CmaCh00G005990 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh00G005990
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionChloroplast envelope membrane protein
LocationCma_Chr00 : 43317611 .. 43323584 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTATCCCCTAGACCCTATTGAAGAAGGTTCTGTTACTAACATGTTGACTTCCATTGTGGTTAATGTATTTGGATTCAAGGCTCTGCGTGCTCTACATCTGTTTGCGAACCCTACTGCTTATATTCAAACTTTCCAAGGCCCGCCTCATGGTATTCAGGTTGAAAGAGAGAAATTGAAGAAGTATGGTCGCCCTCTATTGGGATGTACTATGTAAACCAAAATGGGGATTATCCGCTAAGAATTATGGTAGAGTCATTCATGAATGTCTACGCGGTGGACTTGATTTTACCAAAGATGATGAAAAGGTTCATTCCCAACCATTTATGCATTGTAGAGACCGTTTCCTATTTTGTGCGGAATTTCTCAATCACAGGCTGAAGTGAAATCAAGGGACATTACTTGAATGCTACTATGCGAGTACATGCGAAGAAATGATGAAAGGGCTTTGCTTGAGAATTGGGAGTTATTCTTTCACGAACTGTAAACAAAGAGAAATACTCCTTATTCATGAGAGTGAACTCCGGAACCTTCTCGAACTCGGGTTGAACTTACAGTCTCTTCTCTTTTCTTTTCTTTGATTCTGCTTTCAAGACTCTTCAAATTCAAGATTCATTCCCCATCACTTCTATTCCCTTCTGTTATGGTGAGTTATTCTTGTTAACAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTCATTATTGTCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAAAGCATGCCGTTATTCATAGAAGAGTCATGGTATGCGCTTCCCTTCCGTGTACTAGCTAATGCGTTACGTCTGTCTGGTGGAGACCATATTCACGCTGGTACCGTAGTAGGTAAACTTGAAGAATGGGAAAGAGACATTTAGGCTTTGTTGATTTAGTGATGATTTTGTTGAAAAAGATCGAACGGTATTTATTTCACTCAAGATTGGGTCTCTTTACCAGGTGTTCTGCCAGTGGCTTCCGGTGGTATTCACGTTTGGCATATGCCTGCTCTAACCGAGATGGAGATGATTCCGTACTAGACTCCAATTCGGCGGAGGAACTTTGGGGCTGGGGGGAATGCACCAAGTGCCATAGCTAACCGAGTAGCTCTTGAAGCATGTGTACATGCTCGTAATCAGAGCCGTGATCTTGCTCATGAGGGTAGGTAATGAAATTATCCATGAGGCTAGTAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAGGCGATCAAATTCTAATTTGAGTAGAGACTTTGTAATCCAGGAATTACTCTTCGTTCTTTTAATTGACTTTAAATTAAACAAAACTCGGCCCCCTACCTAATCTTTTACTAAAAGGATTGAGCCGAATACAATACAAAGATACTATTGTATAGCTTTTTGCTAGATATACTCCAAATGGAAATCAAAATCTTAGACGAAACAACGTAAACATTTTTGTTGTTGTGTCAGATCATCCGCAATTAAGTCTATGGATCCTTAGAATTGGTGTAGTCGTTTAATATCTCCCGTAGTGTCGTTTCAGATCATGGATCGAGCCAAGTACCACAACTTCTTCTACCCATCCTGTATATTGTCCTTTTTGTTCTGTCTTGGAATACCAATTTGTTAGGAACCGAGATTTGACGAAAAAAGTTCTTCATATGAATAGGGGGAACAACCCTTCTTTTTTAAGACCCACTCGTTAGTAATAATCTGAGTGATTGGATTTTGATCCTATTCCTTATAGGAAATGAGATATTCAAATGATTGATTTTTTATCGAATGACTATGAATCTATTGTATTTTGATGGAAATAGGTAGGGGCAAGAAAACTCTATGGAAAAAAGATGGTGAAATTCGAGGTTGTCTAACGGGGAGTTAGAATACAGGTCTAAGCTAAGTAAATCAATCAATAGTTTTGGTCCTATTGAAAGTAAAGGATCAATAATAATATGAATCAAAACATTCCTAGTCATAGTGACAATTCTAGTTACAGTACCGTTGATGATTTAGTCGGCCGACATTCGGTCGGATCTGATGACACTTTTTTAGTTAGGGATAGTAATAGCAGCAGTTATTCCATTTGGATAGTGAAAATCTATACTGCTTGAGATTGACAATGATCCTTCTTTTGTAAGTGAACTAGAAAGTTCTAGTTTACGGAACTCTACTTAAAATCTATCTAAGAGTAATGAGAGAGACTATGATCGTTACATGGATGATACTAAATATATATAGTTTAGTTGGAATAATCACATTAATAGTTGCATTGACAGTTATCTTCGGGCTTAAATCCGTATTGATAGTAACTTTTTAAGTGGTAGTCACAATTAGAGTGACAGTTACGTTTATAGTGACATTTGTGGTTCAGGTGCAAATAGTAGTGAAAGTGAGAGTTCCAGTATAAGAACTAGCACGAATGGAAGTGATTTAACTAGAACGGAGAGTTCTACGGAAAGTTCTAATGATCTAGATGGAACTCAAACAGGCATTTGTGGGTTCAATGCGCAAATTGTTATGGATTCAATTATAAGAAGGATTTGAAATCAAAAATGAATATTTGTGAACAATGTGGATACCATTTGAAAATGAGTAGTTTAGATAGAATCGAACTTTTGATTGATCCAGCCAGGTACTTTGGACCCTATGGATGAAGACATGGTCTCTTTGGATCTGATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACATGATTAACTAAGGCACAGGTAAATGAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTCCGTTTATGGGGGTGGGATCTGTAGTAGGCGAGAGAATCACCCGTTTGATCGAGTATGCTACAAATCAATCAATTTTGACCTCTGATTTGAGTGTGTGCTTCTGGAGGAGCACACATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTATCAATCCTTACATCTCCTACTACTAGTGGGGTGACAGGTAGTTTTGGTATCTTGGGGGATATCATTATTTGTGGGTAAAAGAGTAATTTCTTGAACATTGATTGAATACGACAGTCCGAAGGGTTCCCAGGTGGCTGACGTTCGATAAGGGCTTATTCGATCTAAACCACGTAATCCTTTAAAAGGTGTTTGAGTGAGTTATTTCAGCTCCATGCTTTAGTTCCCTCGAATCAAAATTCAATCAAGTCAAACCTTACTTAAAACTCTTCCAAAATTCATTCTCAGTATTTGTAACGAACAAGTAGTTATTTAGTTTATAGGAATCAAAGTCAAAATTCGCACAATGGATTTTTCTTTGGTAACATAAGATGAAATTGTAGAAAGAATCATGCGGAGAAATGGGTTTGACCGATATTCCTCATTAGTAATGAGGAAGCCCCTATTAAATAAAAGAGCAAATTCTTTCTTCCGCTAAATTAAGCGGGAATAAAATGCATGAATTTCATGCTCCCTTCTTACATTACATGTGGATATATAATCCAACTATAGCAAATAGCGGCATAGAGTCTTGCATCTTTCTACATCTCTAGAGGATCTCTAGTTTGACTACGAATCCCTGTTGTTGGATCGGATTATAACAAACTTTTGGGTAACAAGTAGATATTACTTAGTGGAATTCTATATGAATTAATATAATTATCAGATACCTTTTATAAAAATAAATAAATAACAGGTAAATTAATATAACAAGAAATAACAGGTACAAATATTAAGTCAAGGTATCCATTCTATGACAAACTTACCCTCTCTCTACTTTTGTGCCTTTAGTAGGCCTAGTATTTCTGGCAATTGCAATGGCTTCTTTATCTCTTCATGTTCAAAAAAACAAGATTATTTATGCTACATGTCTATTTGTTTTTTTCAAAACTTAGACTTTGACGATAACACAGCTATCTATTTAGTAGACGACAGTCTAATATGTGGCTGACTCCAAACATAAGCGATTATACATGCGTAAACATGATATCTGAGAAAATGAATTAGAAAGTCTTTGAAAATCTCCAATATATAATAGATCGGGCGACGAATGGTTGAGATGTCAAATCAATATATCTATATGGATGTAGGTATCCATAGGGAATCACATAAAGGTGATGTTATTATTTGAGATCTAAGTAATTCGATGAGTTACTCCGTCAGTCAAGGTTCACATTAAAATAGTGCTAGTTGATTAGAGTTACTTTGGAAACAAAAAAAGTCAAATATCCGCGTTATTCTATCAATTCCAATAAAATGCAACGAGATCTAGTATGAGTTGGTGATCAGAACTTATATGGATAGAATTTATAAGAAAGAGGATCTCAAAAGCAATTTCCGCTGGGCCTTTATCTATCCCCTTTTTTTAGGTTCATTAGGGTGTTGGTTGGAACTTCCAGTTATCTTGCTTGGTAGGGATTTGATATCTTGATTTCCGTCTCAGCAAAGAATTTCTTTGTTTTCCACAGGGGATCGTAATGTCTTTCTATGGGATTGTAGGTCTCTTTACAAGTCTCTTTATTAGCTCCTATTTGTGGTGCACCATTTTGTGGAATGTAGGTAGCGGTTATGATCGATTCGATAGAAAAGAAGGAATAGTGTCTATTTTGGGGGGTTTCCTGGACAAAATCCTAGAATCTTCCTCCGATTCCTTATGAAAGACATTCAGTCCATCAGAATAGAAGTGAAAGAGGGTATTTATGCACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCCTTGACTCGTACCGATCAGAATCTGACCCACCCCACGAGAGAGAAATTCTCAATTGAGCAAAAGGCTGCCGAATTGGCTGGCCTATTTCTTGCGTGTACCAATTTCAGTTTCCTTGAGGAAGTTCAGAATGAATGCTTTCTTAGTTCGTAGCAAGAGGGATAAAACGGAAAAGAAAGAATAGTCTTTTTTATAGACCCTAGTATAACTTAACGGGAATTGATGAAGAATGCTCATTCATTTGAGCCAAAGCAGACGTATAGGGAACAGACGGAAAACTGTCTTTCTTTGTCCGAAATTATGATGCGTATGTAACTCCACAGTAACAAAAGTGGATTCTTTGATATTTGCTTTCTGTATTATTTCGAAATTCAAGGATTAACTAATGAACAGGGAATGGATTCATAATAGTATCCATATAACTTTACATAGAACTTATGTTTGATATAAATATTAGTAGTGTAGAGAGGTAACGAATGAAGTGAGTTCATTAACAAATGAAAGACGAATGGCAAACAAGAAAGCATTCATTCCCCTTCTATATCTTGCATCTATAGTCTTTTTGCCCTGGTGGATCTCTATTTAATAAAAGCCTCGAATCTTGGGTTACTCATTGGTGGAATACTGGTCAATCCGAAATGTTGTTGAATTAGATGAAAGAAAAGATTATTATAACAAAAGTGAGAGAATTAGAGGAACTCTTTCCCTTGGACGAAATGTTAAAGGAATACCCAGAAAGACATCTATCTACAAAAGCTTCGTATCGGAATCTACAAAGAAAGGAAAGGATCCATCCAATTGATCAAGATGCACAATGAATGAGGATCGTATCCATACGATTTTGCACTTCTCGACAAATAGAATCCGTTTCATTATTCTAAGTGGTTATTCTCTATTCTTGGTAATTAAGAACTTGTTATTCTTCACTCTTGGGTTCACGAGTTCCTATATAATTTAAGCGACACAATCAAAGCTTTTTCTATTCTTTTATTAACTGATTTATGTTAAGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCGGTCTTGTTTCCACTTTGCCGGTCATTCTGGACACAGCAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGAT

mRNA sequence

CTTATCCCCTAGACCCTATTGAAGAAGGTTCTGTTACTAACATGTTGACTTCCATTGTGGTTAATGTATTTGGATTCAAGGCTCTGCGTGCTCTACATCTGTTTGCGAACCCTACTGCTTATATTCAAACTTTCCAAGGCCCGCCTCATGGTATTCAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTCATTATTGTCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAAAGCATGCCGTTATTCATAGAAGAGTCATGACTCCAATTCGGCGGAGGAACTTTGGGGCTGGGGGGAATGCACCAAGTGCCATAGCTAACCGAGTAGCTCTTGAAGCATGTGTACATGCTCGTAATCAGAGCCGTGATCTTGCTCATGAGGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCGGTCTTGTTTCCACTTTGCCGGTCATTCTGGACACAGCAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGAT

Coding sequence (CDS)

ATGTTGACTTCCATTGTGGTTAATGTATTTGGATTCAAGGCTCTGCGTGCTCTACATCTGTTTGCGAACCCTACTGCTTATATTCAAACTTTCCAAGGCCCGCCTCATGGTATTCAGGTGGATTCACTGCAAATACTAGCTTGGCTCATTCATTATTGTCGAGATAATGGTCTACTTCTTCACATTCACCGTGCAAAGCATGCCGTTATTCATAGAAGAGTCATGACTCCAATTCGGCGGAGGAACTTTGGGGCTGGGGGGAATGCACCAAGTGCCATAGCTAACCGAGTAGCTCTTGAAGCATGTGTACATGCTCGTAATCAGAGCCGTGATCTTGCTCATGAGGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATGATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCGGTCTTGTTTCCACTTTGCCGGTCATTCTGGACACAGCAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGAT

Protein sequence

MLTSIVVNVFGFKALRALHLFANPTAYIQTFQGPPHGIQVDSLQILAWLIHYCRDNGLLLHIHRAKHAVIHRRVMTPIRRRNFGAGGNAPSAIANRVALEACVHARNQSRDLAHEGIGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDTANIGSLFKSSISVTCSD
Homology
[Close]
BLAST of CmaCh00G005990 vs. Swiss-Prot
Match: CEMA_AMBTC (Chloroplast envelope membrane protein OS=Amborella trichopoda GN=cemA PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.4e-17
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. Swiss-Prot
Match: CEMA_MANES (Chloroplast envelope membrane protein OS=Manihot esculenta GN=cemA PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.7e-17
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGF+HNDQI+SGLVST PVILDT
Sbjct: 164 IGFHSPHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDT 205

[Close]
BLAST of CmaCh00G005990 vs. Swiss-Prot
Match: CEMA_VITVI (Chloroplast envelope membrane protein OS=Vitis vinifera GN=cemA PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.7e-17
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGF+HNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. Swiss-Prot
Match: CEMA_LIRTU (Chloroplast envelope membrane protein OS=Liriodendron tulipifera GN=cemA PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.7e-17
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGF+HNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. Swiss-Prot
Match: CEMA_BUXMI (Chloroplast envelope membrane protein OS=Buxus microphylla GN=cemA PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.7e-17
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGF+HNDQI+SGLVST PVILDT
Sbjct: 159 IGFHSPHGWELMIGSVYKDFGFAHNDQIISGLVSTFPVILDT 200

[Close]
BLAST of CmaCh00G005990 vs. TrEMBL
Match: A0A0S2IGI7_9ROSI (CemA OS=Cucurbita okeechobeensis GN=cemA PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. TrEMBL
Match: A0A0S2IF82_9ROSI (CemA OS=Cucurbita lundelliana GN=cemA PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. TrEMBL
Match: A0A0S2IFA7_9ROSI (CemA OS=Cucurbita cordata GN=cemA PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. TrEMBL
Match: A0A0S2IGQ0_CUCPE (CemA OS=Cucurbita pepo subsp. ovifera GN=cemA PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. TrEMBL
Match: D3WBW2_9MAGN (envelope membrane protein, chloroplastic OS=Meliosma aff. cuneifolia Moore 333 GN=cemA PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. TAIR10
Match: ATCG00530.1 (ATCG00530.1 CemA-like proton extrusion protein-related)

HSP 1 Score: 81.6 bits (200), Expect = 5.1e-16
Identity = 36/42 (85.71%), Postives = 39/42 (92.86%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIG +YKDFGF+H +QILSGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGYIYKDFGFAHYEQILSGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. TAIR10
Match: ATCG00490.1 (ATCG00490.1 ribulose-bisphosphate carboxylases)

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-08
Identity = 30/43 (69.77%), Postives = 32/43 (74.42%), Query Frame = 1 

Query: 1   MLTSIVVNVFGFKALRALHL--FANPTAYIQTFQGPPHGIQVD 42
           M TSIV NVFGFKAL AL L     P AY +TFQGPPHGIQV+
Sbjct: 116 MFTSIVGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVE 158

[Close]
BLAST of CmaCh00G005990 vs. NCBI nr
Match: gi|952954755|gb|ALO22113.1| (cemA (plastid) [Cucurbita ficifolia])

HSP 1 Score: 89.4 bits (220), Expect = 7.0e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. NCBI nr
Match: gi|34500926|ref|NP_904111.1| (envelope membrane protein [Amborella trichopoda])

HSP 1 Score: 89.4 bits (220), Expect = 7.0e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. NCBI nr
Match: gi|595645300|gb|AHM88762.1| (chloroplast envelope membrane protein, partial (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 89.4 bits (220), Expect = 7.0e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. NCBI nr
Match: gi|346578203|ref|YP_004841795.1| (chloroplast envelope membrane protein [Cucumis melo subsp. melo])

HSP 1 Score: 89.4 bits (220), Expect = 7.0e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

[Close]
BLAST of CmaCh00G005990 vs. NCBI nr
Match: gi|952954800|gb|ALO22157.1| (cemA (plastid) [Cucurbita foetidissima])

HSP 1 Score: 89.4 bits (220), Expect = 7.0e-15
Identity = 40/42 (95.24%), Postives = 41/42 (97.62%), Query Frame = 1 

Query: 117 IGFHSPHGWELMIGSVYKDFGFSHNDQILSGLVSTLPVILDT 159
           IGFHSPHGWELMIGSVYKDFGFSHNDQI+SGLVST PVILDT
Sbjct: 162 IGFHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDT 203

The following BLAST results are available for this feature:
BLAST of CmaCh00G005990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CEMA_AMBTC4.4e-1795.24Chloroplast envelope membrane protein OS=Amborella trichopoda GN=cemA PE=3 SV=1[more]
CEMA_MANES9.7e-1792.86Chloroplast envelope membrane protein OS=Manihot esculenta GN=cemA PE=3 SV=1[more]
CEMA_VITVI9.7e-1792.86Chloroplast envelope membrane protein OS=Vitis vinifera GN=cemA PE=3 SV=1[more]
CEMA_LIRTU9.7e-1792.86Chloroplast envelope membrane protein OS=Liriodendron tulipifera GN=cemA PE=3 SV... [more]
CEMA_BUXMI9.7e-1792.86Chloroplast envelope membrane protein OS=Buxus microphylla GN=cemA PE=3 SV=1[more]
BLAST of CmaCh00G005990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S2IGI7_9ROSI4.9e-1595.24CemA OS=Cucurbita okeechobeensis GN=cemA PE=3 SV=1[more]
A0A0S2IF82_9ROSI4.9e-1595.24CemA OS=Cucurbita lundelliana GN=cemA PE=3 SV=1[more]
A0A0S2IFA7_9ROSI4.9e-1595.24CemA OS=Cucurbita cordata GN=cemA PE=3 SV=1[more]
A0A0S2IGQ0_CUCPE4.9e-1595.24CemA OS=Cucurbita pepo subsp. ovifera GN=cemA PE=3 SV=1[more]
D3WBW2_9MAGN4.9e-1595.24envelope membrane protein, chloroplastic OS=Meliosma aff. cuneifolia Moore 333 G... [more]
BLAST of CmaCh00G005990 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00530.15.1e-1685.71ATCG00530.1 CemA-like proton extrusion protein-related[more]
ATCG00490.11.4e-0869.77ATCG00490.1 ribulose-bisphosphate carboxylases[more]
BLAST of CmaCh00G005990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|952954755|gb|ALO22113.1|7.0e-1595.24cemA (plastid) [Cucurbita ficifolia][more]
gi|34500926|ref|NP_904111.1|7.0e-1595.24envelope membrane protein [Amborella trichopoda][more]
gi|595645300|gb|AHM88762.1|7.0e-1595.24chloroplast envelope membrane protein, partial (chloroplast) [Lagenaria sicerari... [more]
gi|346578203|ref|YP_004841795.1|7.0e-1595.24chloroplast envelope membrane protein [Cucumis melo subsp. melo][more]
gi|952954800|gb|ALO22157.1|7.0e-1595.24cemA (plastid) [Cucurbita foetidissima][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000685RuBisCO_lsu_C
IPR004282CemA
IPR017443RuBisCO_lsu_fd_N
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0016984ribulose-bisphosphate carboxylase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0015977carbon fixation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015977 carbon fixation
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:1902600 hydrogen ion transmembrane transport
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0009573 chloroplast ribulose bisphosphate carboxylase complex
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0016984 ribulose-bisphosphate carboxylase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G005990.1CmaCh00G005990.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalGENE3DG3DSA:3.20.20.110coord: 86..116
score: 9.9E-7coord: 48..73
score: 1.
IPR000685Ribulose bisphosphate carboxylase, large subunit, C-terminalunknownSSF51649RuBisCo, C-terminal domaincoord: 43..118
score: 1.4
IPR004282Chloroplast envelope membrane protein, CemAPFAMPF03040CemAcoord: 117..158
score: 1.1
IPR017443Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminalGENE3DG3DSA:3.30.70.150coord: 1..31
score: 4.
NoneNo IPR availablePANTHERPTHR33650FAMILY NOT NAMEDcoord: 117..158
score: 3.5
NoneNo IPR availablePANTHERPTHR33650:SF2CHLOROPLAST ENVELOPE MEMBRANE PROTEINcoord: 117..158
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G005990Cucurbita maxima (Rimu)cmacmaB023
CmaCh00G005990Cucurbita moschata (Rifu)cmacmoB026
CmaCh00G005990Melon (DHL92) v3.5.1cmameB009
CmaCh00G005990Watermelon (Charleston Gray)cmawcgB006
CmaCh00G005990Cucurbita pepo (Zucchini)cmacpeB014