CmaCh00G005470 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh00G005470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	C2H2 zinc finger protein
Location	Cma_Chr00 : 39096590 .. 39097051 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTGGCAAGCAGGGGAGATGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAACGGCCTTATGAGTGCACATTTTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCATATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACACCGCACCTCTTCCTCCCATTCTAACCACCAAATTTTCCCTCATCTGTCAACCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGTCGAACTTCCCGATTCACCAACAGAGATCGGAGAGTGTGAGTGAAGAGCTGCTGCTGGGGGCAAATCTTAGCCTCCAAGTTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGGTTGATTTGGAGCTGCGATTAGGGCATGAATATCGCTGA

mRNA sequence

ATGGATTTTGGCAAGCAGGGGAGATGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAACGGCCTTATGAGTGCACATTTTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCATATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACACCGCACCTCTTCCTCCCATTCTAACCACCAAATTTTCCCTCATCTGTCAACCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGTCGAACTTCCCGATTCACCAACAGAGATCGGAGAGTGTGAGTGAAGAGCTGCTGCTGGGGGCAAATCTTAGCCTCCAAGTTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGGTTGATTTGGAGCTGCGATTAGGGCATGAATATCGCTGA

Coding sequence (CDS)

ATGGATTTTGGCAAGCAGGGGAGATGGGACAGTTGGAGCGACGAATATGAGCACCAAAAGGACGAGGAGTTGGATAATGATAGCACAAAACGGCCTTATGAGTGCACATTTTGTAAGCGTGGGTTCACCAACGCACAAGCTCTTGGTGGCCATATGAACATCCACCGCAAAGACAGAGCCAAAGCCAAACACCGCACCTCTTCCTCCCATTCTAACCACCAAATTTTCCCTCATCTGTCAACCCAACCCACTGCCCCTCTACCACCCTCTTACCGGATGTATTTCGACACGACGGCGGCGGCCATGGCGTCGAACTTCCCGATTCACCAACAGAGATCGGAGAGTGTGAGTGAAGAGCTGCTGCTGGGGGCAAATCTTAGCCTCCAAGTTGATCAAAACAGGGGTGTGTGGAAAAATGAAGAGGTTGATTTGGAGCTGCGATTAGGGCATGAATATCGCTGA

Protein sequence

MDFGKQGRWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRTSSSHSNHQIFPHLSTQPTAPLPPSYRMYFDTTAAAMASNFPIHQQRSESVSEELLLGANLSLQVDQNRGVWKNEEVDLELRLGHEYR

Homology

[Close]

BLAST of CmaCh00G005470 vs. Swiss-Prot
Match: TAC1_ARATH (Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 5.5e-08
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 1


Query: 10 DSWSDEYEHQKDEELDND-STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR 66
          D  SD       + +D+  +  R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Sbjct: 11 DDCSDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67

[Close]

BLAST of CmaCh00G005470 vs. Swiss-Prot
Match: RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 9.4e-08
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 1


Query: 31 RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRTSSSHSNHQIFP 78
          R Y C+FC R F +AQALGGHMN+HR+DRA+ K ++ S  S  Q  P
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATP 99

[Close]

BLAST of CmaCh00G005470 vs. Swiss-Prot
Match: SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07
Identity = 41/112 (36.61%), Postives = 57/112 (50.89%), Query Frame = 1


Query: 3   FGKQGRWDSWS----DEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKD 62
           F  + R   WS    D  +   D  L      R Y C+FCKR F +AQALGGHMN+HR+D
Sbjct: 13  FYGRARTSPWSYGDYDNCQQDHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRD 72

Query: 63  RAKAKHRTSSSHSNHQIFPHLSTQPTAPLP-PSYRMYFDTTAAAMASNFPIH 110
           RA+ + + S         P  S+ P+ P P P+Y      + + MA++ P H
Sbjct: 73  RARLRLQQS---------PSSSSTPSPPYPNPNY------SYSTMANSPPPH 109

[Close]

BLAST of CmaCh00G005470 vs. Swiss-Prot
Match: ZFP8_ARATH (Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.0e-06
Identity = 24/57 (42.11%), Postives = 39/57 (68.42%), Query Frame = 1


Query: 17  EHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRTSSSHSNH 74
           E  KD++ DN++ +R +EC +C R F  +QALGGH N H+++R  AK  + +S+ +H
Sbjct: 80  EKDKDKDKDNNNNRR-FECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHH 135

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BLAST of CmaCh00G005470 vs. TrEMBL
Match: A0A0A0L4H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141860 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.9e-41
Identity = 100/153 (65.36%), Postives = 111/153 (72.55%), Query Frame = 1


Query: 1   MDFGKQGRWDSWSDEYE-----HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQG WDS SDEYE     H KD++ +ND TKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKHR-----TSSSHSNHQIF--PHLSTQPTAPL------PPSYRMYFDTTAAAM 120
           RKDRAKAKHR     +SS+HSNH  F  P + TQPT P       PPSYRMYFDT     
Sbjct: 61  RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTA---- 120

Query: 121 ASNFPIHQQ-RSESVSEELLLGANLSLQVDQNR 135
           A+NFPIH Q  S +V  + LLGANLSL++DQ R
Sbjct: 121 ATNFPIHPQITSPAVVNQELLGANLSLEIDQTR 149

[Close]

BLAST of CmaCh00G005470 vs. TrEMBL
Match: A0A061ENL3_THECC (C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=TCM_020819 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-24
Identity = 83/180 (46.11%), Postives = 104/180 (57.78%), Query Frame = 1


Query: 1   MDFGKQGRWDSWSDEYEHQKDEELDNDST-KRPYECTFCKRGFTNAQALGGHMNIHRKDR 60
           M+ GKQG  D+ S+E +     + D  +T KR YECTFCKRGFTNAQALGGHMNIHRKDR
Sbjct: 1   MESGKQGSSDASSEENDRVDRVKGDTAATTKRSYECTFCKRGFTNAQALGGHMNIHRKDR 60

Query: 61  AKAKHRTSSS---------HSNHQIFPHLSTQPTAPLP-----PSYRMYFDTTAAAMASN 120
           AKAK  TSSS         + N    P +ST+P    P      +Y MY     ++    
Sbjct: 61  AKAKQPTSSSVPSEPMNEDYMNPGYLPPISTEPPKYYPVLEAQRNYHMYLQPPVSSPTLP 120

Query: 121 FPIHQQ------RSESVS-EELLLGANLSLQV--------DQNRGVWKNEEVDLELRLGH 151
           +  ++       RS+S+S  E LLGANLSLQ+        +  RG+ K +EVDLELRLGH
Sbjct: 121 YGYYESDFLVPARSQSLSMNEELLGANLSLQIGPTHVDDREVRRGIIKEDEVDLELRLGH 180

[Close]

BLAST of CmaCh00G005470 vs. TrEMBL
Match: A0A067KVZ0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02290 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21
Identity = 80/192 (41.67%), Postives = 106/192 (55.21%), Query Frame = 1


Query: 1   MDFGKQGRWDSWSDEYEHQKDEELDNDST----KRPYECTFCKRGFTNAQALGGHMNIHR 60
           M  GKQG  +S SDE    + EE   ++T    KR YECTFC+RGFTNAQALGGHMNIHR
Sbjct: 1   MGSGKQGSSESSSDENNKDQQEEQVKETTISSSKRSYECTFCRRGFTNAQALGGHMNIHR 60

Query: 61  KDRAKAK-----HRTSSSHSNHQIFPH----LSTQPTAPLP------PSYRMYFDTTAAA 120
           KDRAK K     +  SS  +   I P+    +S++P    P        + MYF  +  +
Sbjct: 61  KDRAKTKQVSGSNSISSKINEEDINPNHVRSISSEPINHCPVIEAQKNYHPMYFQASRGS 120

Query: 121 M-----------ASNFPIHQQRSESVSEELLLGANLSLQVDQN----------RGVWKNE 153
                       AS+F + + +S S+++E L GANLSLQ+  N          + V K +
Sbjct: 121 SSIPMDAHGYYHASDFLVSKNQSLSLNDEQLWGANLSLQIGSNNLEENNETISKEVSKED 180

[Close]

BLAST of CmaCh00G005470 vs. TrEMBL
Match: A0A0D2UUB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G172000 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21
Identity = 76/167 (45.51%), Postives = 99/167 (59.28%), Query Frame = 1


Query: 4   GKQGRWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 63
           GK+G  D+ S+E E  + +     +TKR YECTFCKRGFTNAQALGGHMNIHRKDRAKAK
Sbjct: 5   GKRGSSDASSEENEDDQVKCHTGATTKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAK 64

Query: 64  HRTSSS--HSNHQIFPHLST-QPT-------APLPPSYRMYFDTTAAAMASNFPIHQQRS 123
             TSS+    N +  P + T +P+       A    ++ MYF    ++    +   +  S
Sbjct: 65  QPTSSAVLSMNPRYAPTIPTYEPSRHHPIVEAQTQTNHHMYFKPPLSSPRLPYAPARSPS 124

Query: 124 ESVSEELLLGANLSLQVD---------QNRGVWKNEEVDLELRLGHE 152
            S++EE LL AN SLQ+D           +G+ K  EVDLELRLGH+
Sbjct: 125 LSINEE-LLNANFSLQIDPTKVDENEMTRKGIMKEGEVDLELRLGHD 170

[Close]

BLAST of CmaCh00G005470 vs. TrEMBL
Match: A0A0L9TYD1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g169500 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 5.7e-20
Identity = 76/170 (44.71%), Postives = 99/170 (58.24%), Query Frame = 1


Query: 10  DSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRT--- 69
           ++ SDE + ++ ++ D   TKR YECTFCKRGFTNAQALGGHMNIHRKDRAKAK  T   
Sbjct: 10  ENLSDENDQEEAQD-DTGGTKRSYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQFTLDA 69

Query: 70  ---SSSHSNHQ--IFPHLS-------TQPTAPLPPSYR---MYFDTTAAAMASNFPIHQQ 129
               +  ++H+  +FP +S        +P   +  S R    +F   A A A  +  ++ 
Sbjct: 70  SPSINKFNSHESIVFPFVSETLNQQHARPNYSVLESQRNCDKHFHPPAPASAFYYEFYES 129

Query: 130 RSESVS-EELLLGANLSLQ----------VDQNRGVWKNEEVDLELRLGH 151
           RS S+S  + L GANLSLQ          + Q RG  K+ EVDLELRLGH
Sbjct: 130 RSRSLSLNQELRGANLSLQIGPSHHVGDDIHQVRGNQKDSEVDLELRLGH 178

[Close]

BLAST of CmaCh00G005470 vs. TAIR10
Match: AT5G43540.1 (AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 3.9e-12
Identity = 50/125 (40.00%), Postives = 64/125 (51.20%), Query Frame = 1


Query: 29  TKRPYECTFCKRGFTNAQALGGHMNIHRKDRA-KAKHRTSSS---HSNHQIFPHLSTQPT 88
           T+R YECTFCKRGFTNAQALGGHMNIHR+DR  KAK +  +       H+ F H+++   
Sbjct: 31  TRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAKVQNDADVALSQTHRCF-HVASD-- 90

Query: 89  APLPPSYRMYFDTTAAAMASNFPIHQQRSESVSEELLLGANLSLQVDQNRGVWKNEEVDL 148
                 Y            SN+  H          L +G   S+   +   V +  E+DL
Sbjct: 91  ---LGGYEQVDSVVLRTTTSNYIQH----------LRIG---SMATRRENVVVEGNEIDL 136

Query: 149 ELRLG 150
           ELRLG
Sbjct: 151 ELRLG 136

[Close]

BLAST of CmaCh00G005470 vs. TAIR10
Match: AT3G23140.1 (AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 62.0 bits (149), Expect = 3.7e-10
Identity = 35/82 (42.68%), Postives = 49/82 (59.76%), Query Frame = 1


Query: 18 HQKDEELDNDS----TKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRTSSSHSNH 77
          + +D+++D+ S     +R Y+C  CKRGFTN QALGGH NIHR++R +    +SSSHS  
Sbjct: 2  NHRDKQIDSGSGSGENRRTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFP 61

Query: 78 QIFPHLSTQPTAPL----PPSY 92
             P  S  P++      PP Y
Sbjct: 62 FSLPLPSQSPSSSTNFTNPPPY 83

[Close]

BLAST of CmaCh00G005470 vs. TAIR10
Match: AT3G53820.1 (AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.8e-10
Identity = 43/124 (34.68%), Postives = 57/124 (45.97%), Query Frame = 1


Query: 28  STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRTSSSHSNHQIFPHLSTQPTAPL 87
           S  RPY C FC+RGF+NAQALGGHMNIHRKDRAK +        +       S       
Sbjct: 16  SQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQANLKEEDSEDAICTTSRNRFGQE 75

Query: 88  PPSYRMYFDTTAAAMASNFPIHQQRSESVSEELLLG--ANLSLQVDQNRGVWKNEEVDLE 147
                 + DT            +++ E    E  LG     ++++ Q       + +DLE
Sbjct: 76  LIELPFFVDTVGP---------RRKGEDDKSEKGLGDEEKKNMRILQKALSQSADVIDLE 130

Query: 148 LRLG 150
           LRLG
Sbjct: 136 LRLG 130

[Close]

BLAST of CmaCh00G005470 vs. TAIR10
Match: AT3G09290.1 (AT3G09290.1 telomerase activator1)

HSP 1 Score: 58.9 bits (141), Expect = 3.1e-09
Identity = 29/57 (50.88%), Postives = 38/57 (66.67%), Query Frame = 1


Query: 10 DSWSDEYEHQKDEELDND-STKRPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHR 66
          D  SD       + +D+  +  R Y C+FC RGF+NAQALGGHMNIHR+DRAK + +
Sbjct: 11 DDCSDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67

[Close]

BLAST of CmaCh00G005470 vs. TAIR10
Match: AT5G06070.1 (AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 5.3e-09
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 1


Query: 31 RPYECTFCKRGFTNAQALGGHMNIHRKDRAKAKHRTSSSHSNHQIFP 78
          R Y C+FC R F +AQALGGHMN+HR+DRA+ K ++ S  S  Q  P
Sbjct: 53 RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQATP 99

[Close]

BLAST of CmaCh00G005470 vs. NCBI nr
Match: gi|659077747|ref|XP_008439363.1| (PREDICTED: zinc finger protein 7 [Cucumis melo])

HSP 1 Score: 215.7 bits (548), Expect = 5.6e-53
Identity = 119/173 (68.79%), Postives = 130/173 (75.14%), Query Frame = 1


Query: 1   MDFGKQGRWDSWSDEYE------HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNI 60
           MDFGKQG WDS SDEYE      H KD++ +ND TKRPYECTFCKRGFTNAQALGGHMNI
Sbjct: 1   MDFGKQGSWDSSSDEYEPQDHHIHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNI 60

Query: 61  HRKDRAKAKHR-----TSSSHSNHQIF--PHLSTQPTAPL------PPSYRMYFDTTAAA 120
           HRKDRAKAKHR     +SS+HSNH  F  P + TQPT P       PPSYRMYFDT    
Sbjct: 61  HRKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYHHPPPPSYRMYFDTA--- 120

Query: 121 MASNFPIHQQ-RSESVSEELLLGANLSLQVDQNRGVWKNEEVDLELRLGHEYR 154
            A+NFPIH Q  S +V  + LLGANLSLQ+DQNRGVW NEE+DLELRLGHEYR
Sbjct: 121 -ATNFPIHPQITSPAVVNQELLGANLSLQIDQNRGVWNNEELDLELRLGHEYR 169

[Close]

BLAST of CmaCh00G005470 vs. NCBI nr
Match: gi|778688456|ref|XP_004134420.2| (PREDICTED: zinc finger protein KNUCKLES-like [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 3.1e-51
Identity = 118/173 (68.21%), Postives = 130/173 (75.14%), Query Frame = 1


Query: 1   MDFGKQGRWDSWSDEYE-----HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQG WDS SDEYE     H KD++ +ND TKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKHR-----TSSSHSNHQIF--PHLSTQPTAPL------PPSYRMYFDTTAAAM 120
           RKDRAKAKHR     +SS+HSNH  F  P + TQPT P       PPSYRMYFDT     
Sbjct: 61  RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTA---- 120

Query: 121 ASNFPIHQQ-RSESVSEELLLGANLSLQVDQNRGV-WKNEEVDLELRLGHEYR 154
           A+NFPIH Q  S +V  + LLGANLSL++DQ RGV WKNEE+DLELRLGHEYR
Sbjct: 121 ATNFPIHPQITSPAVVNQELLGANLSLEIDQTRGVSWKNEELDLELRLGHEYR 169

[Close]

BLAST of CmaCh00G005470 vs. NCBI nr
Match: gi|700201757|gb|KGN56890.1| (hypothetical protein Csa_3G141860 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 8.4e-41
Identity = 100/153 (65.36%), Postives = 111/153 (72.55%), Query Frame = 1


Query: 1   MDFGKQGRWDSWSDEYE-----HQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIH 60
           MDFGKQG WDS SDEYE     H KD++ +ND TKRPYECTFCKRGFTNAQALGGHMNIH
Sbjct: 1   MDFGKQGSWDSSSDEYESQDHVHLKDDDNENDPTKRPYECTFCKRGFTNAQALGGHMNIH 60

Query: 61  RKDRAKAKHR-----TSSSHSNHQIF--PHLSTQPTAPL------PPSYRMYFDTTAAAM 120
           RKDRAKAKHR     +SS+HSNH  F  P + TQPT P       PPSYRMYFDT     
Sbjct: 61  RKDRAKAKHRNFIHSSSSTHSNHDQFFPPIIPTQPTTPSYYNHPPPPSYRMYFDTA---- 120

Query: 121 ASNFPIHQQ-RSESVSEELLLGANLSLQVDQNR 135
           A+NFPIH Q  S +V  + LLGANLSL++DQ R
Sbjct: 121 ATNFPIHPQITSPAVVNQELLGANLSLEIDQTR 149

[Close]

BLAST of CmaCh00G005470 vs. NCBI nr
Match: gi|590659105|ref|XP_007035036.1| (C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao])

HSP 1 Score: 119.0 bits (297), Expect = 7.2e-24
Identity = 83/180 (46.11%), Postives = 104/180 (57.78%), Query Frame = 1


Query: 1   MDFGKQGRWDSWSDEYEHQKDEELDNDST-KRPYECTFCKRGFTNAQALGGHMNIHRKDR 60
           M+ GKQG  D+ S+E +     + D  +T KR YECTFCKRGFTNAQALGGHMNIHRKDR
Sbjct: 1   MESGKQGSSDASSEENDRVDRVKGDTAATTKRSYECTFCKRGFTNAQALGGHMNIHRKDR 60

Query: 61  AKAKHRTSSS---------HSNHQIFPHLSTQPTAPLP-----PSYRMYFDTTAAAMASN 120
           AKAK  TSSS         + N    P +ST+P    P      +Y MY     ++    
Sbjct: 61  AKAKQPTSSSVPSEPMNEDYMNPGYLPPISTEPPKYYPVLEAQRNYHMYLQPPVSSPTLP 120

Query: 121 FPIHQQ------RSESVS-EELLLGANLSLQV--------DQNRGVWKNEEVDLELRLGH 151
           +  ++       RS+S+S  E LLGANLSLQ+        +  RG+ K +EVDLELRLGH
Sbjct: 121 YGYYESDFLVPARSQSLSMNEELLGANLSLQIGPTHVDDREVRRGIIKEDEVDLELRLGH 180

[Close]

BLAST of CmaCh00G005470 vs. NCBI nr
Match: gi|1009141004|ref|XP_015887958.1| (PREDICTED: transcriptional regulator SUPERMAN-like [Ziziphus jujuba])

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-22
Identity = 91/203 (44.83%), Postives = 106/203 (52.22%), Query Frame = 1


Query: 1   MDFGKQ--GRWDSWSDEYEHQKDEELDNDSTKRPYECTFCKRGFTNAQALGGHMNIHRKD 60
           MD GKQ  G  DS S E    + E+   D  KR YECTFCKRGFTNAQALGGHMNIHRKD
Sbjct: 1   MDSGKQQQGSSDSTSSEENEYRSEKQVKD-LKRCYECTFCKRGFTNAQALGGHMNIHRKD 60

Query: 61  RA---KAKHRTSSSHSNH-QIFPHLSTQPTAPLPPSY--------------RMYFDTTAA 120
           RA   KAKH+T SS S+H QI  +   Q  +   P Y               MYF+++ +
Sbjct: 61  RAAANKAKHQTGSSTSSHGQI--NSEDQSLSMAAPRYYPAMESANRNSYYPHMYFESSGS 120

Query: 121 AMASNFP---------------IHQQRSES---------VSEELLLGANLSLQVDQ---- 152
           A ASNFP               I   RS S            E L+GANLSL++D     
Sbjct: 121 AGASNFPYNNSYYSIDDGGHSFIGSSRSSSSQTAAAAALTMNEELMGANLSLRIDSAIWE 180

The following BLAST results are available for this feature:

BLAST of CmaCh00G005470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TAC1_ARATH	5.5e-08	50.88	Transcriptional regulator TAC1 OS=Arabidopsis thaliana GN=TAC1 PE=2 SV=1	[more]
RBE_ARATH	9.4e-08	55.32	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE...	[more]
SUP_ARATH	2.7e-07	36.61	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1	[more]
ZFP8_ARATH	4.0e-06	42.11	Zinc finger protein 8 OS=Arabidopsis thaliana GN=ZFP8 PE=2 SV=1	[more]

BLAST of CmaCh00G005470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4H6_CUCSA	5.9e-41	65.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141860 PE=4 SV=1	[more]
A0A061ENL3_THECC	5.0e-24	46.11	C2H2 and C2HC zinc fingers superfamily protein, putative OS=Theobroma cacao GN=T...	[more]
A0A067KVZ0_JATCU	1.4e-21	41.67	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02290 PE=4 SV=1	[more]
A0A0D2UUB9_GOSRA	1.4e-21	45.51	Uncharacterized protein OS=Gossypium raimondii GN=B456_011G172000 PE=4 SV=1	[more]
A0A0L9TYD1_PHAAN	5.7e-20	44.71	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g169500 PE=4 SV=1	[more]

BLAST of CmaCh00G005470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G43540.1	3.9e-12	40.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23140.1	3.7e-10	42.68	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G53820.1	4.8e-10	34.68	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G09290.1	3.1e-09	50.88	telomerase activator1	[more]
AT5G06070.1	5.3e-09	55.32	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of CmaCh00G005470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659077747\|ref\|XP_008439363.1\|	5.6e-53	68.79	PREDICTED: zinc finger protein 7 [Cucumis melo]	[more]
gi\|778688456\|ref\|XP_004134420.2\|	3.1e-51	68.21	PREDICTED: zinc finger protein KNUCKLES-like [Cucumis sativus]	[more]
gi\|700201757\|gb\|KGN56890.1\|	8.4e-41	65.36	hypothetical protein Csa_3G141860 [Cucumis sativus]	[more]
gi\|590659105\|ref\|XP_007035036.1\|	7.2e-24	46.11	C2H2 and C2HC zinc fingers superfamily protein, putative [Theobroma cacao]	[more]
gi\|1009141004\|ref\|XP_015887958.1\|	1.8e-22	44.83	PREDICTED: transcriptional regulator SUPERMAN-like [Ziziphus jujuba]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G005470.1	CmaCh00G005470.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh00G005470	Cla021551	Watermelon (97103) v1	cmawmB001
CmaCh00G005470	Csa3G141860	Cucumber (Chinese Long) v2	cmacuB002
CmaCh00G005470	MELO3C006452	Melon (DHL92) v3.5.1	cmameB002
CmaCh00G005470	CSPI03G12280	Wild cucumber (PI 183967)	cmacpiB002
CmaCh00G005470	CmoCh14G018290	Cucurbita moschata (Rifu)	cmacmoB011
CmaCh00G005470	CmoCh06G013470	Cucurbita moschata (Rifu)	cmacmoB020
CmaCh00G005470	Lsi05G016950	Bottle gourd (USVL1VR-Ls)	cmalsiB009
CmaCh00G005470	Cp4.1LG08g03600	Cucurbita pepo (Zucchini)	cmacpeB020
CmaCh00G005470	MELO3C006452.2	Melon (DHL92) v3.6.1	cmamedB004
CmaCh00G005470	CsaV3_3G012400	Cucumber (Chinese Long) v3	cmacucB0005
CmaCh00G005470	Cla97C05G085430	Watermelon (97103) v2	cmawmbB004
CmaCh00G005470	CsGy3G012410	Cucumber (Gy14) v2	cgybcmaB277
CmaCh00G005470	Carg16575	Silver-seed gourd	carcmaB0324
CmaCh00G005470	Carg06205	Silver-seed gourd	carcmaB1317

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh00G005470	CmaCh14G017920	Cucurbita maxima (Rimu)	cmacmaB012

The following block(s) are covering this gene:

None