CmaCh00G005710 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh00G005710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSenescence-associated protein
LocationCma_Chr00 : 40394967 .. 40395883 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGTGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCTGAGGACACTTCTCCAGACATCAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTAATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGGGGACAATGTTCAAAGGGTCGACGTGACATTCCTCCCTCGCCCACAAACAGGAGGCGCGCAAGCTGAGATCGAGACACGGTACCAGAGGTTGAATCAACCACCGTAGCGTCACGACAGCAGATGCCGAGGACTCAATTTTAAGCCATCCGTGCGACGGCGCACACGGGAGGCCAACATGTGCCCCCGCCAGTGCAACAAACCCAAGCGGTTGTTGTTGCATGTGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGA

mRNA sequence

ATGCCCCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGTGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCTGAGGACACTTCTCCAGACATCAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGGGGACAATGTTCAAAGGGTCGACGTGACATTCCTCCCTCGCCCACAAACAGGAGGCGCGCAAGCTGAGATCGAGACACGGTACCAGAGCGTCACGACAGCAGATGCCGAGGACTCAATTTTAAGCCATCCGTGCGACGGCGCACACGGGAGGCCAACATGTGCCCCCGCCAGTGCAACAAACCCAAGCGGTTGTTGTTGCATGTGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGA

Coding sequence (CDS)

ATGCCCCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGTGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCTGAGGACACTTCTCCAGACATCAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGGGGACAATGTTCAAAGGGTCGACGTGACATTCCTCCCTCGCCCACAAACAGGAGGCGCGCAAGCTGAGATCGAGACACGGTACCAGAGCGTCACGACAGCAGATGCCGAGGACTCAATTTTAAGCCATCCGTGCGACGGCGCACACGGGAGGCCAACATGTGCCCCCGCCAGTGCAACAAACCCAAGCGGTTGTTGTTGCATGTGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGA

Protein sequence

MPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPQTGGAQAEIETRYQSVTTADAEDSILSHPCDGAHGRPTCAPASATNPSGCCCMWGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESL
Homology
[Close]
BLAST of CmaCh00G005710 vs. TrEMBL
Match: A0A0A0KEK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 3.1e-88
Identity = 172/230 (74.78%), Postives = 180/230 (78.26%), Query Frame = 1 

Query: 1   MPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVDWRTG  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSN 120
           LGQNLPPDWGCIPKQPDSLTAPRGATGSE NGALTLSGAPFQGTCARS AED SPD NSN
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 121 AEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPQTG-----GA 180
            + ARFSSWALPGSLAVT+GILSRLTWGRVES+          V    R   G     G 
Sbjct: 121 VDDARFSSWALPGSLAVTRGILSRLTWGRVESV----------VPLRGRRSEGHAGVRGV 180

Query: 181 QAEIETR------YQSVTTADAEDSILSHPCDGAHGRPTCAPASATNPSG 220
             ++ETR      ++SV T   EDS LSHP DGAHGRP CA A  T+P G
Sbjct: 181 HVKVETRHRGWINHRSVATTSVEDSNLSHPHDGAHGRPVCALARTTSPHG 220

[Close]
BLAST of CmaCh00G005710 vs. TrEMBL
Match: A0A072TKH6_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_0021s0160 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.3e-75
Identity = 171/281 (60.85%), Postives = 186/281 (66.19%), Query Frame = 1 

Query: 12  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGC 71
           PF IR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG++LPPD GC
Sbjct: 137 PFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGC 196

Query: 72  IPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSWAL 131
           IPKQPDSLTAPRGATGS  +GALTL GAPFQGT ARSVAED SPD NS+   ARFSSWA+
Sbjct: 197 IPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAV 256

Query: 132 PGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPQTGGAQAEIETRYQSVTTADA 191
           PGSLAVT+GIL      RV     G   +R  +  + R          E    S      
Sbjct: 257 PGSLAVTRGIL------RVVPPDLGSRSKRRALRSMGR---------FEAMMPSTRRMHC 316

Query: 192 EDSILSHPCDGAHGRPTCAPASATNPSGCCCMWGAAM-----------RDAQADVPSARR 251
            D   +            A +SA  P      + A+            RDAQA VPSA  
Sbjct: 317 IDKARTPTMRCVRRGTPAARSSAHRPLQDEGPYAASQFPKRVVGSVFWRDAQAGVPSAEW 376

Query: 252 LRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRES 282
            RAQLAFKDS+VRGILQFTP IAFRYVLHRCESRDIRCRES
Sbjct: 377 PRAQLAFKDSMVRGILQFTPGIAFRYVLHRCESRDIRCRES 402

[Close]
BLAST of CmaCh00G005710 vs. TrEMBL
Match: A0A072TTW3_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_0055s0080 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.0e-60
Identity = 117/131 (89.31%), Postives = 120/131 (91.60%), Query Frame = 1 

Query: 12  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGC 71
           PFHIR  HI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWGC
Sbjct: 45  PFHIRPRHIVGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWGC 104

Query: 72  IPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSWAL 131
           IPKQPDSLTAPRGATGSE NGALTLSGAPFQGT ARSVAED SPD NSNAEG RFS WA 
Sbjct: 105 IPKQPDSLTAPRGATGSEHNGALTLSGAPFQGTWARSVAEDASPDYNSNAEGDRFSWWAY 164

Query: 132 PGSLAVTKGIL 143
           PGSL++T GIL
Sbjct: 165 PGSLSITTGIL 175

[Close]
BLAST of CmaCh00G005710 vs. TrEMBL
Match: A0A0B2SF05_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046946 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.2e-59
Identity = 116/133 (87.22%), Postives = 120/133 (90.23%), Query Frame = 1 

Query: 10  LPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDW 69
           L PFHIR GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG+NLPPDW
Sbjct: 32  LSPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDW 91

Query: 70  GCIPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSW 129
           GCIPKQPDS TAPRGATGS  +GALTLSGAPFQGT ARS  ED SPD NS+AEG RFS W
Sbjct: 92  GCIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDAEGDRFSWW 151

Query: 130 ALPGSLAVTKGIL 143
           A PGSLAVTKGIL
Sbjct: 152 AFPGSLAVTKGIL 164

[Close]
BLAST of CmaCh00G005710 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 5.2e-59
Identity = 116/133 (87.22%), Postives = 120/133 (90.23%), Query Frame = 1 

Query: 10    LPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDW 69
             L PFHIR GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG+NLPPDW
Sbjct: 19204 LSPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDW 19263

Query: 70    GCIPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSW 129
             GCIPKQPDS TAPRGATGS  +GALTLSGAPFQGT ARS  ED SPD NS+AEG RFS W
Sbjct: 19264 GCIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDAEGDRFSWW 19323

Query: 130   ALPGSLAVTKGIL 143
             A PGSLAVTKGIL
Sbjct: 19324 AFPGSLAVTKGIL 19336

[Close]
BLAST of CmaCh00G005710 vs. NCBI nr
Match: gi|700192065|gb|KGN47269.1| (hypothetical protein Csa_6G239680 [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 4.5e-88
Identity = 172/230 (74.78%), Postives = 180/230 (78.26%), Query Frame = 1 

Query: 1   MPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60
           MPQVDWRTG  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSN 120
           LGQNLPPDWGCIPKQPDSLTAPRGATGSE NGALTLSGAPFQGTCARS AED SPD NSN
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 121 AEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPQTG-----GA 180
            + ARFSSWALPGSLAVT+GILSRLTWGRVES+          V    R   G     G 
Sbjct: 121 VDDARFSSWALPGSLAVTRGILSRLTWGRVESV----------VPLRGRRSEGHAGVRGV 180

Query: 181 QAEIETR------YQSVTTADAEDSILSHPCDGAHGRPTCAPASATNPSG 220
             ++ETR      ++SV T   EDS LSHP DGAHGRP CA A  T+P G
Sbjct: 181 HVKVETRHRGWINHRSVATTSVEDSNLSHPHDGAHGRPVCALARTTSPHG 220

[Close]
BLAST of CmaCh00G005710 vs. NCBI nr
Match: gi|922327861|ref|XP_013443323.1| (hypothetical protein MTR_0021s0160 [Medicago truncatula])

HSP 1 Score: 290.4 bits (742), Expect = 3.3e-75
Identity = 171/281 (60.85%), Postives = 186/281 (66.19%), Query Frame = 1 

Query: 12  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGC 71
           PF IR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG++LPPD GC
Sbjct: 137 PFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDLGC 196

Query: 72  IPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSWAL 131
           IPKQPDSLTAPRGATGS  +GALTL GAPFQGT ARSVAED SPD NS+   ARFSSWA+
Sbjct: 197 IPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDYNSDGTAARFSSWAV 256

Query: 132 PGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPQTGGAQAEIETRYQSVTTADA 191
           PGSLAVT+GIL      RV     G   +R  +  + R          E    S      
Sbjct: 257 PGSLAVTRGIL------RVVPPDLGSRSKRRALRSMGR---------FEAMMPSTRRMHC 316

Query: 192 EDSILSHPCDGAHGRPTCAPASATNPSGCCCMWGAAM-----------RDAQADVPSARR 251
            D   +            A +SA  P      + A+            RDAQA VPSA  
Sbjct: 317 IDKARTPTMRCVRRGTPAARSSAHRPLQDEGPYAASQFPKRVVGSVFWRDAQAGVPSAEW 376

Query: 252 LRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRES 282
            RAQLAFKDS+VRGILQFTP IAFRYVLHRCESRDIRCRES
Sbjct: 377 PRAQLAFKDSMVRGILQFTPGIAFRYVLHRCESRDIRCRES 402

[Close]
BLAST of CmaCh00G005710 vs. NCBI nr
Match: gi|922327145|ref|XP_013442965.1| (transmembrane protein, putative [Medicago truncatula])

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-59
Identity = 117/131 (89.31%), Postives = 120/131 (91.60%), Query Frame = 1 

Query: 12  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGC 71
           PFHIR  HI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWGC
Sbjct: 45  PFHIRPRHIVGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWGC 104

Query: 72  IPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSWAL 131
           IPKQPDSLTAPRGATGSE NGALTLSGAPFQGT ARSVAED SPD NSNAEG RFS WA 
Sbjct: 105 IPKQPDSLTAPRGATGSEHNGALTLSGAPFQGTWARSVAEDASPDYNSNAEGDRFSWWAY 164

Query: 132 PGSLAVTKGIL 143
           PGSL++T GIL
Sbjct: 165 PGSLSITTGIL 175

[Close]
BLAST of CmaCh00G005710 vs. NCBI nr
Match: gi|955361480|ref|XP_014621876.1| (PREDICTED: uncharacterized protein LOC106795708 [Glycine max])

HSP 1 Score: 236.1 bits (601), Expect = 7.4e-59
Identity = 116/133 (87.22%), Postives = 120/133 (90.23%), Query Frame = 1 

Query: 10  LPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDW 69
           L PFHIR GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG+NLPPDW
Sbjct: 32  LSPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDW 91

Query: 70  GCIPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSW 129
           GCIPKQPDS TAPRGATGS  +GALTLSGAPFQGT ARS  ED SPD NS+AEG RFS W
Sbjct: 92  GCIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDAEGDRFSWW 151

Query: 130 ALPGSLAVTKGIL 143
           A PGSLAVTKGIL
Sbjct: 152 AFPGSLAVTKGIL 164

[Close]
BLAST of CmaCh00G005710 vs. NCBI nr
Match: gi|734424954|gb|KHN42849.1| (hypothetical protein glysoja_046946 [Glycine soja])

HSP 1 Score: 236.1 bits (601), Expect = 7.4e-59
Identity = 116/133 (87.22%), Postives = 120/133 (90.23%), Query Frame = 1 

Query: 10  LPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDW 69
           L PFHIR GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG+NLPPDW
Sbjct: 32  LSPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDW 91

Query: 70  GCIPKQPDSLTAPRGATGSECNGALTLSGAPFQGTCARSVAEDTSPDINSNAEGARFSSW 129
           GCIPKQPDS TAPRGATGS  +GALTLSGAPFQGT ARS  ED SPD NS+AEG RFS W
Sbjct: 92  GCIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDAEGDRFSWW 151

Query: 130 ALPGSLAVTKGIL 143
           A PGSLAVTKGIL
Sbjct: 152 AFPGSLAVTKGIL 164

The following BLAST results are available for this feature:
BLAST of CmaCh00G005710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh00G005710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEK9_CUCSA3.1e-8874.78Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1[more]
A0A072TKH6_MEDTR2.3e-7560.85Uncharacterized protein OS=Medicago truncatula GN=MTR_0021s0160 PE=4 SV=1[more]
A0A072TTW3_MEDTR8.0e-6089.31Transmembrane protein, putative OS=Medicago truncatula GN=MTR_0055s0080 PE=4 SV=... [more]
A0A0B2SF05_GLYSO5.2e-5987.22Uncharacterized protein OS=Glycine soja GN=glysoja_046946 PE=4 SV=1[more]
I1LXS9_SOYBN5.2e-5987.22Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
BLAST of CmaCh00G005710 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh00G005710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192065|gb|KGN47269.1|4.5e-8874.78hypothetical protein Csa_6G239680 [Cucumis sativus][more]
gi|922327861|ref|XP_013443323.1|3.3e-7560.85hypothetical protein MTR_0021s0160 [Medicago truncatula][more]
gi|922327145|ref|XP_013442965.1|1.1e-5989.31transmembrane protein, putative [Medicago truncatula][more]
gi|955361480|ref|XP_014621876.1|7.4e-5987.22PREDICTED: uncharacterized protein LOC106795708 [Glycine max][more]
gi|734424954|gb|KHN42849.1|7.4e-5987.22hypothetical protein glysoja_046946 [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G005710.1CmaCh00G005710.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33047FAMILY NOT NAMEDcoord: 10..150
score: 3.2
NoneNo IPR availablePANTHERPTHR33047:SF4SUBFAMILY NOT NAMEDcoord: 10..150
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G005710Cucurbita moschata (Rifu)cmacmoB026
CmaCh00G005710Melon (DHL92) v3.5.1cmameB009
CmaCh00G005710Watermelon (Charleston Gray)cmawcgB006
CmaCh00G005710Cucurbita pepo (Zucchini)cmacpeB014
CmaCh00G005710Watermelon (97103) v2cmawmbB012
CmaCh00G005710Cucurbita maxima (Rimu)cmacmaB023