CmaCh00G004260 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh00G004260
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transmembrane protein, putative
Location	Cma_Chr00 : 32661617 .. 32663892 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTACCAATGTTTAAAACACATCCGCCATTGACGACCACGAATGAAGCTTTGATCGATCCATATGGGAAGGAGAAAAGCTATGGCGGTAACACATGAGGATCTTCACCCAAGTCGAAGGAGCTCTGAATTAGGCAGCAAAATGGGGACTTTTCTCATCATTTTAACCGTCCTTTGTGGCCTTTGTTGCTTCATTCTTTGCCTCGTTGCCGAGTCCACTCGTTCTCAGGTACGTATCTTACCGACCCTTTTGACGATTTTTGTGTTCGGTATGATCTTGTCAATAGAAATGTCTATTTAACCCTCGAGGCTGAAGAATAGGGTAAAAGAGTAAGAAGAGATTTCTCTTCGTTAGCTAAATTGAGCTAGAGATGAGAATATATTCTTTGTCTATAACAGCTAAAGTCCACTGCTACTAGATATTGTCCTCTTTGAACTTTCCCTTTCGAGCTTCCCCTCAAGGTATACCACTAGTTAATTTATGTCCCACATCGGTTGGAGGGGAGAATGCAACACCCTAAGGTGAAAATCTCTTCCTAGCAGACGCGTTTTAAAGAAGCCTTGAGGGGAAGTCCAAGAGGGAAAATCCAAAAAGGACAATATCCGTTAATATGAGCTTGAGCTGTTACATTGTCCCTGTCATTGTACACCGAGCCCACCTCGCCCCTACCTCACATATATGTATATCATTGGATTTATTAGAATGTTTTAGGTATATTAAAAAAATTAAAATTCTAATATTGCGAGAATAAAAATGAAATAGGTGACCGAATGGAGCATGTTTTTTAAAAAATTAAAATTCTAATATTGCGAGAATAAAAATGAAATAGGTGACCGAATGGAGCATGTTTTTTTAACAACCTAGGAGGAGCTAGGTTTAGATATGGGTTTGCATGTTTTTTCTGACCTTTTTCATAGGTGATATGGATGGGTAGAGACGAGAATAATAACAAGAAGGGAGAGAAGAGATGCTGGTACAGCGGCAGTGGGAAGACGCCGCTGGTGTGCACGGCGAGCGCGTTTCTTGGCATGGCGGTGATGATGGTGGTGCAACATTTGTACGTGTTGATTGCAGTGAGTAAGTCGCCGCCGCCTGCTCTCATTGCTTGGGACCCTTCTTTTGCCACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGTAATCATCTACACCTCCATTATTTCTCTCCTTTATTCAAACCCAAGTTAAGCATATTCCTTCACCCCAACTTAATACTTTTCATATTCGAGCATATTACACAACCTAAGCCCACCAATAACAAATATTGTTCTTTTTAGATTTTCCCTTTCAGGGTTCTCCTCAAAGTTTTTAAAACACGTCTCTAGTGAGAGGTTTTCACACCCTTATAAAGAATGTTCCGTTCTTCCCTCAATCGATGTGGGATCTCACAAAAGTCCAAAAATGACAATATTTGCTCGTGATGAGCTTGGTGTTACAAATGGTATCAGAGGCAGACACCGAGCGATATGCCAGCAAAGATGCTGGGCCTCGAAGGAATTGGATTGAAGGAGTCCCAGATCGATTGGAGAAGGGAACGAGTGCCTGAAAAAACGGTGGGTCACGACAAAGAGTGGATTATGATATTCTTTATAAGGGTGTGAAACCTATTCCTATCCTACAGGTTTTTAAAATTTTGAGGGAAAGCCCGAAATAAAAAACCTAAAAAAGATAACATTTGCTAAGAGTGGACTTGCCTAGTTGAAACATTCGTTTGATGGCACTCTCATTTTCATATGGGGTGGTTTGTTTTTGGTTGGCAGGATAAGTTTCTCAGTGGGAGAAATTTTACTGTTGATTGGATTGAGCGTAGAATCAGGTCATCTCAAGGACTGGTGGAGTCCAAAAGAGAGTTGCTTGGTGATCAAAGAAGGTTTGTTCTCAGCAGCAGGAGTTTTTGAGCTGGCGACGGTGTTCCTCGCCGCCGGTCTATACATGACGGCGGTACGAGCACAGAGATTGTTTGAAGATCAAGTAAACGTGAGAAGAGAGGTGCTGGAAAGTTACCATATCCACAGTTCGCCGCCCCGGTCACCACCGCTGCAGCCGATGCCGCCAATTGCGAGAGAGGACCCTGTGATCAGACATAGCCATCATCCAGAGTCTCCCTTTTTGTTCCTGCTCCCATCTTCAGCTGCTTTCTGCAAACAGCTCTCTCGTTGATTATTATTATTATTTTTTTAAAGGAGATGGTCTTATGAATTTGTATAAAATAGGTTAAATTCTATTTTGATTCGGTT

mRNA sequence

TTTATTACCAATGTTTAAAACACATCCGCCATTGACGACCACGAATGAAGCTTTGATCGATCCATATGGGAAGGAGAAAAGCTATGGCGGTAACACATGAGGATCTTCACCCAAGTCGAAGGAGCTCTGAATTAGGCAGCAAAATGGGGACTTTTCTCATCATTTTAACCGTCCTTTGTGGCCTTTGTTGCTTCATTCTTTGCCTCGTTGCCGAGTCCACTCGTTCTCAGGTGATATGGATGGGTAGAGACGAGAATAATAACAAGAAGGGAGAGAAGAGATGCTGGTACAGCGGCAGTGGGAAGACGCCGCTGGTGTGCACGGCGAGCGCGTTTCTTGGCATGGCGGTGATGATGGTGGTGCAACATTTGTACGTGTTGATTGCAGTGAGTAAGTCGCCGCCGCCTGCTCTCATTGCTTGGGACCCTTCTTTTGCCACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGATAAGTTTCTCAGTGGGAGAAATTTTACTGTTGATTGGATTGAGCGTAGAATCAGGTCATCTCAAGGACTGGTGGAGTCCAAAAGAGAGTTGCTTGGTGATCAAAGAAGGTTTGTTCTCAGCAGCAGGAGTTTTTGAGCTGGCGACGGTGTTCCTCGCCGCCGGTCTATACATGACGGCGGTACGAGCACAGAGATTGTTTGAAGATCAAGTAAACGTGAGAAGAGAGGTGCTGGAAAGTTACCATATCCACAGTTCGCCGCCCCGGTCACCACCGCTGCAGCCGATGCCGCCAATTGCGAGAGAGGACCCTGTGATCAGACATAGCCATCATCCAGAGTCTCCCTTTTTGTTCCTGCTCCCATCTTCAGCTGCTTTCTGCAAACAGCTCTCTCGTTGATTATTATTATTATTTTTTTAAAGGAGATGGTCTTATGAATTTGTATAAAATAGGTTAAATTCTATTTTGATTCGGTT

Coding sequence (CDS)

ATGGGAAGGAGAAAAGCTATGGCGGTAACACATGAGGATCTTCACCCAAGTCGAAGGAGCTCTGAATTAGGCAGCAAAATGGGGACTTTTCTCATCATTTTAACCGTCCTTTGTGGCCTTTGTTGCTTCATTCTTTGCCTCGTTGCCGAGTCCACTCGTTCTCAGGTGATATGGATGGGTAGAGACGAGAATAATAACAAGAAGGGAGAGAAGAGATGCTGGTACAGCGGCAGTGGGAAGACGCCGCTGGTGTGCACGGCGAGCGCGTTTCTTGGCATGGCGGTGATGATGGTGGTGCAACATTTGTACGTGTTGATTGCAGTGAGTAAGTCGCCGCCGCCTGCTCTCATTGCTTGGGACCCTTCTTTTGCCACTTCCAAATCTCTAACCTTTCAAGCTGCTTTCTTCTTCGTTTCAACATGGATAAGTTTCTCAGTGGGAGAAATTTTACTGTTGATTGGATTGAGCGTAGAATCAGGTCATCTCAAGGACTGGTGGAGTCCAAAAGAGAGTTGCTTGGTGATCAAAGAAGGTTTGTTCTCAGCAGCAGGAGTTTTTGAGCTGGCGACGGTGTTCCTCGCCGCCGGTCTATACATGACGGCGGTACGAGCACAGAGATTGTTTGAAGATCAAGTAAACGTGAGAAGAGAGGTGCTGGAAAGTTACCATATCCACAGTTCGCCGCCCCGGTCACCACCGCTGCAGCCGATGCCGCCAATTGCGAGAGAGGACCCTGTGATCAGACATAGCCATCATCCAGAGTCTCCCTTTTTGTTCCTGCTCCCATCTTCAGCTGCTTTCTGCAAACAGCTCTCTCGTTGA

Protein sequence

MGRRKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPIAREDPVIRHSHHPESPFLFLLPSSAAFCKQLSR

Homology

[Close]

BLAST of CmaCh00G004260 vs. TrEMBL
Match: A0A0A0L805_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165660 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 2.3e-120
Identity = 231/268 (86.19%), Postives = 246/268 (91.79%), Query Frame = 1


Query: 7   MAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDENNN 66
           MAVTH+DL PS +SSELGSKMGTFLIILT+LCGLCCFILCL+AE+TRSQVIWMG DENN 
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 67  KKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFATS 126
           +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIAWDPSFATS
Sbjct: 61  EK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATS 120

Query: 127 KSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAAGVF 186
           KSLTFQAAFFFVSTWISF+VGEILLLIGLSVESGHL +W +PKESCLVIKEGLFSAAGVF
Sbjct: 121 KSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVF 180

Query: 187 ELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR---SPPLQPMPPIARE 246
           +LATVFLAAGLYMTAVRAQR+FE Q NVRREVLESYHIHSSPPR   SPPLQPMPPIARE
Sbjct: 181 QLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARE 240

Query: 247 DPVIRHS-HHPE-SPFLFLLPSSAAFCK 270
           DPVIRHS HH E +PF  LL S+A FCK
Sbjct: 241 DPVIRHSQHHQERAPFWSLLQSTAPFCK 266

[Close]

BLAST of CmaCh00G004260 vs. TrEMBL
Match: V4U0C6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007083mg PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.5e-83
Identity = 161/267 (60.30%), Postives = 210/267 (78.65%), Query Frame = 1


Query: 5   KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDEN 64
           K  A+TH DL PS + +E GSK G  LI+ T+LCGLCCFILCL+AE+TRSQ+ W    E+
Sbjct: 3   KRTAITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTW----ES 62

Query: 65  NNKKGEK-RCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSF 124
            +KKGE+ +C YSGSGK PL+C A+AF+G+AV MV++H+Y+LIA+SKSPPPAL++WDP++
Sbjct: 63  THKKGEENQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNY 122

Query: 125 ATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAA 184
              KSLT+QA FFFV+TWI F+VGEILLLIGLSVESGHLK+W  P+ +CLVIK+GLFSAA
Sbjct: 123 LPVKSLTWQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLVIKQGLFSAA 182

Query: 185 GVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPIARE 244
           GVF L  VFLAAGLY+TA+RAQR+ ++Q +VRREVLE+  +++SPP+SP L  +  +ARE
Sbjct: 183 GVFALLAVFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQSPRLSIITTMARE 242

Query: 245 DPVIRHSHHPESPFLFLLPSSAAFCKQ 271
           +PV R +   E        S A+F K+
Sbjct: 243 NPVRRENQLEEQQQSTWASSFASFSKR 265

[Close]

BLAST of CmaCh00G004260 vs. TrEMBL
Match: A0A061ENR4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 8.5e-83
Identity = 160/252 (63.49%), Postives = 203/252 (80.56%), Query Frame = 1


Query: 5   KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDEN 64
           K +AVTH DL PSRRS+ELGS+ G  L++LT+LCGL CFILCL+AE+TRSQ  W+G D  
Sbjct: 13  KTVAVTHADLAPSRRSTELGSRTGVVLMVLTILCGLFCFILCLIAEATRSQERWVGTD-T 72

Query: 65  NNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFA 124
           N K+ +  C YSGSGKTPL+C A AF+G+A  MVV+H+Y+LIAVSKSPPPAL++WDP  +
Sbjct: 73  NRKEVKNECAYSGSGKTPLLCAAVAFVGLAAAMVVEHMYMLIAVSKSPPPALLSWDPVSS 132

Query: 125 TSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAAG 184
            +K+LT+QA FFFV TW+ FSVGEILLLIGLSVESGHLK+W  P+ESCL+I+EGLF AAG
Sbjct: 133 RAKTLTWQAGFFFVMTWLCFSVGEILLLIGLSVESGHLKNWSKPRESCLIIREGLFCAAG 192

Query: 185 VFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPIARED 244
           VF L TVFLAAGLY+TA+ AQ++F++Q NV++EVL +  +++SPP SPP   M  +ARED
Sbjct: 193 VFSLLTVFLAAGLYLTALHAQKMFQEQRNVQQEVLATSALYASPPGSPP-HRMTTVARED 252

Query: 245 PVIRHSHHPESP 257
           P+I  +  P  P
Sbjct: 253 PMI--TEFPNEP 260

[Close]

BLAST of CmaCh00G004260 vs. TrEMBL
Match: W9QW85_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007751 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.5e-82
Identity = 154/259 (59.46%), Postives = 204/259 (78.76%), Query Frame = 1


Query: 5   KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDEN 64
           K M VTH DL PSRR ++LGSK+G FLI+LT+LCGL CFILCL+AE+TRS++ W+   + 
Sbjct: 3   KTMVVTHADLAPSRRRTDLGSKLGVFLIVLTILCGLFCFILCLIAEATRSEMTWIANGDK 62

Query: 65  NNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFA 124
            +K+    C YSGSGK PL+C ASAF+G+A+ M+++H ++LIAVSK PP AL+  D    
Sbjct: 63  GSKEERYECVYSGSGKMPLLCAASAFVGLAIAMMIEHTFMLIAVSKLPPSALVCLDTDSG 122

Query: 125 TSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAAG 184
           +S++LT+QA FFF++TWI F+VGEILLLIGLSVESGHLK+W  P+ SC VI+EG+FSAAG
Sbjct: 123 SSRTLTWQAGFFFLTTWICFAVGEILLLIGLSVESGHLKNWSRPRPSCFVIREGIFSAAG 182

Query: 185 VFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPIARED 244
           VF LA+VFLAAGLY+TA+RAQR+ ++Q NVR+++LE+  +++SPPRSP    +  IARED
Sbjct: 183 VFALASVFLAAGLYLTALRAQRMSQEQENVRQQILEASALYASPPRSPGRHHIAAIARED 242

Query: 245 PVIRHSHHPESP-FLFLLP 263
           PV R  H  + P F+F LP
Sbjct: 243 PVFREDHSNDQPSFVFSLP 261

[Close]

BLAST of CmaCh00G004260 vs. TrEMBL
Match: A0A067FWV7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035800mg PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.5e-82
Identity = 159/267 (59.55%), Postives = 209/267 (78.28%), Query Frame = 1


Query: 5   KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDEN 64
           K  A+TH DL PS + +E GSK G  LI+ T+LCGLCCFILCL+AE+TRSQ+ W    E+
Sbjct: 3   KRTAITHADLAPSPQGTEFGSKTGVVLIVSTILCGLCCFILCLIAEATRSQMTW----ES 62

Query: 65  NNKKG-EKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSF 124
            +K+G E +C YSGSGK PL+C A+AF+G+AV MV++H+Y+LIA+SKSPPPAL++WDP++
Sbjct: 63  THKRGVENQCVYSGSGKLPLLCAATAFVGLAVAMVIEHMYMLIAISKSPPPALVSWDPNY 122

Query: 125 ATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAA 184
              KSLT+QA FFFV+TWI F+VGEILLLIGLSVESGHLK+W  P+ +CL+IK+GLFSAA
Sbjct: 123 LPVKSLTWQAGFFFVTTWICFAVGEILLLIGLSVESGHLKNWSRPRPNCLIIKQGLFSAA 182

Query: 185 GVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPIARE 244
           GVF L  VFLAAGLY+TA+RAQR+ ++Q +VRREVLE+  +++SPP+SP L  +  +ARE
Sbjct: 183 GVFALLAVFLAAGLYLTALRAQRISQEQEHVRREVLEASALYASPPQSPRLSIITTMARE 242

Query: 245 DPVIRHSHHPESPFLFLLPSSAAFCKQ 271
           +PV R +   E        S A+F K+
Sbjct: 243 NPVRRENQLEEQQQSTWASSFASFSKR 265

[Close]

BLAST of CmaCh00G004260 vs. TAIR10
Match: AT5G49320.1 (AT5G49320.1 Protein of unknown function (DUF1218))

HSP 1 Score: 267.7 bits (683), Expect = 7.9e-72
Identity = 137/243 (56.38%), Postives = 177/243 (72.84%), Query Frame = 1


Query: 1   MGRRKAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMG 60
           M R +  AVTH+DL P+ ++++L SK G F+ +LT++ GL CF+LCL AE+TRSQ  W  
Sbjct: 1   MSRTRVRAVTHQDLVPNPKTTDLSSKTGIFIAVLTIIFGLSCFVLCLYAEATRSQATW-- 60

Query: 61  RDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWD 120
                   G K C Y+GSGKTPL+C A AF+G+AV MV  H+Y+LIAV+ SP   L+ WD
Sbjct: 61  --------GSKTCVYNGSGKTPLLCGAIAFVGLAVAMVGFHMYLLIAVTTSPSLVLVEWD 120

Query: 121 PSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLF 180
           P    +K LTFQAAFFFVSTW+ F VGE+LLL+ LSVESGHLK+W  PK SCLVI++GLF
Sbjct: 121 PDSVPAKRLTFQAAFFFVSTWVCFGVGEVLLLVALSVESGHLKNWSKPKPSCLVIRQGLF 180

Query: 181 SAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPI 240
           SAAGVF L TVFLA GLY+TA++A R+ +D  N  RE++E+  +++SPPRS P   M  +
Sbjct: 181 SAAGVFSLITVFLATGLYLTALQAHRISKDLENTHREIIEASVLYASPPRS-PTNRMATV 232

Query: 241 ARE 244
           ARE
Sbjct: 241 ARE 232

[Close]

BLAST of CmaCh00G004260 vs. NCBI nr
Match: gi|449433425|ref|XP_004134498.1| (PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus])

HSP 1 Score: 444.1 bits (1141), Expect = 1.7e-121
Identity = 236/275 (85.82%), Postives = 251/275 (91.27%), Query Frame = 1


Query: 1   MGRRKA-MAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWM 60
           MGRRK  MAVTH+DL PS +SSELGSKMGTFLIILT+LCGLCCFILCL+AE+TRSQVIWM
Sbjct: 1   MGRRKKNMAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWM 60

Query: 61  GRDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAW 120
           G DENN +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIAW
Sbjct: 61  GIDENNKEK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAW 120

Query: 121 DPSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGL 180
           DPSFATSKSLTFQAAFFFVSTWISF+VGEILLLIGLSVESGHL +W +PKESCLVIKEGL
Sbjct: 121 DPSFATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGL 180

Query: 181 FSAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR---SPPLQP 240
           FSAAGVF+LATVFLAAGLYMTAVRAQR+FE Q NVRREVLESYHIHSSPPR   SPPLQP
Sbjct: 181 FSAAGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQP 240

Query: 241 MPPIAREDPVIRHS-HHPE-SPFLFLLPSSAAFCK 270
           MPPIAREDPVIRHS HH E +PF  LL S+A FCK
Sbjct: 241 MPPIAREDPVIRHSQHHQERAPFWSLLQSTAPFCK 273

[Close]

BLAST of CmaCh00G004260 vs. NCBI nr
Match: gi|659076902|ref|XP_008438924.1| (PREDICTED: uncharacterized protein LOC103483879 [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 1.9e-120
Identity = 232/278 (83.45%), Postives = 249/278 (89.57%), Query Frame = 1


Query: 1   MGRRKA--MAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIW 60
           MGRR+    AVTH+DL PS +SSELGSK+GTFLIILT+LCGLCCFILCL+AESTRSQ IW
Sbjct: 1   MGRRRKNMAAVTHDDLLPSPKSSELGSKLGTFLIILTILCGLCCFILCLIAESTRSQAIW 60

Query: 61  MGRDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIA 120
           MG DENN +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIA
Sbjct: 61  MGIDENNKEK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIA 120

Query: 121 WDPSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEG 180
           WDPSFATSKSLTFQAAFFFVSTWISF+VGEILLLIGLSVESGHL +W +PKESCLVIKEG
Sbjct: 121 WDPSFATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSAPKESCLVIKEG 180

Query: 181 LFSAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR-----SPP 240
           LFSAAGVF+LATVFLAAGLYMTAVRAQR+FE Q NVRREVLESYHIHSSPPR     SPP
Sbjct: 181 LFSAAGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSLASPP 240

Query: 241 LQPMPPIAREDPVIRHSHHPE--SPFLFLLPSSAAFCK 270
           LQPMPPIAREDPVIRHSHH +  +PF  LL S+A FCK
Sbjct: 241 LQPMPPIAREDPVIRHSHHHQDRAPFWSLLQSTAPFCK 276

[Close]

BLAST of CmaCh00G004260 vs. NCBI nr
Match: gi|700202016|gb|KGN57149.1| (hypothetical protein Csa_3G165660 [Cucumis sativus])

HSP 1 Score: 439.9 bits (1130), Expect = 3.3e-120
Identity = 231/268 (86.19%), Postives = 246/268 (91.79%), Query Frame = 1


Query: 7   MAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDENNN 66
           MAVTH+DL PS +SSELGSKMGTFLIILT+LCGLCCFILCL+AE+TRSQVIWMG DENN 
Sbjct: 1   MAVTHDDLLPSPKSSELGSKMGTFLIILTILCGLCCFILCLIAETTRSQVIWMGIDENNK 60

Query: 67  KKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFATS 126
           +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPALIAWDPSFATS
Sbjct: 61  EK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPALIAWDPSFATS 120

Query: 127 KSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAAGVF 186
           KSLTFQAAFFFVSTWISF+VGEILLLIGLSVESGHL +W +PKESCLVIKEGLFSAAGVF
Sbjct: 121 KSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVIKEGLFSAAGVF 180

Query: 187 ELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR---SPPLQPMPPIARE 246
           +LATVFLAAGLYMTAVRAQR+FE Q NVRREVLESYHIHSSPPR   SPPLQPMPPIARE
Sbjct: 181 QLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSPPLQPMPPIARE 240

Query: 247 DPVIRHS-HHPE-SPFLFLLPSSAAFCK 270
           DPVIRHS HH E +PF  LL S+A FCK
Sbjct: 241 DPVIRHSQHHQERAPFWSLLQSTAPFCK 266

[Close]

BLAST of CmaCh00G004260 vs. NCBI nr
Match: gi|778679010|ref|XP_011651070.1| (PREDICTED: uncharacterized protein LOC101213882 isoform X2 [Cucumis sativus])

HSP 1 Score: 354.8 bits (909), Expect = 1.4e-94
Identity = 189/219 (86.30%), Postives = 199/219 (90.87%), Query Frame = 1


Query: 56  VIWMGRDENNNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPA 115
           VIWMG DENN +K  +RC YSGSGKTPL+CTASAFLGMAVMMVVQHLYVLIAVSKS PPA
Sbjct: 18  VIWMGIDENNKEK--RRCSYSGSGKTPLLCTASAFLGMAVMMVVQHLYVLIAVSKSAPPA 77

Query: 116 LIAWDPSFATSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVI 175
           LIAWDPSFATSKSLTFQAAFFFVSTWISF+VGEILLLIGLSVESGHL +W +PKESCLVI
Sbjct: 78  LIAWDPSFATSKSLTFQAAFFFVSTWISFAVGEILLLIGLSVESGHLNNWSTPKESCLVI 137

Query: 176 KEGLFSAAGVFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPR---SP 235
           KEGLFSAAGVF+LATVFLAAGLYMTAVRAQR+FE Q NVRREVLESYHIHSSPPR   SP
Sbjct: 138 KEGLFSAAGVFQLATVFLAAGLYMTAVRAQRMFEQQENVRREVLESYHIHSSPPRSLSSP 197

Query: 236 PLQPMPPIAREDPVIRHS-HHPE-SPFLFLLPSSAAFCK 270
           PLQPMPPIAREDPVIRHS HH E +PF  LL S+A FCK
Sbjct: 198 PLQPMPPIAREDPVIRHSQHHQERAPFWSLLQSTAPFCK 234

[Close]

BLAST of CmaCh00G004260 vs. NCBI nr
Match: gi|1009163462|ref|XP_015899982.1| (PREDICTED: uncharacterized protein LOC107433234 [Ziziphus jujuba])

HSP 1 Score: 328.6 bits (841), Expect = 1.1e-86
Identity = 165/261 (63.22%), Postives = 211/261 (80.84%), Query Frame = 1


Query: 5   KAMAVTHEDLHPSRRSSELGSKMGTFLIILTVLCGLCCFILCLVAESTRSQVIWMGRDEN 64
           K MAVTH DL P R S+ LGSK+G FLI+LT+LCGL CFILCL+AE+TRS++ W+G  ++
Sbjct: 3   KTMAVTHADLEPKRSSTNLGSKIGAFLIVLTILCGLFCFILCLIAEATRSELTWVGASDH 62

Query: 65  NNKKGEKRCWYSGSGKTPLVCTASAFLGMAVMMVVQHLYVLIAVSKSPPPALIAWDPSFA 124
                +  C YSGSGKTPL+C ASAF+G+A++MVV+H Y+LIAVSKSPP AL++WDP  A
Sbjct: 63  KGNGRKSECVYSGSGKTPLLCAASAFMGLAIVMVVEHTYMLIAVSKSPPSALLSWDPDSA 122

Query: 125 TSKSLTFQAAFFFVSTWISFSVGEILLLIGLSVESGHLKDWWSPKESCLVIKEGLFSAAG 184
           +++SL FQA FFFVSTWI FSVGEILLLIGLSVESGHLK+W  P++SCL+I+EGLFSAAG
Sbjct: 123 SARSLAFQAGFFFVSTWICFSVGEILLLIGLSVESGHLKNWSRPRQSCLIIREGLFSAAG 182

Query: 185 VFELATVFLAAGLYMTAVRAQRLFEDQVNVRREVLESYHIHSSPPRSPPLQPMPPIARED 244
           VF LA+VFLAAGLY+T +RA++L +DQ NVRREVLE+  +++SPP SP +  M   ARE+
Sbjct: 183 VFALASVFLAAGLYLTTLRAEKLSQDQENVRREVLEASALYASPPTSPIITTM---AREN 242

Query: 245 PVIRHSHHPESP-FLFLLPSS 265
           P+ R ++  E+P F+F L  S
Sbjct: 243 PLFRENNQIENPSFVFPLAYS 260

The following BLAST results are available for this feature:

BLAST of CmaCh00G004260 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh00G004260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L805_CUCSA	2.3e-120	86.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G165660 PE=4 SV=1	[more]
V4U0C6_9ROSI	6.5e-83	60.30	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007083mg PE=4 SV=1	[more]
A0A061ENR4_THECC	8.5e-83	63.49	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_021309 PE=4 SV=1	[more]
W9QW85_9ROSA	2.5e-82	59.46	Uncharacterized protein OS=Morus notabilis GN=L484_007751 PE=4 SV=1	[more]
A0A067FWV7_CITSI	2.5e-82	59.55	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035800mg PE=4 SV=1	[more]

BLAST of CmaCh00G004260 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49320.1	7.9e-72	56.38	Protein of unknown function (DUF1218)	[more]

BLAST of CmaCh00G004260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449433425\|ref\|XP_004134498.1\|	1.7e-121	85.82	PREDICTED: uncharacterized protein LOC101213882 isoform X1 [Cucumis sativus]	[more]
gi\|659076902\|ref\|XP_008438924.1\|	1.9e-120	83.45	PREDICTED: uncharacterized protein LOC103483879 [Cucumis melo]	[more]
gi\|700202016\|gb\|KGN57149.1\|	3.3e-120	86.19	hypothetical protein Csa_3G165660 [Cucumis sativus]	[more]
gi\|778679010\|ref\|XP_011651070.1\|	1.4e-94	86.30	PREDICTED: uncharacterized protein LOC101213882 isoform X2 [Cucumis sativus]	[more]
gi\|1009163462\|ref\|XP_015899982.1\|	1.1e-86	63.22	PREDICTED: uncharacterized protein LOC107433234 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009606	DUF1218

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G004260.1	CmaCh00G004260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Protein of unknown function DUF1218	PFAM	PF06749	DUF1218	coord: 89..191 score: 8.5
None	No IPR available	PANTHER	PTHR31769	FAMILY NOT NAMED	coord: 14..259 score: 2.8E
None	No IPR available	PANTHER	PTHR31769:SF2	SUBFAMILY NOT NAMED	coord: 14..259 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh00G004260	Cucurbita moschata (Rifu)	cmacmoB009
CmaCh00G004260	Cucurbita moschata (Rifu)	cmacmoB016
CmaCh00G004260	Wild cucumber (PI 183967)	cmacpiB001
CmaCh00G004260	Cucumber (Chinese Long) v2	cmacuB000
CmaCh00G004260	Melon (DHL92) v3.5.1	cmameB001
CmaCh00G004260	Watermelon (Charleston Gray)	cmawcgB001
CmaCh00G004260	Watermelon (97103) v1	cmawmB002
CmaCh00G004260	Cucurbita pepo (Zucchini)	cmacpeB006
CmaCh00G004260	Cucurbita pepo (Zucchini)	cmacpeB017
CmaCh00G004260	Bottle gourd (USVL1VR-Ls)	cmalsiB002
CmaCh00G004260	Cucumber (Gy14) v2	cgybcmaB274
CmaCh00G004260	Silver-seed gourd	carcmaB1303
CmaCh00G004260	Melon (DHL92) v3.6.1	cmamedB001
CmaCh00G004260	Silver-seed gourd	carcmaB0390
CmaCh00G004260	Cucumber (Chinese Long) v3	cmacucB0001
CmaCh00G004260	Watermelon (97103) v2	cmawmbB001
CmaCh00G004260	Wax gourd	cmawgoB0001
CmaCh00G004260	Cucurbita maxima (Rimu)	cmacmaB013
CmaCh00G004260	Cucurbita maxima (Rimu)	cmacmaB020
CmaCh00G004260	Cucumber (Gy14) v1	cgycmaB0706