CmaCh00G005100 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.AAGCCCATATGTTTTGGTGGCTTTATAGAAGTCCTTCCAGAGTGGATGTCGGTTCCAAGCCATGGTCGACCATTCTCTAGTTGCAAGGCGGACCAGTGAGCTACCGATCTTTCCCAATGATTTATTTATAAATTTTGGGTATTTTGTAAGAAAATGGCTCAAATATTGAAAAATAGGGTGGCTCGGGAACTAGGTTTGGGAACTTCTTGGATATCGGGCCATTGAACTCAAACTTGATGCCAAGAAACTCAACATGGCTGAAAAAAGCAGACCTCTTGTTTGTGGTCAACTCCTTTTCCTTTTAATTTTCGGTCATTTTAACCTTAAATTCTAATATTTTTCGACTAAATTTATGATTTTAACATTAAAAAAATAGGATAATCCAGTCGGGACCGGATGTAGCTATGTGGAGAGTGGAGGTGAATTTACAAAAGGCGATATGGAGGCGGCGATCGACATGATGACTTTGCTGGCTGAGGTTTCGAACTACATTGTCGGCCTACGAAACGCTCCTTTGTACATCTTTGCGTAG AAGCCCATATGTTTTGGTGGCTTTATAGAAGTCCTTCCAGAGTGGATGTCGGTTCCAAGCCATGGTCGACCATTCTCTAGTTGCAAGGCGGACCAGTTTGGGAACTTCTTGGATATCGGGCCATTGAACTCAAACTTGATGCCAAGAAACTCAACATGGCTGAAAAAAGCAGACCTCTTGTTTGTGGATAATCCAGTCGGGACCGGATGTAGCTATGTGGAGAGTGGAGGTGAATTTACAAAAGGCGATATGGAGGCGGCGATCGACATGATGACTTTGCTGGCTGAGGTTTCGAACTACATTGTCGGCCTACGAAACGCTCCTTTGTACATCTTTGCGTAG AAGCCCATATGTTTTGGTGGCTTTATAGAAGTCCTTCCAGAGTGGATGTCGGTTCCAAGCCATGGTCGACCATTCTCTAGTTGCAAGGCGGACCAGTTTGGGAACTTCTTGGATATCGGGCCATTGAACTCAAACTTGATGCCAAGAAACTCAACATGGCTGAAAAAAGCAGACCTCTTGTTTGTGGATAATCCAGTCGGGACCGGATGTAGCTATGTGGAGAGTGGAGGTGAATTTACAAAAGGCGATATGGAGGCGGCGATCGACATGATGACTTTGCTGGCTGAGGTTTCGAACTACATTGTCGGCCTACGAAACGCTCCTTTGTACATCTTTGCGTAG KPICFGGFIEVLPEWMSVPSHGRPFSSCKADQFGNFLDIGPLNSNLMPRNSTWLKKADLLFVDNPVGTGCSYVESGGEFTKGDMEAAIDMMTLLAEVSNYIVGLRNAPLYIFA
BLAST of CmaCh00G005100 vs. Swiss-Prot
Match: SCP51_ARATH (Serine carboxypeptidase-like 51 OS=Arabidopsis thaliana GN=SCPL51 PE=2 SV=2) HSP 1 Score: 87.0 bits (214), Expect = 1.4e-16 Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CmaCh00G005100 vs. Swiss-Prot
Match: RISC_HUMAN (Retinoid-inducible serine carboxypeptidase OS=Homo sapiens GN=SCPEP1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 4.1e-16 Identity = 42/81 (51.85%), Postives = 51/81 (62.96%), Query Frame = 1
BLAST of CmaCh00G005100 vs. Swiss-Prot
Match: RISC_RAT (Retinoid-inducible serine carboxypeptidase OS=Rattus norvegicus GN=Scpep1 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.4e-15 Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 1
BLAST of CmaCh00G005100 vs. Swiss-Prot
Match: RISC_MOUSE (Retinoid-inducible serine carboxypeptidase OS=Mus musculus GN=Scpep1 PE=1 SV=2) HSP 1 Score: 82.4 bits (202), Expect = 3.4e-15 Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 1
BLAST of CmaCh00G005100 vs. TrEMBL
Match: A0A0A0KGL0_CUCSA (Carboxypeptidase OS=Cucumis sativus GN=Csa_6G149370 PE=3 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.0e-26 Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 1
BLAST of CmaCh00G005100 vs. TrEMBL
Match: A0A059DAF9_EUCGR (Carboxypeptidase OS=Eucalyptus grandis GN=EUGRSUZ_B03913 PE=3 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.9e-20 Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of CmaCh00G005100 vs. TrEMBL
Match: K4D9Q9_SOLLC (Carboxypeptidase OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 5.5e-20 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of CmaCh00G005100 vs. TrEMBL
Match: A0A067L645_JATCU (Carboxypeptidase OS=Jatropha curcas GN=JCGZ_05408 PE=3 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 5.5e-20 Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 1
BLAST of CmaCh00G005100 vs. TrEMBL
Match: M0ZHY6_SOLTU (Carboxypeptidase OS=Solanum tuberosum GN=PGSC0003DMG400000422 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 7.2e-20 Identity = 51/80 (63.75%), Postives = 60/80 (75.00%), Query Frame = 1
BLAST of CmaCh00G005100 vs. TAIR10
Match: AT2G27920.1 (AT2G27920.1 serine carboxypeptidase-like 51) HSP 1 Score: 87.0 bits (214), Expect = 7.9e-18 Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 1
BLAST of CmaCh00G005100 vs. NCBI nr
Match: gi|778722139|ref|XP_011658413.1| (PREDICTED: serine carboxypeptidase-like 51 [Cucumis sativus]) HSP 1 Score: 125.6 bits (314), Expect = 5.7e-26 Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 1
BLAST of CmaCh00G005100 vs. NCBI nr
Match: gi|659130944|ref|XP_008465432.1| (PREDICTED: LOW QUALITY PROTEIN: serine carboxypeptidase-like 51 [Cucumis melo]) HSP 1 Score: 119.8 bits (299), Expect = 3.1e-24 Identity = 56/81 (69.14%), Postives = 65/81 (80.25%), Query Frame = 1
BLAST of CmaCh00G005100 vs. NCBI nr
Match: gi|698520050|ref|XP_009804891.1| (PREDICTED: serine carboxypeptidase-like 51 [Nicotiana sylvestris]) HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20 Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 1
BLAST of CmaCh00G005100 vs. NCBI nr
Match: gi|802687887|ref|XP_012082500.1| (PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]) HSP 1 Score: 107.5 bits (267), Expect = 1.6e-20 Identity = 54/81 (66.67%), Postives = 59/81 (72.84%), Query Frame = 1
BLAST of CmaCh00G005100 vs. NCBI nr
Match: gi|629122954|gb|KCW87444.1| (hypothetical protein EUGRSUZ_B03913 [Eucalyptus grandis]) HSP 1 Score: 106.7 bits (265), Expect = 2.7e-20 Identity = 52/80 (65.00%), Postives = 61/80 (76.25%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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