CmaCh00G005110 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGACCATTCTCTGGTTGCAGGGCGGACCGGTGAGCTGCCGATCTTTTCCAATGATTTATTTATAAATTTTGAGTATTTTGTAAGAAAATGGCTCAAATATTGAAAAACAGGGTGGCTCGGGAACTGGGTTTGGGAACTTCCTAGAAATCGGGCCATTGAACTCGAACTTGGAGCCGAGAAACTCAACATGGCTGAAAAAAGCAGACCTCTTGTTTGTGGTCAACTCCTTTTCCTTTTAATTTTCATCATTTTAACCTTAAATTCTAATTTTTTTTTTTACTAAATTTATGATTTTAACATAAAAAAAACAGGATAATCCGGTCGGGACTGGATATAGCTATGTGGAGAGTGGAGGTGAATTTGCGAAAGGCGATGTGGAGACGGCGATCGACATGACGACTTTGCTGGTTGAGGTTTCGAACGACACTGTCGGCCTACGAAACGCTCCTTTGTACATCTTTGCGGAGTCTTACGGTGGCAAATTTGCCGTCACTCTGGCTTTGTCCCTTCTTCGGGCCATCCAAGCTGGCAATTTGACCCTTAATCTCGGAGGTACTTTTATTTTTACTTTTTTTTTAATAAAAAATTTCAAATATAAATGATGAATTATAACCTTTTTTTTATACGTAAAAAAAAAAATCATATTATAACTTTGATTTGTTTAAAATGATCCCATTGAATAATATAGAATCAATAATTTAAATACACGACTCTCGATTTTGTTTGCCAGGAGTTGCTCTAGGAAACAGTTGGATGTCTCTAGAAGATTACACCGTTCATATTCTCATTATCTCAATCTCATCCAAAAATTTTATCAATTTTTTTGAAATTTTCGTTTTCAGAATGATAAACGAAAAGAATACTACTAAACTATGAAGTTGATTTCAATTATATCCTGATCGAAGTGTTAAAATGAAATATCTCAGAGCTCGAGAGTATAACCGAAACCAACCTCATATTTCAGGAGTATTCTTTTATTATTTATCCTTAACACAATAATCTTTGTCTAAAATTTTACAGTCTTCTTGGGGTCCTCTTCTCAAAGATCTCTCACGAATTGACGACAAGACGCTGCAAGAATCAAATAGGTTAATATTTTTCATTTTTTTTTAATATAAACATGAATAAAGAAGTGAAATATATTCTATAAATTTAAAAGTTATATGTAACAAAAGTTGTCTTTTGAAAATCAGTTTAGCGTTGATGATCAAGCAGCAAATTAAAAACACGTTGTACGAAAATGCAACTCTTTCATGGAATGATCTTGAGGGATTAATTTTCTCCAATAGCAACCACGTGGTACGTTTTGTTATTATTATTATTACTACTATTATTTTAACAAAATCCTTCCAAACCAATGAAATTTAAGTTTAAATTTATATTAACTAAATATAGGTATACGAAGTCTTTATTTTTATTATTATTTTTTTTTTTTGTTTATTAAGTTATCTTTTAAATTAGTAAACTTATAAAACCCTCTAAAAAAAATTTCTAAAAAGAAAATCAAAATTTATGATATATTAGACGTATAATTTAAAATTTAGAACTTTTCTAAATTGGTAATTTAGGCTTCATTCATAACCATTTAATTTTTTAAGTTTATAAAAACTATTTTGACCTACAAATTCTTTTATTTTATCATCCACTTAGAAAACATGTTTTTAAAATCTAAATCCAGTTTTCAAAAAATATTTTATTTTTCTCGAGAGAACGAACATTAGTTCAAAAAGACATAAAACGAAATGATTATCGATACATTATAACGATTCGTTTTTGCAGGATTTCTATAACTTCATGTTAGATTTTGAAATGGACTCATTAGCCGCGACTACGACAAAAAATAGTGTGGAATCAAATAGGATTGATTCACTTGAAGTAAGAAAGAACTCTCCATATCTTAGTTTGAATGTCTACAAACCCGGAGCTACAGGAGACTTGGAAGCTTTGATGAATGGTCCAATTAAGCAAAAACTCACTATTATCCCACTAAATGTCACGTACGTACCAATAAACCCTATTTCTTTAAATAAAATTATAATCATTAAAACTATTCGGGTTATAATTGAAAATTCTTAAGACATAAAAATTAAATTAATTATCTAAATTTGGAGATTAAATCCTACCATTTTAGCCTAAAAAACTAAACTAAAAATTTTGAATGTACAGATGGGGAGGTTAATCGGACCTAGTCTTCCAATTTTTTACGGGAGATTTTATGAAGCCAAGAATCAAAGAGGTGTATTTTTTAACCAAACTATTTTTAATAGTTTTATTTGTGGATTAATTTTTGCTTCATACTATAACATTCAATTATTTTCTAATACTTTTATTTTTTCAAAAAGGTTGATGAGTTACTGGCTAAAGGTGTTAATGTGACGGTCTATAGCGGTCAAGTAAGTGTTTTTTTTCCTTCAAACAAAAACAAGGAATATTTTGAAGTGATAAAATTGTAATATTCTCTTAGATTTATGTTTGACTTTTTTTTTTTATAGGTGGATCTTATTTGTTCAACCAAAGGAACCCACGCCTGGATTAATAAGCTTGAGTAA ATGGCCGACCATTCTCTGGTTGCAGGGCGGACCGGGTGGCTCGGGAACTGGGTTTGGGAACTTCCTAGAAATCGGGCCATTGAACTCGAACTTGGAGCCGAGAAACTCAACATGGCTGAAAAAAGCAGACCTCTTGATAATCCGGTCGGGACTGGATATAGCTATGTGGAGAGTGGAGGTGAATTTGCGAAAGGCGATGTGGAGACGGCGATCGACATGACGACTTTGCTGGTTGAGGTTTCGAACGACACTGTCGGCCTACGAAACGCTCCTTTGTACATCTTTGCGGAGTCTTACGGTGGCAAATTTGCCGTCACTCTGGCTTTGTCCCTTCTTCGGGCCATCCAAGCTGGCAATTTGACCCTTAATCTCGGAGATTTTGAAATGGACTCATTAGCCGCGACTACGACAAAAAATAGTGTGGAATCAAATAGGATTGATTCACTTGAAGTAAGAAAGAACTCTCCATATCTTAGTTTGAATGTCTACAAACCCGGAGCTACAGGAGACTTGGAAGCTTTGATGAATGGTCCAATTAAGCAAAAACTCACTATTATCCCACTAAATGTTGATGAGTTACTGGCTAAAGGTGTTAATGTGACGGTCTATAGCGGTCAAGTGGATCTTATTTGTTCAACCAAAGGAACCCACGCCTGGATTAATAAGCTTGAGTAA ATGGCCGACCATTCTCTGGTTGCAGGGCGGACCGGGTGGCTCGGGAACTGGGTTTGGGAACTTCCTAGAAATCGGGCCATTGAACTCGAACTTGGAGCCGAGAAACTCAACATGGCTGAAAAAAGCAGACCTCTTGATAATCCGGTCGGGACTGGATATAGCTATGTGGAGAGTGGAGGTGAATTTGCGAAAGGCGATGTGGAGACGGCGATCGACATGACGACTTTGCTGGTTGAGGTTTCGAACGACACTGTCGGCCTACGAAACGCTCCTTTGTACATCTTTGCGGAGTCTTACGGTGGCAAATTTGCCGTCACTCTGGCTTTGTCCCTTCTTCGGGCCATCCAAGCTGGCAATTTGACCCTTAATCTCGGAGATTTTGAAATGGACTCATTAGCCGCGACTACGACAAAAAATAGTGTGGAATCAAATAGGATTGATTCACTTGAAGTAAGAAAGAACTCTCCATATCTTAGTTTGAATGTCTACAAACCCGGAGCTACAGGAGACTTGGAAGCTTTGATGAATGGTCCAATTAAGCAAAAACTCACTATTATCCCACTAAATGTTGATGAGTTACTGGCTAAAGGTGTTAATGTGACGGTCTATAGCGGTCAAGTGGATCTTATTTGTTCAACCAAAGGAACCCACGCCTGGATTAATAAGCTTGAGTAA MADHSLVAGRTGWLGNWVWELPRNRAIELELGAEKLNMAEKSRPLDNPVGTGYSYVESGGEFAKGDVETAIDMTTLLVEVSNDTVGLRNAPLYIFAESYGGKFAVTLALSLLRAIQAGNLTLNLGDFEMDSLAATTTKNSVESNRIDSLEVRKNSPYLSLNVYKPGATGDLEALMNGPIKQKLTIIPLNVDELLAKGVNVTVYSGQVDLICSTKGTHAWINKLE
BLAST of CmaCh00G005110 vs. Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 1.3e-13 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
BLAST of CmaCh00G005110 vs. Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.6e-11 Identity = 36/79 (45.57%), Postives = 45/79 (56.96%), Query Frame = 1
BLAST of CmaCh00G005110 vs. Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.6e-10 Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 1
BLAST of CmaCh00G005110 vs. Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=1 SV=2) HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09 Identity = 33/79 (41.77%), Postives = 46/79 (58.23%), Query Frame = 1
BLAST of CmaCh00G005110 vs. TrEMBL
Match: A0A067LH73_JATCU (Carboxypeptidase OS=Jatropha curcas GN=JCGZ_05407 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.1e-30 Identity = 86/179 (48.04%), Postives = 110/179 (61.45%), Query Frame = 1
BLAST of CmaCh00G005110 vs. TrEMBL
Match: A0A0A0KGL0_CUCSA (Carboxypeptidase OS=Cucumis sativus GN=Csa_6G149370 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 6.6e-25 Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = 1
BLAST of CmaCh00G005110 vs. TrEMBL
Match: K4D9Q9_SOLLC (Carboxypeptidase OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.2e-19 Identity = 52/81 (64.20%), Postives = 62/81 (76.54%), Query Frame = 1
BLAST of CmaCh00G005110 vs. TrEMBL
Match: A0A068UFE2_COFCA (Carboxypeptidase OS=Coffea canephora GN=GSCOC_T00024092001 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.2e-19 Identity = 55/81 (67.90%), Postives = 61/81 (75.31%), Query Frame = 1
BLAST of CmaCh00G005110 vs. TrEMBL
Match: C5Z3N7_SORBI (Carboxypeptidase OS=Sorghum bicolor GN=Sb10g020820 PE=3 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 7.1e-19 Identity = 70/198 (35.35%), Postives = 97/198 (48.99%), Query Frame = 1
BLAST of CmaCh00G005110 vs. TAIR10
Match: AT2G27920.1 (AT2G27920.1 serine carboxypeptidase-like 51) HSP 1 Score: 78.2 bits (191), Expect = 7.3e-15 Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1
BLAST of CmaCh00G005110 vs. TAIR10
Match: AT4G12910.1 (AT4G12910.1 serine carboxypeptidase-like 20) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06 Identity = 30/96 (31.25%), Postives = 48/96 (50.00%), Query Frame = 1
BLAST of CmaCh00G005110 vs. NCBI nr
Match: gi|643737952|gb|KDP43940.1| (hypothetical protein JCGZ_05407 [Jatropha curcas]) HSP 1 Score: 140.2 bits (352), Expect = 4.4e-30 Identity = 86/179 (48.04%), Postives = 110/179 (61.45%), Query Frame = 1
BLAST of CmaCh00G005110 vs. NCBI nr
Match: gi|778722139|ref|XP_011658413.1| (PREDICTED: serine carboxypeptidase-like 51 [Cucumis sativus]) HSP 1 Score: 122.5 bits (306), Expect = 9.5e-25 Identity = 60/80 (75.00%), Postives = 71/80 (88.75%), Query Frame = 1
BLAST of CmaCh00G005110 vs. NCBI nr
Match: gi|659130944|ref|XP_008465432.1| (PREDICTED: LOW QUALITY PROTEIN: serine carboxypeptidase-like 51 [Cucumis melo]) HSP 1 Score: 117.5 bits (293), Expect = 3.1e-23 Identity = 58/80 (72.50%), Postives = 69/80 (86.25%), Query Frame = 1
BLAST of CmaCh00G005110 vs. NCBI nr
Match: gi|729449603|ref|XP_010523125.1| (PREDICTED: serine carboxypeptidase-like 51 [Tarenaya hassleriana]) HSP 1 Score: 110.2 bits (274), Expect = 4.9e-21 Identity = 76/213 (35.68%), Postives = 107/213 (50.23%), Query Frame = 1
BLAST of CmaCh00G005110 vs. NCBI nr
Match: gi|944080360|gb|KQK15712.1| (hypothetical protein BRADI_1g24528 [Brachypodium distachyon]) HSP 1 Score: 104.0 bits (258), Expect = 3.5e-19 Identity = 70/209 (33.49%), Postives = 107/209 (51.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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