CmaCh01G002970 (gene) Cucurbita maxima (Rimu)

NameCmaCh01G002970
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionDUF3511 domain protein
LocationCma_Chr01 : 1427150 .. 1427452 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCATTTCCAATCGGCCCACGGCGGCGGACGAAGGGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTGCGAACCGAGTTGGGTCGGCATCAGCGGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGGAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGCCTACAGTGGATTAAGACTAAATGCTCCCGGATTGTCCATGGATATTGA

mRNA sequence

ATGGCCCATTTCCAATCGGCCCACGGCGGCGGACGAAGGGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTGCGAACCGAGTTGGGTCGGCATCAGCGGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGGAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGCCTACAGTGGATTAAGACTAAATGCTCCCGGATTGTCCATGGATATTGA

Coding sequence (CDS)

ATGGCCCATTTCCAATCGGCCCACGGCGGCGGACGAAGGGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTGCGAACCGAGTTGGGTCGGCATCAGCGGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGGAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGCCTACAGTGGATTAAGACTAAATGCTCCCGGATTGTCCATGGATATTGA

Protein sequence

MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
BLAST of CmaCh01G002970 vs. TrEMBL
Match: A0A0A0KV97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G002560 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.8e-29
Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 1

Query: 12  RRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKYKV 71
           RR+EIVSGK  G   + QIY SPNL T  NRVGSA A  KPW F DPE KRRKRIAKYKV
Sbjct: 4   RRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVGSA-ATGKPWGFADPEAKRRKRIAKYKV 63

Query: 72  YTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           YTVEG+VKDSLRKGL+WIK KCSRIVHG+
Sbjct: 64  YTVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

BLAST of CmaCh01G002970 vs. TrEMBL
Match: A0A151U4G2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006889 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.4e-21
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 1

Query: 10  GGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKY 69
           G RRVEIVSGK YG + S     S  + T A++ G+A+A AKPW FGDPE KRRKRIA+Y
Sbjct: 6   GPRRVEIVSGKSYGCNQSHAAAISSEV-TRASQSGAATA-AKPWSFGDPETKRRKRIARY 65

Query: 70  KVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           KVY VEGKVK SLR G++WIK  CSRIVHGY
Sbjct: 66  KVYAVEGKVKASLRNGIRWIKDTCSRIVHGY 94

BLAST of CmaCh01G002970 vs. TrEMBL
Match: I1L7S0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G015200 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.9e-21
Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 1

Query: 10  GGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKY 69
           G RRVEIVSGK YG   S  +   P+  T A+  G+A+AA KPW FG PE +RRKRIAKY
Sbjct: 6   GQRRVEIVSGKSYGCSQS-YMAAIPSEVTRASHSGAATAA-KPWSFGGPESRRRKRIAKY 65

Query: 70  KVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           KVY VEGKVK +LR G++WIK  CSRIVHGY
Sbjct: 66  KVYAVEGKVKATLRDGIRWIKHTCSRIVHGY 94

BLAST of CmaCh01G002970 vs. TrEMBL
Match: I1JBI3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G014500 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 1

Query: 10  GGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKY 69
           G R+VEI+SGK YG   S  +   P+  T A+  G+A+A AKPW FGDPE KRRKRIAKY
Sbjct: 6   GQRQVEIMSGKSYGCSQS-YMAAIPSEVTRASHSGAATA-AKPWSFGDPESKRRKRIAKY 65

Query: 70  KVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
            VY VEGKVK +LR G++WIK  CSRIVHGY
Sbjct: 66  NVYAVEGKVKATLRDGIRWIKHTCSRIVHGY 94

BLAST of CmaCh01G002970 vs. TrEMBL
Match: K7MZK0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G214700 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-20
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 1

Query: 8   HGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIA 67
           +GGGRR+E+VSGK +G   +     SP+         S  A+ KPWRFGDPE KR+KRIA
Sbjct: 11  YGGGRRMEVVSGKSHGWSST----QSPD---------STQASEKPWRFGDPEAKRKKRIA 70

Query: 68  KYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           KYKVY VEGKVK +L+KGL+WIK KCS+I HGY
Sbjct: 71  KYKVYGVEGKVKATLKKGLRWIKKKCSQIAHGY 90

BLAST of CmaCh01G002970 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511))

HSP 1 Score: 80.1 bits (196), Expect = 8.5e-16
Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 1

Query: 14  VEIVSGKRYGGDGSCQIYGS--------PNLATTANRVGSASAAAKPWRFGDPEGKRRKR 73
           ++IV+GK YG  G+ Q+Y +        P++             A PWR  D E KR+KR
Sbjct: 17  MDIVNGKGYGVGGTTQVYSTRPDSPKFQPSIPPPPGSTSKTRTTATPWRLIDAETKRKKR 76

Query: 74  IAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG 100
           IA YK Y +EGKVK +++KG  WIK + S I+HG
Sbjct: 77  IATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

BLAST of CmaCh01G002970 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511))

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-15
Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1

Query: 5   QSAHGGGRRVEIVSGKRYGGDGSCQIYGS----PNLATTANRVGSA-SAAAKPWRFG--- 64
           Q  +G  RR EIVSGKR       QIYG+    P+L     +V +  S A+   R G   
Sbjct: 13  QRTYGVDRRKEIVSGKRN------QIYGTRDYPPSLPPPPGKVAAGRSNASSSLRIGGLS 72

Query: 65  DPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           D E KR+KRIA+YK YTVEGKVK +L+ G +WIK KC +IVH +
Sbjct: 73  DAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHRF 110

BLAST of CmaCh01G002970 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511))

HSP 1 Score: 67.0 bits (162), Expect = 7.5e-12
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1

Query: 42  RVGSASAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHG 100
           R  S S   K W + DPE KR++R+AKYK+Y+ EGK+K +LRK  +WIK +CS+I+HG
Sbjct: 67  RSSSHSTLFKGW-WNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

BLAST of CmaCh01G002970 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511))

HSP 1 Score: 61.2 bits (147), Expect = 4.1e-10
Identity = 24/52 (46.15%), Postives = 39/52 (75.00%), Query Frame = 1

Query: 47  SAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVH 99
           S+++  W F DP+ +R+KR+  Y+ YTVEGK+K S RK  +WIK KC+++++
Sbjct: 65  SSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

BLAST of CmaCh01G002970 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511))

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-09
Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 1

Query: 10  GGRRVEIVSGKRYGGD--GSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIA 69
           GG +++   G + GGD       YG+        +   + A +K W   DPE +R+KR+A
Sbjct: 13  GGMQIQPYHGNQ-GGDFRSYSASYGTRENNIYDVKKEKSIARSKSWGITDPELQRKKRVA 72

Query: 70  KYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
            YK+Y VEGKVK S R   +W+K + +++V+G+
Sbjct: 73  SYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYGW 104

BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|700197681|gb|KGN52839.1| (hypothetical protein Csa_4G002560 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 1.4e-28
Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 1

Query: 12  RRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKYKV 71
           RR+EIVSGK  G   + QIY SPNL T  NRVGSA A  KPW F DPE KRRKRIAKYKV
Sbjct: 4   RRIEIVSGKHNGARAAPQIYRSPNLDTNGNRVGSA-ATGKPWGFADPEAKRRKRIAKYKV 63

Query: 72  YTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           YTVEG+VKDSLRKGL+WIK KCSRIVHG+
Sbjct: 64  YTVEGRVKDSLRKGLRWIKNKCSRIVHGF 91

BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|1012363036|gb|KYP74219.1| (hypothetical protein KK1_006889 [Cajanus cajan])

HSP 1 Score: 109.0 bits (271), Expect = 4.9e-21
Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 1

Query: 10  GGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKY 69
           G RRVEIVSGK YG + S     S  + T A++ G+A+A AKPW FGDPE KRRKRIA+Y
Sbjct: 6   GPRRVEIVSGKSYGCNQSHAAAISSEV-TRASQSGAATA-AKPWSFGDPETKRRKRIARY 65

Query: 70  KVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           KVY VEGKVK SLR G++WIK  CSRIVHGY
Sbjct: 66  KVYAVEGKVKASLRNGIRWIKDTCSRIVHGY 94

BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|947083109|gb|KRH31830.1| (hypothetical protein GLYMA_10G015200 [Glycine max])

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-20
Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 1

Query: 10  GGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKY 69
           G RRVEIVSGK YG   S  +   P+  T A+  G+A+AA KPW FG PE +RRKRIAKY
Sbjct: 6   GQRRVEIVSGKSYGCSQS-YMAAIPSEVTRASHSGAATAA-KPWSFGGPESRRRKRIAKY 65

Query: 70  KVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           KVY VEGKVK +LR G++WIK  CSRIVHGY
Sbjct: 66  KVYAVEGKVKATLRDGIRWIKHTCSRIVHGY 94

BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|947121044|gb|KRH69250.1| (hypothetical protein GLYMA_02G014500 [Glycine max])

HSP 1 Score: 106.7 bits (265), Expect = 2.4e-20
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 1

Query: 10  GGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKY 69
           G R+VEI+SGK YG   S  +   P+  T A+  G+A+A AKPW FGDPE KRRKRIAKY
Sbjct: 6   GQRQVEIMSGKSYGCSQS-YMAAIPSEVTRASHSGAATA-AKPWSFGDPESKRRKRIAKY 65

Query: 70  KVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
            VY VEGKVK +LR G++WIK  CSRIVHGY
Sbjct: 66  NVYAVEGKVKATLRDGIRWIKHTCSRIVHGY 94

BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|571559574|ref|XP_006604736.1| (PREDICTED: uncharacterized protein LOC100807345 [Glycine max])

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-20
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 1

Query: 8   HGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIA 67
           +GGGRR+E+VSGK +G   +     SP+         S  A+ KPWRFGDPE KR+KRIA
Sbjct: 11  YGGGRRMEVVSGKSHGWSST----QSPD---------STQASEKPWRFGDPEAKRKKRIA 70

Query: 68  KYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY 101
           KYKVY VEGKVK +L+KGL+WIK KCS+I HGY
Sbjct: 71  KYKVYGVEGKVKATLKKGLRWIKKKCSQIAHGY 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KV97_CUCSA9.8e-2975.28Uncharacterized protein OS=Cucumis sativus GN=Csa_4G002560 PE=4 SV=1[more]
A0A151U4G2_CAJCA3.4e-2165.93Uncharacterized protein OS=Cajanus cajan GN=KK1_006889 PE=4 SV=1[more]
I1L7S0_SOYBN9.9e-2163.74Uncharacterized protein OS=Glycine max GN=GLYMA_10G015200 PE=4 SV=1[more]
I1JBI3_SOYBN1.7e-2062.64Uncharacterized protein OS=Glycine max GN=GLYMA_02G014500 PE=4 SV=1[more]
K7MZK0_SOYBN2.2e-2059.14Uncharacterized protein OS=Glycine max GN=GLYMA_19G214700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G62640.18.5e-1641.49 Protein of unknown function (DUF3511)[more]
AT2G47480.11.1e-1548.08 Protein of unknown function (DUF3511)[more]
AT3G05725.17.5e-1253.45 Protein of unknown function (DUF3511)[more]
AT2G19460.14.1e-1046.15 Protein of unknown function (DUF3511)[more]
AT5G11970.12.0e-0935.48 Protein of unknown function (DUF3511)[more]
Match NameE-valueIdentityDescription
gi|700197681|gb|KGN52839.1|1.4e-2875.28hypothetical protein Csa_4G002560 [Cucumis sativus][more]
gi|1012363036|gb|KYP74219.1|4.9e-2165.93hypothetical protein KK1_006889 [Cajanus cajan][more]
gi|947083109|gb|KRH31830.1|1.4e-2063.74hypothetical protein GLYMA_10G015200 [Glycine max][more]
gi|947121044|gb|KRH69250.1|2.4e-2062.64hypothetical protein GLYMA_02G014500 [Glycine max][more]
gi|571559574|ref|XP_006604736.1|3.2e-2059.14PREDICTED: uncharacterized protein LOC100807345 [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021899DUF3511
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh01G002970.1CmaCh01G002970.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021899Protein of unknown function DUF3511PFAMPF12023DUF3511coord: 55..99
score: 1.2
NoneNo IPR availablePANTHERPTHR33193FAMILY NOT NAMEDcoord: 12..100
score: 1.1
NoneNo IPR availablePANTHERPTHR33193:SF1SUBFAMILY NOT NAMEDcoord: 12..100
score: 1.1

The following gene(s) are paralogous to this gene:

None