CmaCh01G002970 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCCATTTCCAATCGGCCCACGGCGGCGGACGAAGGGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTGCGAACCGAGTTGGGTCGGCATCAGCGGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGGAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGCCTACAGTGGATTAAGACTAAATGCTCCCGGATTGTCCATGGATATTGA ATGGCCCATTTCCAATCGGCCCACGGCGGCGGACGAAGGGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTGCGAACCGAGTTGGGTCGGCATCAGCGGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGGAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGCCTACAGTGGATTAAGACTAAATGCTCCCGGATTGTCCATGGATATTGA ATGGCCCATTTCCAATCGGCCCACGGCGGCGGACGAAGGGTCGAGATTGTCAGCGGCAAACGCTACGGAGGAGACGGCAGCTGTCAGATCTACGGCTCGCCGAATCTGGCTACAACTGCGAACCGAGTTGGGTCGGCATCAGCGGCGGCGAAACCGTGGCGGTTCGGCGACCCGGAGGGGAAACGGAGGAAGAGGATCGCCAAGTATAAAGTTTATACGGTCGAAGGGAAGGTGAAGGATTCGCTGCGGAAGGGCCTACAGTGGATTAAGACTAAATGCTCCCGGATTGTCCATGGATATTGA MAHFQSAHGGGRRVEIVSGKRYGGDGSCQIYGSPNLATTANRVGSASAAAKPWRFGDPEGKRRKRIAKYKVYTVEGKVKDSLRKGLQWIKTKCSRIVHGY
BLAST of CmaCh01G002970 vs. TrEMBL
Match: A0A0A0KV97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G002560 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 9.8e-29 Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TrEMBL
Match: A0A151U4G2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006889 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.4e-21 Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TrEMBL
Match: I1L7S0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G015200 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 9.9e-21 Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TrEMBL
Match: I1JBI3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G014500 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.7e-20 Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TrEMBL
Match: K7MZK0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G214700 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.2e-20 Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511)) HSP 1 Score: 80.1 bits (196), Expect = 8.5e-16 Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511)) HSP 1 Score: 79.7 bits (195), Expect = 1.1e-15 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511)) HSP 1 Score: 67.0 bits (162), Expect = 7.5e-12 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511)) HSP 1 Score: 61.2 bits (147), Expect = 4.1e-10 Identity = 24/52 (46.15%), Postives = 39/52 (75.00%), Query Frame = 1
BLAST of CmaCh01G002970 vs. TAIR10
Match: AT5G11970.1 (AT5G11970.1 Protein of unknown function (DUF3511)) HSP 1 Score: 58.9 bits (141), Expect = 2.0e-09 Identity = 33/93 (35.48%), Postives = 53/93 (56.99%), Query Frame = 1
BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|700197681|gb|KGN52839.1| (hypothetical protein Csa_4G002560 [Cucumis sativus]) HSP 1 Score: 134.0 bits (336), Expect = 1.4e-28 Identity = 67/89 (75.28%), Postives = 72/89 (80.90%), Query Frame = 1
BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|1012363036|gb|KYP74219.1| (hypothetical protein KK1_006889 [Cajanus cajan]) HSP 1 Score: 109.0 bits (271), Expect = 4.9e-21 Identity = 60/91 (65.93%), Postives = 69/91 (75.82%), Query Frame = 1
BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|947083109|gb|KRH31830.1| (hypothetical protein GLYMA_10G015200 [Glycine max]) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-20 Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 1
BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|947121044|gb|KRH69250.1| (hypothetical protein GLYMA_02G014500 [Glycine max]) HSP 1 Score: 106.7 bits (265), Expect = 2.4e-20 Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 1
BLAST of CmaCh01G002970 vs. NCBI nr
Match: gi|571559574|ref|XP_006604736.1| (PREDICTED: uncharacterized protein LOC100807345 [Glycine max]) HSP 1 Score: 106.3 bits (264), Expect = 3.2e-20 Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |