CmaCh00G005040 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh00G005040
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Potassium channel
Location	Cma_Chr00 : 36323678 .. 36324574 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTATATATTTCACTGGTAGCCCCATGTCATTTTGTGTGGTGCATGCAGATAAGTTTAGGAACATGCCTTTACTTGAAGCCATTCAGAATGGACATGAGCAAGTAGCTTCTTTACTTGCCAAAGCTGGAGCAACCATTGTTGCTAATGATGCTGGTGGACTTCTTTGTTCTACTGTCGCAAGAAGGGGTTTGGGTTTTCTGAAAGGACTTCTGGCTAATGGCATTGATCCAAATGCTAGAAACTATGATCAACGGACTCCACTTCACATAGCTGTCTCAGAAGGTTTGTATCCTTTTGCAGAGGTACTTTTAAATGCTGGAGCCAGTGTTTTTGCAACGGACAGGTATGATATGATCTATTTACGTTGATTCTAAGCTATGACTGTGATTTAGCTACTACTATTCAGAGATGCCCTGACAAAGTTATTAGACAAGTATTTCTTTCATTGATGTCCACCTTCATAATCTTTGACAATGACACTTTCTCTTTGAGATCTTCTGGGAGTTAACTCACCTAAGAATACTTATTTCGATGATCACTTGGATTAAAATGGAATTATTCATCAAAGCTCACATATAATGCATTTGTTCATTTGCATTTTCATTTTTTATTTTGATTTTTCATCATCTTAGACTATGGGATAATGTGTAGATGGGGAAATACTCCGCTTGATGAAGCTCGTACCAGAGGAAATAAGAATTTGATCAGGCTACTTGAAGTTGCAAGAATTTTTCAGTTATCTGAAAACAACTCTGATATATCCGAAGAGATTCAAGGTACTAATTGATCATTTGTAAGTATAAAATGTATGCGTTAAAATCACTTAAATCTTTACTTATCCCAAGACAAATATTTTGGTGATAATGTTTTACCTTTTTTTGTTTGGTTGTTCA

mRNA sequence

ATGACTATATATTTCACTGGTAGCCCCATGTCATTTTGTGTGGTGCATGCAGATAAGTTTAGGAACATGCCTTTACTTGAAGCCATTCAGAATGGACATGAGCAAGTAGCTTCTTTACTTGCCAAAGCTGGAGCAACCATTGTTGCTAATGATGCTGGTGGACTTCTTTGTTCTACTGTCGCAAGAAGGGGTTTGGGTTTTCTGAAAGGACTTCTGGCTAATGGCATTGATCCAAATGCTAGAAACTATGATCAACGGACTCCACTTCACATAGCTGTCTCAGAAGGTTTGTATCCTTTTGCAGAGGTACTTTTAAATGCTGGAGCCAGTGTTTTTGCAACGGACAGATGGGGAAATACTCCGCTTGATGAAGCTCGTACCAGAGGAAATAAGAATTTGATCAGGCTACTTGAAGTTGCAAGAATTTTTCAGTTATCTGAAAACAACTCTGATATATCCGAAGAGATTCAAGGTACTAATTGATCATTTGTAAGTATAAAATGTATGCGTTAAAATCACTTAAATCTTTACTTATCCCAAGACAAATATTTTGGTGATAATGTTTTACCTTTTTTTGTTTGGTTGTTCA

Coding sequence (CDS)

ATGACTATATATTTCACTGGTAGCCCCATGTCATTTTGTGTGGTGCATGCAGATAAGTTTAGGAACATGCCTTTACTTGAAGCCATTCAGAATGGACATGAGCAAGTAGCTTCTTTACTTGCCAAAGCTGGAGCAACCATTGTTGCTAATGATGCTGGTGGACTTCTTTGTTCTACTGTCGCAAGAAGGGGTTTGGGTTTTCTGAAAGGACTTCTGGCTAATGGCATTGATCCAAATGCTAGAAACTATGATCAACGGACTCCACTTCACATAGCTGTCTCAGAAGGTTTGTATCCTTTTGCAGAGGTACTTTTAAATGCTGGAGCCAGTGTTTTTGCAACGGACAGATGGGGAAATACTCCGCTTGATGAAGCTCGTACCAGAGGAAATAAGAATTTGATCAGGCTACTTGAAGTTGCAAGAATTTTTCAGTTATCTGAAAACAACTCTGATATATCCGAAGAGATTCAAGGTACTAATTGA

Protein sequence

MTIYFTGSPMSFCVVHADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGIDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRLLEVARIFQLSENNSDISEEIQGTN

Homology

[Close]

BLAST of CmaCh00G005040 vs. Swiss-Prot
Match: KOR1_ORYSJ (Potassium channel KOR1 OS=Oryza sativa subsp. japonica GN=Os06g0250600 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 4.2e-35
Identity = 72/130 (55.38%), Postives = 96/130 (73.85%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DKF N PLLEA++ GH++VA+LL   GA +   +AG  LC+ VAR    F++  LA G 
Sbjct: 626 SDKFGNTPLLEAVKQGHDRVATLLFSKGAKLSLENAGSHLCTAVARGDTDFVRRALAYGG 685

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           DPNAR+YD R PLHIA +EGLY  A++L++AGASVFATDRWG TPLDE R  G++ +++L
Sbjct: 686 DPNARDYDHRAPLHIAAAEGLYLMAKLLVDAGASVFATDRWGTTPLDEGRRCGSRTMVQL 745

Query: 137 LEVARIFQLS 147
           LE A+  +LS
Sbjct: 746 LEAAKSGELS 755

[Close]

BLAST of CmaCh00G005040 vs. Swiss-Prot
Match: SKOR_ARATH (Potassium channel SKOR OS=Arabidopsis thaliana GN=SKOR PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.5e-35
Identity = 77/137 (56.20%), Postives = 97/137 (70.80%), Query Frame = 1


Query: 18  DKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGID 77
           DK  + PLLEAI+NG+++VA+LL K GAT+   +AG  LC+ VA+    FLK LL+NGID
Sbjct: 611 DKLGSTPLLEAIKNGNDRVAALLVKEGATLNIENAGTFLCTVVAKGDSDFLKRLLSNGID 670

Query: 78  PNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRLL 137
           PN+++YD RTPLH+A SEG Y  A  L+ A A+V A DRWGNTPLDEA   GNK LI+LL
Sbjct: 671 PNSKDYDHRTPLHVAASEGFYVLAIQLVEASANVLAKDRWGNTPLDEALGCGNKMLIKLL 730

Query: 138 EVARIFQLSENNSDISE 155
           E A+  Q+S   S   E
Sbjct: 731 EDAKNSQISSFPSGSKE 747

[Close]

BLAST of CmaCh00G005040 vs. Swiss-Prot
Match: GORK_ARATH (Potassium channel GORK OS=Arabidopsis thaliana GN=GORK PE=1 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-33
Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 1


Query: 18  DKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGID 77
           DKF + PL EA++ G E V  LL K GA+    D+G  LC+TVA+    FLK LL++G++
Sbjct: 594 DKFGHTPLFEAVKAGQEGVIGLLVKEGASFNLEDSGNFLCTTVAKGDSDFLKRLLSSGMN 653

Query: 78  PNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRLL 137
           PN+ +YD RTPLH+A SEGL+  A++L+ AGASV + DRWGN+PLDEAR  GNK LI+LL
Sbjct: 654 PNSEDYDHRTPLHVAASEGLFLMAKMLVEAGASVISKDRWGNSPLDEARLCGNKKLIKLL 713

Query: 138 EVARIFQLSENNSDISE 155
           E  +  Q S   S + E
Sbjct: 714 EDVKNAQSSIYPSSLRE 730

[Close]

BLAST of CmaCh00G005040 vs. Swiss-Prot
Match: KOR2_ORYSJ (Potassium channel KOR2 OS=Oryza sativa subsp. japonica GN=Os04g0445000 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-32
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 1


Query: 18  DKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGID 77
           D+F N PLL+A+++GH+++ SLL + GA +   DAGG LC  V    +  LK LL  GI 
Sbjct: 591 DRFGNSPLLQAVKSGHDRITSLLVEHGAILNLEDAGGYLCRVVRGGRIDLLKKLLRFGIS 650

Query: 78  PNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRLL 137
           PN RNYDQRTPLHIA +EGL+  A  L+ +GA + A DRWGNTPLDE R   +K L+R+L
Sbjct: 651 PNCRNYDQRTPLHIAAAEGLHLVASTLIESGADIQAKDRWGNTPLDEGRRCSSKPLVRIL 710

Query: 138 EVAR 142
           E AR
Sbjct: 711 EQAR 714

[Close]

BLAST of CmaCh00G005040 vs. Swiss-Prot
Match: ANKR1_CHICK (Ankyrin repeat domain-containing protein 1 OS=Gallus gallus GN=ANKRD1 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 43/122 (35.25%), Postives = 63/122 (51.64%), Query Frame = 1


Query: 18  DKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRG--LGFLKGLLANG 77
           ++++   L  A   GH +V   L +AGA +   D         A RG  L  +K LL  G
Sbjct: 150 NEYKRTALHRACSEGHLEVVKKLVEAGALLELKDMLESTALHWACRGGNLEIVKFLLDKG 209

Query: 78  IDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIR 137
           I+ NAR+  + TPLH+AV  G +  AE L+   A + A DR G+TP+ +A       ++R
Sbjct: 210 INRNARDKLRSTPLHVAVRTGQHDCAEHLIACEADLNAKDREGDTPMHDAVRLNRYKMVR 269

[Close]

BLAST of CmaCh00G005040 vs. TrEMBL
Match: A0A067KMR1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07944 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.1e-45
Identity = 91/131 (69.47%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DKF N PLLEA++NGH++VASLL +AGAT+  +DAGG LC TVA+R LG LK  L NG+
Sbjct: 465 SDKFGNTPLLEALRNGHDEVASLLVRAGATLAIDDAGGFLCMTVAKRDLGLLKRALVNGV 524

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+N+D RTPLHIA SEGLYP A +LL AGASV A DRWGNTPLDEAR  G+KNLI+L
Sbjct: 525 NPNAKNFDFRTPLHIAASEGLYPMASLLLEAGASVLAKDRWGNTPLDEARVGGDKNLIKL 584

Query: 137 LEVARIFQLSE 148
           LE ARI Q+SE
Sbjct: 585 LEAARISQMSE 595

[Close]

BLAST of CmaCh00G005040 vs. TrEMBL
Match: H2DPY4_9ROSA (Potassium channel OS=Malus hupehensis GN=SKOR PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.7e-44
Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DK+ N PLLEAI+NGH++VASLL KAGA++  +DAG  LC+T ARR +  LK LLAN I
Sbjct: 624 SDKYGNTPLLEAIKNGHDEVASLLVKAGASLAVDDAGDFLCTTAARRNMELLKRLLANDI 683

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+NYDQR+PLH+A SEGLYP AE LL AGASV + DRWG TPLDEAR  GNK LI+L
Sbjct: 684 NPNAKNYDQRSPLHVAASEGLYPMAEFLLEAGASVLSKDRWGRTPLDEARIGGNKKLIKL 743

Query: 137 LEVARIFQLSENNSDISEE 156
           LEVAR  QLSE  SD S+E
Sbjct: 744 LEVARASQLSE-FSDHSQE 761

[Close]

BLAST of CmaCh00G005040 vs. TrEMBL
Match: B9T5D2_RICCO (Potassium channel SKOR, putative OS=Ricinus communis GN=RCOM_0287640 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.5e-44
Identity = 89/131 (67.94%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DKF N PLLEA++NGH++VASLL +AGAT+  +D+GG LC  VARR +G LK  LANGI
Sbjct: 597 SDKFGNTPLLEAVKNGHDEVASLLVRAGATMAIDDSGGFLCMAVARRDMGLLKRALANGI 656

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +P+A+N+D RTPLHIA SEG YP A +LL AGASVF+ DRWGNTPLD+AR  GNKNLI+L
Sbjct: 657 NPSAKNFDCRTPLHIAASEGSYPIACLLLEAGASVFSKDRWGNTPLDDARVGGNKNLIKL 716

Query: 137 LEVARIFQLSE 148
           LEVAR  Q+SE
Sbjct: 717 LEVARTTQMSE 727

[Close]

BLAST of CmaCh00G005040 vs. TrEMBL
Match: A0A0G2UKM2_9ROSA (Potassium channel SKOR OS=Pyrus betulifolia GN=SKOR PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.0e-44
Identity = 93/139 (66.91%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DK+ N PLLEAI+NGH++VASLL KAGA++  +DAG  LC+T ARR +  LK LLAN I
Sbjct: 623 SDKYGNTPLLEAIKNGHDEVASLLVKAGASLAVDDAGDFLCTTAARRNMELLKRLLANDI 682

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+NYDQR+PLH+A SEGLYP AE LL AGASV + DRWG TPLDEAR  GNK LI+L
Sbjct: 683 NPNAKNYDQRSPLHVAASEGLYPMAEFLLEAGASVLSKDRWGRTPLDEARIGGNKRLIKL 742

Query: 137 LEVARIFQLSENNSDISEE 156
           LEVAR  QLS+  SD S+E
Sbjct: 743 LEVARASQLSD-FSDHSQE 760

[Close]

BLAST of CmaCh00G005040 vs. TrEMBL
Match: A0A0U4EN80_9FABA (Outward rectifying K+ channel OS=Ammopiptanthus mongolicus PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.7e-43
Identity = 89/139 (64.03%), Postives = 112/139 (80.58%), Query Frame = 1


Query: 16  HADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANG 75
           +ADKF   PLLEAI+NGHE+VA+LL  AGAT+  +DAG  LC TVA++ L  LK +LA G
Sbjct: 593 YADKFGATPLLEAIKNGHEEVATLLVNAGATLTIDDAGNFLCMTVAKKELDLLKKVLACG 652

Query: 76  IDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIR 135
           I+PNA+NYDQRTPLHIA SEGLY  AE+LL A ASV + DRWG+TPLDEART GN+N+I+
Sbjct: 653 INPNAKNYDQRTPLHIAASEGLYTMAELLLEAAASVLSKDRWGSTPLDEARTGGNRNMIK 712

Query: 136 LLEVARIFQLSENNSDISE 155
           +LEVA++ QL+E ++ I E
Sbjct: 713 MLEVAKVSQLAELSNSIQE 731

[Close]

BLAST of CmaCh00G005040 vs. TAIR10
Match: AT3G02850.1 (AT3G02850.1 STELAR K+ outward rectifier)

HSP 1 Score: 148.7 bits (374), Expect = 3.1e-36
Identity = 77/137 (56.20%), Postives = 97/137 (70.80%), Query Frame = 1


Query: 18  DKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGID 77
           DK  + PLLEAI+NG+++VA+LL K GAT+   +AG  LC+ VA+    FLK LL+NGID
Sbjct: 611 DKLGSTPLLEAIKNGNDRVAALLVKEGATLNIENAGTFLCTVVAKGDSDFLKRLLSNGID 670

Query: 78  PNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRLL 137
           PN+++YD RTPLH+A SEG Y  A  L+ A A+V A DRWGNTPLDEA   GNK LI+LL
Sbjct: 671 PNSKDYDHRTPLHVAASEGFYVLAIQLVEASANVLAKDRWGNTPLDEALGCGNKMLIKLL 730

Query: 138 EVARIFQLSENNSDISE 155
           E A+  Q+S   S   E
Sbjct: 731 EDAKNSQISSFPSGSKE 747

[Close]

BLAST of CmaCh00G005040 vs. TAIR10
Match: AT5G37500.1 (AT5G37500.1 gated outwardly-rectifying K+ channel)

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 1


Query: 18  DKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGID 77
           DKF + PL EA++ G E V  LL K GA+    D+G  LC+TVA+    FLK LL++G++
Sbjct: 594 DKFGHTPLFEAVKAGQEGVIGLLVKEGASFNLEDSGNFLCTTVAKGDSDFLKRLLSSGMN 653

Query: 78  PNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRLL 137
           PN+ +YD RTPLH+A SEGL+  A++L+ AGASV + DRWGN+PLDEAR  GNK LI+LL
Sbjct: 654 PNSEDYDHRTPLHVAASEGLFLMAKMLVEAGASVISKDRWGNSPLDEARLCGNKKLIKLL 713

Query: 138 EVARIFQLSENNSDISE 155
           E  +  Q S   S + E
Sbjct: 714 EDVKNAQSSIYPSSLRE 730

[Close]

BLAST of CmaCh00G005040 vs. TAIR10
Match: AT4G18950.1 (AT4G18950.1 Integrin-linked protein kinase family)

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-11
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 1


Query: 53  GGLLCSTVARRG-LGFLKGLLANGIDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASV 112
           GG+    +A  G +  +K L+ +GID N R+ D RT LH+A  +GL    E+LL+  A V
Sbjct: 43  GGVRLMYLANEGDIEGIKELIDSGIDANYRDIDDRTALHVAACQGLKDVVELLLDRKAEV 102

Query: 113 FATDRWGNTPLDEARTRGNKNLIRLLEV 140
              DRWG+TP  +A    N ++I++LE+
Sbjct: 103 DPKDRWGSTPFADAIFYKNIDVIKILEI 130

[Close]

BLAST of CmaCh00G005040 vs. TAIR10
Match: AT4G32500.1 (AT4G32500.1 K+ transporter 5)

HSP 1 Score: 62.0 bits (149), Expect = 3.8e-10
Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 18  DKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGID 77
           D   ++PL EAI   HE+ A LL++ GAT+  +  G   C  V +  L  LK ++  G D
Sbjct: 605 DSEGSVPLWEAIIGRHEENAKLLSENGATLSFDTVGYFSCLAVGQNNLNALKDIVKYGGD 664

Query: 78  PNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNL 134
            +  + +  T LH AVSEG     + LL  GA +   D +G T    A  +G++++
Sbjct: 665 ISLSDVNGTTALHRAVSEGNLEIVQFLLEKGADMDKPDVYGWTARALAEHQGHEDI 720

[Close]

BLAST of CmaCh00G005040 vs. TAIR10
Match: AT3G59830.1 (AT3G59830.1 Integrin-linked protein kinase family)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 1


Query: 71  LLANGIDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGN 130
           LL  GID N+ + D RT LHIA  EG Y   +VLL+  A++ A DRWG+T   +A+  GN
Sbjct: 95  LLNEGIDVNSIDLDGRTALHIASCEGHYDVVKVLLSRRANIDARDRWGSTAAVDAKYYGN 154

Query: 131 KNLIRLLE 139
             +  LL+
Sbjct: 155 VEVYNLLK 162

[Close]

BLAST of CmaCh00G005040 vs. NCBI nr
Match: gi|643729629|gb|KDP37417.1| (hypothetical protein JCGZ_07944 [Jatropha curcas])

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 91/131 (69.47%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DKF N PLLEA++NGH++VASLL +AGAT+  +DAGG LC TVA+R LG LK  L NG+
Sbjct: 465 SDKFGNTPLLEALRNGHDEVASLLVRAGATLAIDDAGGFLCMTVAKRDLGLLKRALVNGV 524

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+N+D RTPLHIA SEGLYP A +LL AGASV A DRWGNTPLDEAR  G+KNLI+L
Sbjct: 525 NPNAKNFDFRTPLHIAASEGLYPMASLLLEAGASVLAKDRWGNTPLDEARVGGDKNLIKL 584

Query: 137 LEVARIFQLSE 148
           LE ARI Q+SE
Sbjct: 585 LEAARISQMSE 595

[Close]

BLAST of CmaCh00G005040 vs. NCBI nr
Match: gi|802600361|ref|XP_012072905.1| (PREDICTED: potassium channel SKOR-like [Jatropha curcas])

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 91/131 (69.47%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DKF N PLLEA++NGH++VASLL +AGAT+  +DAGG LC TVA+R LG LK  L NG+
Sbjct: 602 SDKFGNTPLLEALRNGHDEVASLLVRAGATLAIDDAGGFLCMTVAKRDLGLLKRALVNGV 661

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+N+D RTPLHIA SEGLYP A +LL AGASV A DRWGNTPLDEAR  G+KNLI+L
Sbjct: 662 NPNAKNFDFRTPLHIAASEGLYPMASLLLEAGASVLAKDRWGNTPLDEARVGGDKNLIKL 721

Query: 137 LEVARIFQLSE 148
           LE ARI Q+SE
Sbjct: 722 LEAARISQMSE 732

[Close]

BLAST of CmaCh00G005040 vs. NCBI nr
Match: gi|1009132994|ref|XP_015883670.1| (PREDICTED: potassium channel SKOR-like [Ziziphus jujuba])

HSP 1 Score: 189.5 bits (480), Expect = 4.5e-45
Identity = 93/131 (70.99%), Postives = 108/131 (82.44%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DKF N P ++AI+NGH+QVASLLAKAGAT+  +D GG LCSTV +R L  LK +LAN I
Sbjct: 561 SDKFGNTPFIDAIKNGHDQVASLLAKAGATLTFDDTGGFLCSTVMKRDLDLLKRVLANDI 620

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+NYD RTPLHIA SEGLY  AE+LL+AGASV A DRWGNTPLDEAR  GNKNLI+L
Sbjct: 621 NPNAKNYDLRTPLHIAASEGLYTMAELLLSAGASVLAKDRWGNTPLDEARIGGNKNLIKL 680

Query: 137 LEVARIFQLSE 148
           LEVA+  QLSE
Sbjct: 681 LEVAKTSQLSE 691

[Close]

BLAST of CmaCh00G005040 vs. NCBI nr
Match: gi|645270067|ref|XP_008240285.1| (PREDICTED: potassium channel SKOR-like [Prunus mume])

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-44
Identity = 94/139 (67.63%), Postives = 109/139 (78.42%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DKF N PLLEAI++GH+QVASLL KAGA++  +DAG  LC TVARR L  LK LLAN I
Sbjct: 621 SDKFGNTPLLEAIKHGHDQVASLLVKAGASLTIDDAGDFLCITVARRNLDLLKRLLANDI 680

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+NYDQRT LH+A SEGLYP AE LL AGASV + DRWG+TPLDEAR  GNK LI+L
Sbjct: 681 NPNAKNYDQRTALHVAASEGLYPMAEFLLEAGASVLSKDRWGSTPLDEARIGGNKKLIKL 740

Query: 137 LEVARIFQLSENNSDISEE 156
           LEVAR  QLSE +    +E
Sbjct: 741 LEVARASQLSEFSDQYHQE 759

[Close]

BLAST of CmaCh00G005040 vs. NCBI nr
Match: gi|373501955|gb|AEY75250.1| (potassium channel [Malus hupehensis])

HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44
Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 1


Query: 17  ADKFRNMPLLEAIQNGHEQVASLLAKAGATIVANDAGGLLCSTVARRGLGFLKGLLANGI 76
           +DK+ N PLLEAI+NGH++VASLL KAGA++  +DAG  LC+T ARR +  LK LLAN I
Sbjct: 624 SDKYGNTPLLEAIKNGHDEVASLLVKAGASLAVDDAGDFLCTTAARRNMELLKRLLANDI 683

Query: 77  DPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDRWGNTPLDEARTRGNKNLIRL 136
           +PNA+NYDQR+PLH+A SEGLYP AE LL AGASV + DRWG TPLDEAR  GNK LI+L
Sbjct: 684 NPNAKNYDQRSPLHVAASEGLYPMAEFLLEAGASVLSKDRWGRTPLDEARIGGNKKLIKL 743

Query: 137 LEVARIFQLSENNSDISEE 156
           LEVAR  QLSE  SD S+E
Sbjct: 744 LEVARASQLSE-FSDHSQE 761

The following BLAST results are available for this feature:

BLAST of CmaCh00G005040 vs. Swiss-Prot


Match Name	E-value	Identity	Description
KOR1_ORYSJ	4.2e-35	55.38	Potassium channel KOR1 OS=Oryza sativa subsp. japonica GN=Os06g0250600 PE=2 SV=1	[more]
SKOR_ARATH	5.5e-35	56.20	Potassium channel SKOR OS=Arabidopsis thaliana GN=SKOR PE=1 SV=1	[more]
GORK_ARATH	2.3e-33	52.55	Potassium channel GORK OS=Arabidopsis thaliana GN=GORK PE=1 SV=2	[more]
KOR2_ORYSJ	2.6e-32	54.03	Potassium channel KOR2 OS=Oryza sativa subsp. japonica GN=Os04g0445000 PE=2 SV=2	[more]
ANKR1_CHICK	1.1e-09	35.25	Ankyrin repeat domain-containing protein 1 OS=Gallus gallus GN=ANKRD1 PE=2 SV=1	[more]

BLAST of CmaCh00G005040 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KMR1_JATCU	1.1e-45	69.47	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07944 PE=4 SV=1	[more]
H2DPY4_9ROSA	2.7e-44	67.63	Potassium channel OS=Malus hupehensis GN=SKOR PE=2 SV=1	[more]
B9T5D2_RICCO	3.5e-44	67.94	Potassium channel SKOR, putative OS=Ricinus communis GN=RCOM_0287640 PE=4 SV=1	[more]
A0A0G2UKM2_9ROSA	6.0e-44	66.91	Potassium channel SKOR OS=Pyrus betulifolia GN=SKOR PE=2 SV=1	[more]
A0A0U4EN80_9FABA	1.7e-43	64.03	Outward rectifying K+ channel OS=Ammopiptanthus mongolicus PE=2 SV=1	[more]

BLAST of CmaCh00G005040 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02850.1	3.1e-36	56.20	STELAR K+ outward rectifier	[more]
AT5G37500.1	1.3e-34	52.55	gated outwardly-rectifying K+ channel	[more]
AT4G18950.1	2.7e-11	39.77	Integrin-linked protein kinase family	[more]
AT4G32500.1	3.8e-10	33.62	K+ transporter 5	[more]
AT3G59830.1	1.1e-09	45.59	Integrin-linked protein kinase family	[more]

BLAST of CmaCh00G005040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|643729629\|gb\|KDP37417.1\|	1.6e-45	69.47	hypothetical protein JCGZ_07944 [Jatropha curcas]	[more]
gi\|802600361\|ref\|XP_012072905.1\|	1.6e-45	69.47	PREDICTED: potassium channel SKOR-like [Jatropha curcas]	[more]
gi\|1009132994\|ref\|XP_015883670.1\|	4.5e-45	70.99	PREDICTED: potassium channel SKOR-like [Ziziphus jujuba]	[more]
gi\|645270067\|ref\|XP_008240285.1\|	2.9e-44	67.63	PREDICTED: potassium channel SKOR-like [Prunus mume]	[more]
gi\|373501955\|gb\|AEY75250.1\|	3.8e-44	67.63	potassium channel [Malus hupehensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009395	phospholipid catabolic process
biological_process	GO:0071805	potassium ion transmembrane transport
cellular_component	GO:0008076	voltage-gated potassium channel complex
molecular_function	GO:0004622	lysophospholipase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0005249	voltage-gated potassium channel activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G005040.1	CmaCh00G005040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 84..113 score: 0.0031coord: 20..49 score:
IPR002110	Ankyrin repeat	PROFILE	PS50088	ANK_REPEAT	coord: 84..116 score: 12
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 16..138 score: 8.9
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 20..137 score:
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 17..137 score: 1.71
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 17..154 score: 1.1
None	No IPR available	PANTHER	PTHR10217:SF514	SUBFAMILY NOT NAMED	coord: 17..154 score: 1.1
None	No IPR available	PFAM	PF13857	Ank_5	coord: 71..125 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh00G005040	CmaCh06G009140	Cucurbita maxima (Rimu)	cmacmaB027

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh00G005040	Cucumber (Gy14) v2	cgybcmaB275
CmaCh00G005040	Cucumber (Gy14) v2	cgybcmaB280
CmaCh00G005040	Melon (DHL92) v3.6.1	cmamedB002
CmaCh00G005040	Silver-seed gourd	carcmaB0323
CmaCh00G005040	Cucumber (Chinese Long) v3	cmacucB0002
CmaCh00G005040	Watermelon (97103) v2	cmawmbB002
CmaCh00G005040	Watermelon (97103) v2	cmawmbB007
CmaCh00G005040	Cucurbita maxima (Rimu)	cmacmaB003
CmaCh00G005040	Cucurbita maxima (Rimu)	cmacmaB015
CmaCh00G005040	Cucumber (Gy14) v1	cgycmaB0707
CmaCh00G005040	Cucurbita moschata (Rifu)	cmacmoB012
CmaCh00G005040	Cucurbita moschata (Rifu)	cmacmoB017
CmaCh00G005040	Wild cucumber (PI 183967)	cmacpiB004
CmaCh00G005040	Cucumber (Chinese Long) v2	cmacuB004
CmaCh00G005040	Cucurbita pepo (Zucchini)	cmacpeB023