0e-65
Identity = 122/265 (46.04%), Postives = 173/265 (65.28%), Query Frame = 1 

Query: 10  EKERRSSVNSSRWKNET-----MKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCC 69
           E+E  S         ET     + + LTDP+VLDC IC   L++PV+QCENGHI+CS CC
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQCENGHIACSICC 130

Query: 70  SKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQP 129
            K+ NKCPSC+ PIGY RCRAIEKVLES+K+ CQN++YGC+     +   +HE +CPY P
Sbjct: 131 IKIRNKCPSCATPIGYSRCRAIEKVLESVKVSCQNTKYGCREAFRYSIKQKHEKICPYAP 190

Query: 130 CSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLF 189
           CSCPL+DC++  S++ L  HFR +H+ SA    Y+   +I +  D+++CI Q E DG LF
Sbjct: 191 CSCPLADCNFEGSSKELYEHFRDKHKYSATRFQYDRTISITVGIDERFCILQEEQDGSLF 250

Query: 190 VLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAK--SHGNVLSLLSVAKEIQRWTEDPPS 249
           +L+   ET G+ VTL RIGP S E+ F YD+ AK  +  + + L S  K   +  ++PPS
Sbjct: 251 ILNNKVETLGNVVTLSRIGP-SEERGFFYDLMAKALTEASTVRLQSFTKSTPKQVDNPPS 310

Query: 250 KGSLLIPNEFFGSSSAQTILEIRIW 268
            G LL+P++ F  +S +  +++R+W
Sbjct: 311 LGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]
BLAST of CmaCh01G003470 vs. NCBI nr
Match: gi|590652274|ref|XP_007033105.1| (Ubiquitin-protein ligase, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 257.3 bits (656), Expect = 3.0e-65
Identity = 122/265 (46.04%), Postives = 173/265 (65.28%), Query Frame = 1 

Query: 10  EKERRSSVNSSRWKNET-----MKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSCC 69
           E+E  S         ET     + + LTDP+VLDC IC   L++PV+QCENGHI+CS CC
Sbjct: 71  EEEEESGAEQGAMSLETNRDGSISITLTDPEVLDCSICYEALTIPVFQCENGHIACSICC 130

Query: 70  SKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQP 129
            K+ NKCPSC+ PIGY RCRAIEKVLES+K+ CQN++YGC+     +   +HE +CPY P
Sbjct: 131 IKIRNKCPSCATPIGYSRCRAIEKVLESVKVSCQNTKYGCREAFRYSIKQKHEKICPYAP 190

Query: 130 CSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVLF 189
           CSCPL+DC++  S++ L  HFR +H+ SA    Y+   +I +  D+++CI Q E DG LF
Sbjct: 191 CSCPLADCNFEGSSKELYEHFRDKHKYSATRFQYDRTISITVGIDERFCILQEEQDGSLF 250

Query: 190 VLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAK--SHGNVLSLLSVAKEIQRWTEDPPS 249
           +L+   ET G+ VTL RIGP S E+ F YD+ AK  +  + + L S  K   +  ++PPS
Sbjct: 251 ILNNKVETLGNVVTLSRIGP-SEERGFFYDLMAKALTEASTVRLQSFTKSTPKQVDNPPS 310

Query: 250 KGSLLIPNEFFGSSSAQTILEIRIW 268
            G LL+P++ F  +S +  +++R+W
Sbjct: 311 LGFLLVPSQ-FSCNSRKLKMDLRLW 333

[Close]
BLAST of CmaCh01G003470 vs. NCBI nr
Match: gi|703146966|ref|XP_010108933.1| (E3 ubiquitin-protein ligase SINA-like 10 [Morus notabilis])

HSP 1 Score: 251.9 bits (642), Expect = 1.3e-63
Identity = 129/253 (50.99%), Postives = 165/253 (65.22%), Query Frame = 1 

Query: 4   SRSSDGEKERRSSVNSSRWKNETMKVILTDPQVLDCYICCVPLSVPVYQCENGHISCSSC 63
           S  ++ E  R  S NS R    ++ V LTDP VLDC IC   L+VPV+QCENGHI+CSSC
Sbjct: 93  SADANQEDPRPLSTNSDR----SISVFLTDPDVLDCCICFEALTVPVFQCENGHIACSSC 152

Query: 64  CSKVHNKCPSCSLPIGYMRCRAIEKVLESIKMPCQNSRYGCKTTTNLNQINEHETLCPYQ 123
           C+K+ NKCPSCS PIGY RCRAIEKVLES+K+ CQN +YGCK   + ++I +HET C + 
Sbjct: 153 CTKLGNKCPSCSWPIGYNRCRAIEKVLESVKIACQNKQYGCKEMVSYSEIKDHETTCTHA 212

Query: 124 PCSCPLSDCSYVDSAEHLGSHFRKRHQDSAKSISYNSRFTICLNSDDKYCIFQAENDGVL 183
           PCSCPL+ C+++ SA+ L  HFR +H DSA    YN  FT+ LN  DK+ + Q  + G L
Sbjct: 213 PCSCPLTSCNFISSAKQLYQHFRSQHADSAVLFQYNCDFTVTLNEGDKFLVLQERDGGGL 272

Query: 184 FVLSYSFETFGDAVTLKRIGPRSSEKKFCYDIKAKSHGNVLSLLSVAKEIQRWTEDPPSK 243
           F+L+   ET G+ V++  IGP S  K + Y++ AK  GN L L S A   Q   +   S 
Sbjct: 273 FILNNETETLGNLVSVSCIGPYSFGKSY-YNLLAKCDGNTLRLESFATCTQGQADYSLSS 332

Query: 244 GSLLIPNEFFGSS 257
             LLIP  FFGSS
Sbjct: 333 VYLLIPPGFFGSS 340

The following BLAST results are available for this feature:
BLAST of CmaCh01G003470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SIL10_ARATH6.4e-5239.13E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana GN=At5g37930 PE... [more]
SINL7_ARATH1.8e-3832.84E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana GN=At5g37890 PE=... [more]
SIL11_ARATH1.8e-3835.66E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana GN=At5g62800 PE... [more]
SINL6_ARATH4.1e-3834.51Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana GN=At5g... [more]
SINL4_ARATH2.6e-3738.96E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana GN=At1g66650 PE=... [more]
BLAST of CmaCh01G003470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9Z6_CUCSA5.8e-10870.63E3 ubiquitin-protein ligase OS=Cucumis sativus GN=Csa_3G185660 PE=3 SV=1[more]
A0A061EGM7_THECC2.1e-6546.04E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1[more]
A0A061EG86_THECC2.1e-6546.04E3 ubiquitin-protein ligase OS=Theobroma cacao GN=TCM_019286 PE=3 SV=1[more]
W9S0Z7_9ROSA8.7e-6450.99E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_027128 PE=3 SV=1[more]
V4UW18_9ROSI3.7e-6248.59E3 ubiquitin-protein ligase OS=Citrus clementina GN=CICLE_v10012174mg PE=3 SV=1[more]
BLAST of CmaCh01G003470 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37930.13.6e-5339.13 Protein with RING/U-box and TRAF-like domains[more]
AT5G37890.11.0e-3932.84 Protein with RING/U-box and TRAF-like domains[more]
AT5G62800.11.0e-3935.66 Protein with RING/U-box and TRAF-like domains[more]
AT5G37870.12.3e-3934.51 Protein with RING/U-box and TRAF-like domains[more]
AT1G66650.11.5e-3838.96 Protein with RING/U-box and TRAF-like domains[more]
BLAST of CmaCh01G003470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778679778|ref|XP_004140738.2|8.3e-10870.63PREDICTED: E3 ubiquitin-protein ligase SINA-like 10 [Cucumis sativus][more]
gi|659114528|ref|XP_008457096.1|6.8e-7866.51PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINA-like 10 [Cucumi... [more]
gi|590652270|ref|XP_007033104.1|3.0e-6546.04RING/U-box and TRAF-like domains, putative isoform 1 [Theobroma cacao][more]
gi|590652274|ref|XP_007033105.1|3.0e-6546.04Ubiquitin-protein ligase, putative isoform 2 [Theobroma cacao][more]
gi|703146966|ref|XP_010108933.1|1.3e-6350.99E3 ubiquitin-protein ligase SINA-like 10 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004162SINA-like
IPR008974TRAF-like
IPR013010Znf_SIAH
IPR013083Znf_RING/FYVE/PHD
IPR013323SIAH-type domain
IPR0181217-in-absentia-prot_TRAF-dom
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0007275multicellular organism development
GO:0016567protein ubiquitination
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0016874 ligase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004842 ubiquitin-protein transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G003470.1CmaCh01G003470.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004162E3 ubiquitin-protein ligase SIN-likePANTHERPTHR10315SEVEN IN ABSENTIA HOMOLOGcoord: 10..267
score: 1.1
IPR008974TRAF-likeunknownSSF49599TRAF domain-likecoord: 92..267
score: 5.04
IPR013010Zinc finger, SIAH-typePROFILEPS51081ZF_SIAHcoord: 92..150
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 26..98
score: 1.
IPR013323SIAH-type domainGENE3DG3DSA:3.90.890.10coord: 99..145
score: 2.0
IPR018121Seven-in-absentia protein, TRAF-like domainPFAMPF03145Sinacoord: 81..238
score: 1.1
NoneNo IPR availablePANTHERPTHR10315:SF43E3 UBIQUITIN-PROTEIN LIGASEcoord: 10..267
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh01G003470Cucurbita maxima (Rimu)cmacmaB255
CmaCh01G003470Cucumber (Gy14) v1cgycmaB0250
CmaCh01G003470Cucumber (Gy14) v1cgycmaB0551
CmaCh01G003470Cucurbita moschata (Rifu)cmacmoB462
CmaCh01G003470Cucurbita moschata (Rifu)cmacmoB468
CmaCh01G003470Wild cucumber (PI 183967)cmacpiB461
CmaCh01G003470Cucumber (Chinese Long) v2cmacuB458
CmaCh01G003470Melon (DHL92) v3.5.1cmameB431
CmaCh01G003470Watermelon (Charleston Gray)cmawcgB407
CmaCh01G003470Watermelon (97103) v1cmawmB434
CmaCh01G003470Cucurbita pepo (Zucchini)cmacpeB491
CmaCh01G003470Cucurbita pepo (Zucchini)cmacpeB494
CmaCh01G003470Bottle gourd (USVL1VR-Ls)cmalsiB440
CmaCh01G003470Cucumber (Gy14) v2cgybcmaB368
CmaCh01G003470Cucumber (Gy14) v2cgybcmaB371
CmaCh01G003470Melon (DHL92) v3.6.1cmamedB496
CmaCh01G003470Silver-seed gourdcarcmaB0241
CmaCh01G003470Silver-seed gourdcarcmaB1059
CmaCh01G003470Cucumber (Chinese Long) v3cmacucB0547
CmaCh01G003470Cucumber (Chinese Long) v3cmacucB0550
CmaCh01G003470Watermelon (97103) v2cmawmbB473
CmaCh01G003470Wax gourdcmawgoB0559