CmaCh00G005640 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh00G005640
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionSenescence-associated protein
LocationCma_Chr00 : 40198942 .. 40200043 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAGAAGGCGCATGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAAGCGTAACAAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTAATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGGGGACAATGTTCAAAGGGTCGACGTGACATTCCTCCCTCGCCCACCAACAGGAGGCGCGCAAGCTGAGATCGAGACGCGGTACCGAGGTTGAATCAACCACCGTAGCGTCACGACAGCAGATGCCGAGGACTCGATTTTAAGCCATCCGTGCGACGGCGCACACGGGAGGCCAACATGTGCCCCCGCCAGTGCAACAAACCCAAGCGGTTGTTGTTGCATGTGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGA

mRNA sequence

ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAGAAGGCGCATGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAAGCGTAACAAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGGGGACAATGTTCAAAGGGTCGACGTGACATTCCTCCCTCGCCCACCAACAGGAGGCGCGCAAGCTGAGATCGAGACGCGCGTCACGACAGCAGATGCCGAGGACTCGATTTTAAGCCATCCGTGCGACGGCGCACACGGGAGGCCAACATGTGCCCCCGCCAGTGCAACAAACCCAAGCGGTTGTTGTTGCATGTGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGA

Coding sequence (CDS)

ATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCACGCAGATGCCGAAGCACGCCAGAAGGCGCATGCTGCCAGCCACGATCGGGACGACGACGTCTCCACAAGCGTAACAAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCGCATCGGTCCATGCCCCAAGTCGATTGGCGGACTGGCTTACCACCTTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGCCGAGGGCGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTTCCCGCCTGACCTGGGGTCGCGTCGAGAGCATCGTCTTTGGGGACAATGTTCAAAGGGTCGACGTGACATTCCTCCCTCGCCCACCAACAGGAGGCGCGCAAGCTGAGATCGAGACGCGCGTCACGACAGCAGATGCCGAGGACTCGATTTTAAGCCATCCGTGCGACGGCGCACACGGGAGGCCAACATGTGCCCCCGCCAGTGCAACAAACCCAAGCGGTTGTTGTTGCATGTGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGA

Protein sequence

MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLNPHRSMPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSNAEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPPTGGAQAEIETRVTTADAEDSILSHPCDGAHGRPTCAPASATNPSGCCCMWGAAMRDAQADVPSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRESL
Homology
[Close]
BLAST of CmaCh00G005640 vs. TrEMBL
Match: A0A0A0KEK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 4.4e-89
Identity = 174/230 (75.65%), Postives = 180/230 (78.26%), Query Frame = 1 

Query: 63  MPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 122
           MPQVDWRTG  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 123 LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSN 182
           LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARS AEDASPDYNSN
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 183 AEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPPTG-----GA 242
            + ARFSSWALPGSLAVT+GILSRLTWGRVES+          V    R   G     G 
Sbjct: 121 VDDARFSSWALPGSLAVTRGILSRLTWGRVESV----------VPLRGRRSEGHAGVRGV 180

Query: 243 QAEIETR---------VTTADAEDSILSHPCDGAHGRPTCAPASATNPSG 279
             ++ETR         V T   EDS LSHP DGAHGRP CA A  T+P G
Sbjct: 181 HVKVETRHRGWINHRSVATTSVEDSNLSHPHDGAHGRPVCALARTTSPHG 220

[Close]
BLAST of CmaCh00G005640 vs. TrEMBL
Match: A0A072TKH6_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_0021s0160 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.5e-76
Identity = 190/346 (54.91%), Postives = 209/346 (60.40%), Query Frame = 1 

Query: 6   VRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGR---RRLHKRNKGLGFGRRLNP--- 65
           VR  R     A   +PG  RC + P G     R  R   RR  +  +  G      P   
Sbjct: 68  VRPVRASRSSASLRIPG--RCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTLPTTV 127

Query: 66  HRSMPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP 125
           H      D +    PF IR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP
Sbjct: 128 HTPSRAADQQE---PFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP 187

Query: 126 IFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDY 185
           +FSLG++LPPD GCIPKQPDSLTAPRGATGS  +GALTL GAPFQGT ARSVAEDASPDY
Sbjct: 188 VFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDY 247

Query: 186 NSNAEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPR-----PPT 245
           NS+   ARFSSWA+PGSLAVT+GIL      RV     G   +R  +  + R     P T
Sbjct: 248 NSDGTAARFSSWAVPGSLAVTRGIL------RVVPPDLGSRSKRRALRSMGRFEAMMPST 307

Query: 246 GGAQAEIETRVTTADAEDSILSHPCDGAHGRPTCAPASATNPSGCCCMWGAAMRDAQADV 305
                  + R  T              AH         A +      +     RDAQA V
Sbjct: 308 RRMHCIDKARTPTMRCVRRGTPAARSSAHRPLQDEGPYAASQFPKRVVGSVFWRDAQAGV 367

Query: 306 PSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRES 341
           PSA   RAQLAFKDS+VRGILQFTP IAFRYVLHRCESRDIRCRES
Sbjct: 368 PSAEWPRAQLAFKDSMVRGILQFTPGIAFRYVLHRCESRDIRCRES 402

[Close]
BLAST of CmaCh00G005640 vs. TrEMBL
Match: C4JBA4_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.9e-62
Identity = 140/208 (67.31%), Postives = 150/208 (72.12%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLN-- 60
           MSDSLVRVSRRV WGA RP+  +   R  PE    +PR  R     R  GL    R    
Sbjct: 1   MSDSLVRVSRRVGWGARRPLQRSAP-RGAPEARGYRPRRRRLPGAPRAPGLWPPARATTV 60

Query: 61  --PHRSMPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIG 120
             P RS  Q +      PF IR   +A PHPLPSRQFQALFDSLFKVLFIFPSRYLFAIG
Sbjct: 61  HAPSRSADQQE------PFRIRPVRVASPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIG 120

Query: 121 LSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDAS 180
           LSP+FSLG++LPPD GCIPKQPDSLTAPRGATGS  +GALTL G PFQ T ARSVAEDAS
Sbjct: 121 LSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGVPFQRTWARSVAEDAS 180

Query: 181 PDYNSNAEGARFSSWALPGSLAVTKGIL 205
           PDYNS  E ARFSSWA PGSLAVT+GIL
Sbjct: 181 PDYNSGGEAARFSSWAAPGSLAVTRGIL 201

[Close]
BLAST of CmaCh00G005640 vs. TrEMBL
Match: A0A072TTW3_MEDTR (Transmembrane protein, putative OS=Medicago truncatula GN=MTR_0055s0080 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.3e-61
Identity = 119/131 (90.84%), Postives = 122/131 (93.13%), Query Frame = 1 

Query: 74  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGC 133
           PFHIR  HI GPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLG+NLPPDWGC
Sbjct: 45  PFHIRPRHIVGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGRNLPPDWGC 104

Query: 134 IPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSNAEGARFSSWAL 193
           IPKQPDSLTAPRGATGSE NGALTLSGAPFQGT ARSVAEDASPDYNSNAEG RFS WA 
Sbjct: 105 IPKQPDSLTAPRGATGSEHNGALTLSGAPFQGTWARSVAEDASPDYNSNAEGDRFSWWAY 164

Query: 194 PGSLAVTKGIL 205
           PGSL++T GIL
Sbjct: 165 PGSLSITTGIL 175

[Close]
BLAST of CmaCh00G005640 vs. TrEMBL
Match: A0A0B2SF05_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046946 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.5e-60
Identity = 118/133 (88.72%), Postives = 122/133 (91.73%), Query Frame = 1 

Query: 72  LPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDW 131
           L PFHIR GHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP+FSLG+NLPPDW
Sbjct: 32  LSPFHIRPGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPVFSLGRNLPPDW 91

Query: 132 GCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSNAEGARFSSW 191
           GCIPKQPDS TAPRGATGS  +GALTLSGAPFQGT ARS  EDASPDYNS+AEG RFS W
Sbjct: 92  GCIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDAEGDRFSWW 151

Query: 192 ALPGSLAVTKGIL 205
           A PGSLAVTKGIL
Sbjct: 152 AFPGSLAVTKGIL 164

[Close]
BLAST of CmaCh00G005640 vs. NCBI nr
Match: gi|700192065|gb|KGN47269.1| (hypothetical protein Csa_6G239680 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 6.4e-89
Identity = 174/230 (75.65%), Postives = 180/230 (78.26%), Query Frame = 1 

Query: 63  MPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 122
           MPQVDWRTG  PFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS
Sbjct: 1   MPQVDWRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFS 60

Query: 123 LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDYNSN 182
           LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARS AEDASPDYNSN
Sbjct: 61  LGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSN 120

Query: 183 AEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPRPPTG-----GA 242
            + ARFSSWALPGSLAVT+GILSRLTWGRVES+          V    R   G     G 
Sbjct: 121 VDDARFSSWALPGSLAVTRGILSRLTWGRVESV----------VPLRGRRSEGHAGVRGV 180

Query: 243 QAEIETR---------VTTADAEDSILSHPCDGAHGRPTCAPASATNPSG 279
             ++ETR         V T   EDS LSHP DGAHGRP CA A  T+P G
Sbjct: 181 HVKVETRHRGWINHRSVATTSVEDSNLSHPHDGAHGRPVCALARTTSPHG 220

[Close]
BLAST of CmaCh00G005640 vs. NCBI nr
Match: gi|922327861|ref|XP_013443323.1| (hypothetical protein MTR_0021s0160 [Medicago truncatula])

HSP 1 Score: 294.7 bits (753), Expect = 2.1e-76
Identity = 190/346 (54.91%), Postives = 209/346 (60.40%), Query Frame = 1 

Query: 6   VRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGR---RRLHKRNKGLGFGRRLNP--- 65
           VR  R     A   +PG  RC + P G     R  R   RR  +  +  G      P   
Sbjct: 68  VRPVRASRSSASLRIPG--RCSAVPRGTRLSARGYRPCRRRQPEAPRAPGLWPPTLPTTV 127

Query: 66  HRSMPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP 125
           H      D +    PF IR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP
Sbjct: 128 HTPSRAADQQE---PFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSP 187

Query: 126 IFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAEDASPDY 185
           +FSLG++LPPD GCIPKQPDSLTAPRGATGS  +GALTL GAPFQGT ARSVAEDASPDY
Sbjct: 188 VFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASPDY 247

Query: 186 NSNAEGARFSSWALPGSLAVTKGILSRLTWGRVESIVFGDNVQRVDVTFLPR-----PPT 245
           NS+   ARFSSWA+PGSLAVT+GIL      RV     G   +R  +  + R     P T
Sbjct: 248 NSDGTAARFSSWAVPGSLAVTRGIL------RVVPPDLGSRSKRRALRSMGRFEAMMPST 307

Query: 246 GGAQAEIETRVTTADAEDSILSHPCDGAHGRPTCAPASATNPSGCCCMWGAAMRDAQADV 305
                  + R  T              AH         A +      +     RDAQA V
Sbjct: 308 RRMHCIDKARTPTMRCVRRGTPAARSSAHRPLQDEGPYAASQFPKRVVGSVFWRDAQAGV 367

Query: 306 PSARRLRAQLAFKDSVVRGILQFTPSIAFRYVLHRCESRDIRCRES 341
           PSA   RAQLAFKDS+VRGILQFTP IAFRYVLHRCESRDIRCRES
Sbjct: 368 PSAEWPRAQLAFKDSMVRGILQFTPGIAFRYVLHRCESRDIRCRES 402

[Close]
BLAST of CmaCh00G005640 vs. NCBI nr
Match: gi|848864188|ref|XP_012832849.1| (PREDICTED: uncharacterized protein LOC105953700 [Erythranthe guttata])

HSP 1 Score: 271.2 bits (692), Expect = 2.5e-69
Identity = 146/213 (68.54%), Postives = 158/213 (74.18%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRRLN-- 60
           MSDSLVRVSRRVEWGA  P PGAR CR TP          R R  + ++G G  R     
Sbjct: 1   MSDSLVRVSRRVEWGARWPAPGARSCRGTP----------RARAVRHDRGDGIPRAYQLL 60

Query: 61  -----PHRSMPQVDWRTG--LPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRY 120
                P  ++ +   R+     PFHIR   IAGPHPLPSRQFQALFDSLFKVLFIFPSRY
Sbjct: 61  GLWPPPQSALVRASSRSADRHSPFHIRPRRIAGPHPLPSRQFQALFDSLFKVLFIFPSRY 120

Query: 121 LFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSV 180
           LFAIGLSP+FSLG+NLPPDWGCIPKQPDS TAPRGATGS  NGALTLSGAPFQGT ARS 
Sbjct: 121 LFAIGLSPVFSLGRNLPPDWGCIPKQPDSPTAPRGATGSGHNGALTLSGAPFQGTWARSA 180

Query: 181 AEDASPDYNSNAEGARFSSWALPGSLAVTKGIL 205
           AEDASPDYNS+    RFSSWA+PGSLAVT+GIL
Sbjct: 181 AEDASPDYNSDDGAVRFSSWAIPGSLAVTRGIL 203

[Close]
BLAST of CmaCh00G005640 vs. NCBI nr
Match: gi|695081383|ref|XP_009388207.1| (PREDICTED: uncharacterized protein LOC103975022 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63
Identity = 145/215 (67.44%), Postives = 153/215 (71.16%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGRRRLHKRNKGLGFGRR---- 60
           MSDSLVRVSRRV WGAH PMP   R R  P G       G R +  R  G+    R    
Sbjct: 1   MSDSLVRVSRRVGWGAHWPMP---RSRVYPAGHA----DGARHVLDRIDGIPSNERSVRA 60

Query: 61  -------LNPHRSMPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPS 120
                  ++PH   P+           IR   IAGPHPLPSRQFQALFDSLFKVLFIFPS
Sbjct: 61  SAVDAARIDPH---PEPSGGPANRRSAIRPRCIAGPHPLPSRQFQALFDSLFKVLFIFPS 120

Query: 121 RYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCAR 180
           RYLFAIGLSPIFSLG+NLPPDWGCIPKQPDS TAPRGATGSE +GALTL GAPFQGT AR
Sbjct: 121 RYLFAIGLSPIFSLGRNLPPDWGCIPKQPDSSTAPRGATGSEPDGALTLPGAPFQGTWAR 180

Query: 181 SVAEDASPDYNSNAEGARFSSWALPGSLAVTKGIL 205
           SVAEDASPDYNS+   ARFSSWA PGSLAVTKGIL
Sbjct: 181 SVAEDASPDYNSDDVAARFSSWADPGSLAVTKGIL 205

[Close]
BLAST of CmaCh00G005640 vs. NCBI nr
Match: gi|721688719|ref|XP_010239583.1| (PREDICTED: uncharacterized protein LOC104585233 [Brachypodium distachyon])

HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62
Identity = 142/210 (67.62%), Postives = 150/210 (71.43%), Query Frame = 1 

Query: 1   MSDSLVRVSRRVEWGAHRPMPGARRCRSTPEGACCQPRSGR---RRLHKRNKGLGFGRRL 60
           MSDSLVRVSRRV WGA        RC + P G     R  R   RR     K  G G   
Sbjct: 1   MSDSLVRVSRRVGWGARS------RCSAVPRGTRLAARGYRPCQRRPPGAPKDPGLGPPA 60

Query: 61  NP---HRSMPQVDWRTGLPPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFA 120
            P   H      D +    PF IR G IAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFA
Sbjct: 61  RPTTVHAPSRAADQQK---PFRIRPGRIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFA 120

Query: 121 IGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSVAED 180
           IGLSP+FSLG++LPPD GCIPKQPDSLTAPRGATGS  +GALTL GAPFQGT ARSVAED
Sbjct: 121 IGLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAED 180

Query: 181 ASPDYNSNAEGARFSSWALPGSLAVTKGIL 205
           ASPDYNS+   ARFSSWA PGSLAVT+GIL
Sbjct: 181 ASPDYNSDGTAARFSSWAAPGSLAVTRGIL 201

The following BLAST results are available for this feature:
BLAST of CmaCh00G005640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh00G005640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEK9_CUCSA4.4e-8975.65Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1[more]
A0A072TKH6_MEDTR1.5e-7654.91Uncharacterized protein OS=Medicago truncatula GN=MTR_0021s0160 PE=4 SV=1[more]
C4JBA4_MAIZE7.9e-6267.31Uncharacterized protein OS=Zea mays PE=2 SV=1[more]
A0A072TTW3_MEDTR2.3e-6190.84Transmembrane protein, putative OS=Medicago truncatula GN=MTR_0055s0080 PE=4 SV=... [more]
A0A0B2SF05_GLYSO1.5e-6088.72Uncharacterized protein OS=Glycine soja GN=glysoja_046946 PE=4 SV=1[more]
BLAST of CmaCh00G005640 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh00G005640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700192065|gb|KGN47269.1|6.4e-8975.65hypothetical protein Csa_6G239680 [Cucumis sativus][more]
gi|922327861|ref|XP_013443323.1|2.1e-7654.91hypothetical protein MTR_0021s0160 [Medicago truncatula][more]
gi|848864188|ref|XP_012832849.1|2.5e-6968.54PREDICTED: uncharacterized protein LOC105953700 [Erythranthe guttata][more]
gi|695081383|ref|XP_009388207.1|2.7e-6367.44PREDICTED: uncharacterized protein LOC103975022 [Musa acuminata subsp. malaccens... [more]
gi|721688719|ref|XP_010239583.1|1.0e-6267.62PREDICTED: uncharacterized protein LOC104585233 [Brachypodium distachyon][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G005640.1CmaCh00G005640.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33047FAMILY NOT NAMEDcoord: 72..212
score: 1.1
NoneNo IPR availablePANTHERPTHR33047:SF4SUBFAMILY NOT NAMEDcoord: 72..212
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G005640Watermelon (97103) v2cmawmbB012
CmaCh00G005640Cucurbita maxima (Rimu)cmacmaB023
CmaCh00G005640Cucurbita moschata (Rifu)cmacmoB026
CmaCh00G005640Melon (DHL92) v3.5.1cmameB009
CmaCh00G005640Watermelon (Charleston Gray)cmawcgB006
CmaCh00G005640Cucurbita pepo (Zucchini)cmacpeB014