CmaCh00G005930 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh00G005930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Polygalacturonase
Location	Cma_Chr00 : 42964298 .. 42965526 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCAGATGCATGGAAGGAAGCATGTGCGTCGGCTACTCCAAGTAAAGTATTGGTTCCAAAAGGAACTTATCAATTAGGAGAATCCAGGCTCAAAGGTCCATGTAAAAGTCCTATCGAGCTTCTAGTTGAAGGAACATTACAAGCTTCTCCTACCGACACGGAAGGAGATGGGTTGCTTGTTATGGAATACGTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTGGTTGGGAAAAGAATGATTGCCACCTGAAGAAAGAATGCAAAAAGCTTCCCATGGTAAATGCTCGTACTACTTTAATTATAAAAAGAACTCATAATTTGGGTTAGCATTATATGCTTTAACAAGCGAGTGTTTTTTCTTTGTTTGTTTGGAATGAGCAGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAATGTTTTGGCCGGCAAGAATCTTACCTTCGATCACTTGAAAATTACTGCACCAGAGCATAGTCCCAACACCGATGGAATTCACTTGGGTGATTCAGAAGACGTTTACATTCTCAACACCGTAATCGCAACGGGAGATGATTGTATATCGGTGGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACCGGGACATGGCATTAGCATAGGCAGCTTGGGCAAGTATAAAACTGAAAAAGAAGTGGTAGGAGTTACAGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCATGGCCAGATTCTGCCGTCTCATACCCAGCCTCTGACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCCATCATCATAGATCAAGAATATTGTCCATGGAATCAATGCAATCGAAAGGTATGTATTAAAATCGAACCTCGTTGGTTTCCAACTTATTATCTTTTGAACACAAGTATTAATTAATCTTTATTTTGAACATCTAGGTTCCATCAACAATTAAGATTAGCAAAGTTAGTTTCAAGAACATTAGGGGCACATCTTCTACTCCAGTTGCAGTCAAACTTGTTTGCAGTAAAAGTCATCCATGCGAGGATGTGGAAATTGCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGCCAATTGTGTCCGAGTGTGCAAATGTGAAACCGACCATTTCTGGAAAGCAAAACCCTCCCATC

mRNA sequence

TTAGCAGATGCATGGAAGGAAGCATGTGCGTCGGCTACTCCAAGTAAAGTATTGGTTCCAAAAGGAACTTATCAATTAGGAGAATCCAGGCTCAAAGGTCCATGTAAAAGTCCTATCGAGCTTCTAGTTGAAGGAACATTACAAGCTTCTCCTACCGACACGGAAGGAGATGGGTTGCTTGTTATGGAATACGTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTGGTTGGGAAAAGAATGATTGCCACCTGAAGAAAGAATGCAAAAAGCTTCCCATGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAATGTTTTGGCCGGCAAGAATCTTACCTTCGATCACTTGAAAATTACTGCACCAGAGCATAGTCCCAACACCGATGGAATTCACTTGGGTGATTCAGAAGACGTTTACATTCTCAACACCGTAATCGCAACGGGAGATGATTGTATATCGGTGGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACCGGGACATGGCATTAGCATAGGCAGCTTGGGCAAGTATAAAACTGAAAAAGAAGTGGTAGGAGTTACAGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCATGGCCAGATTCTGCCGTCTCATACCCAGCCTCTGACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCCATCATCATAGATCAAGAATATTGTCCATGGAATCAATGCAATCGAAAGGTTCCATCAACAATTAAGATTAGCAAAGTTAGTTTCAAGAACATTAGGGGCACATCTTCTACTCCAGTTGCAGTCAAACTTGTTTGCAGTAAAAGTCATCCATGCGAGGATGTGGAAATTGCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGCCAATTGTGTCCGAGTGTGCAAATGTGAAACCGACCATTTCTGGAAAGCAAAACCCTCCCATC

Coding sequence (CDS)

TTAGCAGATGCATGGAAGGAAGCATGTGCGTCGGCTACTCCAAGTAAAGTATTGGTTCCAAAAGGAACTTATCAATTAGGAGAATCCAGGCTCAAAGGTCCATGTAAAAGTCCTATCGAGCTTCTAGTTGAAGGAACATTACAAGCTTCTCCTACCGACACGGAAGGAGATGGGTTGCTTGTTATGGAATACGTCGATCATTTGACATTGTCTGGTACTGGAGTTTTCGATGGCCAAGGAAAAGCTGGTTGGGAAAAGAATGATTGCCACCTGAAGAAAGAATGCAAAAAGCTTCCCATGAATTTGAAGTTCAATTTCATCACAAATTCGATAGTGAAGGACATAACTTCATTGGATAGCAAGAATTTTCATATCAATGTTTTGGCCGGCAAGAATCTTACCTTCGATCACTTGAAAATTACTGCACCAGAGCATAGTCCCAACACCGATGGAATTCACTTGGGTGATTCAGAAGACGTTTACATTCTCAACACCGTAATCGCAACGGGAGATGATTGTATATCGGTGGGATACACTAACAGAAAAATAACCATTAGTGATGTTACTTGCGGACCGGGACATGGCATTAGCATAGGCAGCTTGGGCAAGTATAAAACTGAAAAAGAAGTGGTAGGAGTTACAGTGAAGAAATGCAAATTAATCGGTACTACAAATGGTGTCAGGATCAAATCATGGCCAGATTCTGCCGTCTCATACCCAGCCTCTGACATGCATTTTGAAGATATTGAAATGGATAATGTTGCTAACCCCATCATCATAGATCAAGAATATTGTCCATGGAATCAATGCAATCGAAAGGTTCCATCAACAATTAAGATTAGCAAAGTTAGTTTCAAGAACATTAGGGGCACATCTTCTACTCCAGTTGCAGTCAAACTTGTTTGCAGTAAAAGTCATCCATGCGAGGATGTGGAAATTGCTGATATTGACCTCACTTATAGTGGTAAAGAAGGGCCAATTGTGTCCGAGTGTGCAAATGTGAAACCGACCATTTCTGGAAAGCAAAACCCTCCCATC

Protein sequence

LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLLVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDSKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYPASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKLVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI

Homology

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BLAST of CmaCh00G005930 vs. Swiss-Prot
Match: PGLR_OENOR (Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.7e-119
Identity = 208/349 (59.60%), Postives = 265/349 (75.93%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQA--SPTDTEGDG 60
           L  AWKEACASA+PS +LVPKG + +G   L+GPCKS I L ++GTL+A   P+  +G G
Sbjct: 6   LTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSKIKGLG 65

Query: 61  LLVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKE-CKKLPMNLKFNFITNSIVKDITS 120
            + +  +D LT+ G GVFDGQGK+ W +NDCH     CK L MNL+   +TNSI++D+T+
Sbjct: 66  WINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSILRDVTT 125

Query: 121 LDSKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVG 180
           LDSKNFH+NV+  KNLTF+  KI+A E S NTDGIH+G S+ V I+NT I TGDDCIS+G
Sbjct: 126 LDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDDCISLG 185

Query: 181 YTNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAV 240
             ++ I I+++TCGPGHGIS+GSLG+YK E+ VVG+ VK C + G+ NGVRIK+WP S  
Sbjct: 186 DGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTWPKSEP 245

Query: 241 SYPASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVA 300
              AS+MHF+DI M++V  PI+IDQ YCP+NQC  +VPS++K+SK+SFKNI+GTS+T  A
Sbjct: 246 G-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTSTTKEA 305

Query: 301 VKLVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           VKLVCSKS PC  VE+ADIDLTYSGK GP  S C N+KPTI GKQ P I
Sbjct: 306 VKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAI 353

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BLAST of CmaCh00G005930 vs. Swiss-Prot
Match: PGLR_BRANA (Polygalacturonase OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 4.3e-117
Identity = 192/342 (56.14%), Postives = 257/342 (75.15%), Query Frame = 1


Query: 4   AWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEG-DGLLVM 63
           A+  AC +  PS+VL+PKG ++LGE+ + GPCKSPIE  ++G ++     T+G D  +V 
Sbjct: 42  AFTSACQAPAPSQVLIPKGDFKLGETVMTGPCKSPIEFTLQGNVKTDGGSTQGKDRWVVF 101

Query: 64  EYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDSKN 123
           E ++   L+G G FDG+G A W+ N+CH   ECKKLP++++F+F+ N+ +KD+TSLD+KN
Sbjct: 102 EKINGFKLNGGGTFDGEGNAAWKANNCHKTFECKKLPISVRFDFVDNAEIKDVTSLDAKN 161

Query: 124 FHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTNRK 183
           FH NV++GKN+TFD++KI AP  SPNTDGIHLG  E V ILNT IATGDDCISVG   + 
Sbjct: 162 FHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEGVKILNTKIATGDDCISVGDGMKN 221

Query: 184 ITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYPAS 243
           + I  V CGPGHGIS+GSLG+Y  E++V  +TVK C L GT+NG+RIK+WP +A +  A+
Sbjct: 222 LLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCTLEGTSNGLRIKTWPSAACTTTAA 281

Query: 244 DMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKLVC 303
            +HFEDI ++ V+NPI+IDQEYCPWNQCN+  PSTIK+  ++F+NIRGTS    AVKL+C
Sbjct: 282 GIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIKLVDITFRNIRGTSENKDAVKLLC 341

Query: 304 SKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           SK HPCE+VEI DI++ Y+G +GP   EC NV P + G QNP
Sbjct: 342 SKGHPCENVEIGDINIEYTGPDGPPTFECTNVTPKLVGAQNP 383

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BLAST of CmaCh00G005930 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-109
Identity = 184/344 (53.49%), Postives = 252/344 (73.26%), Query Frame = 1


Query: 3   DAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQA--SPTDTEGDGLL 62
           DAWKEACAS TPS V++PKGTY L +  L+GPCK+PIE+ V+GT+QA   P+  +    +
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 63  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 122
               V++  + G G+FDGQG   +EKN C  ++   KLP+N++F+F+TN++++DITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFLTNALIQDITSKDS 170

Query: 123 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 182
           K FHINV A KN+T + LKI AP+ SPNTDGIH+G SE V I+ + I TGDDCIS+G   
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 183 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 242
           + + I ++TCGPGHGISIGSLGK++ E+ V G+ +  C +  T+NG RIK+WP       
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-GGA 290

Query: 243 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 302
            S++HFEDI M+NV++PI+IDQ+YCPWN+C +   S +K+S +SFKNIRGTS+ P A+K 
Sbjct: 291 VSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKF 350

Query: 303 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           +CS S PC++VE+ADID+ ++G E P  S+C NVKP  SGK NP
Sbjct: 351 ICSGSSPCQNVELADIDIKHNGAE-PATSQCLNVKPITSGKLNP 392

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BLAST of CmaCh00G005930 vs. Swiss-Prot
Match: PGLR_GOSBA (Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-108
Identity = 183/344 (53.20%), Postives = 251/344 (72.97%), Query Frame = 1


Query: 3   DAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQA--SPTDTEGDGLL 62
           DAWKEACAS TPS V++PKGTY L +  L+GPCK+PIE+ V+GT+QA   P+  +    +
Sbjct: 51  DAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWV 110

Query: 63  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 122
               V++  + G G+FDGQG   +EKN C  ++   KLP+N++F+F+TN++++DITS DS
Sbjct: 111 RFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDS 170

Query: 123 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 182
           K FHINV A KN+T + LKI AP+ SPNTDGIH+G SE V I+ + I TGDDCIS+G   
Sbjct: 171 KLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGT 230

Query: 183 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 242
           + + I ++TCGPGHGISIGSLGK++ E+ V G+ +  C +  T+NG RIK+WP       
Sbjct: 231 KNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-GGA 290

Query: 243 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 302
            S++HFEDI M+NV++PI+IDQ+YCPWN+C +   S +K+S +SFKNIRGTS+ P A+K 
Sbjct: 291 VSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKF 350

Query: 303 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           +CS S PC++VE+ADID+ ++G E P  S+C NVKP   GK NP
Sbjct: 351 ICSGSSPCQNVELADIDIQHNGAE-PATSQCLNVKPITIGKLNP 392

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BLAST of CmaCh00G005930 vs. Swiss-Prot
Match: PGLR_MEDSA (Polygalacturonase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.6e-108
Identity = 192/347 (55.33%), Postives = 247/347 (71.18%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQA--SPTDTEG-D 60
           L  AW EACAS T +K+++P GTYQL    LKGPCK+PIEL V+GT+QA   P+  +G +
Sbjct: 42  LTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIELQVDGTIQAPADPSVIKGTE 101

Query: 61  GLLVMEYVDHLTLSGTGVFDGQGKAGWEK----NDCHLKKECKKLPMNLKFNFITNSIVK 120
                 Y+DHLTLSG GVFDGQG   ++K    +    K    K+ MN  FNF+ NSIV+
Sbjct: 102 QWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNSNSKVFMNFGFNFVNNSIVR 161

Query: 121 DITSLDSKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDC 180
            +TS DSKNFH+ V   KN+TFD   ITAP  SPNTDGIH+G S DV ILNT I TGDDC
Sbjct: 162 GVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILNTNIGTGDDC 221

Query: 181 ISVGYTNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWP 240
           +S+G  +++IT+  V CGPGHG+S+GSLGK+ TE+ V G+TVK C L  T NGVRIK+WP
Sbjct: 222 VSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTATDNGVRIKTWP 281

Query: 241 DSAVSYPASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSS 300
           D+  +   SD+HFEDI M NV NP+IIDQEY PWNQC++K PS IK+SK+SFKN++GTS 
Sbjct: 282 DAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKNPSKIKLSKISFKNVKGTSG 341

Query: 301 TPVAVKLVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISG 341
           T   V L+CS + PC+ VE+ ++DL ++G   P  ++C NVKP ++G
Sbjct: 342 TAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAKCTNVKPLVTG 386

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BLAST of CmaCh00G005930 vs. TrEMBL
Match: E3VSV7_CUCPE (Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 6.5e-197
Identity = 336/346 (97.11%), Postives = 341/346 (98.55%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 60
           LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL
Sbjct: 57  LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 116

Query: 61  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 120
           VMEY+DHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS
Sbjct: 117 VMEYIDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 176

Query: 121 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 180
           KNFHINVLAGKNLTFDHLKITAP +SPNTDGIHLGDSEDVYILNT IATGDDCISVGYTN
Sbjct: 177 KNFHINVLAGKNLTFDHLKITAPHNSPNTDGIHLGDSEDVYILNTAIATGDDCISVGYTN 236

Query: 181 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 240
           RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP
Sbjct: 237 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 296

Query: 241 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 300
           ASDMHFEDIEM+NVANPIIIDQEYCPWNQCNRKVPS IKISKVSFKNIRGTSSTPVAVKL
Sbjct: 297 ASDMHFEDIEMENVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNIRGTSSTPVAVKL 356

Query: 301 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           VCSKS+PCE VEIADIDLTYSGKEGP VSEC+NVKPTISGKQNPPI
Sbjct: 357 VCSKSNPCEGVEIADIDLTYSGKEGPAVSECSNVKPTISGKQNPPI 402

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BLAST of CmaCh00G005930 vs. TrEMBL
Match: A0A0A0K3B7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 2.4e-130
Identity = 224/346 (64.74%), Postives = 274/346 (79.19%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 60
           L DAW +ACAS  PS V++PKGT+++ E   KGPCKSPIE  V GTLQA P    GD  +
Sbjct: 50  LKDAWNDACASDRPSAVVIPKGTFKVREGEFKGPCKSPIEFRVHGTLQA-PKHPHGDSWI 109

Query: 61  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 120
              YVD + LSG GVFDGQGKAGWEKNDCH + +C KLP++L+F+FITNSIV+ ITSLDS
Sbjct: 110 TFAYVDRMRLSGGGVFDGQGKAGWEKNDCHKRIDCAKLPISLRFDFITNSIVRRITSLDS 169

Query: 121 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 180
           KNFH+N+L   NLTF  + I APE+SPNTDGIH+G S  + IL + IATGDDCIS+G  +
Sbjct: 170 KNFHVNILGCNNLTFQGVNIIAPENSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGS 229

Query: 181 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 240
           ++I +++V CGPGHGISIGSLGKY  E+ V GV V  C +I TTNGVRIK+WP S V+  
Sbjct: 230 KRIKVNNVICGPGHGISIGSLGKYNNEEPVEGVIVNNCTIINTTNGVRIKTWPASPVAGI 289

Query: 241 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 300
           A++MHF DI M NV+NPI+IDQEYCPWNQCNR++PS IKI+KVSFKNIRG+S+TPVAVKL
Sbjct: 290 ATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIKINKVSFKNIRGSSATPVAVKL 349

Query: 301 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           +CS + PCE+V++A+IDL Y+G +G I SEC NVKP ISG QNPPI
Sbjct: 350 ICSSNLPCEEVKVANIDLVYNGIKGSITSECMNVKPIISGIQNPPI 394

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BLAST of CmaCh00G005930 vs. TrEMBL
Match: A0A059DD70_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01068 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 8.1e-123
Identity = 218/348 (62.64%), Postives = 258/348 (74.14%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQA--SPTDTEGDG 60
           L  AWKEACA+   SKVLVP GTY L E  L+GPCKS IE+ V+GTLQA   P   + DG
Sbjct: 44  LVSAWKEACAATEASKVLVPAGTYVLREVVLEGPCKSSIEVQVDGTLQAPADPAQMKTDG 103

Query: 61  LLVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSL 120
            +    VD LTLSG+G FDGQGK  W KNDC+LK +C  LP+N++F+ +TN +VKDITSL
Sbjct: 104 WVAFRGVDLLTLSGSGTFDGQGKTAWTKNDCNLKTDCVTLPINIRFDSVTNGMVKDITSL 163

Query: 121 DSKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGY 180
           DSK FH+NVL  KNLTF H+ ITAP  SPNTDGIH+G S  + I++T I TGDDCIS+G 
Sbjct: 164 DSKQFHVNVLNCKNLTFQHVTITAPGDSPNTDGIHIGRSTGINIIDTGIKTGDDCISIGD 223

Query: 181 TNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVS 240
            + ++TI+ VTCGPGHGIS+GSLGKY  E+ V G+ VK C + GT NG+RIK+WP S   
Sbjct: 224 GSEQMTITGVTCGPGHGISVGSLGKYPNEQPVTGLHVKNCTMTGTMNGLRIKTWPASPAG 283

Query: 241 YPASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAV 300
             ASDMHFEDI +DNV NP+IIDQ+YCPWNQC  + PS IKIS VSF  IRGTSST  AV
Sbjct: 284 -TASDMHFEDITLDNVGNPVIIDQQYCPWNQCKSQAPSQIKISNVSFSRIRGTSSTQAAV 343

Query: 301 KLVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
            L CS   PC +VEI+DID+ Y G EGP  S C+NVKPTISGKQNP I
Sbjct: 344 TLACSSRLPCTEVEISDIDIAYHGPEGPATSVCSNVKPTISGKQNPAI 390

[Close]

BLAST of CmaCh00G005930 vs. TrEMBL
Match: A0A059DEN9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01065 PE=3 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 8.1e-123
Identity = 218/348 (62.64%), Postives = 258/348 (74.14%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQA--SPTDTEGDG 60
           L  AWKEACA+   SKVLVP GTY L E  L+GPCKS IE+ V+GTLQA   P   + DG
Sbjct: 109 LVSAWKEACAATEASKVLVPAGTYVLREVVLEGPCKSSIEVQVDGTLQAPADPAQMKTDG 168

Query: 61  LLVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSL 120
            +    VD LTLSG+G FDGQGK  W KNDC+LK +C  LP+N++F+ +TN +VKDITSL
Sbjct: 169 WVAFRGVDLLTLSGSGTFDGQGKTAWTKNDCNLKTDCVTLPINIRFDSVTNGMVKDITSL 228

Query: 121 DSKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGY 180
           DSK FH+NVL  KNLTF H+ ITAP  SPNTDGIH+G S  + I++T I TGDDCIS+G 
Sbjct: 229 DSKQFHVNVLNCKNLTFQHVTITAPGDSPNTDGIHIGRSTGINIIDTGIKTGDDCISIGD 288

Query: 181 TNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVS 240
            + ++TI+ VTCGPGHGIS+GSLGKY  E+ V G+ VK C + GT NG+RIK+WP S   
Sbjct: 289 GSEQMTITGVTCGPGHGISVGSLGKYPNEQPVTGLHVKNCTMTGTMNGLRIKTWPASPAG 348

Query: 241 YPASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAV 300
             ASDMHFEDI +DNV NP+IIDQ+YCPWNQC  + PS IKIS VSF  IRGTSST  AV
Sbjct: 349 -TASDMHFEDITLDNVGNPVIIDQQYCPWNQCKSQAPSQIKISNVSFSRIRGTSSTQAAV 408

Query: 301 KLVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
            L CS   PC +VEI+DID+ Y G EGP  S C+NVKPTISGKQNP I
Sbjct: 409 TLACSSRLPCTEVEISDIDIAYHGPEGPATSVCSNVKPTISGKQNPAI 455

[Close]

BLAST of CmaCh00G005930 vs. TrEMBL
Match: W9SBW1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_020040 PE=3 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.1e-122
Identity = 216/348 (62.07%), Postives = 270/348 (77.59%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTD----TEG 60
           L++AWK+ACAS    KVL+P+GTY+L  + L+GPCK PI++ ++GTL+A PTD     EG
Sbjct: 45  LSNAWKDACASPIRGKVLIPRGTYKLSRATLEGPCKVPIKVQLQGTLRA-PTDPSGFNEG 104

Query: 61  DGLLVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDIT 120
           DG +    VD LTL+G G FDGQG A W KN C  ++ C KLP+N +F+F+TNS+++DI 
Sbjct: 105 DGWVTFRNVDGLTLAGGGTFDGQGSAVWGKN-CEQQQYCGKLPINFRFDFVTNSLIRDII 164

Query: 121 SLDSKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISV 180
           SL+SK FHINVL G+N+TF  +KI APE SPNTDGIH+G S  + I +TVI TGDDC+S+
Sbjct: 165 SLNSKQFHINVLGGQNVTFSRVKIIAPEDSPNTDGIHIGRSSGISITDTVIQTGDDCVSL 224

Query: 181 GYTNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSA 240
           G   ++I+I  VTCGPGHGIS+GSLGKY  E  V GV V+ C +  T+NGVR+K+WPDS 
Sbjct: 225 GDGCKEISIRRVTCGPGHGISVGSLGKYSNEDPVEGVIVRNCTIRNTSNGVRVKTWPDSH 284

Query: 241 VSYPASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPV 300
               AS++HFEDI M+NV NP++IDQEYCPWNQCN KVPS IKIS VSFKNIRGTS+T +
Sbjct: 285 DGL-ASNLHFEDIVMENVGNPVLIDQEYCPWNQCNAKVPSRIKISDVSFKNIRGTSTTAL 344

Query: 301 AVKLVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           AV LVCS   PC++VEIADIDL YSG +GPI+S+C NVKPTISGKQNP
Sbjct: 345 AVNLVCSSGFPCQNVEIADIDLQYSGNDGPIMSQCKNVKPTISGKQNP 389

[Close]

BLAST of CmaCh00G005930 vs. TAIR10
Match: AT3G07820.1 (AT3G07820.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 415.2 bits (1066), Expect = 3.9e-116
Identity = 191/345 (55.36%), Postives = 259/345 (75.07%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEG-DGL 60
           L  A+  AC S++PSKV++PKG ++LGE  ++GPCK+PIE+ ++GT++A     +G +  
Sbjct: 39  LLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQGTVKADGNAIQGKEKW 98

Query: 61  LVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLD 120
           +V   +D   L+G G FDG+G A W  N+CH   ECKKLP++++F+FI NS ++DI+S+D
Sbjct: 99  VVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIRFDFILNSEIRDISSID 158

Query: 121 SKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYT 180
           +KNFHINVL  KN+T +++KI APE SPNTDGIHLG S+ V ILN+ I+TGDDCISVG  
Sbjct: 159 AKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDG 218

Query: 181 NRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSY 240
            + + +  VTCGPGHGIS+GSLG+Y  E++V G+ V  C L  T NG+RIK+WP +A S 
Sbjct: 219 MKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETDNGLRIKTWPSAACST 278

Query: 241 PASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVK 300
            ASD+HFEDI + +V+NPI+IDQEYCPWNQCN++  STIK+  +SFKNIRGTS    AVK
Sbjct: 279 TASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVK 338

Query: 301 LVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           L+CSK +PC++VEI DID+ Y+G +GP    C+NV P I G Q+P
Sbjct: 339 LLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQSP 383

[Close]

BLAST of CmaCh00G005930 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 409.8 bits (1052), Expect = 1.6e-114
Identity = 188/345 (54.49%), Postives = 258/345 (74.78%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEG-DGL 60
           L  A+  AC + T SKV++ KG ++LGE  + GPCK+P+E+ ++GTL+A     +G +  
Sbjct: 40  LLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQGTLKADGKAIQGKERW 99

Query: 61  LVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLD 120
           +V   ++   L+G G+FDG+G A W  N+CH   ECKKLP++++F+F+ N+ ++DI+S+D
Sbjct: 100 VVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVENAEIRDISSID 159

Query: 121 SKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYT 180
           +KNFHINVL  KN+TFD++K+ AP  SPNTDGIHLG SE V ILN+ IATGDDCISVG  
Sbjct: 160 AKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKILNSKIATGDDCISVGDG 219

Query: 181 NRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSY 240
            + + + +V CGPGHGIS+GSLG+Y  E++V G+TV  C L GT NG+RIK+WP +A + 
Sbjct: 220 MKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGTDNGLRIKTWPSAACAT 279

Query: 241 PASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVK 300
            AS +HFE+I ++NV+NPI+IDQEYCPWNQCN++ PSTIK+  +SFKNIRGTS    AVK
Sbjct: 280 TASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVK 339

Query: 301 LVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           L+CSK+HPC +VEI +I+L Y G +GP    C+NV P + G QNP
Sbjct: 340 LLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQNP 384

[Close]

BLAST of CmaCh00G005930 vs. TAIR10
Match: AT3G07830.1 (AT3G07830.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 395.2 bits (1014), Expect = 4.1e-110
Identity = 180/345 (52.17%), Postives = 253/345 (73.33%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEG-DGL 60
           L  A+  AC S TP KV++PKG ++LGE  + GPCKSP+E+ + GT+ A      G +  
Sbjct: 40  LLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKSPVEITLLGTVLADGNSIHGKEKW 99

Query: 61  LVMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLD 120
           +V + +D   L+G G FDG+G A W  N+CH   ECKKLP++++F+F+TN+ ++DI+S+D
Sbjct: 100 VVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECKKLPISIRFDFVTNAEIRDISSID 159

Query: 121 SKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYT 180
           +KNFHINV+  KN+TFD++KI AP  SPNTDGIHLG S  V I+N+ I+TGDDC+SVG  
Sbjct: 160 AKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDG 219

Query: 181 NRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSY 240
              + + +V CGPGHGIS+GSLG+Y  E++V G+ V  C L  T NG+RIK+WP +A S 
Sbjct: 220 MVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACST 279

Query: 241 PASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVK 300
            AS++HFE+I + NV+NPI+IDQEYCPWNQCN++  S+IK++ +SF+ IRGTS    AVK
Sbjct: 280 TASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVK 339

Query: 301 LVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           L+CSK +PCE+V++ DI++ Y+G +GP    C+NV+P + G Q P
Sbjct: 340 LLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRPKLVGTQFP 384

[Close]

BLAST of CmaCh00G005930 vs. TAIR10
Match: AT5G48140.1 (AT5G48140.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 392.1 bits (1006), Expect = 3.5e-109
Identity = 175/344 (50.87%), Postives = 249/344 (72.38%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 60
           L  A+ EAC   T S V++PKG Y+LGE  + GPCK+PI + + GT++A       +  +
Sbjct: 40  LLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLGTVKADGNANGKEKWV 99

Query: 61  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 120
               ++   L+G GVFDG+G A W  N+CH    CKKLP++++F+F+T++ ++ ITSLD+
Sbjct: 100 AFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFDFVTDAKIRGITSLDA 159

Query: 121 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 180
           K+FHINV+  KN+TF+ +KI AP  SPNTDGIH+G S+ + I+N+ I+TGDDC+SVG   
Sbjct: 160 KHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINSFISTGDDCVSVGDGM 219

Query: 181 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 240
           + + +  VTCGPGHGISIGSLG+Y  E+ V G+ +  C L  T NG+RIK+WP +A +  
Sbjct: 220 KNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDNGLRIKTWPSAACTTT 279

Query: 241 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 300
           ASD+HFE+I + NV+NPI+IDQEYCPWNQCN++ PSTIK++ +SFK IRGTS    AVKL
Sbjct: 280 ASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKDAVKL 339

Query: 301 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           +CSK +PC++VE+ D+++ Y+G +GP   +C+NV P + G Q P
Sbjct: 340 LCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIP 383

[Close]

BLAST of CmaCh00G005930 vs. TAIR10
Match: AT3G14040.1 (AT3G14040.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 346.7 bits (888), Expect = 1.7e-95
Identity = 172/347 (49.57%), Postives = 229/347 (65.99%), Query Frame = 1


Query: 2   ADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPT---DTEGDG 61
           A AWKEACA+   S + VPKG Y +     KGPCK P+ L + G  +A  T        G
Sbjct: 91  AAAWKEACAAG--STITVPKGEYLVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAG 150

Query: 62  LLVMEYVDHLTLSGT-GVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITS 121
            +  E +   TL+G   +FDGQG   W+ NDC    +C  LP+N++F  +TNS +  ITS
Sbjct: 151 WIDFENLADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITS 210

Query: 122 LDSKNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVG 181
            +SK FH+N+L  KN+T   + I AP  S NTDGIH+G S  V ++   I TGDDC+S+G
Sbjct: 211 TNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIG 270

Query: 182 YTNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAV 241
                + + +V CGPGHGISIGSLG+Y  E+ V GVTV+KC +  T NGVRIK+WP S  
Sbjct: 271 DGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPP 330

Query: 242 SYPASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVA 301
              AS++ FEDI MDNV+ P++IDQEYCP+  C   VPS +K+S V+ KNI+GTS+T VA
Sbjct: 331 GI-ASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVA 390

Query: 302 VKLVCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNP 345
           VKL+CSK  PC ++ ++DI+L ++GKEGP VS C+N+KP +SGK  P
Sbjct: 391 VKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVP 434

[Close]

BLAST of CmaCh00G005930 vs. NCBI nr
Match: gi|310753534|gb|ADP09681.1| (polygalacturonase [Cucurbita pepo])

HSP 1 Score: 694.5 bits (1791), Expect = 9.4e-197
Identity = 336/346 (97.11%), Postives = 341/346 (98.55%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 60
           LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL
Sbjct: 57  LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 116

Query: 61  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 120
           VMEY+DHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS
Sbjct: 117 VMEYIDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 176

Query: 121 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 180
           KNFHINVLAGKNLTFDHLKITAP +SPNTDGIHLGDSEDVYILNT IATGDDCISVGYTN
Sbjct: 177 KNFHINVLAGKNLTFDHLKITAPHNSPNTDGIHLGDSEDVYILNTAIATGDDCISVGYTN 236

Query: 181 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 240
           RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP
Sbjct: 237 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 296

Query: 241 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 300
           ASDMHFEDIEM+NVANPIIIDQEYCPWNQCNRKVPS IKISKVSFKNIRGTSSTPVAVKL
Sbjct: 297 ASDMHFEDIEMENVANPIIIDQEYCPWNQCNRKVPSAIKISKVSFKNIRGTSSTPVAVKL 356

Query: 301 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           VCSKS+PCE VEIADIDLTYSGKEGP VSEC+NVKPTISGKQNPPI
Sbjct: 357 VCSKSNPCEGVEIADIDLTYSGKEGPAVSECSNVKPTISGKQNPPI 402

[Close]

BLAST of CmaCh00G005930 vs. NCBI nr
Match: gi|659134134|ref|XP_008467043.1| (PREDICTED: exopolygalacturonase-like, partial [Cucumis melo])

HSP 1 Score: 589.3 bits (1518), Expect = 4.2e-165
Identity = 281/346 (81.21%), Postives = 310/346 (89.60%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 60
           LA AWKEACAS TPSKVL+PKG+Y L +S LKGPCKS IEL +EGTLQA P D +GDGLL
Sbjct: 8   LASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQA-PADPKGDGLL 67

Query: 61  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 120
           ++EYVD LT+SGTGV DGQGKAGWEKNDCHLKKEC KLPMNLK NF+TNSIVKDITSLDS
Sbjct: 68  LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 127

Query: 121 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 180
           KN+HIN+L  KNLTFDH+ ITAP +SPNTDGIH+  SE + ILNT IATGDDCISVG TN
Sbjct: 128 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 187

Query: 181 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 240
           +++ ISDVTCGPGHGISIGSLGKY  EKEVVGVTVKKCKL  TTNGVRIK+WPDSAV++P
Sbjct: 188 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 247

Query: 241 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 300
           ASDMHFEDIEM NV+NP+IIDQEYCPWNQCNRKVPS IKIS VSFKNIRGTS+TPVAVK+
Sbjct: 248 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 307

Query: 301 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           VCS+S+PCE VE+ADIDLTYSG EGPI S+CANVKP ISGKQNPPI
Sbjct: 308 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPI 352

[Close]

BLAST of CmaCh00G005930 vs. NCBI nr
Match: gi|659097567|ref|XP_008449696.1| (PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 587.4 bits (1513), Expect = 1.6e-164
Identity = 281/346 (81.21%), Postives = 311/346 (89.88%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 60
           LA AWKEACAS TPSKVL+PKGTY L +S LKGPCKS IEL +EGT+QAS  D +GDGLL
Sbjct: 47  LASAWKEACASTTPSKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQAS-VDVKGDGLL 106

Query: 61  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 120
           ++EYVD LT+SGTGV DGQGK  W KNDCHLKK C KLPMNLKFNF+TNSIVKDITSLDS
Sbjct: 107 LLEYVDQLTVSGTGVVDGQGKTAWGKNDCHLKKICTKLPMNLKFNFVTNSIVKDITSLDS 166

Query: 121 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 180
           KN+H N+LA KNLTFDH+ ITAP +SPNTDGIH+GDSE + ILNT IATGDDCISVG +N
Sbjct: 167 KNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQINILNTNIATGDDCISVGISN 226

Query: 181 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 240
           ++I ISDVTCGPGHGISIGSLGKY  EKE+VGVTVKKCKL GTTNGVRIK+WPDSAV++P
Sbjct: 227 KQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 286

Query: 241 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 300
           ASDMHFEDIEM NV+NP++IDQEYCPWNQCNRKVPS IKISKVSFKNIRGTS+TPVAVKL
Sbjct: 287 ASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 346

Query: 301 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           VCS+S+PCE VE+ADIDLTYSG EGPI S+CANVKP ISGKQNPPI
Sbjct: 347 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPI 391

[Close]

BLAST of CmaCh00G005930 vs. NCBI nr
Match: gi|659097569|ref|XP_008449697.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 587.4 bits (1513), Expect = 1.6e-164
Identity = 281/346 (81.21%), Postives = 312/346 (90.17%), Query Frame = 1


Query: 1   LADAWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLL 60
           LA AWKEACAS TPSKVL+PKGTY L +S LKGPCKS IEL +EGT+QAS +D +GDGLL
Sbjct: 46  LASAWKEACASTTPSKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQAS-SDVKGDGLL 105

Query: 61  VMEYVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDS 120
           ++EYVD LT+SGTGV DGQGK  W KNDCHLKK C KLPMNLKFNF+TNSIVKDITSLDS
Sbjct: 106 LLEYVDQLTVSGTGVVDGQGKTAWGKNDCHLKKICTKLPMNLKFNFVTNSIVKDITSLDS 165

Query: 121 KNFHINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTN 180
           KN+H N+LA KNLTFDH+ ITAP +SPNTDGIH+GDSE + ILNT IATGDDCISVG +N
Sbjct: 166 KNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQINILNTNIATGDDCISVGSSN 225

Query: 181 RKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYP 240
           ++I ISDVTCGPGHGISIGSLGKY  EKE+VGVTVKKCKL GTTNGVRIK+WPDSAV++P
Sbjct: 226 KQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 285

Query: 241 ASDMHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKL 300
           ASDMHFEDIEM NV+NP++IDQEYCPWNQCNRKVPS IKISKVSFKNIRGTS+TPVAVKL
Sbjct: 286 ASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPVAVKL 345

Query: 301 VCSKSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           VCS+S+PCE VE+ADIDLTYSG EGPI S+CANVKP ISGKQNPPI
Sbjct: 346 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPI 390

[Close]

BLAST of CmaCh00G005930 vs. NCBI nr
Match: gi|778658546|ref|XP_011652893.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 584.7 bits (1506), Expect = 1.0e-163
Identity = 278/343 (81.05%), Postives = 309/343 (90.09%), Query Frame = 1


Query: 4   AWKEACASATPSKVLVPKGTYQLGESRLKGPCKSPIELLVEGTLQASPTDTEGDGLLVME 63
           AWK+ACAS TPSKVL+PKG+Y L +S LKGPCKSPIEL +EGTLQASP D +GDGLL++E
Sbjct: 52  AWKDACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQASP-DPKGDGLLLLE 111

Query: 64  YVDHLTLSGTGVFDGQGKAGWEKNDCHLKKECKKLPMNLKFNFITNSIVKDITSLDSKNF 123
           Y+D LT+SGTGV DGQGKAGWEKNDCHLKK C KLPM LK NFITNSIVKDITSLDSKN+
Sbjct: 112 YIDQLTVSGTGVLDGQGKAGWEKNDCHLKKICTKLPMTLKLNFITNSIVKDITSLDSKNY 171

Query: 124 HINVLAGKNLTFDHLKITAPEHSPNTDGIHLGDSEDVYILNTVIATGDDCISVGYTNRKI 183
           HIN+L  KNLTFDH+ ITAPE+SPNTDGIH+  SE + ILNT IATGDDCISVG TN++I
Sbjct: 172 HINLLGCKNLTFDHVTITAPENSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTNKQI 231

Query: 184 TISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCKLIGTTNGVRIKSWPDSAVSYPASD 243
            ISDVTCGPGHGISIGSLGKY  EKEVVGVTVKKCKL  TTNGVRIK+WPDS  ++PA+D
Sbjct: 232 VISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTSTTNGVRIKTWPDSVGTFPATD 291

Query: 244 MHFEDIEMDNVANPIIIDQEYCPWNQCNRKVPSTIKISKVSFKNIRGTSSTPVAVKLVCS 303
           MHFEDIEMDNV+NPIIIDQEYCPWNQCNRKVPS IKISKVSFKNIRGTS+T VAVK+VCS
Sbjct: 292 MHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSATAVAVKIVCS 351

Query: 304 KSHPCEDVEIADIDLTYSGKEGPIVSECANVKPTISGKQNPPI 347
           +S+PCE+VE+ADIDLTYSG EGPI S+CANVKP I+GKQNPPI
Sbjct: 352 QSNPCEEVEVADIDLTYSGSEGPIKSQCANVKPVITGKQNPPI 393

The following BLAST results are available for this feature:

BLAST of CmaCh00G005930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR_OENOR	2.7e-119	59.60	Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1	[more]
PGLR_BRANA	4.3e-117	56.14	Polygalacturonase OS=Brassica napus PE=2 SV=1	[more]
PGLR_GOSHI	3.3e-109	53.49	Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1	[more]
PGLR_GOSBA	1.3e-108	53.20	Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1	[more]
PGLR_MEDSA	1.6e-108	55.33	Polygalacturonase OS=Medicago sativa PE=2 SV=1	[more]

BLAST of CmaCh00G005930 vs. TrEMBL


Match Name	E-value	Identity	Description
E3VSV7_CUCPE	6.5e-197	97.11	Polygalacturonase OS=Cucurbita pepo GN=PG1 PE=2 SV=1	[more]
A0A0A0K3B7_CUCSA	2.4e-130	64.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G037910 PE=3 SV=1	[more]
A0A059DD70_EUCGR	8.1e-123	62.64	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01068 PE=3 SV=1	[more]
A0A059DEN9_EUCGR	8.1e-123	62.64	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01065 PE=3 SV=1	[more]
W9SBW1_9ROSA	1.1e-122	62.07	Uncharacterized protein OS=Morus notabilis GN=L484_020040 PE=3 SV=1	[more]

BLAST of CmaCh00G005930 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G07820.1	3.9e-116	55.36	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	1.6e-114	54.49	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	4.1e-110	52.17	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	3.5e-109	50.87	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	1.7e-95	49.57	Pectin lyase-like superfamily protein	[more]

BLAST of CmaCh00G005930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|310753534\|gb\|ADP09681.1\|	9.4e-197	97.11	polygalacturonase [Cucurbita pepo]	[more]
gi\|659134134\|ref\|XP_008467043.1\|	4.2e-165	81.21	PREDICTED: exopolygalacturonase-like, partial [Cucumis melo]	[more]
gi\|659097567\|ref\|XP_008449696.1\|	1.6e-164	81.21	PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Cucumis melo]	[more]
gi\|659097569\|ref\|XP_008449697.1\|	1.6e-164	81.21	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]
gi\|778658546\|ref\|XP_011652893.1\|	1.0e-163	81.05	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0004650	polygalacturonase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G005930.1	CmaCh00G005930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 9..337 score: 8.5E
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 187..200 scor
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 157..178 score: 860.0coord: 210..231 score: 19.0coord: 241..262 score: 6200.0coord: 130..156 score: 970.0coord: 180..200 score: 40
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 2..345 score: 5.81E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 2..345 score: 1.3E
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..346 score: 3.6E
None	No IPR available	PANTHER	PTHR31375:SF37	PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..346 score: 3.6E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh00G005930	Cucurbita maxima (Rimu)	cmacmaB023
CmaCh00G005930	Cucurbita moschata (Rifu)	cmacmoB026
CmaCh00G005930	Melon (DHL92) v3.5.1	cmameB009
CmaCh00G005930	Watermelon (Charleston Gray)	cmawcgB006
CmaCh00G005930	Cucurbita pepo (Zucchini)	cmacpeB014