CmaCh01G001700 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCAAGGGAGGTGGGGGAGATGAAGGAGGTGGAGATGGAGTATCAGGTGAAGCCAAAGGTGGCTGCTGATAAACTGGAGGAGATGGCTGCTGATAAACTGGAGGAGATGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAGGGGGCTGGCTGGTGCTGATAAACTGGAGGAGGGGAAGAAACTAAAGGGGGCAGAGAAGGCCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGGAGATTGGGAAAGGCCACTGGCCACAGGTTCCAAACAAGTATCGGTAAAAAGGATCACAGTTGGATCCTCTGCTTCTGGGTTTGCTTCTGCTTCTGCTTCTGGGTTTGCTTCTCTTTTCTTCATCTTTCCACCCTTTTTTTTCATGTTGATTCTGCTTTTGTTCAGTATCTGCTTCTACAGGTACTTGTTGAGAGATCAGCAGCAGAGCTAAAAGTGCTGCTATCACTACGGTAAGCTTCATTTATGTTTCTTCGGTAATAATCTTGTATGCATTCTGGTGATGTTATATGTTCCAAGTAGAAAAAGGGGCTTATATAGAATAGAATAGAATAGCCTGGTTTGTTTTGTTTCGACCATGGCATGCCTTGAAGTTCGCAATTACAACGTTGATTTCTATACCATTTATGTTTTGACTTCTTGAGTTTCAAAACAGCACAACTCTGATATTTATTAATGCTGCAGCAGCACAGTGAATTAATAGACATGGCTCACAATAGTCACTGCTTGCTACCTTCAAAATTGCGACTTCCAATGCTAATTTATGCAAGTATTCTCTCTCTGAGTAGTTGAATGTTGAAGCCAAAAATTTATGGATAAAATACATTTTTATTTTTGGTGTATTTGAATTTGATTCCAGTTGTTTCCTACGGTTTGAAATTAATTTTTAATTGGTCTCTAGAATTTGAAATTAGTTTCTAGTTTATGAAAGATAAAAATTTTCTTTCATTTTCAGTTTAGATTGGTCCTTAGAATTAGAATTAGAATTTGAATTCTAATTTTCTTTCGTTTTCAATTTACATGAACAAACTTGAATAAATCACAAACTAACGATTAATCCTATGACAGATCATAGAAAACGACGATACCTTGCTTGAAAATCTGTCCTCTAAGAACCTCCTCTGCAAATACTCCATGTCCTCTGCCTTCTCAAGCTGGCTGTGCAGCTATGGCGCCAAGTCTAAGCTCGTCAGAATTGTCCATCCCAGCGGTCACATAGAGCTCCACGACAGTCCCATCTGGGCGGCGGAGATCATGCTCCGAAACCCTGAATTCTCCCTCACTCACTCCCAATCAGCTAATCATCCATGGGCCATTGTCTCACCGGACACGACGCTCATGCTGTGCTGCAAATACGACCTCTTACCGGAAAACAGCGTGGGAAACCCCCAGAAGATGAAGGAAAATGAAGGTTTGGAATCGGATTGTTTGAATGACGGAAAGTGTATGATGTGTTTTGTTCCAAAGGAAAAGGGCGAGAGAACTGTGAGGTGGGAAAGTGGTGATGATTTGAAGGGGAATGATAAAAGAGGGATATTTTTGCAAAATGGGAACATTAGAGGGTCTCCCAAGAGACCATTCGGGTCATCTGATAATTGGGAACCAAATTTGAATAGCATCTCTGAAGAATATTAGAAGTTTGTATTTTGTTTTCCTAGGATTGGATCGAGTTTGGTTAGTTTATTATAATGATGAATCCATAGTTGGTCGATTATGTTAATATGA ATGGAACCAAGGGAGGTGGGGGAGATGAAGGAGGTGGAGATGGAGTATCAGGTGAAGCCAAAGGTGGCTGCTGATAAACTGGAGGAGATGGCTGCTGATAAACTGGAGGAGATGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAGGGGGCTGGCTGGTGCTGATAAACTGGAGGAGGGGAAGAAACTAAAGGGGGCAGAGAAGGCCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGGAGATTGGGAAAGGCCACTGGCCACAGGTTCCAAACAAGTATCGGTAAAAAGGATCACAGTTGGATCCTCTGCTTCTGGGTTTGCTTCTGCTTCTGCTTCTGGATCAGCAGCAGAGCTAAAAGTGCTGCTATCACTACGATCATAGAAAACGACGATACCTTGCTTGAAAATCTGTCCTCTAAGAACCTCCTCTGCAAATACTCCATGTCCTCTGCCTTCTCAAGCTGGCTGTGCAGCTATGGCGCCAAGTCTAAGCTCGTCAGAATTGTCCATCCCAGCGGTCACATAGAGCTCCACGACAGTCCCATCTGGGCGGCGGAGATCATGCTCCGAAACCCTGAATTCTCCCTCACTCACTCCCAATCAGCTAATCATCCATGGGCCATTGTCTCACCGGACACGACGCTCATGCTGTGCTGCAAATACGACCTCTTACCGGAAAACAGCGTGGGAAACCCCCAGAAGATGAAGGAAAATGAAGGTTTGGAATCGGATTGTTTGAATGACGGAAAGTGTATGATGTGTTTTGTTCCAAAGGAAAAGGGCGAGAGAACTGTGAGGTGGGAAAGTGGTGATGATTTGAAGGGGAATGATAAAAGAGGGATATTTTTGCAAAATGGGAACATTAGAGGGTCTCCCAAGAGACCATTCGGGTCATCTGATAATTGGGAACCAAATTTGAATAGCATCTCTGAAGAATATTAGAAGTTTGTATTTTGTTTTCCTAGGATTGGATCGAGTTTGGTTAGTTTATTATAATGATGAATCCATAGTTGGTCGATTATGTTAATATGA ATGGAACCAAGGGAGGTGGGGGAGATGAAGGAGGTGGAGATGGAGTATCAGGTGAAGCCAAAGGTGGCTGCTGATAAACTGGAGGAGATGGCTGCTGATAAACTGGAGGAGATGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGCTGGCTGCTGATAAACTGGAGGAGGGGAAGAAACTAAGGGGGCTGGCTGGTGCTGATAAACTGGAGGAGGGGAAGAAACTAAAGGGGGCAGAGAAGGCCTTGAGGGTGACAAAAATGGGTTATCTGAAGGGGAGATTGGGAAAGGCCACTGGCCACAGGTTCCAAACAAGTATCGGTAAAAAGGATCACAGTTGGATCCTCTGCTTCTGGGTTTGCTTCTGCTTCTGCTTCTGGATCAGCAGCAGAGCTAAAAGTGCTGCTATCACTACGATCATAGAAAACGACGATACCTTGCTTGAAAATCTGTCCTCTAAGAACCTCCTCTGCAAATACTCCATGTCCTCTGCCTTCTCAAGCTGGCTGTGCAGCTATGGCGCCAAGTCTAAGCTCGTCAGAATTGTCCATCCCAGCGGTCACATAGAGCTCCACGACAGTCCCATCTGGGCGGCGGAGATCATGCTCCGAAACCCTGAATTCTCCCTCACTCACTCCCAATCAGCTAATCATCCATGGGCCATTGTCTCACCGGACACGACGCTCATGCTGTGCTGCAAATACGACCTCTTACCGGAAAACAGCGTGGGAAACCCCCAGAAGATGAAGGAAAATGAAGGTTTGGAATCGGATTGTTTGAATGACGGAAAGTGTATGATGTGTTTTGTTCCAAAGGAAAAGGGCGAGAGAACTGTGAGGTGGGAAAGTGGTGATGATTTGAAGGGGAATGATAAAAGAGGGATATTTTTGCAAAATGGGAACATTAGAGGGTCTCCCAAGAGACCATTCGGGTCATCTGATAATTGGGAACCAAATTTGAATAGCATCTCTGAAGAATATTAG MEPREVGEMKEVEMEYQVKPKVAADKLEEMAADKLEEMAADKLEELAADKLEELAADKLEEGKKLRGLAGADKLEEGKKLKGAEKALRVTKMGYLKGRLGKATGHRFQTSIGKKDHSWILCFWVCFCFCFWISSRAKSAAITTIIENDDTLLENLSSKNLLCKYSMSSAFSSWLCSYGAKSKLVRIVHPSGHIELHDSPIWAAEIMLRNPEFSLTHSQSANHPWAIVSPDTTLMLCCKYDLLPENSVGNPQKMKENEGLESDCLNDGKCMMCFVPKEKGERTVRWESGDDLKGNDKRGIFLQNGNIRGSPKRPFGSSDNWEPNLNSISEEY
BLAST of CmaCh01G001700 vs. TrEMBL
Match: A0A067E3X2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047773mg PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.5e-20 Identity = 72/202 (35.64%), Postives = 102/202 (50.50%), Query Frame = 1
BLAST of CmaCh01G001700 vs. TrEMBL
Match: V4SUE8_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10027378mg PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 6.8e-18 Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 1
BLAST of CmaCh01G001700 vs. TrEMBL
Match: M5XHL0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021098mg PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.3e-16 Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 1
BLAST of CmaCh01G001700 vs. TrEMBL
Match: A0A162AVW5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007440 PE=4 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 9.2e-15 Identity = 63/199 (31.66%), Postives = 88/199 (44.22%), Query Frame = 1
BLAST of CmaCh01G001700 vs. TrEMBL
Match: W9RBX5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025698 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14 Identity = 69/212 (32.55%), Postives = 95/212 (44.81%), Query Frame = 1
BLAST of CmaCh01G001700 vs. NCBI nr
Match: gi|985429972|ref|XP_015385321.1| (PREDICTED: uncharacterized protein LOC107176842 [Citrus sinensis]) HSP 1 Score: 107.8 bits (268), Expect = 3.6e-20 Identity = 72/202 (35.64%), Postives = 102/202 (50.50%), Query Frame = 1
BLAST of CmaCh01G001700 vs. NCBI nr
Match: gi|1021562146|ref|XP_016172248.1| (PREDICTED: uncharacterized protein LOC107614620 [Arachis ipaensis]) HSP 1 Score: 100.9 bits (250), Expect = 4.4e-18 Identity = 65/208 (31.25%), Postives = 99/208 (47.60%), Query Frame = 1
BLAST of CmaCh01G001700 vs. NCBI nr
Match: gi|567869839|ref|XP_006427541.1| (hypothetical protein CICLE_v10027378mg, partial [Citrus clementina]) HSP 1 Score: 99.8 bits (247), Expect = 9.8e-18 Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 1
BLAST of CmaCh01G001700 vs. NCBI nr
Match: gi|731403215|ref|XP_010654968.1| (PREDICTED: uncharacterized protein LOC104880332 [Vitis vinifera]) HSP 1 Score: 98.2 bits (243), Expect = 2.8e-17 Identity = 42/85 (49.41%), Postives = 59/85 (69.41%), Query Frame = 1
BLAST of CmaCh01G001700 vs. NCBI nr
Match: gi|645245212|ref|XP_008228773.1| (PREDICTED: uncharacterized protein LOC103328160 [Prunus mume]) HSP 1 Score: 97.1 bits (240), Expect = 6.3e-17 Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |