CmaCh00G004950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh00G004950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MATH domain-containing protein
Location	Cma_Chr00 : 36108791 .. 36110169 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGGCCTTCTAGTGCACCTCTAATTCTCGGTCCAAGAGCTGCAGCACCCGTTGTTAATGTGGTTCATACATCCCCATTGCTTGCTCGTTCCGTGAGTGCAGCTGGTCGGTTAGGTCCAGACCTTGCTCCAGCAACACATAGTTATGCTCGCTCGTTCCGTGAGTGCAGCTGGTCGGTTAGGTCCAGACCTTGCTCCAGCAACACATAGTTATGCTCCCCAGTCTTATAGGAATGCCATAATTGGAAACCATGCAGCTCCCAGCGGTGCTGGATATGTTCATCTGAGCACTTCATCCTCAGGCGTGAGCCCATCTTCAGCCTTCTCTTTGACATCTGCTATGGTTTCTTCACCCATGTTTGTACCACACAACTCTGACAGGTCGGATCTGAGTGCTGTTAGATCGAATTTTCCTTTTGGTATGGTAACTCGAGATGTCTTACCGAACAGTCCCCAGTGGGTAGAGGGTTCACAGAGGGAAGCTGTTAGGAGCATGCATTACAATTCTTCTCTACTGTCCCCAGTGGGTAGAGGGTTCACAGAGGGAAGCTGTTAGGAGCATGCATTACAATTCTTCTCTACTTGATGATGTTCAAGATTTATACAAGAAACAAATTCGTGGTTCGACACATGAACTTCTGTCAGCAGAGCTCTCAGCTTGTACATCTGGTCGACAGCTCCAAGGTTTCGCTGAGGAGTTCCCTCACCTTGGCAGAGCTCTCAGCTTGTACATCTGGTCGACAGCTCCAAGGTTTCGCTGAGGAGTTCCCTCACCTTGATATAATCAACGATCTTCTTGATGACGAAAACATTGTTGGGATTTCATCTAGAGACGGCTCAATGTTCAACTCTCTTGGCAATGGCCCAAGTCTGTTGAACAGACAGTTCTCTCTTCCTGGTGACATGGTGGGGAAGGCTGGCGATGTAGGGTCCTCCACGAGCTCTTGCAGGTTCGAGCGGACACAGAGTTATCAAAATGGCAGGTTCCAATGGGGGTATGGCTCTTCCATCAGTCGTTATCGAGCGGACACAGAGTTATCAAAATGGCAGGTTCCAATGGGGGTATGGCTCTTCCATCAGTCGTTACGAACCAGGCATGGATTTTATTCCACCTTCGAGTCAACAACAGCAGCACTTAAATGGCCAGATTGATGGGTTGATTCCAAATTGGCGCGCAGCTTCTGATCTCTCTGTACTTGGGACAAGGTCTTTAGATTGATGGGTTGATTCCAAATTGGCGCGCAGCTTCTGATCTCTCTGTACTTGGGACAAGGTCTTTAGACTTTGATGGTTACCAATATCTTAACCCAGAATACTCAAATATGGCCCATGGCATCAATGGCTACAGTGCGTTTCGACCGTCAGATGGGCACTGA

mRNA sequence

ATGTCAAGGCCTTCTAGTGCACCTCTAATTCTCGGTCCAAGAGCTGCAGCACCCGTTGTTAATGTGGTTCATACATCCCCATTGCTTGCTCGTTCCGTGAGTGCAGCTGCTGGTCGGTTAGGTCCAGACCTTGCTCCAGCAACACATAGTTATGCTCCCCAGTCTTATAGGAATGCCATAATTGGAAACCATGCAGCTCCCAGCGGTGCTGGATATGTTCATCTGAGCACTTCATCCTCAGGCGTGAGCCCATCTTCAGCCTTCTCTTTGACATCTGCTATGGTTTCTTCACCCATGTTTGTACCACACAACTCTGACAGGTCGGATCTGAGTGCTGTTAGATCGAATTTTCCTTTTGGTATGGTAACTCGAGATGTCTTACCGAACAGTCCCCAGTGGGTAGAGGGTTCACAGAGGGAAGCTGTTAGGAGCATGCATTACAATTCTTCTCTACTGTCCCCAAGGGTTCACAGAGGGAAGCTGTTAGGAGCATGCATTACAATTCTTCTCTACTTGATGATGTTCAAGATTTATACAAGAAACAAATTCGTGGTTCGACACATGAACTTCTGTCAGCAGAGCTCTCAGCTTGTACATCTGGTCGACAGCTCCAAGGTTTCGCTGAGGAGTTCCCTCACCTTGGCAGAGCTCTCAGCTTGTACATCTGGTCGACAGCTCCAAGGTTTCGCTGAGGAGTTCCCTCACCTTGATATAATCAACGATCTTCTTGATGACGAAAACATTGTTGGGATTTCATCTAGAGACGGCTCAATGTTCAACTCTCTTGGCAATGGCCCAAGTCTGTTGAACAGACAGTTCTCTCTTCCTGGTGACATGGTGGGGAAGGCTGGCGATGGTCCTCCACGAGCTCTTGCAGGTTCGAGCGGACACAGAGTTATCAAAATGGCAGGTTCCAATGGGGGTATGGCTCTTCCATCAGTCGTTATCGAGCGGACACAGAGTTATCAAAATGGCAGGTTCCAATGGGGGTATGGCTCTTCCATCAGTCGTTACGAACCAGGCATGGATTTTATTCCACCTTCGAGTCAACAACAGCAGCACTTAAATGGCCAGATTGATGGGTTGATTCCAAATTGGCGCGCAGCTTCTGATCTCTCTATTGATGGGTTGATTCCAAATTGGCGCGCAGCTTCTGATCTCTCTGTACTTGGGACAAGGTCTTTAGACTTTGATGGTTACCAATATCTTAACCCAGAATACTCAAATATGGCCCATGGCATCAATGGCTACAGTGCGTTTCGACCGTCAGATGGGCACTGA

Coding sequence (CDS)

ATGTCAAGGCCTTCTAGTGCACCTCTAATTCTCGGTCCAAGAGCTGCAGCACCCGTTGTTAATGTGGTTCATACATCCCCATTGCTTGCTCGTTCCGTGAGTGCAGCTGCTGGTCGGTTAGGTCCAGACCTTGCTCCAGCAACACATAGTTATGCTCCCCAGTCTTATAGGAATGCCATAATTGGAAACCATGCAGCTCCCAGCGGTGCTGGATATGTTCATCTGAGCACTTCATCCTCAGGCGTGAGCCCATCTTCAGCCTTCTCTTTGACATCTGCTATGGTTTCTTCACCCATGTTTGTACCACACAACTCTGACAGGTCGGATCTGAGTGCTGTTAGATCGAATTTTCCTTTTGGTATGGTAACTCGAGATGTCTTACCGAACAGTCCCCAGTGGGTAGAGGGTTCACAGAGGGAAGCTGTTAGGAGCATGCATTACAATTCTTCTCTACTGTCCCCAAGGGTTCACAGAGGGAAGCTGTTAGGAGCATGCATTACAATTCTTCTCTACTTGATGATGTTCAAGATTTATACAAGAAACAAATTCGTGGTTCGACACATGAACTTCTGTCAGCAGAGCTCTCAGCTTGTACATCTGGTCGACAGCTCCAAGGTTTCGCTGAGGAGTTCCCTCACCTTGGCAGAGCTCTCAGCTTGTACATCTGGTCGACAGCTCCAAGGTTTCGCTGAGGAGTTCCCTCACCTTGATATAATCAACGATCTTCTTGATGACGAAAACATTGTTGGGATTTCATCTAGAGACGGCTCAATGTTCAACTCTCTTGGCAATGGCCCAAGTCTGTTGAACAGACAGTTCTCTCTTCCTGGTGACATGGTGGGGAAGGCTGGCGATGGTCCTCCACGAGCTCTTGCAGGTTCGAGCGGACACAGAGTTATCAAAATGGCAGGTTCCAATGGGGGTATGGCTCTTCCATCAGTCGTTATCGAGCGGACACAGAGTTATCAAAATGGCAGGTTCCAATGGGGGTATGGCTCTTCCATCAGTCGTTACGAACCAGGCATGGATTTTATTCCACCTTCGAGTCAACAACAGCAGCACTTAAATGGCCAGATTGATGGGTTGATTCCAAATTGGCGCGCAGCTTCTGATCTCTCTATTGATGGGTTGATTCCAAATTGGCGCGCAGCTTCTGATCTCTCTGTACTTGGGACAAGGTCTTTAGACTTTGATGGTTACCAATATCTTAACCCAGAATACTCAAATATGGCCCATGGCATCAATGGCTACAGTGCGTTTCGACCGTCAGATGGGCACTGA

Protein sequence

MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAIIGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFGMVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITILLYLMMFKIYTRNKFVVRHMNFCQQSSQLVHLVDSSKVSLRSSLTLAELSACTSGRQLQGFAEEFPHLDIINDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSGHRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQHLNGQIDGLIPNWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGINGYSAFRPSDGH

Homology

[Close]

BLAST of CmaCh00G004950 vs. Swiss-Prot
Match: Y5436_ARATH (MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-06
Identity = 55/140 (39.29%), Postives = 73/140 (52.14%), Query Frame = 1


Query: 1   MSRPSSAPLILGPRAAAPVVNVVHTSPL-LARSVSAAAGRLGPDLAPATHS--YAPQSYR 60
           MSRP SAP I+ P  AAPV++ V TS   LARS+S + GRLG      THS  Y PQSY+
Sbjct: 763 MSRPLSAP-IIPPTQAAPVISAVQTSTASLARSMS-STGRLG----SPTHSQAYNPQSYK 822

Query: 61  NAIIGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNF 120
           +AI+G+      +G+ H S+ SSG S    +S       SP+ V +          +S F
Sbjct: 823 HAIVGS------SGFTHPSSQSSGTSTLPPYS-----HPSPISVSN----------QSGF 875

Query: 121 PFGMVTRDVLPNSPQWVEGS 138
           P  + + DV      W  GS
Sbjct: 883 PINVGSWDVSSGGLLWTGGS 875

[Close]

BLAST of CmaCh00G004950 vs. TrEMBL
Match: A0A0A0L4I5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142930 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.2e-83
Identity = 220/433 (50.81%), Postives = 252/433 (58.20%), Query Frame = 1


Query: 1   MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
           MSRPSSAPLI GPRA APVVNVVHTSPLLARSVSAA GRLGPD APATHSY         
Sbjct: 612 MSRPSSAPLIPGPRATAPVVNVVHTSPLLARSVSAA-GRLGPDPAPATHSY--------- 671

Query: 61  IGNHAAPSGAGYVHLSTSSSGVSPSSAFSL---TSAMVSSPMFVPHNSDRSDLSAVRSNF 120
                AP        +   + V+PS+A  +   TS   +SP                 + 
Sbjct: 672 -----APQS---YRNAIMGNHVAPSTAGYVHLSTSTSGASP-----------------ST 731

Query: 121 PFGMVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITI-LLYLMMFK 180
            F + +  V  +SP +V            +NS  L P   R     + +T  +L      
Sbjct: 732 AFSLASAMV--SSPMYVP-----------HNSERLDPNAVRSSYPFSMVTRDVLPNSPQW 791

Query: 181 IYTRNKFVVRHMNFCQQSSQLVHLVDSSKVSLRSS---LTLAELSACTSGRQLQGFAEEF 240
           +    +  VR M++   S  L  + D  K  +R S   +  AE  ACTSGRQLQGFAEEF
Sbjct: 792 VEGSQREAVRSMHY--NSPLLNDVQDLYKKPIRGSTPDVLSAEFPACTSGRQLQGFAEEF 851

Query: 241 PHLDIINDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAG 300
           PHLDIINDLLDDENIVGIS+RD SMF SLGNGP+LLNRQFSLPGDM G AGD        
Sbjct: 852 PHLDIINDLLDDENIVGISARDNSMFQSLGNGPTLLNRQFSLPGDMGGMAGD-------- 911

Query: 301 SSGHRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQ 360
                         G +  S   ERT+SY +G F  GY SSIS YEP MDFIPPSS QQQ
Sbjct: 912 -------------VGSSTSSCRFERTRSYHDGGFHRGYTSSISHYEPTMDFIPPSS-QQQ 957

Query: 361 HLNGQIDGLIPNWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHG 420
           HLNGQIDGL+PNWRA SDLS+               LGTR+LDFDGYQYLN EYSNMAHG
Sbjct: 972 HLNGQIDGLVPNWRATSDLSL---------------LGTRTLDFDGYQYLNAEYSNMAHG 957

Query: 421 INGYSAFRPSDGH 427
           +NGY+ FRPSDGH
Sbjct: 1032 MNGYNVFRPSDGH 957

[Close]

BLAST of CmaCh00G004950 vs. TrEMBL
Match: A0A0D2T3W5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247200 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69
Identity = 182/429 (42.42%), Postives = 242/429 (56.41%), Query Frame = 1


Query: 1    MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
            MSRPSSAPL+ GPR    +V+ V T+P LARSVSAA GRLGPD +PAT SY PQSYRNAI
Sbjct: 773  MSRPSSAPLVPGPRPTT-LVSTVQTTPFLARSVSAA-GRLGPDPSPAT-SYVPQSYRNAI 832

Query: 61   IGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFG 120
            +GNH + S AG+   ++ SSGV+   A+S   A+VS+P+++PH+ DR + ++V+S FPFG
Sbjct: 833  MGNHVSSSSAGFTDPNSRSSGVNSLPAYSQPPALVSAPVYIPHSPDRIEPNSVQSGFPFG 892

Query: 121  MVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITILLYLMMFKIYTR 180
            MVTRD LP++PQW+E S+R+  RS H + SLLS                  +    +Y  
Sbjct: 893  MVTRDTLPSAPQWLESSRRDGSRSTHSDPSLLSE-----------------IQNLDLYKS 952

Query: 181  NKFVVRHMNFCQQSSQLVHLVDSSKVSLRSSLTLAELSACTSGRQLQG-FAEEFPHLDII 240
             +   +   F +                        L ACTSG   QG  A+EFPHLDII
Sbjct: 953  ERNATQEHVFAE------------------------LPACTSGYHSQGVLADEFPHLDII 1012

Query: 241  NDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSGHRV 300
            NDLLD+EN VG + R G+ F SLGN   L +RQFS P ++             G SG   
Sbjct: 1013 NDLLDEENNVGRAVRVGTGFRSLGNCSHLFHRQFSFPSNL-------------GMSG--- 1072

Query: 301  IKMAGSNGGMALPSVVIERTQSYQNGRFQWGYG-SSISRYEPGMDFIPPSSQQQQHLNGQ 360
             +M  SNG         +R +S+ +  F+ GY  SS + ++   +FI P +    + NGQ
Sbjct: 1073 -EMGSSNGACR-----FDRARSFHDDGFRQGYSTSSDNHFDTPREFI-PHANPLPYANGQ 1120

Query: 361  IDGLIP-NWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGINGY 420
            IDGL+P  W   S              SD S+LG R+ D D Y Y N +YSN+A GINGY
Sbjct: 1133 IDGLVPTQWLTPS--------------SDPSLLGMRNTDVDSYPYYNQDYSNLACGINGY 1120

Query: 421  SAFRPSDGH 427
            + FRPS+G+
Sbjct: 1193 TVFRPSNGY 1120

[Close]

BLAST of CmaCh00G004950 vs. TrEMBL
Match: A0A0D2S1U4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247200 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69
Identity = 182/429 (42.42%), Postives = 242/429 (56.41%), Query Frame = 1


Query: 1   MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
           MSRPSSAPL+ GPR    +V+ V T+P LARSVSAA GRLGPD +PAT SY PQSYRNAI
Sbjct: 606 MSRPSSAPLVPGPRPTT-LVSTVQTTPFLARSVSAA-GRLGPDPSPAT-SYVPQSYRNAI 665

Query: 61  IGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFG 120
           +GNH + S AG+   ++ SSGV+   A+S   A+VS+P+++PH+ DR + ++V+S FPFG
Sbjct: 666 MGNHVSSSSAGFTDPNSRSSGVNSLPAYSQPPALVSAPVYIPHSPDRIEPNSVQSGFPFG 725

Query: 121 MVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITILLYLMMFKIYTR 180
           MVTRD LP++PQW+E S+R+  RS H + SLLS                  +    +Y  
Sbjct: 726 MVTRDTLPSAPQWLESSRRDGSRSTHSDPSLLSE-----------------IQNLDLYKS 785

Query: 181 NKFVVRHMNFCQQSSQLVHLVDSSKVSLRSSLTLAELSACTSGRQLQG-FAEEFPHLDII 240
            +   +   F +                        L ACTSG   QG  A+EFPHLDII
Sbjct: 786 ERNATQEHVFAE------------------------LPACTSGYHSQGVLADEFPHLDII 845

Query: 241 NDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSGHRV 300
           NDLLD+EN VG + R G+ F SLGN   L +RQFS P ++             G SG   
Sbjct: 846 NDLLDEENNVGRAVRVGTGFRSLGNCSHLFHRQFSFPSNL-------------GMSG--- 905

Query: 301 IKMAGSNGGMALPSVVIERTQSYQNGRFQWGYG-SSISRYEPGMDFIPPSSQQQQHLNGQ 360
            +M  SNG         +R +S+ +  F+ GY  SS + ++   +FI P +    + NGQ
Sbjct: 906 -EMGSSNGACR-----FDRARSFHDDGFRQGYSTSSDNHFDTPREFI-PHANPLPYANGQ 953

Query: 361 IDGLIP-NWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGINGY 420
           IDGL+P  W   S              SD S+LG R+ D D Y Y N +YSN+A GINGY
Sbjct: 966 IDGLVPTQWLTPS--------------SDPSLLGMRNTDVDSYPYYNQDYSNLACGINGY 953

Query: 421 SAFRPSDGH 427
           + FRPS+G+
Sbjct: 1026 TVFRPSNGY 953

[Close]

BLAST of CmaCh00G004950 vs. TrEMBL
Match: A0A0D2NY13_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247200 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.3e-69
Identity = 182/429 (42.42%), Postives = 242/429 (56.41%), Query Frame = 1


Query: 1   MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
           MSRPSSAPL+ GPR    +V+ V T+P LARSVSAA GRLGPD +PAT SY PQSYRNAI
Sbjct: 512 MSRPSSAPLVPGPRPTT-LVSTVQTTPFLARSVSAA-GRLGPDPSPAT-SYVPQSYRNAI 571

Query: 61  IGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFG 120
           +GNH + S AG+   ++ SSGV+   A+S   A+VS+P+++PH+ DR + ++V+S FPFG
Sbjct: 572 MGNHVSSSSAGFTDPNSRSSGVNSLPAYSQPPALVSAPVYIPHSPDRIEPNSVQSGFPFG 631

Query: 121 MVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITILLYLMMFKIYTR 180
           MVTRD LP++PQW+E S+R+  RS H + SLLS                  +    +Y  
Sbjct: 632 MVTRDTLPSAPQWLESSRRDGSRSTHSDPSLLSE-----------------IQNLDLYKS 691

Query: 181 NKFVVRHMNFCQQSSQLVHLVDSSKVSLRSSLTLAELSACTSGRQLQG-FAEEFPHLDII 240
            +   +   F +                        L ACTSG   QG  A+EFPHLDII
Sbjct: 692 ERNATQEHVFAE------------------------LPACTSGYHSQGVLADEFPHLDII 751

Query: 241 NDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSGHRV 300
           NDLLD+EN VG + R G+ F SLGN   L +RQFS P ++             G SG   
Sbjct: 752 NDLLDEENNVGRAVRVGTGFRSLGNCSHLFHRQFSFPSNL-------------GMSG--- 811

Query: 301 IKMAGSNGGMALPSVVIERTQSYQNGRFQWGYG-SSISRYEPGMDFIPPSSQQQQHLNGQ 360
            +M  SNG         +R +S+ +  F+ GY  SS + ++   +FI P +    + NGQ
Sbjct: 812 -EMGSSNGACR-----FDRARSFHDDGFRQGYSTSSDNHFDTPREFI-PHANPLPYANGQ 859

Query: 361 IDGLIP-NWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGINGY 420
           IDGL+P  W   S              SD S+LG R+ D D Y Y N +YSN+A GINGY
Sbjct: 872 IDGLVPTQWLTPS--------------SDPSLLGMRNTDVDSYPYYNQDYSNLACGINGY 859

Query: 421 SAFRPSDGH 427
           + FRPS+G+
Sbjct: 932 TVFRPSNGY 859

[Close]

BLAST of CmaCh00G004950 vs. TrEMBL
Match: V4RZQ2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004192mg PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.9e-65
Identity = 180/431 (41.76%), Postives = 236/431 (54.76%), Query Frame = 1


Query: 1    MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
            MSRPSSAPL+ GPR  APVV+VVHT+PLLARSVSAA GRLGPDLAPATH Y PQSYRN  
Sbjct: 786  MSRPSSAPLVPGPRPTAPVVSVVHTAPLLARSVSAA-GRLGPDLAPATHGYIPQSYRNVK 845

Query: 61   IGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFG 120
            +GN    S  G  H S+SS G  PS A+S   A+VS+P+F+P NS+R D ++V+S FPF 
Sbjct: 846  MGNPVGSSSPGLTHPSSSSLG--PSPAYSQQQALVSAPIFLPQNSERIDPNSVQSAFPFS 905

Query: 121  MVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITILLYLMMFKIYTR 180
            MVTRDVL +  QW+E SQR+A R +H + S ++  +    L   C+         + Y  
Sbjct: 906  MVTRDVLQSGHQWLESSQRDASRIVHSDPSSMANDIQNLDLY-KCVP-----SGSQEYFS 965

Query: 181  NKFVVRHMNFCQQSSQLVHLVDSSKVSLRSSLTLAELSACTSGRQLQGFAEEFPHLDI-- 240
            N+F         + +Q V LVD                              FPHLDI  
Sbjct: 966  NEFPA---GTSGRQTQGV-LVDE-----------------------------FPHLDIIN 1025

Query: 241  --INDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSG 300
              +    DDE+ VG+++   ++  SL NGP  LNRQFS P D+                 
Sbjct: 1026 DLL----DDEHGVGMAAGASTVLQSLSNGPHTLNRQFSFPRDI----------------- 1085

Query: 301  HRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQHLN 360
                    S+ G +  S   ERT+SY +  FQ GY SS+  ++   +FIP ++    + N
Sbjct: 1086 -----SMSSDIGSSAGSCKFERTRSYHDDGFQRGYSSSVGHFDSVREFIPQAT-ALPYSN 1133

Query: 361  GQIDGLIPNWRAASDLSIDGLIPNW-RAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGIN 420
            GQIDG+IP                W    SDLS++G R+ + +GY Y +PEYSNMA G+N
Sbjct: 1146 GQIDGMIPTM--------------WPMPGSDLSLMGMRNTEGEGYPYFHPEYSNMACGVN 1133

Query: 421  GYSAFRPSDGH 427
            GY+ FRPS+GH
Sbjct: 1206 GYAVFRPSNGH 1133

[Close]

BLAST of CmaCh00G004950 vs. TAIR10
Match: AT1G04300.3 (AT1G04300.3 TRAF-like superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 9.6e-08
Identity = 49/124 (39.52%), Postives = 71/124 (57.26%), Query Frame = 1


Query: 1   MSRPSSAPLILGPRAAAPVVNV-VHTSPLLARSVSAAAGRLGPDLAPATHS---YAPQSY 60
           +SRPSSAP+I   R +   V+  V T+  L RSVS+A GRLGPD  P+ H+   Y PQSY
Sbjct: 791 ISRPSSAPIIPAMRPSPITVSSSVQTTTSLPRSVSSA-GRLGPD--PSLHNQQTYTPQSY 850

Query: 61  RNAIIGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNS-DRSDLSAVRS 120
           +NAI+GN    S + + H   SS GV P++              +P +S  ++  S+ +S
Sbjct: 851 KNAIVGNSLGSSSSSFNH-HPSSHGVVPTT--------------LPSSSYSQAPTSSYQS 896

[Close]

BLAST of CmaCh00G004950 vs. TAIR10
Match: AT5G43560.1 (AT5G43560.1 TRAF-like superfamily protein)

HSP 1 Score: 55.5 bits (132), Expect = 9.6e-08
Identity = 55/140 (39.29%), Postives = 73/140 (52.14%), Query Frame = 1


Query: 1   MSRPSSAPLILGPRAAAPVVNVVHTSPL-LARSVSAAAGRLGPDLAPATHS--YAPQSYR 60
           MSRP SAP I+ P  AAPV++ V TS   LARS+S + GRLG      THS  Y PQSY+
Sbjct: 763 MSRPLSAP-IIPPTQAAPVISAVQTSTASLARSMS-STGRLG----SPTHSQAYNPQSYK 822

Query: 61  NAIIGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNF 120
           +AI+G+      +G+ H S+ SSG S    +S       SP+ V +          +S F
Sbjct: 823 HAIVGS------SGFTHPSSQSSGTSTLPPYS-----HPSPISVSN----------QSGF 875

Query: 121 PFGMVTRDVLPNSPQWVEGS 138
           P  + + DV      W  GS
Sbjct: 883 PINVGSWDVSSGGLLWTGGS 875

[Close]

BLAST of CmaCh00G004950 vs. NCBI nr
Match: gi|659076227|ref|XP_008438566.1| (PREDICTED: MATH domain-containing protein At5g43560 isoform X2 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 9.1e-85
Identity = 221/430 (51.40%), Postives = 254/430 (59.07%), Query Frame = 1


Query: 1    MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
            MSRPSSAPLI GPRA APVVNVVHTSPLLARSVSAA GRLGPD APATHSY         
Sbjct: 790  MSRPSSAPLIPGPRATAPVVNVVHTSPLLARSVSAA-GRLGPDPAPATHSY--------- 849

Query: 61   IGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFG 120
                 AP        +   + V+PS+A  +            H S  +  S V  +  F 
Sbjct: 850  -----APQS---YRNAIMGNHVAPSTAGYV------------HLS--TSTSGVSPSTAFS 909

Query: 121  MVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITI-LLYLMMFKIYT 180
            + +  V  +SP +V            ++S  L P   R     + +T  +L      +  
Sbjct: 910  LASAMV--SSPMYVP-----------HSSERLDPNAVRSTYPFSMVTRDVLPNSPQWVEG 969

Query: 181  RNKFVVRHMNFCQQSSQLVHLVDSSKVSLRSS---LTLAELSACTSGRQLQGFAEEFPHL 240
              +  VR M++   SS L  + D  K  +R S   +  AE  ACTSGRQLQGFAEEFPHL
Sbjct: 970  SQRETVRSMHY--NSSLLNDVQDLYKKPIRGSTPDVLSAEFPACTSGRQLQGFAEEFPHL 1029

Query: 241  DIINDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSG 300
            DIINDLLDDENIVGIS+RD SMF SLGNGP+LLNRQFSLPGDM G AGD           
Sbjct: 1030 DIINDLLDDENIVGISARDNSMFQSLGNGPTLLNRQFSLPGDMGGMAGD----------- 1089

Query: 301  HRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQHLN 360
                       G +  S   ERT+SY +G FQ GY SSIS YEP MDFIPPSS QQQHLN
Sbjct: 1090 ----------VGSSTSSCRFERTRSYHDGGFQRGYTSSISHYEPTMDFIPPSS-QQQHLN 1135

Query: 361  GQIDGLIPNWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGING 420
            GQIDGL+PNWRA SDLS+               LGTR+LDFDGYQYLN EYSNMAHG+NG
Sbjct: 1150 GQIDGLVPNWRATSDLSL---------------LGTRTLDFDGYQYLNAEYSNMAHGMNG 1135

Query: 421  YSAFRPSDGH 427
            Y+ FRPSDGH
Sbjct: 1210 YNIFRPSDGH 1135

[Close]

BLAST of CmaCh00G004950 vs. NCBI nr
Match: gi|659076223|ref|XP_008438564.1| (PREDICTED: MATH domain-containing protein At5g43560 isoform X1 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 9.1e-85
Identity = 221/430 (51.40%), Postives = 254/430 (59.07%), Query Frame = 1


Query: 1    MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
            MSRPSSAPLI GPRA APVVNVVHTSPLLARSVSAA GRLGPD APATHSY         
Sbjct: 791  MSRPSSAPLIPGPRATAPVVNVVHTSPLLARSVSAA-GRLGPDPAPATHSY--------- 850

Query: 61   IGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFG 120
                 AP        +   + V+PS+A  +            H S  +  S V  +  F 
Sbjct: 851  -----APQS---YRNAIMGNHVAPSTAGYV------------HLS--TSTSGVSPSTAFS 910

Query: 121  MVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITI-LLYLMMFKIYT 180
            + +  V  +SP +V            ++S  L P   R     + +T  +L      +  
Sbjct: 911  LASAMV--SSPMYVP-----------HSSERLDPNAVRSTYPFSMVTRDVLPNSPQWVEG 970

Query: 181  RNKFVVRHMNFCQQSSQLVHLVDSSKVSLRSS---LTLAELSACTSGRQLQGFAEEFPHL 240
              +  VR M++   SS L  + D  K  +R S   +  AE  ACTSGRQLQGFAEEFPHL
Sbjct: 971  SQRETVRSMHY--NSSLLNDVQDLYKKPIRGSTPDVLSAEFPACTSGRQLQGFAEEFPHL 1030

Query: 241  DIINDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSG 300
            DIINDLLDDENIVGIS+RD SMF SLGNGP+LLNRQFSLPGDM G AGD           
Sbjct: 1031 DIINDLLDDENIVGISARDNSMFQSLGNGPTLLNRQFSLPGDMGGMAGD----------- 1090

Query: 301  HRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQHLN 360
                       G +  S   ERT+SY +G FQ GY SSIS YEP MDFIPPSS QQQHLN
Sbjct: 1091 ----------VGSSTSSCRFERTRSYHDGGFQRGYTSSISHYEPTMDFIPPSS-QQQHLN 1136

Query: 361  GQIDGLIPNWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGING 420
            GQIDGL+PNWRA SDLS+               LGTR+LDFDGYQYLN EYSNMAHG+NG
Sbjct: 1151 GQIDGLVPNWRATSDLSL---------------LGTRTLDFDGYQYLNAEYSNMAHGMNG 1136

Query: 421  YSAFRPSDGH 427
            Y+ FRPSDGH
Sbjct: 1211 YNIFRPSDGH 1136

[Close]

BLAST of CmaCh00G004950 vs. NCBI nr
Match: gi|659076229|ref|XP_008438567.1| (PREDICTED: MATH domain-containing protein At5g43560 isoform X3 [Cucumis melo])

HSP 1 Score: 322.8 bits (826), Expect = 9.1e-85
Identity = 221/430 (51.40%), Postives = 254/430 (59.07%), Query Frame = 1


Query: 1    MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
            MSRPSSAPLI GPRA APVVNVVHTSPLLARSVSAA GRLGPD APATHSY         
Sbjct: 673  MSRPSSAPLIPGPRATAPVVNVVHTSPLLARSVSAA-GRLGPDPAPATHSY--------- 732

Query: 61   IGNHAAPSGAGYVHLSTSSSGVSPSSAFSLTSAMVSSPMFVPHNSDRSDLSAVRSNFPFG 120
                 AP        +   + V+PS+A  +            H S  +  S V  +  F 
Sbjct: 733  -----APQS---YRNAIMGNHVAPSTAGYV------------HLS--TSTSGVSPSTAFS 792

Query: 121  MVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITI-LLYLMMFKIYT 180
            + +  V  +SP +V            ++S  L P   R     + +T  +L      +  
Sbjct: 793  LASAMV--SSPMYVP-----------HSSERLDPNAVRSTYPFSMVTRDVLPNSPQWVEG 852

Query: 181  RNKFVVRHMNFCQQSSQLVHLVDSSKVSLRSS---LTLAELSACTSGRQLQGFAEEFPHL 240
              +  VR M++   SS L  + D  K  +R S   +  AE  ACTSGRQLQGFAEEFPHL
Sbjct: 853  SQRETVRSMHY--NSSLLNDVQDLYKKPIRGSTPDVLSAEFPACTSGRQLQGFAEEFPHL 912

Query: 241  DIINDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAGSSG 300
            DIINDLLDDENIVGIS+RD SMF SLGNGP+LLNRQFSLPGDM G AGD           
Sbjct: 913  DIINDLLDDENIVGISARDNSMFQSLGNGPTLLNRQFSLPGDMGGMAGD----------- 972

Query: 301  HRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQHLN 360
                       G +  S   ERT+SY +G FQ GY SSIS YEP MDFIPPSS QQQHLN
Sbjct: 973  ----------VGSSTSSCRFERTRSYHDGGFQRGYTSSISHYEPTMDFIPPSS-QQQHLN 1018

Query: 361  GQIDGLIPNWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHGING 420
            GQIDGL+PNWRA SDLS+               LGTR+LDFDGYQYLN EYSNMAHG+NG
Sbjct: 1033 GQIDGLVPNWRATSDLSL---------------LGTRTLDFDGYQYLNAEYSNMAHGMNG 1018

Query: 421  YSAFRPSDGH 427
            Y+ FRPSDGH
Sbjct: 1093 YNIFRPSDGH 1018

[Close]

BLAST of CmaCh00G004950 vs. NCBI nr
Match: gi|449432602|ref|XP_004134088.1| (PREDICTED: MATH domain-containing protein At5g43560 isoform X1 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.7e-83
Identity = 220/433 (50.81%), Postives = 252/433 (58.20%), Query Frame = 1


Query: 1    MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
            MSRPSSAPLI GPRA APVVNVVHTSPLLARSVSAA GRLGPD APATHSY         
Sbjct: 791  MSRPSSAPLIPGPRATAPVVNVVHTSPLLARSVSAA-GRLGPDPAPATHSY--------- 850

Query: 61   IGNHAAPSGAGYVHLSTSSSGVSPSSAFSL---TSAMVSSPMFVPHNSDRSDLSAVRSNF 120
                 AP        +   + V+PS+A  +   TS   +SP                 + 
Sbjct: 851  -----APQS---YRNAIMGNHVAPSTAGYVHLSTSTSGASP-----------------ST 910

Query: 121  PFGMVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITI-LLYLMMFK 180
             F + +  V  +SP +V            +NS  L P   R     + +T  +L      
Sbjct: 911  AFSLASAMV--SSPMYVP-----------HNSERLDPNAVRSSYPFSMVTRDVLPNSPQW 970

Query: 181  IYTRNKFVVRHMNFCQQSSQLVHLVDSSKVSLRSS---LTLAELSACTSGRQLQGFAEEF 240
            +    +  VR M++   S  L  + D  K  +R S   +  AE  ACTSGRQLQGFAEEF
Sbjct: 971  VEGSQREAVRSMHY--NSPLLNDVQDLYKKPIRGSTPDVLSAEFPACTSGRQLQGFAEEF 1030

Query: 241  PHLDIINDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAG 300
            PHLDIINDLLDDENIVGIS+RD SMF SLGNGP+LLNRQFSLPGDM G AGD        
Sbjct: 1031 PHLDIINDLLDDENIVGISARDNSMFQSLGNGPTLLNRQFSLPGDMGGMAGD-------- 1090

Query: 301  SSGHRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQ 360
                          G +  S   ERT+SY +G F  GY SSIS YEP MDFIPPSS QQQ
Sbjct: 1091 -------------VGSSTSSCRFERTRSYHDGGFHRGYTSSISHYEPTMDFIPPSS-QQQ 1136

Query: 361  HLNGQIDGLIPNWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHG 420
            HLNGQIDGL+PNWRA SDLS+               LGTR+LDFDGYQYLN EYSNMAHG
Sbjct: 1151 HLNGQIDGLVPNWRATSDLSL---------------LGTRTLDFDGYQYLNAEYSNMAHG 1136

Query: 421  INGYSAFRPSDGH 427
            +NGY+ FRPSDGH
Sbjct: 1211 MNGYNVFRPSDGH 1136

[Close]

BLAST of CmaCh00G004950 vs. NCBI nr
Match: gi|778678289|ref|XP_011650943.1| (PREDICTED: MATH domain-containing protein At5g43560 isoform X2 [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.7e-83
Identity = 220/433 (50.81%), Postives = 252/433 (58.20%), Query Frame = 1


Query: 1    MSRPSSAPLILGPRAAAPVVNVVHTSPLLARSVSAAAGRLGPDLAPATHSYAPQSYRNAI 60
            MSRPSSAPLI GPRA APVVNVVHTSPLLARSVSAA GRLGPD APATHSY         
Sbjct: 790  MSRPSSAPLIPGPRATAPVVNVVHTSPLLARSVSAA-GRLGPDPAPATHSY--------- 849

Query: 61   IGNHAAPSGAGYVHLSTSSSGVSPSSAFSL---TSAMVSSPMFVPHNSDRSDLSAVRSNF 120
                 AP        +   + V+PS+A  +   TS   +SP                 + 
Sbjct: 850  -----APQS---YRNAIMGNHVAPSTAGYVHLSTSTSGASP-----------------ST 909

Query: 121  PFGMVTRDVLPNSPQWVEGSQREAVRSMHYNSSLLSPRVHRGKLLGACITI-LLYLMMFK 180
             F + +  V  +SP +V            +NS  L P   R     + +T  +L      
Sbjct: 910  AFSLASAMV--SSPMYVP-----------HNSERLDPNAVRSSYPFSMVTRDVLPNSPQW 969

Query: 181  IYTRNKFVVRHMNFCQQSSQLVHLVDSSKVSLRSS---LTLAELSACTSGRQLQGFAEEF 240
            +    +  VR M++   S  L  + D  K  +R S   +  AE  ACTSGRQLQGFAEEF
Sbjct: 970  VEGSQREAVRSMHY--NSPLLNDVQDLYKKPIRGSTPDVLSAEFPACTSGRQLQGFAEEF 1029

Query: 241  PHLDIINDLLDDENIVGISSRDGSMFNSLGNGPSLLNRQFSLPGDMVGKAGDGPPRALAG 300
            PHLDIINDLLDDENIVGIS+RD SMF SLGNGP+LLNRQFSLPGDM G AGD        
Sbjct: 1030 PHLDIINDLLDDENIVGISARDNSMFQSLGNGPTLLNRQFSLPGDMGGMAGD-------- 1089

Query: 301  SSGHRVIKMAGSNGGMALPSVVIERTQSYQNGRFQWGYGSSISRYEPGMDFIPPSSQQQQ 360
                          G +  S   ERT+SY +G F  GY SSIS YEP MDFIPPSS QQQ
Sbjct: 1090 -------------VGSSTSSCRFERTRSYHDGGFHRGYTSSISHYEPTMDFIPPSS-QQQ 1135

Query: 361  HLNGQIDGLIPNWRAASDLSIDGLIPNWRAASDLSVLGTRSLDFDGYQYLNPEYSNMAHG 420
            HLNGQIDGL+PNWRA SDLS+               LGTR+LDFDGYQYLN EYSNMAHG
Sbjct: 1150 HLNGQIDGLVPNWRATSDLSL---------------LGTRTLDFDGYQYLNAEYSNMAHG 1135

Query: 421  INGYSAFRPSDGH 427
            +NGY+ FRPSDGH
Sbjct: 1210 MNGYNVFRPSDGH 1135

The following BLAST results are available for this feature:

BLAST of CmaCh00G004950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y5436_ARATH	1.7e-06	39.29	MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana GN=At5g43560 PE...	[more]

BLAST of CmaCh00G004950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4I5_CUCSA	1.2e-83	50.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G142930 PE=4 SV=1	[more]
A0A0D2T3W5_GOSRA	1.3e-69	42.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247200 PE=4 SV=1	[more]
A0A0D2S1U4_GOSRA	1.3e-69	42.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247200 PE=4 SV=1	[more]
A0A0D2NY13_GOSRA	1.3e-69	42.42	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G247200 PE=4 SV=1	[more]
V4RZQ2_9ROSI	1.9e-65	41.76	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004192mg PE=4 SV=1	[more]

BLAST of CmaCh00G004950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04300.3	9.6e-08	39.52	TRAF-like superfamily protein	[more]
AT5G43560.1	9.6e-08	39.29	TRAF-like superfamily protein	[more]

BLAST of CmaCh00G004950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076227\|ref\|XP_008438566.1\|	9.1e-85	51.40	PREDICTED: MATH domain-containing protein At5g43560 isoform X2 [Cucumis melo]	[more]
gi\|659076223\|ref\|XP_008438564.1\|	9.1e-85	51.40	PREDICTED: MATH domain-containing protein At5g43560 isoform X1 [Cucumis melo]	[more]
gi\|659076229\|ref\|XP_008438567.1\|	9.1e-85	51.40	PREDICTED: MATH domain-containing protein At5g43560 isoform X3 [Cucumis melo]	[more]
gi\|449432602\|ref\|XP_004134088.1\|	1.7e-83	50.81	PREDICTED: MATH domain-containing protein At5g43560 isoform X1 [Cucumis sativus]	[more]
gi\|778678289\|ref\|XP_011650943.1\|	1.7e-83	50.81	PREDICTED: MATH domain-containing protein At5g43560 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G004950.1	CmaCh00G004950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24006	FAMILY NOT NAMED	coord: 1..63 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh00G004950	Silver-seed gourd	carcmaB1318
CmaCh00G004950	Cucumber (Chinese Long) v3	cmacucB0002
CmaCh00G004950	Watermelon (97103) v2	cmawmbB002
CmaCh00G004950	Cucurbita maxima (Rimu)	cmacmaB003
CmaCh00G004950	Cucurbita maxima (Rimu)	cmacmaB015
CmaCh00G004950	Cucurbita maxima (Rimu)	cmacmaB027
CmaCh00G004950	Cucurbita moschata (Rifu)	cmacmoB012
CmaCh00G004950	Cucurbita moschata (Rifu)	cmacmoB017
CmaCh00G004950	Wild cucumber (PI 183967)	cmacpiB003
CmaCh00G004950	Cucumber (Chinese Long) v2	cmacuB003
CmaCh00G004950	Melon (DHL92) v3.5.1	cmameB003
CmaCh00G004950	Watermelon (97103) v1	cmawmB003
CmaCh00G004950	Cucurbita pepo (Zucchini)	cmacpeB019
CmaCh00G004950	Bottle gourd (USVL1VR-Ls)	cmalsiB010
CmaCh00G004950	Cucumber (Gy14) v2	cgybcmaB275
CmaCh00G004950	Melon (DHL92) v3.6.1	cmamedB002
CmaCh00G004950	Silver-seed gourd	carcmaB0323