CmaCh00G005230 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh00G005230
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRibosomal protein small subunit 7
LocationCma_Chr00 : 37912024 .. 37912470 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

mRNA sequence

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Coding sequence (CDS)

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGAACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGACGCCGTAGACAATATAAAGCCCATATGCGAAGTCGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTCCCTGGGATTGTAGCCAGGGATCGTCAACAAACCTTAGCTATTCGTTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTACAGGATAAGCTTAGAGAAATGTTCATTTGCTGAGATACTTGATGCTTACCGAAAGAGGGGAATTGCACGTCAGAAAAGGGAGAATCTTCATAGACTGGCTTCCACCAATCGAAGTTTCGCGCATTTCAGATGGTGGTAA

Protein sequence

MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARQKRENLHRLASTNRSFAHFRWW
Homology
[Close]
BLAST of CmaCh00G005230 vs. Swiss-Prot
Match: RT07_ARATH (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-73
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRG AR+KRENLH LASTNRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. Swiss-Prot
Match: RT07_WHEAT (Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 6.4e-70
Identity = 134/148 (90.54%), Postives = 141/148 (95.27%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MG  DGEQK+LIKKLVNFRM +GKRTRVRAIVY+TFHR A+TERDVIKLMVDAVDNIKPI
Sbjct: 1   MGDFDGEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWIL AAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGI+R++RENLH LASTNRSFAHFRWW
Sbjct: 121 KRGISRKRRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. Swiss-Prot
Match: RT07_BETVU (Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 7.1e-69
Identity = 132/148 (89.19%), Postives = 139/148 (93.92%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNF MKEGKRT+VRAIVYQTFHR A+TE DVIKLM+DAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           C+VEKV VAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC F EILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGI+R+KRENLH LAS NRSFAHFRWW
Sbjct: 121 KRGISRKKRENLHGLASANRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. Swiss-Prot
Match: RT07_MARPO (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 4.6e-44
Identity = 91/147 (61.90%), Postives = 123/147 (83.67%), Query Frame = 1 

Query: 3   GLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICE 62
           GL+G+QKQLIKKLV+  M +GK+TR RAIVY+TFHR A    DVIKL+V+A++N+KPICE
Sbjct: 85  GLNGKQKQLIKKLVHICMIDGKKTRSRAIVYKTFHRLAP-HGDVIKLLVNAIENVKPICE 144

Query: 63  VEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYR-ISLEKCSFAEILDAYRK 122
           V+KV ++GT   VP I+A +RQ+TLAIRW+LE+A KRR+  + ISL++C +AEIL+A +K
Sbjct: 145 VKKVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRRMGKKSISLDQCLYAEILEASQK 204

Query: 123 RGIARQKRENLHRLASTNRSFAHFRWW 149
            GIAR+KR++LH+LA  NRSF+H+RWW
Sbjct: 205 MGIARKKRDDLHKLAEANRSFSHYRWW 230

[Close]
BLAST of CmaCh00G005230 vs. Swiss-Prot
Match: RS7_PELUB (30S ribosomal protein S7 OS=Pelagibacter ubique (strain HTCC1062) GN=rpsG PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-21
Identity = 55/138 (39.86%), Postives = 86/138 (62.32%), Query Frame = 1 

Query: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PAQTERDVIKLMVDAVDNIKPICEVEKVGVA 70
           +I KL+N  M +GK+     IVY+   +  ++T+ + I +  +A++NIKP  EV    V 
Sbjct: 22  IIPKLINSIMYDGKKVVAEKIVYEAIEKIKSKTKEEPINVFNEAINNIKPTVEVRSRRVG 81

Query: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYRKRGIARQKR 130
           G  Y VP  V   R Q LAIRW+++A+ KR+  +   +    F E+ DAY K+G A +KR
Sbjct: 82  GATYQVPVEVKTKRAQALAIRWLVDASRKRKDKH---MSDKIFNELYDAYEKKGSAVKKR 141

Query: 131 ENLHRLASTNRSFAHFRW 148
           E++H++A +N++FAHFRW
Sbjct: 142 EDVHKMAESNKAFAHFRW 156

[Close]
BLAST of CmaCh00G005230 vs. TrEMBL
Match: A0A142BZ01_ZIZJJ (Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.6e-75
Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLHRLASTNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. TrEMBL
Match: A0A0M4R6T5_CANSA (Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 6.0e-75
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLHRLASTNR FAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRRFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. TrEMBL
Match: D5I3F4_CUCPE (Ribosomal protein S7 OS=Cucurbita pepo GN=rps7 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.3e-74
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIARQKRENLHRLASTNRSFAHFRWW
Sbjct: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. TrEMBL
Match: D5I3C7_CITLA (Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.1e-73
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLHRLASTNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. TrEMBL
Match: A0A0M4MPL4_9MAGN (Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-73
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLH LASTNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. TAIR10
Match: AT2G07696.1 (AT2G07696.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 276.9 bits (707), Expect = 7.0e-75
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRG AR+KRENLH LASTNRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. TAIR10
Match: ATMG01270.1 (ATMG01270.1 mitochondrial ribosomal protein S7)

HSP 1 Score: 276.9 bits (707), Expect = 7.0e-75
Identity = 140/148 (94.59%), Postives = 144/148 (97.30%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRG AR+KRENLH LASTNRSFAHFRWW
Sbjct: 121 KRGSARRKRENLHGLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-13
Identity = 46/143 (32.17%), Postives = 82/143 (57.34%), Query Frame = 1 

Query: 8   QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKV 67
           + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 68  GVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFAEILDAYRKRG 127
            V G+ + VP  +   + + LAIRW+L A+ KR    +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 128 IARQKRENLHRLASTNRSFAHFR 147
            A +K+E  HR+A  NR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh00G005230 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-13
Identity = 46/143 (32.17%), Postives = 82/143 (57.34%), Query Frame = 1 

Query: 8   QKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKV 67
           + +L+  LVN  +K GK++    I+Y+   +  Q TE + + ++  A+  + P   V+  
Sbjct: 19  RNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKAR 78

Query: 68  GVAGTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFAEILDAYRKRG 127
            V G+ + VP  +   + + LAIRW+L A+ KR    +++++S      +E++DA +  G
Sbjct: 79  RVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSG 138

Query: 128 IARQKRENLHRLASTNRSFAHFR 147
            A +K+E  HR+A  NR+FAHFR
Sbjct: 139 DAIRKKEETHRMAEANRAFAHFR 155

[Close]
BLAST of CmaCh00G005230 vs. NCBI nr
Match: gi|1016470801|ref|YP_009241662.1| (ribosomal protein S7 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 290.0 bits (741), Expect = 2.3e-75
Identity = 146/148 (98.65%), Postives = 148/148 (100.00%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLHRLASTNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. NCBI nr
Match: gi|1016880331|ref|YP_009243658.1| (ribosomal protein S7 (mitochondrion) [Cannabis sativa])

HSP 1 Score: 288.1 bits (736), Expect = 8.7e-75
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLHRLASTNR FAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRRFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. NCBI nr
Match: gi|295311708|ref|YP_003587368.1| (ribosomal protein S7 [Cucurbita pepo])

HSP 1 Score: 286.2 bits (731), Expect = 3.3e-74
Identity = 145/148 (97.97%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIARQKRENLHRLASTNRSFAHFRWW
Sbjct: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. NCBI nr
Match: gi|295311664|ref|YP_003587257.1| (ribosomal protein S7 [Citrullus lanatus])

HSP 1 Score: 283.9 bits (725), Expect = 1.6e-73
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHR AQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKC FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLHRLASTNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHRLASTNRSFAHFRWW 148

[Close]
BLAST of CmaCh00G005230 vs. NCBI nr
Match: gi|927682212|gb|ALE29224.1| (ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis])

HSP 1 Score: 283.5 bits (724), Expect = 2.1e-73
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIARQKRENLHRLASTNRSFAHFRWW 149
           KRGIAR+KRENLH LASTNRSFAHFRWW
Sbjct: 121 KRGIARKKRENLHGLASTNRSFAHFRWW 148

The following BLAST results are available for this feature:
BLAST of CmaCh00G005230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RT07_ARATH1.2e-7394.59Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1[more]
RT07_WHEAT6.4e-7090.54Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1[more]
RT07_BETVU7.1e-6989.19Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2[more]
RT07_MARPO4.6e-4461.90Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2[more]
RS7_PELUB5.5e-2139.8630S ribosomal protein S7 OS=Pelagibacter ubique (strain HTCC1062) GN=rpsG PE=3 S... [more]
BLAST of CmaCh00G005230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A142BZ01_ZIZJJ1.6e-7598.65Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1[more]
A0A0M4R6T5_CANSA6.0e-7597.97Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1[more]
D5I3F4_CUCPE2.3e-7497.97Ribosomal protein S7 OS=Cucurbita pepo GN=rps7 PE=4 SV=1[more]
D5I3C7_CITLA1.1e-7397.30Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1[more]
A0A0M4MPL4_9MAGN1.5e-7396.62Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1[more]
BLAST of CmaCh00G005230 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07696.17.0e-7594.59 Ribosomal protein S7p/S5e family protein[more]
ATMG01270.17.0e-7594.59ATMG01270.1 mitochondrial ribosomal protein S7[more]
ATCG01240.11.5e-1332.17ATCG01240.1 ribosomal protein S7[more]
ATCG00900.11.5e-1332.17ATCG00900.1 Ribosomal protein S7p/S5e family protein[more]
BLAST of CmaCh00G005230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1016470801|ref|YP_009241662.1|2.3e-7598.65ribosomal protein S7 (mitochondrion) [Ziziphus jujuba][more]
gi|1016880331|ref|YP_009243658.1|8.7e-7597.97ribosomal protein S7 (mitochondrion) [Cannabis sativa][more]
gi|295311708|ref|YP_003587368.1|3.3e-7497.97ribosomal protein S7 [Cucurbita pepo][more]
gi|295311664|ref|YP_003587257.1|1.6e-7397.30ribosomal protein S7 [Citrullus lanatus][more]
gi|927682212|gb|ALE29224.1|2.1e-7396.62ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR005717Ribosomal_S7_bac/org-type
IPR023798Ribosomal_S7_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh00G005230.1CmaCh00G005230.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 3..148
score: 7.4
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 10..147
score: 1.9E
IPR005717Ribosomal protein S7, bacterial/organellar-typeTIGRFAMsTIGR01029TIGR01029coord: 7..147
score: 4.6
IPR023798Ribosomal protein S7 domainGENE3DG3DSA:1.10.455.10coord: 7..147
score: 1.6
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 8..140
score: 2.3
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 9..147
score: 1.7
NoneNo IPR availablePANTHERPTHR11205:SF23RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 10..147
score: 1.9E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh00G005230Watermelon (97103) v2cmawmbB002
CmaCh00G005230Cucurbita maxima (Rimu)cmacmaB015
CmaCh00G005230Cucurbita moschata (Rifu)cmacmoB012
CmaCh00G005230Cucumber (Gy14) v2cgybcmaB275
CmaCh00G005230Melon (DHL92) v3.6.1cmamedB002
CmaCh00G005230Silver-seed gourdcarcmaB0323
CmaCh00G005230Cucumber (Chinese Long) v3cmacucB0002